Pregenerated sensors for CNGB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056494Ensembl transcript IDs: ENSMUST00000102999.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTCCAGCATGTTGCTGCAATCTGATTTTGCCATAGTGGGATGCTaGCAACTGGTTTTGCCATGTGAAGTAGCATCTGCAAGGCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: SSSMLLQSDFAIVGC*QLVLPCEVASARLG Trigger: CCCTAGCCTTGCAGATGCTACTTCACATGGCAAAACCAGTTGGCAGCATCCCACTATGGCAAAATCAGATTGCAGCAACATGCTGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR TCA 90 bp | AAGTGTAAGAGATGGATTTATTCTGGGGAGAAATATGAGGTCCCATaGTATGGGTCACCTCAAATTCTATTTTCCAAGGTGGCTGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: KCKRWIYSGEKYEVP*YGSPQILFSKVAEV Trigger: AACTTCAGCCACCTTGGAAAATAGAATTTGAGGTGACCCATATCATGGGACCTCATATTTCTCCCCAGAATAAATCCATCTCTTACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR CCA 90 bp | TGTAATTGCGATCTGGATGTGCAGAGCCAACCACTTCACAATTATTaGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: CNCDLDVQSQPLHNY*IANQSFSFYRHSFF Trigger: AAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTGGTTGGCTCTGCACATCCAGATCGCAATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR TCA 90 bp | AGTAAGATGAGTCTACCTTGGACAGAAGAGTCTACTTTGGACATTTaGACAAAGTGCTTTGCCAGAAATTATATACCACAAAAATGTAAG | + |
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Preference number: 1 (lower is better) Translates to: SKMSLPWTEESTLDI*TKCFARNYIPQKCK Trigger: CTTACATTTTTGTGGTATATAATTTCTGGCAAAGCACTTTGTTCAAATGTCCAAAGTAGACTCTTCTGTCCAAGGTAGACTCATCTTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR TCA 90 bp | ATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATGAACCTTTTCATACATCCTGCACGTCACAGGGGTaGGGCTCTAAGAGGCCGGGG | + |
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Preference number: 2 (lower is better) Translates to: MTFLAVGLVEANEPFHTSCTSQG*GSKRPG Trigger: CCCCGGCCTCTTAGAGCCTCACCCCTGTGACGTGCA...GGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTCTACTCTGCATCTGTTaGGCCAGCAGAGCTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSEVSGELPQVDLTNLKVLLCIC*ASRASL Trigger: CAGACTAGCTCTGCTGGCCCAACAGATGCAGAGTAG...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR CAA 90 bp | ATAGTCTTATTGATGAATCCAACTCCTGGAAATGAAGCTAAGGATTaGCCTGCAGTTTCCCAGGGTCCCAGTGAGGTTAGTTTCCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: IVLLMNPTPGNEAKD*PAVSQGPSEVSFPH Trigger: ATGAGGGAAACTAACCTCACTGGGACCCTGGGAAACTGCAGGCAAATCCTTAGCTTCATTTCCAGGAGTTGGATTCATCAATAAGACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTCATCCGTCAGCAGAGTaGAGCTTCAAATATTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LSEVSGELPQVDLTNLKVHPSAE*SFKYSC Trigger: ACAGGAATATTTGAAGCTTCACTCTGCTGACGGATG...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGATTTGCCTGCAGTTTCCCAGGGTCCCAGTGAGGTTAGTTTCCCTCATTTTCCAGGAATCTCTTTaGGAATTAGCTAGATTACAT | + |
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Preference number: 2 (lower is better) Translates to: LRICLQFPRVPVRLVSLIFQESL*ELARLH Trigger: ATGTAATCTAGCTAATTCCCAAAGAGATTCCTGGAA...AATGAGGGAAACTAACCTCACTGGGACCCTGGGAAACTGCAGGCAAATCCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR CAA 90 bp | ATTGCGATCTGGATGTGCAGAGCCAACCACTTCACAATTATTGGATaGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: IAIWMCRANHFTIIG*LTSHLAFIGTASFQ Trigger: CTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTGGTTGGCTCTGCACATCCAGATCGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTAACTGCCTATTTAATTaGTTGGGACATTTCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPNCLFN*LGHFLH Trigger: GTGGAGGAAATGTCCCAATCAATTAAATAGGCAGTT...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTGACATTGACTTCGAGTaGAAATCAGAGTTCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: PKALSNTRIPIWHLLKEADIDFE*KSEFSF Trigger: GAATGAGAACTCTGATTTTCACTCGAAGTCAATGTC...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTGACAGTTTCTTACAATaGAAAGGGACTGTGACTCTA | + |
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Preference number: 2 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPDSFLQ*KGTVTL Trigger: TAGAGTCACAGTCCCTTTGCATTGTAAGAAACTGTC...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATGAACCTTTTCATACATCCTTTCTTGCAATGGTCTaGTTGAAAAGGATATCATCC | + |
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Preference number: 2 (lower is better) Translates to: MTFLAVGLVEANEPFHTSFLAMV*LKRISS Trigger: GGATGATATCCTTTTCAACCAGACCATTGCAAGAAA...GGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTACTAGAATTCCTATCTaGCACCTTTTGAAGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LSEVSGELPQVDLTNLKVTRIPI*HLLKEA Trigger: AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGT...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR CAA 90 bp | AAATCCTCCTCACAATGTGCTATTATGATAGCCTTCTTCTGGGACTaGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTAATG | + |
