Pregenerated sensors for CNGA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067220Ensembl transcript IDs: ENSMUST00000087213.12, ENSMUST00000126799.4, ENSMUST00000135701.2, ENSMUST00000169997.6, ENSMUST00000201463.4
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGCACATCCAATAAGCCTGCACACAGACCTCTATGTCAGAGGCTaGCTCCTGGAGAATGTGGCTCAAGGTCCATGGCTCAGGGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RAHPISLHTDLYVRG*LLENVAQGPWLRVS Trigger: TGAAACCCTGAGCCATGGACCTTGAGCCACATTCTCCAGGAGGCAGCCTCTGACATAGAGGTCTGTGTGCAGGCTTATTGGATGTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CCA 90 bp | GCCTGCACACAGACCTCTATGTCAGAGGCTGCCTCCTGGAGAATGTaGCTCAAGGTCCATGGCTCAGGGTTTCATGACTTTTGTTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: ACTQTSMSEAASWRM*LKVHGSGFHDFCCP Trigger: AGGACAACAAAAGTCATGAAACCCTGAGCCATGGACCTTGAGCCACATTCTCCAGGAGGCAGCCTCTGACATAGAGGTCTGTGTGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 90 bp | CTTAGAGGGAGCAGCCCCATAATTTCCTATCTAAAAGAGTGGATCTaGGCAGGGCACAGGTGGGCAGCAAGGATACACTTGGCTTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LRGSSPIISYLKEWI*AGHRWAARIHLAFR Trigger: CCTGAAAGCCAAGTGTATCCTTGCTGCCCACCTGTGCCCTGCTCAGATCCACTCTTTTAGATAGGAAATTATGGGGCTGCTCCCTCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 90 bp | ATGACTGCAAAGGCCCAGGTCTGTTACCTGAGCATGACAGCAGCTTaGAAGCAGACCCATGTCCCCAAATTCCCATACGATCAAACCTAT | + |
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Preference number: 1 (lower is better) Translates to: MTAKAQVCYLSMTAA*KQTHVPKFPYDQTY Trigger: ATAGGTTTGATCGTATGGGAATTTGGGGACATGGGTCTGCTTTCAAGCTGCTGTCATGCTCAGGTAACAGACCTGGGCCTTTGCAGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR GCA 90 bp | TTCCCATACGATCAAACCTATTCTCTGACATTCAGCGCCTTTCTCTaGCCAGTTCTATCACCCCTAACTCCCTTCCAGGTATCACTCCAA | + |
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Preference number: 1 (lower is better) Translates to: FPYDQTYSLTFSAFL*PVLSPLTPFQVSLQ Trigger: TTGGAGTGATACCTGGAAGGGAGTTAGGGGTGATAGAACTGGGCAGAGAAAGGCGCTGAATGTCAGAGAATAGGTTTGATCGTATGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 90 bp | GGATATTACATCAAAGGAACATCGGTGGGGAAGAAAAACAGATCCTaGCACAGACACGTTAATCAGTTCAGGTCCTCGCACGGTGTCCAT | + |
|
Preference number: 1 (lower is better) Translates to: GYYIKGTSVGKKNRS*HRHVNQFRSSHGVH Trigger: ATGGACACCGTGCGAGGACCTGAACTGATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGATGTAATATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR CCA 90 bp | CACGCACCAAGCCTTAGTGACCACCACTCACTTTCTCCTATCCCTTaGAAGGAAGGCCTGGGTAATGGAAATCAGCACTTTAAAATTTAT | + |
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Preference number: 1 (lower is better) Translates to: HAPSLSDHHSLSPIP*KEGLGNGNQHFKIY Trigger: ATAAATTTTAAAGTGCTGATTTCCATTACCCAGGCCTTCCTTCCAAGGGATAGGAGAAAGTGAGTGGTGGTCACTAAGGCTTGGTGCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CCA 90 bp | TTAGTGACCACCACTCACTTTCTCCTATCCCTTGGAAGGAAGGCCTaGGTAATGGAAATCAGCACTTTAAAATTTATCTCCCAGCTTGTT | + |
|
Preference number: 1 (lower is better) Translates to: LVTTTHFLLSLGRKA*VMEISTLKFISQLV Trigger: AACAAGCTGGGAGATAAATTTTAAAGTGCTGATTTCCATTACCCAGGCCTTCCTTCCAAGGGATAGGAGAAAGTGAGTGGTGGTCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 90 bp | TCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATaGTACTTTTGTTGCAGTATTACACAAACGATTTGTGTCATCTAC | + |
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Preference number: 1 (lower is better) Translates to: SGPRTVSIVKNPRRR*YFCCSITQTICVIY Trigger: GTAGATGACACAAATCGTTTGTGTAATACTGCAACAAAAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR CCA 90 bp | TTATGGTATCCTTTGGAATTTCCCCAGCCTGTCTTTGATAATGCATaGACAAGTCTAGTAACCATGTCCAAAGGAAAACATGATGCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: LWYPLEFPQPVFDNA*TSLVTMSKGKHDAQ Trigger: CTGGGCATCATGTTTTCCTTTGGACATGGTTACTAGACTTGTCCATGCATTATCAAAGACAGGCTGGGGAAATTCCAAAGGATACCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 90 bp | CACAACATGAGGAACTATATTAAAGGATTGCAGAGTTCAGAAGGTTaGGAATCACATTATGGTATCCTTTGGAATTTCCCCAGCCTGTCT | + |
|
Preference number: 1 (lower is better) Translates to: HNMRNYIKGLQSSEG*ESHYGILWNFPSLS Trigger: AGACAGGCTGGGGAAATTCCAAAGGATACCATAATGTGATTCTCAACCTTCTGAACTCTGCAATCCTTTAATATAGTTCCTCATGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CCA 90 bp | AGTACTTGCTCACTTTTACAGGATATTACATCAAAGGAACATCGGTaGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCAGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: STCSLLQDITSKEHR*GRKTDPDTDTLISS Trigger: TGAACTGATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGATGTAATATCCTGTAAAAGTGAGCAAGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAGTGGATCTGAGCAGGGCACAGGTGGGCAGCAAGGATACACTTGGCTTTTTGAATGTCTGTGTATaGCTGCAAAGGCCCAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: KRVDLSRAQVGSKDTLGFLNVCV*LQRPRS Trigger: AGACCTGGGCCTTTGCAGTCATACACAGACATTCAA...AAAGCCAAGTGTATCCTTGCTGCCCACCTGTGCCCTGCTCAGATCCACTCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAGTGGATCTGAGCAGGGCACAGGTGGGCAGCAAGGATACACTTGGCTTTCTTTCTCCTATCCCTTaGAAGGAAGGCCTGGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: KRVDLSRAQVGSKDTLGFLSPIP*KEGLGN Trigger: ATTACCCAGGCCTTCCTTCCAAGGGATAGGAGAAAG...AAAGCCAAGTGTATCCTTGCTGCCCACCTGTGCCCTGCTCAGATCCACTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGTCACAGGGGTTGCATATCAGACATCTTGCACATCAGATATTTACAATTCAGAGGCTGCCTCCTaGAGAATGTGGCTCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GPVTGVAYQTSCTSDIYNSEAAS*RMWLKV Trigger: GACCTTGAGCCACATTCTCCAGGAGGCAGCCTCTGA...ATTGTAAATATCTGATGTGCAAGATGTCTGATATGCAACCCCTGTGACAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR-3UTR CCA 90 bp | GTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTATCACACACCGTGCATaGGTTTGGCTGTTGACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VSSTHTHFHCREISQTTLITHRA*VWLLTS Trigger: GCTGGTCAACAGCCAAACCCATGCACGGTGTGTGAT...AAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGGAACATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCGCACGGTGTCCATTGTaGAAAATCCCAGGAGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SKEHRWGRKTDPDTDTLIARCPL*KIPGED Trigger: ATCTTCTCCTGGGATTTTTCACAATGGACACCGTGC...GATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR-3UTR CCA 90 bp | ACAAACGATTTGTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCATCACACACCGTGCATaGGTTTGGCTGTTGACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TNDLCHLPTHIFTVEKFPITHRA*VWLLTS Trigger: GCTGGTCAACAGCCAAACCCATGCACGGTGTGTGAT...GGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR CAA 90 bp | CATTTGATTCCTCAACAGAGCAAGTGGCCTGAAAAGGAGAAGTACTaGCTCACTTTTACAGGATATTACATCAAAGGAACATCGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HLIPQQSKWPEKEKY*LTFTGYYIKGTSVG Trigger: CCCCACCGATGTTCCTTTGATGTAATATCCTGTAAAAGTGAGCAAGTACTTCTCCTTTTCAGGCCACTTGCTCTGTTGAGGAATCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCTGTCACAGGGGTTGCATATCAGACATCTTGCACATCAGATATTTACAAGCTAGTGTTTGGACTTaGTTTAGTTTTCTTCTGTCG | + |
