Pregenerated sensors for CNEP1R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036810Ensembl transcript IDs: ENSMUST00000095214.10, ENSMUST00000117775.2, ENSMUST00000121097.8, ENSMUST00000127490.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCTCTGCCTTCACTCTTGGCTCTTCTGCCTCAGTTCCTGAGTACTaGGGTTACAGGTGTGGGCCAACATCCAGACCTAAAGCACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: GSAFTLGSSASVPEY*GYRCGPTSRPKAPR Trigger: TCTGGGTGCTTTAGGTCTGGATGTTGGCCCACACCTGTAACCTCAGTACTCAGGAACTGAGGCAGAAGAGCCAAGAGTGAAGGCAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR CCA 90 bp | TCAACACTCTCCAGCAGAGAGAGCTGCAGGCTCTGGTTTGTAGTGTaGTTCTGTGTTACTAGTGATGGACGGGGCCCATCAGCTACACCA | + |
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Preference number: 1 (lower is better) Translates to: STLSSRESCRLWFVV*FCVTSDGRGPSATP Trigger: TGGTGTAGCTGATGGGCCCCGTCCATCACTAGTAACACAGAACCACACTACAAACCAGAGCCTGCAGCTCTCTCTGCTGGAGAGTGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR CCA 90 bp | CACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCTGCAGGCTCTaGTTTGTAGTGTGGTTCTGTGTTACTAGTGATGGACGGGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: HSMPSTLSSRESCRL*FVVWFCVTSDGRGP Trigger: TGGGCCCCGTCCATCACTAGTAACACAGAACCACACTACAAACCAGAGCCTGCAGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR TCA 90 bp | CTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAAGCCTaGCTAAAGGGTTTCAGGTATAGGCTTGTTTTGTGCAGACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: LCLLRAGVKGVCQQA*LKGFRYRLVLCRQG Trigger: ACCCTGTCTGCACAAAACAAGCCTATACCTGAAACCCTTTAGTCAGGCTTGTTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR TCA 90 bp | GAGTGGCTTTGTTTTATGCCATGCTCCACGCCATGCTCTATGCCATaGCGGGCTGCCTTACCACAGTCAAAACACAACTGGACCAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: EWLCFMPCSTPCSMP*RAALPQSKHNWTSQ Trigger: TTGACTGGTCCAGTTGTGTTTTGACTGTGGTAAGGCAGCCCGTCATGGCATAGAGCATGGCGTGGAGCATGGCATAAAACAAAGCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR GCA 90 bp | GAGATGAGTGGCTTTGTTTTATGCCATGCTCCACGCCATGCTCTATaGCATGACGGGCTGCCTTACCACAGTCAAAACACAACTGGACCA | + |
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Preference number: 1 (lower is better) Translates to: EMSGFVLCHAPRHAL*HDGLPYHSQNTTGP Trigger: TGGTCCAGTTGTGTTTTGACTGTGGTAAGGCAGCCCGTCATGGCATAGAGCATGGCGTGGAGCATGGCATAAAACAAAGCCACTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR GCA 90 bp | TTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCTaGAGGCTCTGGTTTGTAGTGTGGTTCTGTGTTACTAGTGATGGA | + |
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Preference number: 1 (lower is better) Translates to: LRIHSMPSTLSSRES*RLWFVVWFCVTSDG Trigger: TCCATCACTAGTAACACAGAACCACACTACAAACCAGAGCCTGCAGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR TCA 90 bp | AGGCTAGCCCCATATTTGTATACTGCTAAGAAGAGCCTTCAACTTTaGTCTTCCTGCTTCCACCTCTCAAGTGCTGGGATCACAGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: RLAPYLYTAKKSLQL*SSCFHLSSAGITGV Trigger: GACACCTGTGATCCCAGCACTTGAGAGGTGGAAGCAGGAAGATCAAAGTTGAAGGCTCTTCTTAGCAGTATACAAATATGGGGCTAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR GCA 90 bp | TTCCGACAGTTTTATTTTAAGGGCTACTGTAGTACACGTGGCTGTTaGGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: FRQFYFKGYCSTRGC*AYTVCHQHSPAERA Trigger: AGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACAGTAGCCCTTAAAATAAAACTGTCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR CCA 90 bp | CGGGCTGCCTTACCACAGTCAAAACACAACTGGACCAGTCAATCATaGTCTGAAACCTCTAAAATCCCGAGTCAAGACAAATCTCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: RAALPQSKHNWTSQS*SETSKIPSQDKSQV Trigger: TACCTGAGATTTGTCTTGACTCGGGATTTTAGAGGTTTCAGACCATGATTGACTGGTCCAGTTGTGTTTTGACTGTGGTAAGGCAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR CCA 90 bp | AACGTGGTCAAAGGAAAATTCCCAATGCAAGTCAGGCGTCTGTTATaGTTTAGCCGTGATTCGTTGCTCCCAAAGGCTCAAGTGTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: NVVKGKFPMQVRRLL*FSRDSLLPKAQVLK Trigger: CTTTAACACTTGAGCCTTTGGGAGCAACGAATCACGGCTAAACCATAACAGACGCCTGACTTGCATTGGGAATTTTCCTTTGACCACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR CCA 90 bp | CAATTTAATTCCAGTGGGAAACAAACACACACACAGTATGAAGGATaGCAAAACAACTGTATGTCAGATAGGGGGTTAATTTACAATGCA | + |
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Preference number: 1 (lower is better) Translates to: QFNSSGKQTHTQYEG*QNNCMSDRGLIYNA Trigger: TGCATTGTAAATTAACCCCCTATCTGACATACAGTTGTTTTGCCATCCTTCATACTGTGTGTGTGTTTGTTTCCCACTGGAATTAAATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCACGGCAGCTGGGGCCTAGTCGGAGGATACCGGCCACCAAGGGGAGAGACTAGTGGCTTTGTTTTATaGCATGCTCCACGCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: SHGSWGLVGGYRPPRGETSGFVL*HAPRHA Trigger: AGCATGGCGTGGAGCATGGCATAAAACAAAGCCACT...AGTCTCTCCCCTTGGTGGCCGGTATCCTCCGACTAGGCCCCAGCTGCCGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATCAACACTCTCCAGCAGAGAGAGCTGCAGGCTCTGGTTTGTAGTGTGGTTAAGGTACTGAGGCGCTaGGAGCTCAGCCAGCATCAT | + |
