Pregenerated sensors for CNGA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030897Ensembl transcript IDs: ENSMUST00000033187.6, ENSMUST00000210344.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTCAGACCTGAAGTCTGGCCATGCCTGGAAGCAGCTGAAGCAGTaGTCTAGTAGTTTAGAAATTTTAACTGCCTTCTTTCCCTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: SSDLKSGHAWKQLKQ*SSSLEILTAFFPCS Trigger: GCTACAGGGAAAGAAGGCAGTTAAAATTTCTAAACTACTAGATCACTGCTTCAGCTGCTTCCAGGCATGGCCAGACTTCAGGTCTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGTGTGTGTGCTGCTGGTaGGTATGGGACATGTATGCT | + |
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Preference number: 2 (lower is better) Translates to: EQKTGTFYVELSLAPEPECVCCW*VWDMYA Trigger: AGCATACATGTCCCATACTCACCAGCAGCACACACA...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGACTTTCCTACCACTCTaGAATTACTTGAGCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: EQKTGTFYVELSLAPEPETFLPL*NYLSWE Trigger: CTCCCAGCTCAAGTAATTCCAGAGTGGTAGGAAAGT...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCCCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTTTTATGAGGATGCACTaGGAGCAGAAGACAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: SFPVASHCPCPPIPATSFFMRMH*EQKTGT Trigger: TGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATAAA...AAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGGGAAAGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| 3UTR TCA 72 bp | CTGAGCCTGAGTGTGTGCATGTGTGTGTGCTGCTGGTaGGTATGGGACATGTATGCTATGACCCACATCCAT | + |
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Preference number: 3 (lower is better) Translates to: LSLSVCMCVCCW*VWDMYAMTHIH Trigger: ATGGATGTGGGTCATAGCATACATGTCCCATACTCACCAGCAGCACACACACATGCACACACTCAGGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| 3UTR-3UTR CAA 90 bp | TGTGATCACAGGGTGAGCATAAGTCATAGGTATGTTTATGAGGATGCACTGGGAATGTGGAACTCAGTCTaGCGCCTGAGCCTGAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CDHRVSISHRYVYEDALGMWNSV*RLSLSV Trigger: CACACTCAGGCTCAGGCGCAAGACTGAGTTCCACAT...TCCCAGTGCATCCTCATAAACATACCTATGACTTATGCTCACCCTGTGATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGCTTCCTGGCTTTGGTTaGGGCTGGGGGCGTGGACTC | + |
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Preference number: 4 (lower is better) Translates to: GSRRQEHFMWNSVLRLSLLPGFG*GWGRGL Trigger: GAGTCCACGCCCCCAGCCCCAACCAAAGCCAGGAAG...CAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGGCCACCACAGCCAGCTaGCCCTCGCGGATGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: GSRRQEHFMWNSVLRLSLATTAS*PSRMMY Trigger: GTACATCATCCGCGAGGGCCAGCTGGCTGTGGTGGC...CAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR TCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGGGCCCTTCTCCTCCATaGCTGCCTGGGCCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLAGPSPP*LPGPVG Trigger: ACCCACAGGCCCAGGCAGTCATGGAGGAGAAGGGCC...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGCGTAGGCTGCATCTGTaGGGACCAGGGAAGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GSRRQEHFMWNSVLRLSLRRLHL*GPGKPG Trigger: ACCTGGCTTCCCTGGTCCCCACAGATGCAGCCTACG...CAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGGGCTTTGGTTGGGGCTaGGGGCGTGGACTCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: EQKTGTFYVELSLAPEPEGFGWG*GRGLCC Trigger: ACAACAGAGTCCACGCCCCCAGCCCCAACCAAAGCC...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTAAATGTTGGTGGCGAAACCCATaGCGGCCAGCAGGAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PVASHCPCPPIPATSFKCWWRNP*RPAGSH Trigger: GTGACTTCCTGCTGGCCGTCATGGGTTTCGCCACCA...ACATTTAAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTAAATGTGCTGGCCCTCGCGGATaGTGTACATCTCTCGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PVASHCPCPPIPATSFKCAGPRG*CTSLGQ Trigger: TTGGCCGAGAGATGTACATCATCCGCGAGGGCCAGC...ACATTTAAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR TCA 90 bp | GGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGGCACAGCATACTGTGTaGCACCGTCATCTGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GSRRQEHFMWNSVLRLSLAQHTV*HRHLPP Trigger: TGGTGGCAGATGACGGTGTCACACAGTATGCTGTGC...CAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCGCTCAAAGCCAGGCTaGGCAGGGTCTGGGTATACC | + |