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Preference number: 2 (lower is better) Translates to: KSSSQCAIMIAFFWD*ETAILHGIQHSILM Trigger: CATTAGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAGGCTATCATAATAGCACATTGTGAGGAGGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAGGACCTTTTGTTCTATCTGGCACCTTTTaGAGGAAGCTAATGTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: ANQSFSFYRHSFFPGPFVLSGTF*RKLMFK Trigger: CTTAAACATTAGCTTCCTTCAAAAGGTGCCAGATAG...AACAAAAGGTCCTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTCAGAAGAGTCTACTTTaGACATTTGAACAAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PKALSNTRIPIWHLLKEAQKSLL*TFEQSA Trigger: AGCACTTTGTTCAAATGTCCAAAGTAGACTCTTCTG...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAAAGGAATTTAACCTACTACTCACAAGGATATTAGGTCAGACACAGAGGACAAAGCATGACAGATaGATCCATGTTGTACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: IPKEFNLLLTRILGQTQRTKHDR*IHVVQF Trigger: AAACTGTACAACATGGATGCATCTGTCATGCTTTGT...CCTCTGTGTCTGACCTAATATCCTTGTGAGTAGTAGGTTAAATTCCTTTGGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTACTTTGGACATTTaGACAAAGTGCTTTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: HFTIIGLLTSHLAFIGTASTLDI*TKCFAR Trigger: TCTGGCAAAGCACTTTGTTCAAATGTCCAAAGTAGA...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CCA 90 bp | ATATCTTACCTCGTGTGCTATCTTATTATTCTGGATAAAAAGGTGAAAGCCCCAGCCTATTTAATTGATTaGGACATTTCCTCCACTGTA | + |
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Preference number: 2 (lower is better) Translates to: ISYLVCYLIILDKKVKAPAYLID*DISSTV Trigger: TACAGTGGAGGAAATGTCCCAATCAATTAAATAGGC...TGGGGCTTTCACCTTTTTATCCAGAATAATAAGATAGCACACGAGGTAAGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCAAGTCTACCAAAGTaGAACAAGGATATTTCATCA | + |
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Preference number: 2 (lower is better) Translates to: HFTIIGLLTSHLAFIGTASSLPK*NKDISS Trigger: TGATGAAATATCCTTGTTCCACTTTGGTAGACTTGA...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTCAAATACAAATAATCTaGGAACATAACATCCACGTG | + |
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Preference number: 2 (lower is better) Translates to: HFTIIGLLTSHLAFIGTAQIQII*EHNIHV Trigger: CACGTGGATGTTATGTTCCCAGATTATTTGTATTTG...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | CTAAGGATTTGCCTGCAGTTTCCCAGGGTCCCAGTGAGGTTAGTTTCCCTCATTGCCCTTTTCTTGACTTaGATAGTCAGAATCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LRICLQFPRVPVRLVSLIALFLT*IVRISS Trigger: AGAAGAGATTCTGACTATCAAAGTCAAGAAAAGGGC...AATGAGGGAAACTAACCTCACTGGGACCCTGGGAAACTGCAGGCAAATCCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR GCA 72 bp | ATGTTGCTGCAATCTGATTTTGCCATAGTGGGATGCTaGCAACTGGTTTTGCCATGTGAAGTAGCATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: MLLQSDFAIVGC*QLVLPCEVASA Trigger: TGCAGATGCTACTTCACATGGCAAAACCAGTTGGCAGCATCCCACTATGGCAAAATCAGATTGCAGCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR TCA 72 bp | AAAATGATCCACTTCCTCCAGCATGTTGCTGCAATCTaGTTTTGCCATAGTGGGATGCTGCCAACTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: KMIHFLQHVAAI*FCHSGMLPTGF Trigger: AAAACCAGTTGGCAGCATCCCACTATGGCAAAATCAGATTGCAGCAACATGCTGGAGGAAGTGGATCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAGGACCTTTTGTTAATGAAGCTAAGGATTaGCCTGCAGTTTCCCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: ANQSFSFYRHSFFPGPFVNEAKD*PAVSQG Trigger: ACCCTGGGAAACTGCAGGCAAATCCTTAGCTTCATT...AACAAAAGGTCCTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAGGACCTTTTGTTACTTCCTCCAGCATGTaGCTGCAATCTGATTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: ANQSFSFYRHSFFPGPFVTSSSM*LQSDFA Trigger: GGCAAAATCAGATTGCAGCAACATGCTGGAGGAAGT...AACAAAAGGTCCTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTGTCTACTTTGGACATTaGAACAAAGTGCTTTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PKALSNTRIPIWHLLKEAVYFGH*NKVLCQ Trigger: CTGGCAAAGCACTTTGTTCAAATGTCCAAAGTAGAC...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAGGACCTTTTGTTCTTGCAATGGTCTGGTaGAAAAGGATATCATCCGTC | + |
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Preference number: 3 (lower is better) Translates to: ANQSFSFYRHSFFPGPFVLAMVW*KRISSV Trigger: GACGGATGATATCCTTTTCAACCAGACCATTGCAAG...AACAAAAGGTCCTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR CCA 72 bp | TCCTCCTCACAATGTGCTATTATGATAGCCTTCTTCTaGGACTTGGAAACAGCCATCTTACATGGAATTCAA | + |
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Preference number: 3 (lower is better) Translates to: SSSQCAIMIAFF*DLETAILHGIQ Trigger: TTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAGGCTATCATAATAGCACATTGTGAGGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR CCA 72 bp | GATCTGGATGTGCAGAGCCAACCACTTCACAATTATTaGATTGCTAACCAGTCATTTAGCTTTTATAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: DLDVQSQPLHNY*IANQSFSFYRH Trigger: GTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTGGTTGGCTCTGCACATCCAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTTGCTTAGCCCTTTTCTaGACTTTGATAGTCAGAATC | + |