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Preference number: 2 (lower is better) Translates to: GPCHRGCISDILHIRYLQASVWT*FSFLLS Trigger: CGACAGAAGAAAACTAAAGCAAGTCCAAACACTAGC...TTGTAAATATCTGATGTGCAAGATGTCTGATATGCAACCCCTGTGACAGGGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR-3UTR GCA 90 bp | ATACTTCTAATCCCTGCACATCTAGGTTTTGTGGTTCTACAGATTCTCAATTCACTCTATGTCAGAGGCTaGCTCCTGGAGAATGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ILLIPAHLGFVVLQILNSLYVRG*LLENVA Trigger: AGCCACATTCTCCAGGAGGCAGCCTCTGACATAGAG...TGAATTGAGAATCTGTAGAACCACAAAACCTAGATGTGCAGGGATTAGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTGGTTCTACAGATTCTCAATTCATGAAGGAGGGTCTATACTTCTACAAAGCCTCCTGGAGAATGTaGCTCAAGGTCCATGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: FCGSTDSQFMKEGLYFYKASWRM*LKVHGS Trigger: TGAGCCATGGACCTTGAGCCACATTCTCCAGGAGGC...TTTGTAGAAGTATAGACCCTCCTTCATGAATTGAGAATCTGTAGAACCACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CAA 90 bp | TCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTTaGTTGCAGTATTACACAAACGATTTGTGTCATCTACCCACACAC | + |
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Preference number: 2 (lower is better) Translates to: SHGVHCEKSQEKMIL*LQYYTNDLCHLPTH Trigger: GTGTGTGGGTAGATGACACAAATCGTTTGTGTAATACTGCAACAAAAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR-3UTR CCA 90 bp | ACCATGTCCAAAGGAAAACATGATGCCCAGATAAATGTCTGCATTTTCCTAGACCAGCAAGGATACACTTaGCTTTCAGGCACATACTCT | + |
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Preference number: 2 (lower is better) Translates to: TMSKGKHDAQINVCIFLDQQGYT*LSGTYS Trigger: AGAGTATGTGCCTGAAAGCCAAGTGTATCCTTGCTG...GTCTAGGAAAATGCAGACATTTATCTGGGCATCATGTTTTCCTTTGGACATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CAA 90 bp | AGGATTGCAGAGTTCAGAAGGTTGAGAATCACATTATGGTATCCTTaGGAATTTCCCCAGCCTGTCTTTGATAATGCATGGACAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: RIAEFRRLRITLWYP*EFPQPVFDNAWTSL Trigger: TAGACTTGTCCATGCATTATCAAAGACAGGCTGGGGAAATTCCAAAGGATACCATAATGTGATTCTCAACCTTCTGAACTCTGCAATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGTCACAGGGGTTGCATATCAGACATCTTGCACATCAGATATTTACAATGTCTTTGATAATGCATaGACAAGTCTAGTAACCATG | + |
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Preference number: 2 (lower is better) Translates to: GPVTGVAYQTSCTSDIYNVFDNA*TSLVTM Trigger: CATGGTTACTAGACTTGTCCATGCATTATCAAAGAC...ATTGTAAATATCTGATGTGCAAGATGTCTGATATGCAACCCCTGTGACAGGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CAA 90 bp | CACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTTTGTaGCAGTATTACACAAACGATTTGTGTCATCTACCCACACACATT | + |
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Preference number: 2 (lower is better) Translates to: HGVHCEKSQEKMILL*QYYTNDLCHLPTHI Trigger: AATGTGTGTGGGTAGATGACACAAATCGTTTGTGTAATACTGCAACAAAAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTGGTTCTACAGATTCTCAATTCATGAAGGAGGGTCTATACTTCTACAAACTTGGAAGGAAGGCCTaGGTAATGGAAATCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: FCGSTDSQFMKEGLYFYKLGRKA*VMEIST Trigger: AGTGCTGATTTCCATTACCCAGGCCTTCCTTCCAAG...TTTGTAGAAGTATAGACCCTCCTTCATGAATTGAGAATCTGTAGAACCACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CAA 90 bp | TCCCAGGAGAAGATGATACTTTTGTTGCAGTATTACACAAACGATTaGTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SQEKMILLLQYYTND*CHLPTHIFTVEKFP Trigger: GGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTTTGTGTAATACTGCAACAAAAGTATCATCTTCTCCTGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR-3UTR GCA 90 bp | GAAATCAGCACTTTAAAATTTATCTCCCAGCTTGTTAGGGCTGCCCTTATTGAACTAAGGAAAGGCAGTTaGATATATAACATAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: EISTLKFISQLVRAALIELRKGS*IYNIDL Trigger: AAGGTCTATGTTATATATGCAACTGCCTTTCCTTAG...TTCAATAAGGGCAGCCCTAACAAGCTGGGAGATAAATTTTAAAGTGCTGATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CCA 72 bp | TCTGAGCAGGGCACAGGTGGGCAGCAAGGATACACTTaGCTTTCAGGCACATACTCTCCACGCACCAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: SEQGTGGQQGYT*LSGTYSPRTKP Trigger: AGGCTTGGTGCGTGGAGAGTATGTGCCTGAAAGCCAAGTGTATCCTTGCTGCCCACCTGTGCCCTGCTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR-3UTR CAA 90 bp | AAAAGAGTGGATCTGAGCAGGGCACAGGTGGGCAGCAAGGATACACTTGGCTTTGAGCATGACAGCAGCTaGAAAGCAGACCCATGTCCC | + |
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Preference number: 3 (lower is better) Translates to: KRVDLSRAQVGSKDTLGFEHDSS*KADPCP Trigger: GGGACATGGGTCTGCTTTCAAGCTGCTGTCATGCTC...AAAGCCAAGTGTATCCTTGCTGCCCACCTGTGCCCTGCTCAGATCCACTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 72 bp | AAGGCCCAGGTCTGTTACCTGAGCATGACAGCAGCTTaGAAGCAGACCCATGTCCCCAAATTCCCATACGAT | + |
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Preference number: 3 (lower is better) Translates to: KAQVCYLSMTAA*KQTHVPKFPYD Trigger: ATCGTATGGGAATTTGGGGACATGGGTCTGCTTTCAAGCTGCTGTCATGCTCAGGTAACAGACCTGGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 72 bp | AGCAGCCCCATAATTTCCTATCTAAAAGAGTGGATCTaGGCAGGGCACAGGTGGGCAGCAAGGATACACTTG | + |
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Preference number: 3 (lower is better) Translates to: SSPIISYLKEWI*AGHRWAARIHL Trigger: CAAGTGTATCCTTGCTGCCCACCTGTGCCCTGCTCAGATCCACTCTTTTAGATAGGAAATTATGGGGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR-3UTR CAA 90 bp | AGTGACCACCACTCACTTTCTCCTATCCCTTGGAAGGAAGGCCTGGGTAATGGAAATTTATCTCCCAGCTaGTTAGGGCTGCCCTTATTG | + |