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Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLARSKPG*AGSGYT Trigger: GGTATACCCAGACCCTGCGCAGCCTGGCTTTGAGCG...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGTGTGACACCGTCATCTaGCACCACAGCCAGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLACDTVI*HHSQLA Trigger: GGCCAGCTGGCTGTGGTGGCAGATGACGGTGTCACA...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGTCAGCCGAGACTCTGTaGCCTCCTGGAGGGCGATCT | + |
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Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLASAETL*PPGGRS Trigger: AGATCGCCCTCCAGGAGGCCACAGAGTCTCGGCTGA...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | TCTTTCCCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTAGCCGCTCAGGCAAGTaGTGCAAGATGGCTACCTCA | + |
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Preference number: 4 (lower is better) Translates to: SFPVASHCPCPPIPATSFSRSGK*CKMATS Trigger: TGAGGTAGCCATCTTGCAGCACTTGCCTGAGCGGCT...AAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGGGAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | TGTGATCACAGGGTGAGCATAAGTCATAGGTATGTTTATGAGGATGCACTGGGAGGATACAGCGACCTCTaGCCGCAGCCGCTCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: CDHRVSISHRYVYEDALGGYSDL*PQPLRQ Trigger: TTGCCTGAGCGGCTGCGGGCAGAGGTCGCTGTATCC...TCCCAGTGCATCCTCATAAACATACCTATGACTTATGCTCACCCTGTGATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | CCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTAAATGTCTTCTCCTCCATGACTaGCTGGGCCTGTGGGTACTC | + |
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Preference number: 4 (lower is better) Translates to: PVASHCPCPPIPATSFKCLLLHD*LGLWVL Trigger: GAGTACCCACAGGCCCAGGCAGTCATGGAGGAGAAG...ACATTTAAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGGGCCACTCTCGAGTCTaGCACTCCAGCCTTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: EQKTGTFYVELSLAPEPEGHSRV*HSSLSM Trigger: CATTGAAAGGCTGGAGTGGCAGACTCGAGAGTGGCC...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTCTGGCAGCCACTTCCTaGCTTTGGTTGGGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: YEDALGAEDRNILCGTQSLAATS*LWLGLG Trigger: CCCCAGCCCCAACCAAAGCCAGGAAGTGGCTGCCAG...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGTATGCGGAAGGCATTTaGGTAAGCTGTGCGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GSRRQEHFMWNSVLRLSLYAEGI*VSCAGL Trigger: GAGACCCGCACAGCTTACCCAAATGCCTTCCGCATA...CAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGGCTCTTCCAGCAGGCTaGCTTCACAGTTCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GSRRQEHFMWNSVLRLSLALPAG*LHSSGR Trigger: TCTTCCAGAACTGTGAAGCCAGCCTGCTGGAAGAGC...CAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTAAATGTTCCTCCATGACTGCCTaGGCCTGTGGGTACTCACTC | + |
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Preference number: 4 (lower is better) Translates to: PVASHCPCPPIPATSFKCSSMTA*ACGYSL Trigger: GAGTGAGTACCCACAGGCCCAGGCAGTCATGGAGGA...ACATTTAAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | TGTGATCACAGGGTGAGCATAAGTCATAGGTATGTTTATGAGGATGCACTGGGAGACTCTGTGGCCTCCTaGAGGGCGATCTCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CDHRVSISHRYVYEDALGDSVAS*RAISAA Trigger: GGCAGCTGAGATCGCCCTCCAGGAGGCCACAGAGTC...TCCCAGTGCATCCTCATAAACATACCTATGACTTATGCTCACCCTGTGATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGACAGGAAGCTCCAGGTaGGTACATAGCGACTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLATGSSR*VHSDWR Trigger: TCGCCAGTCGCTATGTACGCACCTGGAGCTTCCTGT...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | TCTTTCCCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTGAGGGCGATCTCAGCTaGCTCAGCATTCACATCCAA | + |
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Preference number: 4 (lower is better) Translates to: SFPVASHCPCPPIPATSFEGDLS*LSIHIQ Trigger: TTGGATGTGAATGCTGAGGCAGCTGAGATCGCCCTC...AAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGGGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGGTAAGCTATCTTCAGTaGGCTGGACTCCAGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: EQKTGTFYVELSLAPEPEVSYLQ*AGLQLS Trigger: GCTGAGCTGGAGTCCAGCGCACTGAAGATAGCTTAC...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGCTGGCTTCACAGTTCTaGAAGATCTGTACTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GSRRQEHFMWNSVLRLSLLASQF*KICTRL Trigger: GAGCCGAGTACAGATCTTCCAGAACTGTGAAGCCAG...CAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR TCA 90 bp | TGTGATCACAGGGTGAGCATAAGTCATAGGTATGTTTATGAGGATGCACTGGGATACGTATTCGCCTGGTaGGTAGGTCTGGGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CDHRVSISHRYVYEDALGYVFAW*VGLGLE Trigger: CTCCAGCCCCAGACCTACTCACCAGGCGAATACGTA...TCCCAGTGCATCCTCATAAACATACCTATGACTTATGCTCACCCTGTGATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR TCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGGAGGCAGAAGAGGTCTaGATAGCCCAGGCTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLAEAEEV*IAQALD Trigger: ATCAAGAGCCTGGGCTATTCAGACCTCTTCTGCCTC...