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Preference number: 3 (lower is better) Translates to: PKALSNTRIPIWHLLKEACLALF*TLIVRI Trigger: GATTCTGACTATCAAAGTCAAGAAAAGGGCTAAGCA...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTGTTAGTGAGGGAACTTaGCTTTTGATTTGGTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: PKALSNTRIPIWHLLKEAVSEGT*LLIWSF Trigger: AAAAGACCAAATCAAAAGCAAAGTTCCCTCACTAAC...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR TCA 72 bp | AATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATaGACCTTTTCATACATCCCAAAGGAATTTAACCTA | + |
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Preference number: 3 (lower is better) Translates to: NDILGCGACGSK*TFSYIPKEFNL Trigger: TAGGTTAAATTCCTTTGGGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR TCA 72 bp | AGATGGATTTATTCTGGGGAGAAATATGAGGTCCCATaGTATGGGTCACCTCAAATTCTATTTTCCAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: RWIYSGEKYEVP*YGSPQILFSKV Trigger: CACCTTGGAAAATAGAATTTGAGGTGACCCATATCATGGGACCTCATATTTCTCCCCAGAATAAATCCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAGGACCTTTTGTTATAATCAAGCACTTATaGCTTAGCCCTTTTCTTGAC | + |
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Preference number: 3 (lower is better) Translates to: ANQSFSFYRHSFFPGPFVIIKHL*LSPFLD Trigger: GTCAAGAAAAGGGCTAAGCAATAAGTGCTTGATTAT...AACAAAAGGTCCTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR TCA 72 bp | ATCCACGTGACAGTTTCTTACAATGCAAAGGGACTGTaGCTCTATGAGGGAGGGAGACTTTTTATAATAATT | + |
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Preference number: 3 (lower is better) Translates to: IHVTVSYNAKGL*LYEGGRLFIII Trigger: AATTATTATAAAAAGTCTCCCTCCCTCATAGAGTCACAGTCCCTTTGCATTGTAAGAAACTGTCACGTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTGAGGGAACTTTGCTTTaGATTTGGTCTTTTGTCTAT | + |
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Preference number: 3 (lower is better) Translates to: HFTIIGLLTSHLAFIGTAEGTLL*IWSFVY Trigger: ATAGACAAAAGACCAAATCAAAAGCAAAGTTCCCTC...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR GCA 90 bp | CTAAGGATTTGCCTGCAGTTTCCCAGGGTCCCAGTGAGGTTAGTTTCCCTCATTCTGATTGGCTGTTGCTaGCCCAATCACATCACGCAT | + |
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Preference number: 4 (lower is better) Translates to: LRICLQFPRVPVRLVSLILIGCC*PNHITH Trigger: ATGCGTGATGTGATTGGGGCAGCAACAGCCAATCAG...AATGAGGGAAACTAACCTCACTGGGACCCTGGGAAACTGCAGGCAAATCCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR CAA 72 bp | TCTGATTTTGCCATAGTGGGATGCTGCCAACTGGTTTaGCCATGTGAAGTAGCATCTGCAAGGCTAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: SDFAIVGCCQLV*PCEVASARLGT Trigger: TGTCCCTAGCCTTGCAGATGCTACTTCACATGGCAAAACCAGTTGGCAGCATCCCACTATGGCAAAATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CCA 90 bp | CTAAGGATTTGCCTGCAGTTTCCCAGGGTCCCAGTGAGGTTAGTTTCCCTCATTTTCAGGGTCAGGATTTaGGGTGAAATCTCTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LRICLQFPRVPVRLVSLIFRVRI*GEISER Trigger: TCTCTCAGAGATTTCACCCCAAATCCTGACCCTGAA...AATGAGGGAAACTAACCTCACTGGGACCCTGGGAAACTGCAGGCAAATCCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| 3UTR CAA 72 bp | TTGATGAATCCAACTCCTGGAAATGAAGCTAAGGATTaGCCTGCAGTTTCCCAGGGTCCCAGTGAGGTTAGT | + |
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Preference number: 4 (lower is better) Translates to: LMNPTPGNEAKD*PAVSQGPSEVS Trigger: ACTAACCTCACTGGGACCCTGGGAAACTGCAGGCAAATCCTTAGCTTCATTTCCAGGAGTTGGATTCATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR GCA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTTTGGCTGAGAAAGACTaGTCAGGTTGGGGCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: PKALSNTRIPIWHLLKEALAEKD*SGWGRV Trigger: AACTCTGCCCCAACCTGAGCAGTCTTTCTCAGCCAA...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR GCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTGTTCTGATTGGCTGTTaGTGCCCCAATCACATCACG | + |
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Preference number: 4 (lower is better) Translates to: LSEVSGELPQVDLTNLKVVLIGC*CPNHIT Trigger: CGTGATGTGATTGGGGCAGCAACAGCCAATCAGAAC...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR GCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTAGGGCAATAGACAACTaGATTGCTGTCGGGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LSEVSGELPQVDLTNLKVRAIDN*IAVGRF Trigger: GAACCTCCCGACAGCAATGCAGTTGTCTATTGCCCT...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTTGTCTCCCTGTGCTATaGTTGGCTGAGAAAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSEVSGELPQVDLTNLKVCLPVL*LAEKDC Trigger: GCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACA...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTAGATTGGCAAATCCGTaGGCCACAACATCAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPRLANP*ATTSAV Trigger: GACAGCTGATGTTGTGGCCCACGGATTTGCCAATCT...