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Preference number: 3 (lower is better) Translates to: SDHHSLSPIPWKEGLGNGNLSPS*LGLPLL Trigger: CAATAAGGGCAGCCCTAACAAGCTGGGAGATAAATT...TCCATTACCCAGGCCTTCCTTCCAAGGGATAGGAGAAAGTGAGTGGTGGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR GCA 72 bp | GATCAAACCTATTCTCTGACATTCAGCGCCTTTCTCTaGCCAGTTCTATCACCCCTAACTCCCTTCCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: DQTYSLTFSAFL*PVLSPLTPFQV Trigger: TACCTGGAAGGGAGTTAGGGGTGATAGAACTGGGCAGAGAAAGGCGCTGAATGTCAGAGAATAGGTTTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 72 bp | ATCAAAGGAACATCGGTGGGGAAGAAAAACAGATCCTaGCACAGACACGTTAATCAGTTCAGGTCCTCGCAC | + |
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Preference number: 3 (lower is better) Translates to: IKGTSVGKKNRS*HRHVNQFRSSH Trigger: GTGCGAGGACCTGAACTGATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR TCA 72 bp | CTCAAAGACAAGGTACACAGTGACCCTGGGTACATTTaGTTCCTCAACAGAGCAAGTGGCCTGAAAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LKDKVHSDPGYI*FLNRASGLKRR Trigger: TCTCCTTTTCAGGCCACTTGCTCTGTTGAGGAATCAAATGTACCCAGGGTCACTGTGTACCTTGTCTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR TCA 72 bp | CTGGGTACATTTGATTCCTCAACAGAGCAAGTGGCCTaGAAAGGAGAAGTACTTGCTCACTTTTACAGGATA | + |
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Preference number: 3 (lower is better) Translates to: LGTFDSSTEQVA*KGEVLAHFYRI Trigger: TATCCTGTAAAAGTGAGCAAGTACTTCTCCTTTTCAGGCCACTTGCTCTGTTGAGGAATCAAATGTACCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR CCA 72 bp | ACCACTCACTTTCTCCTATCCCTTGGAAGGAAGGCCTaGGTAATGGAAATCAGCACTTTAAAATTTATCTCC | + |
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Preference number: 3 (lower is better) Translates to: TTHFLLSLGRKA*VMEISTLKFIS Trigger: GGAGATAAATTTTAAAGTGCTGATTTCCATTACCCAGGCCTTCCTTCCAAGGGATAGGAGAAAGTGAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 72 bp | GCATCTAAAGTTGTCAGAGACCTTTCTACATTCCATTaGCTGTCCTCTTATACGTTTCCCTGGGACAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: ASKVVRDLSTFH*LSSYTFPWDKR Trigger: TCTTTTGTCCCAGGGAAACGTATAAGAGGACAGTCAATGGAATGTAGAAAGGTCTCTGACAACTTTAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR CCA 72 bp | CCTTTGGAATTTCCCCAGCCTGTCTTTGATAATGCATaGACAAGTCTAGTAACCATGTCCAAAGGAAAACAT | + |
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Preference number: 3 (lower is better) Translates to: PLEFPQPVFDNA*TSLVTMSKGKH Trigger: ATGTTTTCCTTTGGACATGGTTACTAGACTTGTCCATGCATTATCAAAGACAGGCTGGGGAAATTCCAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 72 bp | CGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATaGTACTTTTGTTGCAGTATTACACAAACGATTTGT | + |
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Preference number: 3 (lower is better) Translates to: RTVSIVKNPRRR*YFCCSITQTIC Trigger: ACAAATCGTTTGTGTAATACTGCAACAAAAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR TCA 72 bp | ATGGACAAGTCTAGTAACCATGTCCAAAGGAAAACATaGTGCCCAGATAAATGTCTGCATTTTCCTAGACCA | + |
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Preference number: 3 (lower is better) Translates to: MDKSSNHVQRKT*CPDKCLHFPRP Trigger: TGGTCTAGGAAAATGCAGACATTTATCTGGGCATCATGTTTTCCTTTGGACATGGTTACTAGACTTGTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR GCA 72 bp | CTCAACAGAGCAAGTGGCCTGAAAAGGAGAAGTACTTaGTCACTTTTACAGGATATTACATCAAAGGAACAT | + |
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Preference number: 3 (lower is better) Translates to: LNRASGLKRRST*SLLQDITSKEH Trigger: ATGTTCCTTTGATGTAATATCCTGTAAAAGTGAGCAAGTACTTCTCCTTTTCAGGCCACTTGCTCTGTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| 3UTR TCA 72 bp | CATCTAGGTTTTGTGGTTCTACAGATTCTCAATTCATaGAGGAGGGTCTATACTTCTACAAAAAGGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: HLGFVVLQILNS*RRVYTSTKRHS Trigger: ACTGTGCCTTTTTGTAGAAGTATAGACCCTCCTTCATGAATTGAGAATCTGTAGAACCACAAAACCTAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| 3UTR TCA 72 bp | AGGAACTATATTAAAGGATTGCAGAGTTCAGAAGGTTaGGAATCACATTATGGTATCCTTTGGAATTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RNYIKGLQSSEG*ESHYGILWNFP Trigger: GGGGAAATTCCAAAGGATACCATAATGTGATTCTCAACCTTCTGAACTCTGCAATCCTTTAATATAGTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| 3UTR TCA 72 bp | GCAAGGAAAATAATTTTATGGTTGGTGATCACAACATaGGGAACTATATTAAAGGATTGCAGAGTTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ARKIILWLVITT*GTILKDCRVQK Trigger: CTTCTGAACTCTGCAATCCTTTAATATAGTTCCTCATGTTGTGATCACCAACCATAAAATTATTTTCCTTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGTGGATCTGAGCAGGGCACAGGTGGGCAGCAAGGATACACTTGGCTTTGTACCTGGCAAGTGCTaGTCCCTCTGTGATGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVDLSRAQVGSKDTLGFVPGKC*SLCDGP Trigger: AGGACCATCACAGAGGGAGCAGCACTTGCCAGGTAC...AAAGCCAAGTGTATCCTTGCTGCCCACCTGTGCCCTGCTCAGATCCACTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR GCA 90 bp | GACACGTTAATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGGTACCTGGCAAGTGCTaGTCCCTCTGTGATGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTLISSGPRTVSIVKNPRVPGKC*SLCDGP Trigger: AGGACCATCACAGAGGGAGCAGCACTTGCCAGGTAC...CCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATTAACGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | GACACGTTAATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGACCCCTCCATTCGAGTaGCCTTCTCTTCCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTLISSGPRTVSIVKNPRTPPFE*PSLPGL Trigger: AAGACCTGGAAGAGAAGGTCACTCGAATGGAGGGGT...CCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATTAACGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | GTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCATTGCAGGAGGTCCACTaGCCCCTCCATTCGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VEKFPRRLFLPILSCLWSLQEVH*PLHSSD Trigger: GTCACTCGAATGGAGGGGTCAGTGGACCTCCTGCAA...TGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| 3UTR CAA 72 bp | AAAGGCCCAGGTCTGTTACCTGAGCATGACAGCAGCTaGAAAGCAGACCCATGTCCCCAAATTCCCATACGA | + |
|