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR TCA 90 bp | TCTTTCCCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTGTAGATCCTCCTTGCTaGGGCAGAAGAGGTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SFPVASHCPCPPIPATSFVDPPC*GRRGLN Trigger: ATTCAGACCTCTTCTGCCTCAGCAAGGAGGATCTAC...AAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGGGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | CCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTAAATGTCATTTGGGTAAGCTGTaGGGGTCTCTGTACGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: PVASHCPCPPIPATSFKCHLGKL*GSLYGR Trigger: TCGACCGTACAGAGACCCGCACAGCTTACCCAAATG...ACATTTAAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGGTCTGGGTAGAAGGCTaGATCTGCCGTGTTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: EQKTGTFYVELSLAPEPEVWVEG*ICRVHV Trigger: AACATGAACACGGCAGATGCAGCCTTCTACCCAGAC...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | CCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTAAATGTCCCAAAGTAGAGCCCTaGACCAAGCACAGCATACTG | + |
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Preference number: 4 (lower is better) Translates to: PVASHCPCPPIPATSFKCPKVEP*TKHSIL Trigger: CAGTATGCTGTGCTTGGTGCAGGGCTCTACTTTGGG...ACATTTAAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGGTGTGTCACCCACAGTaGTCAGGATCAGAGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLAVCHPQ*SGSEWR Trigger: TCTCCACTCTGATCCTGACCACTGTGGGTGACACAC...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTCCTGAGGGTCCCTCCTaGCCAGCTTTTTCCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YEDALGAEDRNILCGTQSPEGPS*PAFSSP Trigger: TGGAGAGGAAAAAGCTGGCCAGGAGGGACCCTCAGG...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR TCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGTGGTCATCTTCTTGTTaGTCTGCAGATGCTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: EQKTGTFYVELSLAPEPEWSSSC*SADAGT Trigger: GGTACCAGCATCTGCAGATCAACAAGAAGATGACCA...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGTCATCAGCTTGGCTATaGGGAAGGCATTTGGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: EQKTGTFYVELSLAPEPESSAWL*GRHLGK Trigger: CTTACCCAAATGCCTTCCGCATAGCCAAGCTGATGA...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | TGTGATCACAGGGTGAGCATAAGTCATAGGTATGTTTATGAGGATGCACTGGGATTGGGGCTGGGGGCGTaGACTCTGTTGTCTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: CDHRVSISHRYVYEDALGLGLGA*TLLSSL Trigger: AAGTGAAGACAACAGAGTCCACGCCCCCAGCCCCAA...TCCCAGTGCATCCTCATAAACATACCTATGACTTATGCTCACCCTGTGATCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGTGTAGATCATCAGCTTaGCTATGCGGAAGGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: GSRRQEHFMWNSVLRLSLCRSSA*LCGRHL Trigger: CAAATGCCTTCCGCATAGCCAAGCTGATGATCTACA...CAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTCGAAGCCCAGGTACCTaGACAGGGCGAAGTATAAGC | + |
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Preference number: 4 (lower is better) Translates to: YEDALGAEDRNILCGTQSRSPGT*TGRSIS Trigger: GCTTATACTTCGCCCTGTCCAGGTACCTGGGCTTCG...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | TGTGATCACAGGGTGAGCATAAGTCATAGGTATGTTTATGAGGATGCACTGGGACTATCTTCAGTGCGCTaGACTCCAGCTCAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CDHRVSISHRYVYEDALGLSSVR*TPAQPG Trigger: TCCTGGCTGAGCTGGAGTCCAGCGCACTGAAGATAG...TCCCAGTGCATCCTCATAAACATACCTATGACTTATGCTCACCCTGTGATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR GCA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTCGCTCAGGCAAGTGCTaGAAGATGGCTACCTCATTG | + |