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| 3UTR CAA 72 bp | AGTCTAGCAGTTTTGGCCTCTTCCCAGCATGTAACTTaGGTAATTGTCTCCGTGCTAAGTGAAGTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLAVLASSQHVT*VIVSVLSEVSG Trigger: TCCTGAGACTTCACTTAGCACGGAGACAATTACCAAAGTTACATGCTGGGAAGAGGCCAAAACTGCTAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTGGAAGTAGTTCTGATTaGCTGTTGCTGCCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPGSSSD*LLLPQS Trigger: TGATTGGGGCAGCAACAGCCAATCAGAACTACTTCC...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTGGGTGTCTCTTCTTTTaGTGGGAAAAGAAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPGCLFF*WEKKGR Trigger: CCTGCCTTTCTTTTCCCACCAAAAGAAGAGACACCC...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTGTGACTTTTCAAATGTaGTTGGTGTCCTGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKALSNTRIPIWHLLKEAVTFQM*LVSCSS Trigger: TGAGGAGCAGGACACCAATCACATTTGAAAAGTCAC...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | GCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAGGACCTTTTGTTGGACTCTCTGGGGTTTaGAAGAAAACGTGTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ANQSFSFYRHSFFPGPFVGLSGV*KKTCLG Trigger: ACCAAGACACGTTTTCTTTCAAACCCCAGAGAGTCC...AACAAAAGGTCCTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTAGAGTAACCAGAACTTaGGCACCATCAGGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFTIIGLLTSHLAFIGTARVTRT*APSGPP Trigger: TGGAGGCCCTGATGGTGCTCAAGTTCTGGTTACTCT...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR GCA 90 bp | ATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATGAACCTTTTCATACATCCATCATTCTTCGTAGGTaGTCTTTTACTGGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MTFLAVGLVEANEPFHTSIILRR*SFTGTL Trigger: GAGAGTCCCAGTAAAAGAGCACCTACGAAGAATGAT...GGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTCTTTTCAAATGTGATTaGTGTCCTGCTCCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKALSNTRIPIWHLLKEALFKCD*CPAPQR Trigger: CCTCTGAGGAGCAGGACACCAATCACATTTGAAAAG...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | ATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATGAACCTTTTCATACATCCTTTACTGGGACTCTCTaGGGTTTGAAAGAAAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: MTFLAVGLVEANEPFHTSFTGTL*GLKENV Trigger: CACGTTTTCTTTCAAACCCCAGAGAGTCCCAGTAAA...GGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | ATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATGAACCTTTTCATACATCCCCTCCTCTTACAAATTaGAGTCTTGGCTGGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MTFLAVGLVEANEPFHTSPPLTN*SLGWIN Trigger: ATTGATCCAGCCAAGACTCCAATTTGTAAGAGGAGG...GGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTCCAGAGTTAAAAGATTaGCAAATCCGTGGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPPELKD*QIRGPQ Trigger: TTGTGGCCCACGGATTTGCCAATCTTTTAACTCTGG...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTCGATACTGCACACTCTaGGGAATAGAGTATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSEVSGELPQVDLTNLKVRYCTL*GIEYLF Trigger: GAACAAATACTCTATTCCTCAGAGTGTGCAGTATCG...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTATTTCCTCCTCCTTTTaGCAGAAGGCTTATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSEVSGELPQVDLTNLKVISSSF*QKAYFS Trigger: GGAGAAATAAGCCTTCTGGCAAAAGGAGGAGGAAAT...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTGGTTCTTTTTCACTTTaGTTGTCTCCCTGTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: PKALSNTRIPIWHLLKEAGSFSL*LSPCAM Trigger: CATAGCACAGGGAGACAACCAAAGTGAAAAAGAACC...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | ATATCTTACCTCGTGTGCTATCTTATTATTCTGGATAAAAAGGTGAAAGCCCCACAGGGATTGCCTGAGTaGTCTTTCCCTTCTGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ISYLVCYLIILDKKVKAPQGLPE*SFPSGL Trigger: TAAGCCAGAAGGGAAAGACCACTCAGGCAATCCCTG...TGGGGCTTTCACCTTTTTATCCAGAATAATAAGATAGCACACGAGGTAAGATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| 3UTR CAA 72 bp | TGGATGTGCAGAGCCAACCACTTCACAATTATTGGATaGCTAACCAGTCATTTAGCTTTTATAGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WMCRANHFTIIG*LTSHLAFIGTA Trigger: AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTGGTTGGCTCTGCACATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTATAGACCCATTTAGTTaGGCCAATTCCTTCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPIDPFS*ANSFIV Trigger: GACTATGAAGGAATTGGCTCAACTAAATGGGTCTAT...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTCAATTTCTCCCTTTTTaGAGACAAAGTCACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PKALSNTRIPIWHLLKEAQFLPF*RQSHQV Trigger: TACCTGGTGACTTTGTCTGCAAAAAGGGAGAAATTG...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTGTAGTTCTTGTTATCTaGTGTTTGGCATGGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPVVLVI*CLAWKD Trigger: GTCTTTCCATGCCAAACACCAGATAACAAGAACTAC...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCAAAGGAATTTAACCTACTACTCACAAGGATATTAGGTCAGACACAGAGGGTCTTCTTTGCTGTGTaGCTTTTCAAATGTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPKEFNLLLTRILGQTQRVFFAV*LFKCDW Trigger: CCAATCACATTTGAAAAGTCACACAGCAAAGAAGAC...CCTCTGTGTCTGACCTAATATCCTTGTGAGTAGTAGGTTAAATTCCTTTGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTCCTCTTCAGCTCATTTaGATCTACAATAATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPPLQLI*IYNNFS Trigger: GGAGAAATTATTGTAGATTCAAATGAGCTGAAGAGG...