Preference number: 4 (lower is better) Translates to: KGPGLLPEHDSS*KADPCPQIPIR Trigger: TCGTATGGGAATTTGGGGACATGGGTCTGCTTTCAAGCTGCTGTCATGCTCAGGTAACAGACCTGGGCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR TCA 90 bp | TCTCTGCCCAGTTCTATCACCCCTAACTCCCTTCCAGGTATCACTCCAAAGAGCAGAGTCCTCATTCTCTaGTTCTTCAGACAGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSSITPNSLPGITPKSRVLIL*FFRQRA Trigger: GGCTCTCTGTCTGAAGAATCAGAGAATGAGGACTCT...GCTCTTTGGAGTGATACCTGGAAGGGAGTTAGGGGTGATAGAACTGGGCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGACCACCACTCACTTTCTCCTATCCCTTGGAAGGAAGGCCTGGGTAATCGTCAGAAAAGGAGCTaGACGCTCCATTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSDHHSLSPIPWKEGLGNRQKRS*TLHFPS Trigger: GGATGGAAAATGGAGCGTGCAGCTCCTTTTCTGACG...ATTACCCAGGCCTTCCTTCCAAGGGATAGGAGAAAGTGAGTGGTGGTCACTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR TCA 90 bp | AATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGGCATCAACTCTTGATTaGAATTCTGCCCGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQFRSSHGVHCEKSQEKMASTLD*NSARAA Trigger: TGCAGCCCGGGCAGAATTTCAATCAAGAGTTGATGC...CATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | ACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTTGCAGGAGGTCCACTaGCCCCTCCATTCGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: THTHFHCREISQTTLSPNLQEVH*PLHSSD Trigger: GTCACTCGAATGGAGGGGTCAGTGGACCTCCTGCAA...ATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| 3UTR CAA 72 bp | CCCCCTTCAATGGGTGAAAGGGCCCTGTCACAGGGGTaGCATATCAGACATCTTGCACATCAGATATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PPSMGERALSQG*HIRHLAHQIFT Trigger: TGTAAATATCTGATGTGCAAGATGTCTGATATGCAACCCCTGTGACAGGGCCCTTTCACCCATTGAAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR TCA 90 bp | AATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGGATAGCATCAACTCTTaGTTGAAATTCTGCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQFRSSHGVHCEKSQEKMDSINS*LKFCPG Trigger: GCCCGGGCAGAATTTCAATCAAGAGTTGATGCTATC...CATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | AATTCTCAGCTGTCTCTGGTCAAACACTCAAAAGGATCACACACCGTGCATGGGGATAGCATCAACTCTTaGTTGAAATTCTGCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSQLSLVKHSKGSHTVHGDSINS*LKFCPG Trigger: GCCCGGGCAGAATTTCAATCAAGAGTTGATGCTATC...CCCATGCACGGTGTGTGATCCTTTTGAGTGTTTGACCAGAGACAGCTGAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | CGCCTTTCTCTGCCCAGTTCTATCACCCCTAACTCCCTTCCAGGTATCACTCCATTCCTTTTCAATGGCTaGTACGATCACATTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLSLPSSITPNSLPGITPFLFNG*YDHIGN Trigger: ATTCCCAATGTGATCGTACCAGCCATTGAAAAGGAA...TGGAGTGATACCTGGAAGGGAGTTAGGGGTGATAGAACTGGGCAGAGAAAGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGTGGATCTGAGCAGGGCACAGGTGGGCAGCAAGGATACACTTGGCTTTGGATTTCCTTTTCAATaGCTGGTACGATCACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRVDLSRAQVGSKDTLGFGFPFQ*LVRSHW Trigger: CCAATGTGATCGTACCAGCCATTGAAAAGGAAATCC...AAAGCCAAGTGTATCCTTGCTGCCCACCTGTGCCCTGCTCAGATCCACTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR TCA 90 bp | TTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTAGAGTCCTCATTCTCTaGTTCTTCAGACAGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRSSHGVHCEKSQEKMILRVLIL*FFRQRA Trigger: GGCTCTCTGTCTGAAGAATCAGAGAATGAGGACTCT...AAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | CATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCAGTTCAGGTACAGCCGGTTTAACCTaGTTTCTGGATAGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HRWGRKTDPDTDTLISSGTAGLT*FLDSST Trigger: GGTGGAACTATCCAGAAATCAGGTTAAACCGGCTGT...ACCTGAACTGATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGAACATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCGCATCAACTCTTGATTaGAATTCTGCCCGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEHRWGRKTDPDTDTLIASTLD*NSARAA Trigger: TGCAGCCCGGGCAGAATTTCAATCAAGAGTTGATGC...GATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | GACACGTTAATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGGGGTTCCTCCAGAGCTaGAAATTCTGTTTCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTLISSGPRTVSIVKNPRGFLQS*KFCFNK Trigger: CTTATTGAAACAGAATTTTCAGCTCTGGAGGAACCC...CCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATTAACGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | CAATTCTCAGCTGTCTCTGGTCAAACACTCAAAAGGATCACACACCGTGCATGGAGATGTTTGGGTAGTTaGTCCTTGTTTCCGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFSAVSGQTLKRITHRAWRCLGS*SLFPSS Trigger: AGAGGACGGAAACAAGGACCAACTACCCAAACATCT...CCATGCACGGTGTGTGATCCTTTTGAGTGTTTGACCAGAGACAGCTGAGAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGAACATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCAGAGTCCTCATTCTCTaGTTCTTCAGACAGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKEHRWGRKTDPDTDTLIRVLIL*FFRQRA Trigger: GGCTCTCTGTCTGAAGAATCAGAGAATGAGGACTCT...GATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTTTGTTGCAGTGTAATTCCGTCATCTaGCACCACAGCAAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHGVHCEKSQEKMILLLQCNSVI*HHSKFA Trigger: GGCAAACTTGCTGTGGTGGCAGATGACGGAATTACA...CTGCAACAAAAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTTCTCACCAAAGTAACTaGCGTCACTCAACACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FRSSHGVHCEKSQEKMILSHQSN*RHSTPQ Trigger: TTGTGGTGTTGAGTGACGGCAGTTACTTTGGTGAGA...AAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGGGATTTCCTTTTCAATaGCTGGTACGATCACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQFRSSHGVHCEKSQEKMGFPFQ*LVRSHW Trigger: CCAATGTGATCGTACCAGCCATTGAAAAGGAAATCC...CATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCTTCTCCTTTGGCTCTTaGTCTTTGTTGCTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CREISQTTLSPNSQLSLVFSFGS*SLLLLL Trigger: CAACAGCAGCAACAAAGACCAAGAGCCAAAGGAGAA...GACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | CAATTCTCAGCTGTCTCTGGTCAAACACTCAAAAGGATCACACACCGTGCATGGCTTGTTTCCGTCCTCTaGAAGAACTCAAACATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QFSAVSGQTLKRITHRAWLVSVL*KNSNIR Trigger: TCGAATGTTTGAGTTCTTCCAGAGGACGGAAACAAG...CCATGCACGGTGTGTGATCCTTTTGAGTGTTTGACCAGAGACAGCTGAGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | ACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATATCCAGCACGGGAGGTaGAGTTTCACCAATGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: THTHFHCREISQTTLSPNIQHGR*SFTNGC Trigger: ACAACCATTGGTGAAACTCCACCTCCCGTGCTGGAT...ATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | AATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATCGGTCGGTATCACTaGCAGAACATCAAGTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQFRSSHGVHCEKSQEKMIGRYH*QNIKFK Trigger: TTTAAACTTGATGTTCTGTCAGTGATACCGACCGAT...CATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | TGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCGGGTTCCTCCAGAGCTaGAAATTCTGTTTCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: CREISQTTLSPNSQLSLVGFLQS*KFCFNK Trigger: CTTATTGAAACAGAATTTTCAGCTCTGGAGGAACCC...GACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTTTGTTGCAGTCTCACCAAAGTAACTaGCGTCACTCAACACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SHGVHCEKSQEKMILLLQSHQSN*RHSTPQ Trigger: TTGTGGTGTTGAGTGACGGCAGTTACTTTGGTGAGA...CTGCAACAAAAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | TCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTTTGTTGCAGTTCTCCTTTGGCTCTTaGTCTTTGTTGCTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHGVHCEKSQEKMILLLQFSFGS*SLLLLL Trigger: CAACAGCAGCAACAAAGACCAAGAGCCAAAGGAGAA...CTGCAACAAAAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCCATAGTTTTGGCATCTaGGTACTCTGTAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CREISQTTLSPNSQLSLVHSFGI*VLCKSF Trigger: GAAGCTCTTACAGAGTACCCAGATGCCAAAACTATG...GACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | TTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTATCGGTCGGTATCACTaGCAGAACATCAAGTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRSSHGVHCEKSQEKMILIGRYH*QNIKFK Trigger: TTTAAACTTGATGTTCTGTCAGTGATACCGACCGAT...AAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGATACTTTTGTTGCAGTATTACACAAACGATTTGTGTCATCTACCCACCCCTCCATTCGAGTaGCCTTCTCTTCCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKMILLLQYYTNDLCHLPTPPFE*PSLPGL Trigger: AAGACCTGGAAGAGAAGGTCACTCGAATGGAGGGGT...GGGTAGATGACACAAATCGTTTGTGTAATACTGCAACAAAAGTATCATCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TGTTGCAGTATTACACAAACGATTTGTGTCATCTACCCACACACATTTTCACTGCGTCAGAAAAGGAGCTaGACGCTCCATTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CCSITQTICVIYPHTFSLRQKRS*TLHFPS Trigger: GGATGGAAAATGGAGCGTGCAGCTCCTTTTCTGACG...CAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTTTGTGTAATACTGCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | ACAAACGATTTGTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCCGTCAGAAAAGGAGCTaGACGCTCCATTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TNDLCHLPTHIFTVEKFPRQKRS*TLHFPS Trigger: GGATGGAAAATGGAGCGTGCAGCTCCTTTTCTGACG...GGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTAAATTCTGCCCGGGCTaGATTCATATTGGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRSSHGVHCEKSQEKMILKFCPG*IHIGNH Trigger: ATGATTTCCAATATGAATGCAGCCCGGGCAGAATTT...AAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTGTCACTGCCCATATTTaGAATGTTTATATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRSSHGVHCEKSQEKMILVTAHI*NVYIQQ Trigger: CTGCTGGATATAAACATTGCAAATATGGGCAGTGAC...AAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGAACATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCCTTGTTTCCGTCCTCTaGAAGAACTCAAACATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SKEHRWGRKTDPDTDTLILVSVL*KNSNIR Trigger: TCGAATGTTTGAGTTCTTCCAGAGGACGGAAACAAG...GATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCAGTTCAGGTCCTCGCTGTTACCGACAATGGTaGCGAAAATTAAAACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGRKTDPDTDTLISSGPRCYRQW*RKLKLQ Trigger: TTGGAGTTTTAATTTTCGCCACCATTGTCGGTAACA...GCGAGGACCTGAACTGATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | GACACGTTAATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGTCATATTGGAAATCATaGAACCTATGTTACCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: DTLISSGPRTVSIVKNPRSYWKS*NLCYRQ Trigger: TTGTCGGTAACATAGGTTCCATGATTTCCAATATGA...CCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATTAACGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | CATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCAGTTCAGGTGGGCTGCATTCATATTaGAAATCATGGAACCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: HRWGRKTDPDTDTLISSGGLHSY*KSWNLC Trigger: ACATAGGTTCCATGATTTCCAATATGAATGCAGCCC...ACCTGAACTGATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | AGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCAAACACATAGTTTTGGCATCTaGGTACTCTGTAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RNFPDDSFSQFSAVSGQTHSFGI*VLCKSF Trigger: GAAGCTCTTACAGAGTACCCAGATGCCAAAACTATG...TGTTTGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TGTTGCAGTATTACACAAACGATTTGTGTCATCTACCCACACACATTTTCACTGTGTAATTCCGTCATCTaGCACCACAGCAAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCSITQTICVIYPHTFSLCNSVI*HHSKFA Trigger: GGCAAACTTGCTGTGGTGGCAGATGACGGAATTACA...CAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTTTGTGTAATACTGCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | AGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCAAACATTCCTTTTCAATGGCTaGTACGATCACATTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RNFPDDSFSQFSAVSGQTFLFNG*YDHIGN Trigger: ATTCCCAATGTGATCGTACCAGCCATTGAAAAGGAA...TGTTTGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGATACTTTTGTTGCAGTATTACACAAACGATTTGTGTCATCTACCCATCCAGCACGGGAGGTaGAGTTTCACCAATGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKMILLLQYYTNDLCHLPIQHGR*SFTNGC Trigger: ACAACCATTGGTGAAACTCCACCTCCCGTGCTGGAT...GGGTAGATGACACAAATCGTTTGTGTAATACTGCAACAAAAGTATCATCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCATGTTACCGACAATGGTaGCGAAAATTAAAACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VEKFPRRLFLPILSCLWSCYRQW*RKLKLQ Trigger: TTGGAGTTTTAATTTTCGCCACCATTGTCGGTAACA...TGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| 3UTR CAA 72 bp | GAGTTCAGAAGGTTGAGAATCACATTATGGTATCCTTaGGAATTTCCCCAGCCTGTCTTTGATAATGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EFRRLRITLWYP*EFPQPVFDNAW Trigger: CCATGCATTATCAAAGACAGGCTGGGGAAATTCCAAAGGATACCATAATGTGATTCTCAACCTTCTGAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
||