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Preference number: 4 (lower is better) Translates to: YEDALGAEDRNILCGTQSRSGKC*KMATSL Trigger: CAATGAGGTAGCCATCTTGCAGCACTTGCCTGAGCG...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS-3UTR CCA 90 bp | TCTTTCCCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTTGGTCAGGATCAGAGTaGAGAAGTAGAAGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFPVASHCPCPPIPATSFWSGSE*RSRSCR Trigger: TCTACAGCTTCTACTTCTCCACTCTGATCCTGACCA...AAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGGGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR TCA 90 bp | TCTTTCCCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTTGTTCATGTTGTAAATaGCAGAGCTCATGCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPVASHCPCPPIPATSFCSCCK*QSSCYP Trigger: TGGGTAGCATGAGCTCTGTCATTTACAACATGAACA...AAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGGGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR GCA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGTCTACCACCAGGATaGCCTGTTCTAGGAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YEDALGAEDRNILCGTQSCLPPG*PVLGIL Trigger: CAGGATTCCTAGAACAGGGCATCCTGGTGGTAGACA...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGATCTTCTTGTTGATCTaGAGATGCTGGTACCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQKTGTFYVELSLAPEPEIFLLI*RCWYQS Trigger: TGACTGGTACCAGCATCTGCAGATCAACAAGAAGAT...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR CCA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTGGAGGCGAGCAAACTTaGTCTGTAGGTCATCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YEDALGAEDRNILCGTQSGGEQT*SVGHQA Trigger: AGCTTGATGACCTACAGACCAAGTTTGCTCGCCTCC...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR GCA 90 bp | CCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTAAATGTGTAGAAGGCTGCATCTaGCGTGTTCATGTTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVASHCPCPPIPATSFKCVEGCI*RVHVVN Trigger: ATTTACAACATGAACACGGCAGATGCAGCCTTCTAC...ACATTTAAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR GCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGTTGTTGATCTGCAGATaGTGGTACCAGTCAATAACG | + |
|
Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLALLICR*WYQSIT Trigger: CGTTATTGACTGGTACCAGCATCTGCAGATCAACAA...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR TCA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCAATTTATTCATTTTaGGCAAGATTTCACGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMHWEQKTGTFYVELSLAPIYSF*ARFHGP Trigger: AGGGCCGTGAAATCTTGCTCAAAATGAATAAATTGG...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR GCA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTAGCCTTCGGTTGACGTaGTGTAGCTTCATGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: YEDALGAEDRNILCGTQSSLRLT*CSFMYF Trigger: GAAATACATGAAGCTACAGCACGTCAACCGAAGGCT...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS CCA 90 bp | GAGATACTGGCGCCGCAAGCGCTCAAAGCCAGGCTGCGCAGGGTCTaGGTATACCCATGCATCCCGTCCGAAGCCCAGGTACCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: EILAPQALKARLRRV*VYPCIPSEAQVPGQ Trigger: CTGTCCAGGTACCTGGGCTTCGGACGGGATGCATGGGTATACCCAGACCCTGCGCAGCCTGGCTTTGAGCGCTTGCGGCGCCAGTATCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 90 bp | CTGTACTCGGCTCAGGGTAGACAGGTGTACGGATACAGCGACCTCTaGCCGCAGCCGCTCAGGCAAGTGCTGCAAGATGGCTACCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LYSAQGRQVYGYSDL*PQPLRQVLQDGYLI Trigger: AATGAGGTAGCCATCTTGCAGCACTTGCCTGAGCGGCTGCGGGCAGAGGTCGCTGTATCCGTACACCTGTCTACCCTGAGCCGAGTACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 90 bp | CGTCTGGCATCGGCCACTCTCGAGTCTGCCACTCCAGCCTTTCAATaGGGTAAGCTATCTTCAGTGCGCTGGACTCCAGCTCAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLASATLESATPAFQ*GKLSSVRWTPAQPG Trigger: TCCTGGCTGAGCTGGAGTCCAGCGCACTGAAGATAGCTTACCGCATTGAAAGGCTGGAGTGGCAGACTCGAGAGTGGCCGATGCCAGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 90 bp | GTAGGTCATCAAGCTGCTGGTCGAGGCCTTTCAGCCGAGACTCTGTaGCCTCCTGGAGGGCGATCTCAGCTGCCTCAGCATTCACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGHQAAGRGLSAETL*PPGGRSQLPQHSHP Trigger: TGGATGTGAATGCTGAGGCAGCTGAGATCGCCCTCCAGGAGGCCACAGAGTCTCGGCTGAAAGGCCTCGACCAGCAGCTTGATGACCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 90 bp | TCCTTCTCCAGGCTCAGCCTCATCATCAGCCTCACCCATGTCGTCTaGCATCGGCCACTCTCGAGTCTGCCACTCCAGCCTTTCAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSRLSLIISLTHVV*HRPLSSLPLQPFNA Trigger: CGCATTGAAAGGCTGGAGTGGCAGACTCGAGAGTGGCCGATGCCAGACGACATGGGTGAGGCTGATGATGAGGCTGAGCCTGGAGAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 90 bp | CATCTGTGGGGACCAGGGAAGCCAGGTCCAACAGGAAGCTCCAGGTaGGTACATAGCGACTGGCGATCATGCTTTTGTCTACCACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HLWGPGKPGPTGSSR*VHSDWRSCFCLPPG Trigger: TCCTGGTGGTAGACAAAAGCATGATCGCCAGTCGCTATGTACGCACCTGGAGCTTCCTGTTGGACCTGGCTTCCCTGGTCCCCACAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS GCA 90 bp | AGGTGTACGGATACAGCGACCTCTGCCCGCAGCCGCTCAGGCAAGTaGTGCAAGATGGCTACCTCATTGGTCATCTTCTTGTTGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCTDTATSARSRSGK*CKMATSLVIFLLIC Trigger: GCAGATCAACAAGAAGATGACCAATGAGGTAGCCATCTTGCAGCACTTGCCTGAGCGGCTGCGGGCAGAGGTCGCTGTATCCGTACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 90 bp | GGGAAGCCAGGTCCAACAGGAAGCTCCAGGTGCGTACATAGCGACTaGCGATCATGCTTTTGTCTACCACCAGGATGCCCTGTTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKPGPTGSSRCVHSD*RSCFCLPPGCPVLG Trigger: TCCTAGAACAGGGCATCCTGGTGGTAGACAAAAGCATGATCGCCAGTCGCTATGTACGCACCTGGAGCTTCCTGTTGGACCTGGCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS CCA 90 bp | TCAAGCTGCTGGTCGAGGCCTTTCAGCCGAGACTCTGTGGCCTCCTaGAGGGCGATCTCAGCTGCCTCAGCATTCACATCCAATTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSCWSRPFSRDSVAS*RAISAASAFTSNLF Trigger: GAATAAATTGGATGTGAATGCTGAGGCAGCTGAGATCGCCCTCCAGGAGGCCACAGAGTCTCGGCTGAAAGGCCTCGACCAGCAGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 90 bp | TGTAGATCATCAGCTTGGCTATGCGGAAGGCATTTGGGTAAGCTGTaGGGGTCTCTGTACGGTCGAAAGCCTCAAAGAGGCGAGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: CRSSAWLCGRHLGKL*GSLYGRKPQRGEAL Trigger: GAGTGCCTCGCCTCTTTGAGGCTTTCGACCGTACAGAGACCCGCACAGCTTACCCAAATGCCTTCCGCATAGCCAAGCTGATGATCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 90 bp | TGTACGGATACAGCGACCTCTGCCCGCAGCCGCTCAGGCAAGTGCTaGAAGATGGCTACCTCATTGGTCATCTTCTTGTTGATCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CTDTATSARSRSGKC*KMATSLVIFLLICR Trigger: TCTGCAGATCAACAAGAAGATGACCAATGAGGTAGCCATCTTGCAGCACTTGCCTGAGCGGCTGCGGGCAGAGGTCGCTGTATCCGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 90 bp | TTCATTTTGAGCAAGATTTCACGGCCCTTCTCCTCCATGACTGCCTaGGCCTGTGGGTACTCACTCAGCACCTCCCGTAGATCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FILSKISRPFSSMTA*ACGYSLSTSRRSSL Trigger: CAAGGAGGATCTACGGGAGGTGCTGAGTGAGTACCCACAGGCCCAGGCAGTCATGGAGGAGAAGGGCCGTGAAATCTTGCTCAAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 90 bp | GGTCCAACAGGAAGCTCCAGGTGCGTACATAGCGACTGGCGATCATaGTTTTGTCTACCACCAGGATGCCCTGTTCTAGGAATCCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPTGSSRCVHSDWRS*FCLPPGCPVLGILC Trigger: ACACAGGATTCCTAGAACAGGGCATCCTGGTGGTAGACAAAAGCATGATCGCCAGTCGCTATGTACGCACCTGGAGCTTCCTGTTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCCTGTAGCTTCACACTGTCCTTGTCCTCCTATACCAGCGACCTCCTTTCACCAGGTAACTGTGTaGCAAGTCAGGAAAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFPVASHCPCPPIPATSFHQVTV*QVRKAG Trigger: GCCTGCTTTCCTGACTTGCAACACAGTTACCTGGTG...AAAGGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGGGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS GCA 90 bp | TGCGTACATAGCGACTGGCGATCATGCTTTTGTCTACCACCAGGATaGCCTGTTCTAGGAATCCTGTGTGGAAGCGTACCCCAATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: CVHSDWRSCFCLPPG*PVLGILCGSVPQYL Trigger: TAGATATTGGGGTACGCTTCCACACAGGATTCCTAGAACAGGGCATCCTGGTGGTAGACAAAAGCATGATCGCCAGTCGCTATGTACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS GCA 90 bp | GCCTTTCAGCCGAGACTCTGTGGCCTCCTGGAGGGCGATCTCAGCTaGCTCAGCATTCACATCCAATTTATTCATTTTGAGCAAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFQPRLCGLLEGDLS*LSIHIQFIHFEQDF Trigger: GAAATCTTGCTCAAAATGAATAAATTGGATGTGAATGCTGAGGCAGCTGAGATCGCCCTCCAGGAGGCCACAGAGTCTCGGCTGAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 90 bp | GACGACAAAAATGTAGATCATCAGCTTGGCTATGCGGAAGGCATTTaGGTAAGCTGTGCGGGTCTCTGTACGGTCGAAAGCCTCAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DDKNVDHQLGYAEGI*VSCAGLCTVESLKE Trigger: CTCTTTGAGGCTTTCGACCGTACAGAGACCCGCACAGCTTACCCAAATGCCTTCCGCATAGCCAAGCTGATGATCTACATTTTTGTCGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS-3UTR CAA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGAGGAGGCGAGCAAACTaGGTCTGTAGGTCATCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RMHWEQKTGTFYVELSLARRRAN*VCRSSS Trigger: GCTTGATGACCTACAGACCAAGTTTGCTCGCCTCCT...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS TCA 90 bp | CCAGGTACCTGGACAGGGCGAAGTATAAGCAGCTGTTCCAATGGATaGCGACAAAAATGTAGATCATCAGCTTGGCTATGCGGAAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGTWTGRSISSCSNG*RQKCRSSAWLCGRH Trigger: ATGCCTTCCGCATAGCCAAGCTGATGATCTACATTTTTGTCGTCATCCATTGGAACAGCTGCTTATACTTCGCCCTGTCCAGGTACCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS-3UTR CAA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTCTATGCGGAAGGCATTaGGGTAAGCTGTGCGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YEDALGAEDRNILCGTQSLCGRH*GKLCGS Trigger: AGACCCGCACAGCTTACCCAAATGCCTTCCGCATAG...