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTGTTCATGTAGGCAATaGTATGGTCCATGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFTIIGLLTSHLAFIGTACSCRQ*YGPCRL Trigger: AAGCCTGCATGGACCATATCATTGCCTACATGAACA...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR GCA 90 bp | ATATCTTACCTCGTGTGCTATCTTATTATTCTGGATAAAAAGGTGAAAGCCCCAGAGAGTTTTCCCCAGTaGTGTTGTCTTCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISYLVCYLIILDKKVKAPESFPQ*CCLLCC Trigger: ACAGCAAAGAAGACAACAGCACTGGGGAAAACTCTC...TGGGGCTTTCACCTTTTTATCCAGAATAATAAGATAGCACACGAGGTAAGATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTGACTCTGTAGACATATaGTTTGTCCATTATAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSEVSGELPQVDLTNLKVDSVDI*FVHYRL Trigger: GAGTCTATAATGGACAAAGCATATGTCTACAGAGTC...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAAAGGAATTTAACCTACTACTCACAAGGATATTAGGTCAGACACAGAGGTGCAGCAGAATTTCTTaGAGAGTCTTTTTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPKEFNLLLTRILGQTQRCSRIS*RVFLSR Trigger: TCTGGACAAAAAGACTCTCCAAGAAATTCTGCTGCA...CCTCTGTGTCTGACCTAATATCCTTGTGAGTAGTAGGTTAAATTCCTTTGGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| 3UTR CAA 72 bp | GGCCGGGGTACAGTTGTTAGTGAGGGAACTTTGCTTTaGATTTGGTCTTTTGTCTATAAGCTTGCTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGTVVSEGTLL*IWSFVYKLAIF Trigger: AAAAATAGCAAGCTTATAGACAAAAGACCAAATCAAAAGCAAAGTTCCCTCACTAACAACTGTACCCCGGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| 3UTR CAA 72 bp | TCACAATGTGCTATTATGATAGCCTTCTTCTGGGACTaGGAAACAGCCATCTTACATGGAATTCAACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQCAIMIAFFWD*ETAILHGIQHS Trigger: GGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAGGCTATCATAATAGCACATTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTAAAGAAAACGTGTCTTaGTGTTCTTTTAGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSEVSGELPQVDLTNLKVKENVS*CSFSLE Trigger: TTCCAAGCTAAAAGAACACCAAGACACGTTTTCTTT...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| 3UTR CAA 72 bp | GAGTCTACCTTGGACAGAAGAGTCTACTTTGGACATTaGAACAAAGTGCTTTGCCAGAAATTATATACCACA | + |
|
Preference number: 4 (lower is better) Translates to: ESTLDRRVYFGH*NKVLCQKLYTT Trigger: TGTGGTATATAATTTCTGGCAAAGCACTTTGTTCAAATGTCCAAAGTAGACTCTTCTGTCCAAGGTAGACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR GCA 90 bp | ATATCTTACCTCGTGTGCTATCTTATTATTCTGGATAAAAAGGTGAAAGCCCCATATATTTGTAGACATTaGAGTCTGAGAGCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISYLVCYLIILDKKVKAPYICRH*SLRAGF Trigger: GAAGCCAGCTCTCAGACTGCAATGTCTACAAATATA...TGGGGCTTTCACCTTTTTATCCAGAATAATAAGATAGCACACGAGGTAAGATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| 3UTR CAA 72 bp | CATACATTGATTATAACAGAAGTGGAAAAATCTCTGTaGAAGTTCCTACCAAATGACATTCTTGGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTLIITEVEKSL*KFLPNDILGCG Trigger: CCCACAGCCAAGAATGTCATTTGGTAGGAACTTCAACAGAGATTTTTCCACTTCTGTTATAATCAATGTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | ATATCTTACCTCGTGTGCTATCTTATTATTCTGGATAAAAAGGTGAAAGCCCCATATCACAAAGGTAGATaGTATCACATACGATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISYLVCYLIILDKKVKAPYHKGR*YHIRCQ Trigger: CTGACATCGTATGTGATATCATCTACCTTTGTGATA...TGGGGCTTTCACCTTTTTATCCAGAATAATAAGATAGCACACGAGGTAAGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR TCA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTAATTCCTTCATAGTCTaGAGCCCAGTAATAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: HFTIIGLLTSHLAFIGTANSFIV*SPVINT Trigger: TGTGTTTATTACTGGGCTTCAGACTATGAAGGAATT...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | ATATCTTACCTCGTGTGCTATCTTATTATTCTGGATAAAAAGGTGAAAGCCCCAGGTGTTCTTTTAGCTTaGAATTGTTCTCTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISYLVCYLIILDKKVKAPGVLLA*NCSLVL Trigger: CAAAACAAGAGAACAATTCCAAGCTAAAAGAACACC...TGGGGCTTTCACCTTTTTATCCAGAATAATAAGATAGCACACGAGGTAAGATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CCA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTGAGCTTTTTAGAAGTTaGATAATGCAGCAGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFTIIGLLTSHLAFIGTAELFRS*IMQQNF Trigger: GAAATTCTGCTGCATTATCCAACTTCTAAAAAGCTC...