| CDS-3UTR GCA 90 bp | CATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCAGTTCAGGTTTTTATCATCGGCCTTaGTCTTCTTTTCCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRWGRKTDPDTDTLISSGFYHRP*SSFPSF Trigger: AAAAGAAGGAAAAGAAGAGCAAGGCCGATGATAAAA...ACCTGAACTGATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | GTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTGTCACTGCCCATATTTaGAATGTTTATATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSSTHTHFHCREISQTTLVTAHI*NVYIQQ Trigger: CTGCTGGATATAAACATTGCAAATATGGGCAGTGAC...AAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | ACAAACGATTTGTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCAGATGTTTGGGTAGTTaGTCCTTGTTTCCGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TNDLCHLPTHIFTVEKFPRCLGS*SLFPSS Trigger: AGAGGACGGAAACAAGGACCAACTACCCAAACATCT...GGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGAACATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCGAGTTCATCAAAACATaGTCTTGCAATAATCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: SKEHRWGRKTDPDTDTLIEFIKT*SCNNHR Trigger: ACGATGATTATTGCAAGAGCATGTTTTGATGAACTC...GATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | TCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTTTGTTGCAGTCATATTGGAAATCATaGAACCTATGTTACCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SHGVHCEKSQEKMILLLQSYWKS*NLCYRQ Trigger: TTGTCGGTAACATAGGTTCCATGATTTCCAATATGA...CTGCAACAAAAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | GTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTGAGTTCATCAAAACATaGTCTTGCAATAATCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSTHTHFHCREISQTTLEFIKT*SCNNHR Trigger: ACGATGATTATTGCAAGAGCATGTTTTGATGAACTC...AAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TGTTGCAGTATTACACAAACGATTTGTGTCATCTACCCACACACATTTTCACTGAAATTCTGCCCGGGCTaGATTCATATTGGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CCSITQTICVIYPHTFSLKFCPG*IHIGNH Trigger: ATGATTTCCAATATGAATGCAGCCCGGGCAGAATTT...CAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTTTGTGTAATACTGCAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CCA 90 bp | AACGATTTGTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCAGAGGGCTGCATTCATATTaGAAATCATGGAACCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: NDLCHLPTHIFTVEKFPRGLHSY*KSWNLC Trigger: ACATAGGTTCCATGATTTCCAATATGAATGCAGCCC...TCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CCA 90 bp | GAGAAGATGATACTTTTGTTGCAGTATTACACAAACGATTTGTGTCATCTACCCTTCCTTTTCAATGGCTaGTACGATCACATTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EKMILLLQYYTNDLCHLPFLFNG*YDHIGN Trigger: ATTCCCAATGTGATCGTACCAGCCATTGAAAAGGAA...GGGTAGATGACACAAATCGTTTGTGTAATACTGCAACAAAAGTATCATCTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR GCA 90 bp | TTGTTGCAGTATTACACAAACGATTTGTGTCATCTACCCACACACATTTTCACTTTTTATCATCGGCCTTaGTCTTCTTTTCCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQYYTNDLCHLPTHIFTFYHRP*SSFPSF Trigger: AAAAGAAGGAAAAGAAGAGCAAGGCCGATGATAAAA...AGTGAAAATGTGTGTGGGTAGATGACACAAATCGTTTGTGTAATACTGCAACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS TCA 90 bp | ATATTCAGCCAAGATACGGGCAAATCGCGTTTGCAGGAGGTCCACTaGCCCCTCCATTCGAGTGACCTTCTCTTCCAGGTCTTTAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IFSQDTGKSRLQEVH*PLHSSDLLFQVFRV Trigger: GACCCTAAAGACCTGGAAGAGAAGGTCACTCGAATGGAGGGGTCAGTGGACCTCCTGCAAACGCGATTTGCCCGTATCTTGGCTGAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087213.12 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS GCA 90 bp | CTGCTGTTGTTGACATTGAAAAGAGCCATAGTACCTGGCAAGTGCTaGTCCCTCTGTGATGGTCCTCGCCTTTTGTACGAGTTGCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLTLKRAIVPGKC*SLCDGPRLLYELLL Trigger: TAGAAGCAACTCGTACAAAAGGCGAGGACCATCACAGAGGGAGCAGCACTTGCCAGGTACTATGGCTCTTTTCAATGTCAACAACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS GCA 90 bp | TTGCTGCTGTTGTTGACATTGAAAAGAGCCATAGTACCTGGCAAGTaGTGCTCCCTCTGTGATGGTCCTCGCCTTTTGTACGAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLTLKRAIVPGK*CSLCDGPRLLYELL Trigger: AAGCAACTCGTACAAAAGGCGAGGACCATCACAGAGGGAGCAGCACTTGCCAGGTACTATGGCTCTTTTCAATGTCAACAACAGCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CCA 90 bp | AGGAGCTGCACGCTCCATTTTCCATCCGCCGGATTTCCTTTTCAATaGCTGGTACGATCACATTGGGAATATTTACGAAGGAATGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RSCTLHFPSAGFPFQ*LVRSHWEYLRRNAT Trigger: CGTGGCATTCCTTCGTAAATATTCCCAATGTGATCGTACCAGCCATTGAAAAGGAAATCCGGCGGATGGAAAATGGAGCGTGCAGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | GACACGTTAATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGCCAGGTAACCTGTCCTaGTTCGTACAAACATATCGG | + |
|
Preference number: 5 (lower is better) Translates to: DTLISSGPRTVSIVKNPRPGNLS*FVQTYR Trigger: CCGATATGTTTGTACGAACAAGGACAGGTTACCTGG...CCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATTAACGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | CAATTCTCAGCTGTCTCTGGTCAAACACTCAAAAGGATCACACACCGTGCATGGCCGATGCTCTTAATGTaGGCTGTTCTTCGGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QFSAVSGQTLKRITHRAWPMLLM*AVLRLP Trigger: TGGCAACCGAAGAACAGCCAACATTAAGAGCATCGG...CCATGCACGGTGTGTGATCCTTTTGAGTGTTTGACCAGAGACAGCTGAGAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | AATTCTCAGCTGTCTCTGGTCAAACACTCAAAAGGATCACACACCGTGCATGGGATTTCTGCCCTTAGTTaGTCAGGGAGGTATCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSQLSLVKHSKGSHTVHGISALS*SGRYLR Trigger: CCTGAGATACCTCCCTGACAAACTAAGGGCAGAAAT...CCCATGCACGGTGTGTGATCCTTTTGAGTGTTTGACCAGAGACAGCTGAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | TTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGATACTTCCGATGCTCTTAATGTaGGCTGTTCTTCGGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRSSHGVHCEKSQEKMILPMLLM*AVLRLP Trigger: TGGCAACCGAAGAACAGCCAACATTAAGAGCATCGG...AAGTATCATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS CCA 90 bp | GCTGCACGCTCCATTTTCCATCCGCCGGATTTCCTTTTCAATGGCTaGTACGATCACATTGGGAATATTTACGAAGGAATGCCACGTATT | + |
|