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR CAA 90 bp | TGTGATCACAGGGTGAGCATAAGTCATAGGTATGTTTATGAGGATGCACTGGGATTTTCCTCTCCATCCTaGGACGTTCCTTCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CDHRVSISHRYVYEDALGFSSPS*DVPSPG Trigger: GCCTGGAGAAGGAACGTCCAAGGATGGAGAGGAAAA...TCCCAGTGCATCCTCATAAACATACCTATGACTTATGCTCACCCTGTGATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS GCA 90 bp | CATGTATTTCTTTACCAGAGCATGGTCTGGGTAGAAGGCTGCATCTaGCGTGTTCATGTTGTAAATGACAGAGCTCATGCTACCCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: HVFLYQSMVWVEGCI*RVHVVNDRAHATHD Trigger: ATCATGGGTAGCATGAGCTCTGTCATTTACAACATGAACACGGCAGATGCAGCCTTCTACCCAGACCATGCTCTGGTAAAGAAATACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 90 bp | AGGAAAGCAGGCCCTGCATACAACGATGATGAGATTATACATGATTaGGAAGACCATCGTGTTCAGCCACCAGTAGTAATAATCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKAGPAYNDDEIIHD*EDHRVQPPVVIIPR Trigger: TCTGGGGATTATTACTACTGGTGGCTGAACACGATGGTCTTCCCAATCATGTATAATCTCATCATCGTTGTATGCAGGGCCTGCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR CAA 90 bp | AGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCAGACATGTTCCCTTaGATGTTGATGATGCTAATC | + |
|
Preference number: 5 (lower is better) Translates to: RMHWEQKTGTFYVELSLAPDMFP*MLMMLI Trigger: GATTAGCATCATCAACATCAAAGGGAACATGTCTGG...CGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR CAA 90 bp | GAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTGCGCCTGAGCCTGAGTCCAATTTATTCATTTaGAGCAAGATTTCACGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EQKTGTFYVELSLAPEPESNLFI*SKISRP Trigger: GGGCCGTGAAATCTTGCTCAAAATGAATAAATTGGA...CTCAGGCTCAGGCGCAAGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR CAA 90 bp | TATGAGGATGCACTGGGAGCAGAAGACAGGAACATTTTATGTGGAACTCAGTCTTTGGTCATCTTCTTGTaGATCTGCAGATGCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: YEDALGAEDRNILCGTQSLVIFL*ICRCWY Trigger: GTACCAGCATCTGCAGATCAACAAGAAGATGACCAA...AGACTGAGTTCCACATAAAATGTTCCTGTCTTCTGCTCCCAGTGCATCCTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS-3UTR CAA 90 bp | TGTGATCACAGGGTGAGCATAAGTCATAGGTATGTTTATGAGGATGCACTGGGAATGTTCCCTTTGATGTaGATGATGCTAATCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CDHRVSISHRYVYEDALGMFPLM*MMLISP Trigger: TGGGGAGATTAGCATCATCAACATCAAAGGGAACAT...TCCCAGTGCATCCTCATAAACATACCTATGACTTATGCTCACCCTGTGATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
||
| CDS CCA 72 bp | GCGCCGCAAGCGCTCAAAGCCAGGCTGCGCAGGGTCTaGGTATACCCATGCATCCCGTCCGAAGCCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: APQALKARLRRV*VYPCIPSEAQV Trigger: TACCTGGGCTTCGGACGGGATGCATGGGTATACCCAGACCCTGCGCAGCCTGGCTTTGAGCGCTTGCGGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 72 bp | CTCAAAGCCAGGCTGCGCAGGGTCTGGGTATACCCATaGATCCCGTCCGAAGCCCAGGTACCTGGACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LKARLRRVWVYP*IPSEAQVPGQG Trigger: GCCCTGTCCAGGTACCTGGGCTTCGGACGGGATGCATGGGTATACCCAGACCCTGCGCAGCCTGGCTTTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 72 bp | GCTCAGGGTAGACAGGTGTACGGATACAGCGACCTCTaGCCGCAGCCGCTCAGGCAAGTGCTGCAAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQGRQVYGYSDL*PQPLRQVLQDG Trigger: GCCATCTTGCAGCACTTGCCTGAGCGGCTGCGGGCAGAGGTCGCTGTATCCGTACACCTGTCTACCCTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 72 bp | CAAGCTGCTGGTCGAGGCCTTTCAGCCGAGACTCTGTaGCCTCCTGGAGGGCGATCTCAGCTGCCTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QAAGRGLSAETL*PPGGRSQLPQH Trigger: ATGCTGAGGCAGCTGAGATCGCCCTCCAGGAGGCCACAGAGTCTCGGCTGAAAGGCCTCGACCAGCAGCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 72 bp | TGGTCGAGGCCTTTCAGCCGAGACTCTGTGGCCTCCTaGAGGGCGATCTCAGCTGCCTCAGCATTCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: WSRPFSRDSVAS*RAISAASAFTS Trigger: GGATGTGAATGCTGAGGCAGCTGAGATCGCCCTCCAGGAGGCCACAGAGTCTCGGCTGAAAGGCCTCGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 72 bp | AGGCTCAGCCTCATCATCAGCCTCACCCATGTCGTCTaGCATCGGCCACTCTCGAGTCTGCCACTCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RLSLIISLTHVV*HRPLSSLPLQP Trigger: AGGCTGGAGTGGCAGACTCGAGAGTGGCCGATGCCAGACGACATGGGTGAGGCTGATGATGAGGCTGAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 72 bp | GTCACCCACCATGAAGAGGTACTCTTCCTCTCGGGCTaGCAGCGGTGTGTCACCCACAGTGGTCAGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: VTHHEEVLFLSG*QRCVTHSGQDQ Trigger: CTGATCCTGACCACTGTGGGTGACACACCGCTGCCAGCCCGAGAGGAAGAGTACCTCTTCATGGTGGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 72 bp | TGCACCAAGCACAGCATACTGTGTGACACCGTCATCTaGCACCACAGCCAGCTGGCCCTCGCGGATGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: CTKHSILCDTVI*HHSQLALADDV Trigger: TACATCATCCGCGAGGGCCAGCTGGCTGTGGTGGCAGATGACGGTGTCACACAGTATGCTGTGCTTGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 72 bp | AGGAGGCGAGCAAACTTGGTCTGTAGGTCATCAAGCTaGTGGTCGAGGCCTTTCAGCCGAGACTCTGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRRANLVCRSSS*WSRPFSRDSVA Trigger: GGCCACAGAGTCTCGGCTGAAAGGCCTCGACCAGCAGCTTGATGACCTACAGACCAAGTTTGCTCGCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS CCA 72 bp | AGGCGAGCAAACTTGGTCTGTAGGTCATCAAGCTGCTaGTCGAGGCCTTTCAGCCGAGACTCTGTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRANLVCRSSSC*SRPFSRDSVAS Trigger: GGAGGCCACAGAGTCTCGGCTGAAAGGCCTCGACCAGCAGCTTGATGACCTACAGACCAAGTTTGCTCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 72 bp | ACAGCGACCTCTGCCCGCAGCCGCTCAGGCAAGTGCTaGAAGATGGCTACCTCATTGGTCATCTTCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TATSARSRSGKC*KMATSLVIFLL Trigger: CAACAAGAAGATGACCAATGAGGTAGCCATCTTGCAGCACTTGCCTGAGCGGCTGCGGGCAGAGGTCGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
||
| CDS GCA 72 bp | GATACAGCGACCTCTGCCCGCAGCCGCTCAGGCAAGTaGTGCAAGATGGCTACCTCATTGGTCATCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DTATSARSRSGK*CKMATSLVIFL Trigger: CAAGAAGATGACCAATGAGGTAGCCATCTTGCAGCACTTGCCTGAGCGGCTGCGGGCAGAGGTCGCTGTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS GCA 72 bp | CCACTCCAGCCTTTCAATGCGGTAAGCTATCTTCAGTaGGCTGGACTCCAGCTCAGCCAGGAGGCGAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PLQPFNAVSYLQ*AGLQLSQEASK Trigger: TTTGCTCGCCTCCTGGCTGAGCTGGAGTCCAGCGCACTGAAGATAGCTTACCGCATTGAAAGGCTGGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS GCA 72 bp | TCGGCCACTCTCGAGTCTGCCACTCCAGCCTTTCAATaGGGTAAGCTATCTTCAGTGCGCTGGACTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SATLESATPAFQ*GKLSSVRWTPA Trigger: AGCTGGAGTCCAGCGCACTGAAGATAGCTTACCGCATTGAAAGGCTGGAGTGGCAGACTCGAGAGTGGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS CCA 72 bp | CCAGCCTTTCAATGCGGTAAGCTATCTTCAGTGCGCTaGACTCCAGCTCAGCCAGGAGGCGAGCAAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: PAFQCGKLSSVR*TPAQPGGEQTW Trigger: CCAAGTTTGCTCGCCTCCTGGCTGAGCTGGAGTCCAGCGCACTGAAGATAGCTTACCGCATTGAAAGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS GCA 72 bp | TCAGCTTGGCTATGCGGAAGGCATTTGGGTAAGCTGTaGGGGTCTCTGTACGGTCGAAAGCCTCAAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SAWLCGRHLGKL*GSLYGRKPQRG Trigger: GCCTCTTTGAGGCTTTCGACCGTACAGAGACCCGCACAGCTTACCCAAATGCCTTCCGCATAGCCAAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS CCA 72 bp | GGTCCAACAGGAAGCTCCAGGTGCGTACATAGCGACTaGCGATCATGCTTTTGTCTACCACCAGGATGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GPTGSSRCVHSD*RSCFCLPPGCP Trigger: AGGGCATCCTGGTGGTAGACAAAAGCATGATCGCCAGTCGCTATGTACGCACCTGGAGCTTCCTGTTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS CCA 72 bp | GGTATACCCATGCATCCCGTCCGAAGCCCAGGTACCTaGACAGGGCGAAGTATAAGCAGCTGTTCCAATGGA | + |
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Preference number: 6 (lower is better) Translates to: GIPMHPVRSPGT*TGRSISSCSNG Trigger: TCCATTGGAACAGCTGCTTATACTTCGCCCTGTCCAGGTACCTGGGCTTCGGACGGGATGCATGGGTATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS GCA 72 bp | AGCGACTGGCGATCATGCTTTTGTCTACCACCAGGATaGCCTGTTCTAGGAATCCTGTGTGGAAGCGTACCC | + |
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Preference number: 6 (lower is better) Translates to: SDWRSCFCLPPG*PVLGILCGSVP Trigger: GGGTACGCTTCCACACAGGATTCCTAGAACAGGGCATCCTGGTGGTAGACAAAAGCATGATCGCCAGTCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS GCA 72 bp | GGAAGCTCCAGGTGCGTACATAGCGACTGGCGATCATaGTTTTGTCTACCACCAGGATGCCCTGTTCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSSRCVHSDWRS*FCLPPGCPVLG Trigger: TCCTAGAACAGGGCATCCTGGTGGTAGACAAAAGCATGATCGCCAGTCGCTATGTACGCACCTGGAGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS CAA 90 bp | TCTGCCCGCAGCCGCTCAGGCAAGTGCTGCAAGATGGCTACCTCATaGGTCATCTTCTTGTTGATCTGCAGATGCTGGTACCAGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: SARSRSGKCCKMATS*VIFLLICRCWYQSI Trigger: TATTGACTGGTACCAGCATCTGCAGATCAACAAGAAGATGACCAATGAGGTAGCCATCTTGCAGCACTTGCCTGAGCGGCTGCGGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS CAA 90 bp | GTCACTCGTGTAGTCCAGCACAAACCAGGCCACCAGGTAACTGTGTaGCAAGTCAGGAAAGCAGGCCCTGCATACAACGATGATGAGATT | + |