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| 3UTR CAA 72 bp | CAGAAGAGTCTACTTTGGACATTTGAACAAAGTGCTTaGCCAGAAATTATATACCACAAAAATGTAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSLLWTFEQSA*PEIIYHKNVSR Trigger: CCTGCTTACATTTTTGTGGTATATAATTTCTGGCAAAGCACTTTGTTCAAATGTCCAAAGTAGACTCTTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS TCA 90 bp | CGAGGCGCACTGGTAGCAGCCAACAGTTCCAGTTATACGCAATGGTaGCAAGCAGGAGCCACAAGAGATAGACCCGATCTGTGTAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGALVAANSSSYTQW*QAGATRDRPDLCRS Trigger: ACTCCTACACAGATCGGGTCTATCTCTTGTGGCTCCTGCTTGTCACCATTGCGTATAACTGGAACTGTTGGCTGCTACCAGTGCGCCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGGATTTGCCTGCAGTTTCCCAGGGTCCCAGTGAGGTTAGTTTCCCTCATTCAGAGTAACCAGAACTaGAGCACCATCAGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRICLQFPRVPVRLVSLIQSNQN*STIRAS Trigger: GGAGGCCCTGATGGTGCTCAAGTTCTGGTTACTCTG...AATGAGGGAAACTAACCTCACTGGGACCCTGGGAAACTGCAGGCAAATCCTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS GCA 90 bp | TTTCACTTTGGTTGTCTCCCTGTGCTATGGTTGGCTGAGAAAGACTaGTCAGGTTGGGGCAGAGTTTCTTCTCCATTCTCCCTTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: FHFGCLPVLWLAEKD*SGWGRVSSPFSLPW Trigger: CCATGGAAGGGAGAATGGAGAAGAAACTCTGCCCCAACCTGAGCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACAACCAAAGTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS CCA 90 bp | CCTCAGAGGTTCTTTTTCACTTTGGTTGTCTCCCTGTGCTATGGTTaGCTGAGAAAGACTGCTCAGGTTGGGGCAGAGTTTCTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQRFFFTLVVSLCYG*LRKTAQVGAEFLLH Trigger: ATGGAGAAGAAACTCTGCCCCAACCTGAGCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACAACCAAAGTGAAAAAGAACCTCTGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS CCA 90 bp | TGCTCCTCAGAGGTTCTTTTTCACTTTGGTTGTCTCCCTGTGCTATaGTTGGCTGAGAAAGACTGCTCAGGTTGGGGCAGAGTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSEVLFHFGCLPVL*LAEKDCSGWGRVSS Trigger: AGAAGAAACTCTGCCCCAACCTGAGCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACAACCAAAGTGAAAAAGAACCTCTGAGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS CCA 90 bp | TGCCATTGTTCTGGTGAGTTCTGCTCGACATTCAGGGTCAGGATTTaGGGTGAAATCTCTGAGAGAGTTTTCCCCAGTGCTGTTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CHCSGEFCSTFRVRI*GEISERVFPSAVVF Trigger: GAAGACAACAGCACTGGGGAAAACTCTCTCAGAGATTTCACCCCAAATCCTGACCCTGAATGTCGAGCAGAACTCACCAGAACAATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGGATTTGCCTGCAGTTTCCCAGGGTCCCAGTGAGGTTAGTTTCCCTCATTTCCAGAGTTAAAAGATaGGCAAATCCGTGGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LRICLQFPRVPVRLVSLISRVKR*ANPWAT Trigger: TGTGGCCCACGGATTTGCCAATCTTTTAACTCTGGA...AATGAGGGAAACTAACCTCACTGGGACCCTGGGAAACTGCAGGCAAATCCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS-3UTR CAA 90 bp | GCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAGGACCTTTTGTTAGGCAGGTCCTGGTCTaGCAGGGATTGCCTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANQSFSFYRHSFFPGPFVRQVLV*QGLPEW Trigger: CCACTCAGGCAATCCCTGCAAGACCAGGACCTGCCT...AACAAAAGGTCCTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
||
| CDS TCA 90 bp | AGAGGTTCTTTTTCACTTTGGTTGTCTCCCTGTGCTATGGTTGGCTaGGAAAGACTGCTCAGGTTGGGGCAGAGTTTCTTCTCCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGSFSLWLSPCAMVG*ERLLRLGQSFFSIL Trigger: GAGAATGGAGAAGAAACTCTGCCCCAACCTGAGCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACAACCAAAGTGAAAAAGAACCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS GCA 90 bp | AAAGCTGACTGGCCTTTCTTTCCCAGTCCTAGTTTTCTCCATCTCTaGCATTGTTCTGGTGAGTTCTGCTCGACATTCAGGGTCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: KADWPFFPSPSFLHL*HCSGEFCSTFRVRI Trigger: AATCCTGACCCTGAATGTCGAGCAGAACTCACCAGAACAATGGCAGAGATGGAGAAAACTAGGACTGGGAAAGAAAGGCCAGTCAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CCA 90 bp | GCAGCAGAATTTCTTGGAGAGTCTTTTTGTCCAGAGTTAAAAGATTaGCAAATCCGTGGGCCACAACATCAGCTGTCCGGCGATTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAEFLGESFCPELKD*QIRGPQHQLSGDFL Trigger: GAGGAAATCGCCGGACAGCTGATGTTGTGGCCCACGGATTTGCCAATCTTTTAACTCTGGACAAAAAGACTCTCCAAGAAATTCTGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | ATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATGAACCTTTTCATACATCCAGGGCCTCCAAGGACTaGGACTTCTCCGTGTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MTFLAVGLVEANEPFHTSRASKD*DFSVFD Trigger: ATCAAACACGGAGAAGTCCAAGTCCTTGGAGGCCCT...GGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | ATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATGAACCTTTTCATACATCCATGGTCCATGCAGGCTaGGAAGTAGTTCTGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MTFLAVGLVEANEPFHTSMVHAG*EVVLIG Trigger: GCCAATCAGAACTACTTCCAAGCCTGCATGGACCAT...GGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS GCA 90 bp | ACCTTGTCGATGATACTGAAGTTTATGTCAAGGGCAATAGACAACTaGATTGCTGTCGGGAGGTTCTCAAGCAAGTTGGACTCATCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLSMILKFMSRAIDN*IAVGRFSSKLDSSR Trigger: CCTAGATGAGTCCAACTTGCTTGAGAACCTCCCGACAGCAATGCAGTTGTCTATTGCCCTTGACATAAACTTCAGTATCATCGACAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | GCTAACCAGTCATTTAGCTTTTATAGGCACAGCTTCTTTCCAGGACCTTTTGTTGAAAGACTGCTCAGGTaGGGGCAGAGTTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ANQSFSFYRHSFFPGPFVERLLR*GQSFFS Trigger: GGAGAAGAAACTCTGCCCCAACCTGAGCAGTCTTTC...AACAAAAGGTCCTGGAAAGAAGCTGTGCCTATAAAAGCTAAATGACTGGTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTGGGACTCTCTGGGGTTaGAAAGAAAACGTGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKALSNTRIPIWHLLKEAGTLWG*KENVSW Trigger: CCAAGACACGTTTTCTTTCAAACCCCAGAGAGTCCC...