Preference number: 5 (lower is better) Translates to: AARSIFHPPDFLFNG*YDHIGNIYEGMPRI Trigger: AATACGTGGCATTCCTTCGTAAATATTCCCAATGTGATCGTACCAGCCATTGAAAAGGAAATCCGGCGGATGGAAAATGGAGCGTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | TTAGTGACCACCACTCACTTTCTCCTATCCCTTGGAAGGAAGGCCTGGGTAATGCTGCTGTTGTTGACATaGAAAAGAGCCATAGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTHFLLSLGRKAWVMLLLLT*KRAIVP Trigger: AGGTACTATGGCTCTTTTCAATGTCAACAACAGCAG...CATTACCCAGGCCTTCCTTCCAAGGGATAGGAGAAAGTGAGTGGTGGTCACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| CDS-3UTR CAA 90 bp | GAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCAAACATTTCTGCCCTTAGTTaGTCAGGGAGGTATCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EKFPRRLFLPILSCLWSNISALS*SGRYLR Trigger: CCTGAGATACCTCCCTGACAAACTAAGGGCAGAAAT...GTTTGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | AATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGCTGCTGTTGTTGACATaGAAAAGAGCCATAGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: NQFRSSHGVHCEKSQEKMLLLLT*KRAIVP Trigger: AGGTACTATGGCTCTTTTCAATGTCAACAACAGCAG...CATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | CCAGTTCTATCACCCCTAACTCCCTTCCAGGTATCACTCCAAAGAGCACATCCATTGTTGCTGCTGTTGTaGACATTGAAAAGAGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PVLSPLTPFQVSLQRAHPLLLLL*TLKRAI Trigger: TATGGCTCTTTTCAATGTCAACAACAGCAGCAACAA...TGGATGTGCTCTTTGGAGTGATACCTGGAAGGGAGTTAGGGGTGATAGAACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126799.4 |
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| CDS-3UTR CAA 90 bp | GAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCAAACTTTGGCTCTTGGTCTTaGTTGCTGCTGTTGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: EKFPRRLFLPILSCLWSNFGSWS*LLLLLT Trigger: TGTCAACAACAGCAGCAACAAAGACCAAGAGCCAAA...GTTTGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | TGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCTTTGGCTCTTGGTCTTaGTTGCTGCTGTTGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CREISQTTLSPNSQLSLVFGSWS*LLLLLT Trigger: TGTCAACAACAGCAGCAACAAAGACCAAGAGCCAAA...GACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | AATTCTCAGCTGTCTCTGGTCAAACACTCAAAAGGATCACACACCGTGCATGGGATAATCATCGTCCAGTaGTACATCACAGGCAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSQLSLVKHSKGSHTVHGIIIVQ*YITGKV Trigger: CACTTTGCCTGTGATGTACAACTGGACGATGATTAT...CCCATGCACGGTGTGTGATCCTTTTGAGTGTTTGACCAGAGACAGCTGAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCAATAATCATCGTCCAGTaGTACATCACAGGCAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VEKFPRRLFLPILSCLWSIIIVQ*YITGKV Trigger: CACTTTGCCTGTGATGTACAACTGGACGATGATTAT...TGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | ACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATCCAGGTAACCTGTCCTaGTTCGTACAAACATATCGG | + |
|
Preference number: 5 (lower is better) Translates to: THTHFHCREISQTTLSPNPGNLS*FVQTYR Trigger: CCGATATGTTTGTACGAACAAGGACAGGTTACCTGG...ATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | GACACGTTAATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAACTGCAGGTTTGCTTaGTATTTCTCTATGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DTLISSGPRTVSIVKNPRNCRFA*YFSMSF Trigger: GAAACTCATAGAGAAATACAAAGCAAACCTGCAGTT...CCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATTAACGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | AGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCAAACGGGCTGCATTCATATaGGAAATCATGGAACCTATG | + |
|
Preference number: 5 (lower is better) Translates to: REISQTTLSPNSQLSLVKRAAFI*EIMEPM Trigger: CATAGGTTCCATGATTTCCAATATGAATGCAGCCCG...TTTGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | GTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCAGGTCACTGCCCATATTaGCAATGTTTATATCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VEKFPRRLFLPILSCLWSGHCPY*QCLYPA Trigger: TGCTGGATATAAACATTGCAAATATGGGCAGTGACC...TGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS TCA 90 bp | TCGCCTTTTGTACGAGTTGCTTCTAAAGAAAGAGTCCTCATTCTCTaGTTCTTCAGACAGAGAGCCATTGTCATCGTCAGAAAAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPFVRVASKERVLIL*FFRQRAIVIVRKGA Trigger: AGCTCCTTTTCTGACGATGACAATGGCTCTCTGTCTGAAGAATCAGAGAATGAGGACTCTTTCTTTAGAAGCAACTCGTACAAAAGGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | GAGAAATTTCCCAGACGACTCTTTCTCCCAATTCTCAGCTGTCTCTGGTCAAACTTTTCTTTTTCTCCTTaGGCTCTTGGTCTTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EKFPRRLFLPILSCLWSNFSFSP*ALGLCC Trigger: GCAACAAAGACCAAGAGCCAAAGGAGAAAAAGAAAA...GTTTGACCAGAGACAGCTGAGAATTGGGAGAAAGAGTCGTCTGGGAAATTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | CATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCAGTTCAGGTTTTTCTTTTTCTCCTTaGGCTCTTGGTCTTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRWGRKTDPDTDTLISSGFSFSP*ALGLCC Trigger: GCAACAAAGACCAAGAGCCAAAGGAGAAAAAGAAAA...ACCTGAACTGATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | AATCAGTTCAGGTCCTCGCACGGTGTCCATTGTGAAAAATCCCAGGAGAAGATGTTTTTATCATCGGCCTaGCTCTTCTTTTCCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NQFRSSHGVHCEKSQEKMFLSSA*LFFSFF Trigger: AAAGAAGGAAAAGAAGAGCAAGGCCGATGATAAAAA...CATCTTCTCCTGGGATTTTTCACAATGGACACCGTGCGAGGACCTGAACTGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | AATTCTCAGCTGTCTCTGGTCAAACACTCAAAAGGATCACACACCGTGCATGGGAACTGCAGGTTTGCTTaGTATTTCTCTATGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSQLSLVKHSKGSHTVHGNCRFA*YFSMSF Trigger: GAAACTCATAGAGAAATACAAAGCAAACCTGCAGTT...CCCATGCACGGTGTGTGATCCTTTTGAGTGTTTGACCAGAGACAGCTGAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | ACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATCGGGCTGCATTCATATaGGAAATCATGGAACCTATG | + |
|
Preference number: 5 (lower is better) Translates to: THTHFHCREISQTTLSPNRAAFI*EIMEPM Trigger: CATAGGTTCCATGATTTCCAATATGAATGCAGCCCG...ATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGAACATCGGTGGGGAAGAAAAACAGATCCTGACACAGACACGTTAATCGGTCACTGCCCATATTaGCAATGTTTATATCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SKEHRWGRKTDPDTDTLIGHCPY*QCLYPA Trigger: TGCTGGATATAAACATTGCAAATATGGGCAGTGACC...GATTAACGTGTCTGTGTCAGGATCTGTTTTTCTTCCCCACCGATGTTCCTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
||
| CDS-3UTR CAA 90 bp | GTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTCTGCTGTTGTTGACATaGAAAAGAGCCATAGTACCT | + |