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Preference number: 6 (lower is better) Translates to: VTRVVQHKPGHQVTV*QVRKAGPAYNDDEI Trigger: AATCTCATCATCGTTGTATGCAGGGCCTGCTTTCCTGACTTGCAACACAGTTACCTGGTGGCCTGGTTTGTGCTGGACTACACGAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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| CDS CAA 90 bp | TGCAGATGCTGGTACCAGTCAATAACGCGCCGCTCCAGCCTTCGGTaGACGTGCTGTAGCTTCATGTATTTCTTTACCAGAGCATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: CRCWYQSITRRSSLR*TCCSFMYFFTRAWS Trigger: AGACCATGCTCTGGTAAAGAAATACATGAAGCTACAGCACGTCAACCGAAGGCTGGAGCGGCGCGTTATTGACTGGTACCAGCATCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS CAA 90 bp | AGGGCGATCTCAGCTGCCTCAGCATTCACATCCAATTTATTCATTTaGAGCAAGATTTCACGGCCCTTCTCCTCCATGACTGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RAISAASAFTSNLFI*SKISRPFSSMTAWA Trigger: GGCCCAGGCAGTCATGGAGGAGAAGGGCCGTGAAATCTTGCTCAAAATGAATAAATTGGATGTGAATGCTGAGGCAGCTGAGATCGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS GCA 72 bp | CCGAGACTCTGTGGCCTCCTGGAGGGCGATCTCAGCTaGCTCAGCATTCACATCCAATTTATTCATTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PRLCGLLEGDLS*LSIHIQFIHFE Trigger: CTCAAAATGAATAAATTGGATGTGAATGCTGAGGCAGCTGAGATCGCCCTCCAGGAGGCCACAGAGTCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS CCA 72 bp | AATGTAGATCATCAGCTTGGCTATGCGGAAGGCATTTaGGTAAGCTGTGCGGGTCTCTGTACGGTCGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: NVDHQLGYAEGI*VSCAGLCTVES Trigger: GCTTTCGACCGTACAGAGACCCGCACAGCTTACCCAAATGCCTTCCGCATAGCCAAGCTGATGATCTACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS GCA 72 bp | AAGATGGCTACCTCATTGGTCATCTTCTTGTTGATCTaGAGATGCTGGTACCAGTCAATAACGCGCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KMATSLVIFLLI*RCWYQSITRRS Trigger: GGAGCGGCGCGTTATTGACTGGTACCAGCATCTGCAGATCAACAAGAAGATGACCAATGAGGTAGCCATCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS GCA 72 bp | GATGTTGATGATGCTAATCTCCCCAAAGTAGAGCCCTaGACCAAGCACAGCATACTGTGTGACACCGTCATC | + |
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Preference number: 6 (lower is better) Translates to: DVDDANLPKVEP*TKHSILCDTVI Trigger: GATGACGGTGTCACACAGTATGCTGTGCTTGGTGCAGGGCTCTACTTTGGGGAGATTAGCATCATCAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS CAA 72 bp | AAATGTAGATCATCAGCTTGGCTATGCGGAAGGCATTaGGGTAAGCTGTGCGGGTCTCTGTACGGTCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KCRSSAWLCGRH*GKLCGSLYGRK Trigger: CTTTCGACCGTACAGAGACCCGCACAGCTTACCCAAATGCCTTCCGCATAGCCAAGCTGATGATCTACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS CAA 72 bp | TGGTACCAGTCAATAACGCGCCGCTCCAGCCTTCGGTaGACGTGCTGTAGCTTCATGTATTTCTTTACCAGA | + |
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Preference number: 6 (lower is better) Translates to: WYQSITRRSSLR*TCCSFMYFFTR Trigger: TCTGGTAAAGAAATACATGAAGCTACAGCACGTCAACCGAAGGCTGGAGCGGCGCGTTATTGACTGGTACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS GCA 72 bp | CTTTACCAGAGCATGGTCTGGGTAGAAGGCTGCATCTaGCGTGTTCATGTTGTAAATGACAGAGCTCATGCT | + |
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Preference number: 6 (lower is better) Translates to: LYQSMVWVEGCI*RVHVVNDRAHA Trigger: AGCATGAGCTCTGTCATTTACAACATGAACACGGCAGATGCAGCCTTCTACCCAGACCATGCTCTGGTAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS TCA 72 bp | TGGACAGGGCGAAGTATAAGCAGCTGTTCCAATGGATaGCGACAAAAATGTAGATCATCAGCTTGGCTATGC | + |
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Preference number: 6 (lower is better) Translates to: WTGRSISSCSNG*RQKCRSSAWLC Trigger: GCATAGCCAAGCTGATGATCTACATTTTTGTCGTCATCCATTGGAACAGCTGCTTATACTTCGCCCTGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033187.6 ENSMUST00000210344.2 |
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| CDS CCA 72 bp | GGCCCTGCATACAACGATGATGAGATTATACATGATTaGGAAGACCATCGTGTTCAGCCACCAGTAGTAATA | + |
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Preference number: 6 (lower is better) Translates to: GPAYNDDEIIHD*EDHRVQPPVVI Trigger: TATTACTACTGGTGGCTGAACACGATGGTCTTCCCAATCATGTATAATCTCATCATCGTTGTATGCAGGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033187.6 |
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