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTGGGGTGTCTCTTCTTTaGGTGGGAAAAGAAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPGVSLL*VGKERQ Trigger: CTGCCTTTCTTTTCCCACCAAAAGAAGAGACACCCC...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTTTTTCCCCAGTGCTGTaGTCTTCTTTGCTGTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSEVSGELPQVDLTNLKVFSPVL*SSLLCD Trigger: GTCACACAGCAAAGAAGACAACAGCACTGGGGAAAA...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CCTAAGGCTTTAAGCAACACTAGAATTCCTATCTGGCACCTTTTGAAGGAAGCTTCTTTTTCACTTTGGTaGTCTCCCTGTGCTATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PKALSNTRIPIWHLLKEASFSLW*SPCAMV Trigger: AACCATAGCACAGGGAGACAACCAAAGTGAAAAAGA...AGCTTCCTTCAAAAGGTGCCAGATAGGAATTCTAGTGTTGCTTAAAGCCTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTAGGTTCTTTTTCACTTaGGTTGTCTCCCTGTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPRFFFT*VVSLCY Trigger: ATAGCACAGGGAGACAACCAAAGTGAAAAAGAACCT...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | ATCCCAAAGGAATTTAACCTACTACTCACAAGGATATTAGGTCAGACACAGAGGATTCTTTCCACTAGGTaGTGTAGGTGGGCATCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IPKEFNLLLTRILGQTQRILSTR*CRWASV Trigger: TACTGATGCCCACCTACACAACCTAGTGGAAAGAAT...CCTCTGTGTCTGACCTAATATCCTTGTGAGTAGTAGGTTAAATTCCTTTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | ATCCCAAAGGAATTTAACCTACTACTCACAAGGATATTAGGTCAGACACAGAGGTCCTCCTCTTACAAATaGGAGTCTTGGCTGGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: IPKEFNLLLTRILGQTQRSSSYK*ESWLDQ Trigger: TTGATCCAGCCAAGACTCCAATTTGTAAGAGGAGGA...CCTCTGTGTCTGACCTAATATCCTTGTGAGTAGTAGGTTAAATTCCTTTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTAGTTCTGATTGGCTGTaGCTGCCCCAATCACATCAC | + |
|
Preference number: 5 (lower is better) Translates to: HFTIIGLLTSHLAFIGTASSDWL*LPQSHH Trigger: GTGATGTGATTGGGGCAGCAACAGCCAATCAGAACT...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CTTCTTCTGGGACTTGGAAACAGCCATCTTACATGGAATTCAACATTCCATCCTAGGTTCTCAAGCAAGTaGGACTCATCTAGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLGLGNSHLTWNSTFHPRFSSK*DSSRIL Trigger: AAGAATCCTAGATGAGTCCAACTTGCTTGAGAACCT...AGGATGGAATGTTGAATTCCATGTAAGATGGCTGTTTCCAAGTCCCAGAAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | ATGACATTCTTGGCTGTGGGGCTTGTGGAAGCAAATGAACCTTTTCATACATCCTGGCTTAAAAGAATTTaGGCTTTCTTCATGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MTFLAVGLVEANEPFHTSWLKRI*AFFMRS Trigger: GCTCCTCATGAAGAAAGCCAAAATTCTTTTAAGCCA...GGATGTATGAAAAGGTTCATTTGCTTCCACAAGCCCCACAGCCAAGAATGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | ATATCTTACCTCGTGTGCTATCTTATTATTCTGGATAAAAAGGTGAAAGCCCCAGAGGTTTCAAGCACTTaGGTCTTAAAGCTGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ISYLVCYLIILDKKVKAPEVSST*VLKLTG Trigger: GCCAGTCAGCTTTAAGACCAAAGTGCTTGAAACCTC...TGGGGCTTTCACCTTTTTATCCAGAATAATAAGATAGCACACGAGGTAAGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS TCA 90 bp | CATCCGAAACTTTGTAGAACTCCGGTAGTTCCTCTTCAGCTCATTTaGATCTACAATAATTTCTCCTCCTCTTACAAATTGGAGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPKLCRTPVVPLQLI*IYNNFSSSYKLESW Trigger: CCAAGACTCCAATTTGTAAGAGGAGGAGAAATTATTGTAGATTCAAATGAGCTGAAGAGGAACTACCGGAGTTCTACAAAGTTTCGGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTCCAATTTCTCCCTTTTaGCAGACAAAGTCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HFTIIGLLTSHLAFIGTAPISPF*QTKSPG Trigger: ACCTGGTGACTTTGTCTGCAAAAAGGGAGAAATTGG...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CACTTCACAATTATTGGATTGCTAACCAGTCATTTAGCTTTTATAGGCACAGCTGATTTCCTCCTCCTTTaGCCAGAAGGCTTATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HFTIIGLLTSHLAFIGTADFLLL*PEGLFL Trigger: GAGAAATAAGCCTTCTGGCAAAAGGAGGAGGAAATC...AGCTGTGCCTATAAAAGCTAAATGACTGGTTAGCAATCCAATAATTGTGAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTGAAGTCTCAGGAGAGCTTCCTCAAGTGGACTTAACTAACTTGAAGGTTTCTTGGAGAGTCTTTTaGTCCAGAGTTAAAAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: LSEVSGELPQVDLTNLKVSWRVF*SRVKRL Trigger: CAATCTTTTAACTCTGGACAAAAAGACTCTCCAAGA...AACCTTCAAGTTAGTTAAGTCCACTTGAGGAAGCTCTCCTGAGACTTCACTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS GCA 72 bp | GGTTGTCTCCCTGTGCTATGGTTGGCTGAGAAAGACTaGTCAGGTTGGGGCAGAGTTTCTTCTCCATTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GCLPVLWLAEKD*SGWGRVSSPFS Trigger: GGAGAATGGAGAAGAAACTCTGCCCCAACCTGAGCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 72 bp | CTTCTTTTGGTGGGAAAAGAAAGGCAGGTCCTGGTCTaGCAGGGATTGCCTGAGTGGTCTTTCCCTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLVGKERQVLV*QGLPEWSFPSG Trigger: GCCAGAAGGGAAAGACCACTCAGGCAATCCCTGCAAGACCAGGACCTGCCTTTCTTTTCCCACCAAAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS GCA 72 bp | TTCTTTTGGTGGGAAAAGAAAGGCAGGTCCTGGTCTTaGAGGGATTGCCTGAGTGGTCTTTCCCTTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FFWWEKKGRSWS*RDCLSGLSLLA