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Preference number: 5 (lower is better) Translates to: VSSTHTHFHCREISQTTLLLLLT*KRAIVP Trigger: AGGTACTATGGCTCTTTTCAATGTCAACAACAGCAG...AAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | ACCCACACACATTTTCACTGTAGAGAAATTTCCCAGACGACTCTTTCTCCCAATTTTTTATCATCGGCCTaGCTCTTCTTTTCCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: THTHFHCREISQTTLSPNFLSSA*LFFSFF Trigger: AAAGAAGGAAAAGAAGAGCAAGGCCGATGATAAAAA...ATTGGGAGAAAGAGTCGTCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS-3UTR CAA 90 bp | AACGATTTGTGTCATCTACCCACACACATTTTCACTGTAGAGAAATTTCCCAGATTGTTGCTGCTGTTGTaGACATTGAAAAGAGCCATA | + |
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Preference number: 5 (lower is better) Translates to: NDLCHLPTHIFTVEKFPRLLLLL*TLKRAI Trigger: TATGGCTCTTTTCAATGTCAACAACAGCAGCAACAA...TCTGGGAAATTTCTCTACAGTGAAAATGTGTGTGGGTAGATGACACAAATCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087213.12 ENSMUST00000201463.4 |
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| CDS TCA 72 bp | CAAGATACGGGCAAATCGCGTTTGCAGGAGGTCCACTaGCCCCTCCATTCGAGTGACCTTCTCTTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QDTGKSRLQEVH*PLHSSDLLFQV Trigger: GACCTGGAAGAGAAGGTCACTCGAATGGAGGGGTCAGTGGACCTCCTGCAAACGCGATTTGCCCGTATCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087213.12 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS GCA 72 bp | CAGACAGAGAGCCATTGTCATCGTCAGAAAAGGAGCTaGACGCTCCATTTTCCATCCGCCGGATTTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QTESHCHRQKRS*TLHFPSAGFPF Trigger: AAAAGGAAATCCGGCGGATGGAAAATGGAGCGTGCAGCTCCTTTTCTGACGATGACAATGGCTCTCTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS GCA 72 bp | TTGACATTGAAAAGAGCCATAGTACCTGGCAAGTGCTaGTCCCTCTGTGATGGTCCTCGCCTTTTGTACGAG | + |
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Preference number: 6 (lower is better) Translates to: LTLKRAIVPGKC*SLCDGPRLLYE Trigger: CTCGTACAAAAGGCGAGGACCATCACAGAGGGAGCAGCACTTGCCAGGTACTATGGCTCTTTTCAATGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CAA 72 bp | GGCAAGTGCTGCTCCCTCTGTGATGGTCCTCGCCTTTaGTACGAGTTGCTTCTAAAGAAAGAGTCCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: GKCCSLCDGPRL*YELLLKKESSF Trigger: GAATGAGGACTCTTTCTTTAGAAGCAACTCGTACAAAAGGCGAGGACCATCACAGAGGGAGCAGCACTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS GCA 72 bp | TTGTTGACATTGAAAAGAGCCATAGTACCTGGCAAGTaGTGCTCCCTCTGTGATGGTCCTCGCCTTTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LLTLKRAIVPGK*CSLCDGPRLLY Trigger: GTACAAAAGGCGAGGACCATCACAGAGGGAGCAGCACTTGCCAGGTACTATGGCTCTTTTCAATGTCAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CAA 90 bp | ATAGTACCTGGCAAGTGCTGCTCCCTCTGTGATGGTCCTCGCCTTTaGTACGAGTTGCTTCTAAAGAAAGAGTCCTCATTCTCTGATTCT | + |
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Preference number: 6 (lower is better) Translates to: IVPGKCCSLCDGPRL*YELLLKKESSFSDS Trigger: AGAATCAGAGAATGAGGACTCTTTCTTTAGAAGCAACTCGTACAAAAGGCGAGGACCATCACAGAGGGAGCAGCACTTGCCAGGTACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CCA 72 bp | ACGCTCCATTTTCCATCCGCCGGATTTCCTTTTCAATaGCTGGTACGATCACATTGGGAATATTTACGAAGG | + |
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Preference number: 6 (lower is better) Translates to: TLHFPSAGFPFQ*LVRSHWEYLRR Trigger: CCTTCGTAAATATTCCCAATGTGATCGTACCAGCCATTGAAAAGGAAATCCGGCGGATGGAAAATGGAGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CAA 72 bp | TGCTCCCTCTGTGATGGTCCTCGCCTTTTGTACGAGTaGCTTCTAAAGAAAGAGTCCTCATTCTCTGATTCT | + |
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Preference number: 6 (lower is better) Translates to: CSLCDGPRLLYE*LLKKESSFSDS Trigger: AGAATCAGAGAATGAGGACTCTTTCTTTAGAAGCAACTCGTACAAAAGGCGAGGACCATCACAGAGGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS TCA 72 bp | GTACGAGTTGCTTCTAAAGAAAGAGTCCTCATTCTCTaGTTCTTCAGACAGAGAGCCATTGTCATCGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VRVASKERVLIL*FFRQRAIVIVR Trigger: TCTGACGATGACAATGGCTCTCTGTCTGAAGAATCAGAGAATGAGGACTCTTTCTTTAGAAGCAACTCGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CAA 72 bp | CGCCGGATTTCCTTTTCAATGGCTGGTACGATCACATaGGGAATATTTACGAAGGAATGCCACGTATTGATA | + |
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Preference number: 6 (lower is better) Translates to: RRISFSMAGTIT*GIFTKECHVLI Trigger: TATCAATACGTGGCATTCCTTCGTAAATATTCCCAATGTGATCGTACCAGCCATTGAAAAGGAAATCCGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000135701.2 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CAA 90 bp | TTTTCCATCCGCCGGATTTCCTTTTCAATGGCTGGTACGATCACATaGGGAATATTTACGAAGGAATGCCACGTATTGATAATATTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FSIRRISFSMAGTIT*GIFTKECHVLIIFV Trigger: GACAAATATTATCAATACGTGGCATTCCTTCGTAAATATTCCCAATGTGATCGTACCAGCCATTGAAAAGGAAATCCGGCGGATGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087213.12 ENSMUST00000126799.4 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CAA 72 bp | TCATCAAAACATGCTCTTGCAATAATCATCGTCCAGTaGTACATCACAGGCAAAGTGATACAAAACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSKHALAIIIVQ*YITGKVIQNSQ Trigger: CTGGCTGTTTTGTATCACTTTGCCTGTGATGTACAACTGGACGATGATTATTGCAAGAGCATGTTTTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087213.12 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS TCA 72 bp | CGGCAAGATAGACTACATCTGATACGTAATCAAAAATaGGCCAGTATTCTAGGTAATCAGACTGGAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RQDRLHLIRNQK*ASILGNQTGVH Trigger: ATGAACTCCAGTCTGATTACCTAGAATACTGGCTCATTTTTGATTACGTATCAGATGTAGTCTATCTTGCCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087213.12 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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| CDS CCA 72 bp | TCATATTGGAAATCATGGAACCTATGTTACCGACAATaGTGGCGAAAATTAAAACTCCAATTAAGAAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: SYWKSWNLCYRQ*WRKLKLQLRSL Trigger: TAGACTTCTTAATTGGAGTTTTAATTTTCGCCACCATTGTCGGTAACATAGGTTCCATGATTTCCAATATGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087213.12 ENSMUST00000169997.6 ENSMUST00000201463.4 |
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