Trigger: AGCCAGAAGGGAAAGACCACTCAGGCAATCCCTGCAAGACCAGGACCTGCCTTTCTTTTCCCACCAAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 72 bp | CCACAACATCAGCTGTCCGGCGATTTCCTCCTCCTTTaGCCAGAAGGCTTATTTCTCCAAACACTGACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQHQLSGDFLLL*PEGLFLQTLTQ Trigger: CTGGGTCAGTGTTTGGAGAAATAAGCCTTCTGGCAAAAGGAGGAGGAAATCGCCGGACAGCTGATGTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 72 bp | GTGGGAAAAGAAAGGCAGGTCCTGGTCTTGCAGGGATaGCCTGAGTGGTCTTTCCCTTCTGGCTTAAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGKERQVLVLQG*PEWSFPSGLKE Trigger: TTCTTTTAAGCCAGAAGGGAAAGACCACTCAGGCAATCCCTGCAAGACCAGGACCTGCCTTTCTTTTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS TCA 72 bp | TTTTCACTTTGGTTGTCTCCCTGTGCTATGGTTGGCTaGGAAAGACTGCTCAGGTTGGGGCAGAGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSLWLSPCAMVG*ERLLRLGQSFF Trigger: GAAGAAACTCTGCCCCAACCTGAGCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACAACCAAAGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CCA 72 bp | GTCTTTTTGTCCAGAGTTAAAAGATTGGCAAATCCGTaGGCCACAACATCAGCTGTCCGGCGATTTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VFLSRVKRLANP*ATTSAVRRFPP Trigger: AGGAGGAAATCGCCGGACAGCTGATGTTGTGGCCCACGGATTTGCCAATCTTTTAACTCTGGACAAAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 72 bp | GATTGGTGTCCTGCTCCTCAGAGGTTCTTTTTCACTTaGGTTGTCTCCCTGTGCTATGGTTGGCTGAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: DWCPAPQRFFFT*VVSLCYGWLRK Trigger: CTTTCTCAGCCAACCATAGCACAGGGAGACAACCAAAGTGAAAAAGAACCTCTGAGGAGCAGGACACCAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 90 bp | TTCAAATGTGATTGGTGTCCTGCTCCTCAGAGGTTCTTTTTCACTTaGGTTGTCTCCCTGTGCTATGGTTGGCTGAGAAAGACTGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FKCDWCPAPQRFFFT*VVSLCYGWLRKTAQ Trigger: CTGAGCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACAACCAAAGTGAAAAAGAACCTCTGAGGAGCAGGACACCAATCACATTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS GCA 72 bp | AGTTTTCTCCATCTCTGCCATTGTTCTGGTGAGTTCTaGTCGACATTCAGGGTCAGGATTTGGGGTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: SFLHLCHCSGEF*STFRVRIWGEI Trigger: GATTTCACCCCAAATCCTGACCCTGAATGTCGAGCAGAACTCACCAGAACAATGGCAGAGATGGAGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CCA 72 bp | TTCTTTTTCACTTTGGTTGTCTCCCTGTGCTATGGTTaGCTGAGAAAGACTGCTCAGGTTGGGGCAGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FFFTLVVSLCYG*LRKTAQVGAEF Trigger: AAACTCTGCCCCAACCTGAGCAGTCTTTCTCAGCCAACCATAGCACAGGGAGACAACCAAAGTGAAAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 90 bp | AGGGCAATAGACAACTGCATTGCTGTCGGGAGGTTCTCAAGCAAGTaGGACTCATCTAGGATTCTTTGTGAGTTCCATGTATATTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAIDNCIAVGRFSSK*DSSRILCEFHVYSS Trigger: GCTGGAATATACATGGAACTCACAAAGAATCCTAGATGAGTCCAACTTGCTTGAGAACCTCCCGACAGCAATGCAGTTGTCTATTGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 72 bp | TTTGTTCATGTAGGCAATGATATGGTCCATGCAGGCTaGGAAGTAGTTCTGATTGGCTGTTGCTGCCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: FVHVGNDMVHAG*EVVLIGCCCPN Trigger: ATTGGGGCAGCAACAGCCAATCAGAACTACTTCCAAGCCTGCATGGACCATATCATTGCCTACATGAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 72 bp | AACCAGAACTTGAGCACCATCAGGGCCTCCAAGGACTaGGACTTCTCCGTGTTTGATGATGTACATTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NQNLSTIRASKD*DFSVFDDVHFF Trigger: AAAGAAATGTACATCATCAAACACGGAGAAGTCCAAGTCCTTGGAGGCCCTGATGGTGCTCAAGTTCTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 90 bp | AATAGAGTATTTGTTCATGTAGGCAATGATATGGTCCATGCAGGCTaGGAAGTAGTTCTGATTGGCTGTTGCTGCCCCAATCACATCACG | + |
|
Preference number: 6 (lower is better) Translates to: NRVFVHVGNDMVHAG*EVVLIGCCCPNHIT Trigger: CGTGATGTGATTGGGGCAGCAACAGCCAATCAGAACTACTTCCAAGCCTGCATGGACCATATCATTGCCTACATGAACAAATACTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS GCA 72 bp | ATGATACTGAAGTTTATGTCAAGGGCAATAGACAACTaGATTGCTGTCGGGAGGTTCTCAAGCAAGTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MILKFMSRAIDN*IAVGRFSSKLD Trigger: GTCCAACTTGCTTGAGAACCTCCCGACAGCAATGCAGTTGTCTATTGCCCTTGACATAAACTTCAGTATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS TCA 72 bp | TCTTGTTTTGGTGATATATTTGTAGACATTGCAGTCTaGGAGCTGGCTTCCACTTCTGGGAAATTTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCFGDIFVDIAV*ELASTSGKFSS Trigger: GGAAGAAAATTTCCCAGAAGTGGAAGCCAGCTCTCAGACTGCAATGTCTACAAATATATCACCAAAACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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| CDS CAA 72 bp | TCAGTATATTCATTTATAATTGAGGTTTCAAGCACTTaGGTCTTAAAGCTGACTGGCCTTTCTTTCCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVYSFIIEVSST*VLKLTGLSFPV Trigger: GACTGGGAAAGAAAGGCCAGTCAGCTTTAAGACCAAAGTGCTTGAAACCTCAATTATAAATGAATATACTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102999.2 |
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