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Preference number: 2 (lower is better) Translates to: AINTLQQRELQALVCSVVKVLRR*ELSQHH Trigger: ATGATGCTGGCTGAGCTCGCAGCGCCTCAGTACCTT...AACCACACTACAAACCAGAGCCTGCAGCTCTCTCTGCTGGAGAGTGTTGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CCA 90 bp | AACCAAGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAACCACCTCTCAAGTGCTaGGATCACAGGTGTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: NQACLCLLRAGVKGVCQQPPLKC*DHRCPP Trigger: TGGTGGACACCTGTGATCCCAGCACTTGAGAGGTGG...TTGTTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCTTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAAGCCGACAGGGTATTGCTATaGTTAAGACCCAGGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: QACLCLLRAGVKGVCQQADRVLL*LRPRQV Trigger: GACCTGCCTGGGTCTTAACCATAGCAATACCCTGTC...GGCTTGTTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR-3UTR GCA 90 bp | AACCAAGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAACTTCCACCTCTCAAGTaGTGGGATCACAGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: NQACLCLLRAGVKGVCQQLPPLK*WDHRCP Trigger: TGGACACCTGTGATCCCAGCACTTGAGAGGTGGAAG...TTGTTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCTTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR-3UTR TCA 90 bp | GTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAGTTCTGTGCAGGGGCTaGAGTGCTGAAGTGACACTA | + |
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Preference number: 2 (lower is better) Translates to: VHVAVAHTQYAINTLQQRVLCRG*SAEVTL Trigger: TAGTGTCACTTCAGCACTTCAGCCCCTGCACAGAAC...TCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR TCA 90 bp | ACATACAGGTTTGAGACCAGCTTCAATAACAGTGAATTCCAGGCCAGCCTAGGCCTTGTCTCTGTCTCCTaGGGGCTGGGGTCAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TYRFETSFNNSEFQASLGLVSVS*GLGSKV Trigger: CACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAG...GCCTAGGCTGGCCTGGAATTCACTGTTATTGAAGCTGGTCTCAAACCTGTATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGATTCGTTGCTCCCAAAGGCTCAAGTGTTAAAGGGTTGGTCCCGAGCCATTCTTCCACCTCTCAAGTaGTGGGATCACAGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RDSLLPKAQVLKGWSRAILPPLK*WDHRCP Trigger: TGGACACCTGTGATCCCAGCACTTGAGAGGTGGAAG...AATGGCTCGGGACCAACCCTTTAACACTTGAGCCTTTGGGAGCAACGAATCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR GCA 90 bp | GGCACATTCATAGCCAGGGGAGTGGGACTCAGTCAGAGGATACAGGCCACTGAGCTTTGTTTTATGCCATaGTCCACGCCATGCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: GTFIARGVGLSQRIQATELCFMP*STPCSM Trigger: CATAGAGCATGGCGTGGAGCATGGCATAAAACAAAG...CTCAGTGGCCTGTATCCTCTGACTGAGTCCCACTCCCCTGGCTATGAATGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAGTAATACCCACATACTTCATCCGCAGAGTTCTGTGCAGGGGCTGAAGTGCGTTCTGTGCAGGGGCTaGAGTGCTGAAGTGACACTA | + |
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Preference number: 2 (lower is better) Translates to: LSNTHILHPQSSVQGLKCVLCRG*SAEVTL Trigger: TAGTGTCACTTCAGCACTTCAGCCCCTGCACAGAAC...GCACTTCAGCCCCTGCACAGAACTCTGCGGATGAAGTATGTGGGTATTACTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAAGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAAGGTTTCCTGTGGTGCTaGAAAGCAAACCTAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: NQACLCLLRAGVKGVCQQGFLWC*KANLRL Trigger: AAGCCTTAGGTTTGCTTTTCAGCACCACAGGAAACC...TTGTTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCTTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAAACCAAGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAGTCCACCATCATACCTaGTTTCCTGTGGTGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CKPSLSLSPEGWGQRCVPVHHHT*FPVVLK Trigger: TTTCAGCACCACAGGAAACCAGGTATGATGGTGGAC...TGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCTTGGTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR-3UTR CCA 90 bp | AACCAAGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAAGTCCACCATCATACCTaGTTTCCTGTGGTGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: NQACLCLLRAGVKGVCQQVHHHT*FPVVLK Trigger: TTTCAGCACCACAGGAAACCAGGTATGATGGTGGAC...TTGTTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCTTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR CAA 90 bp | TTCCCAATGCAAGTCAGGCGTCTGTTATGGTTTAGCCGTGATTCGTaGCTCCCAAAGGCTCAAGTGTTAAAGGGTTGGTCCCGAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: FPMQVRRLLWFSRDS*LPKAQVLKGWSRAI Trigger: AATGGCTCGGGACCAACCCTTTAACACTTGAGCCTTTGGGAGCAACGAATCACGGCTAAACCATAACAGACGCCTGACTTGCATTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCACTCTTGGCTCTTCTGCCTCAGTTCCTGAGTACTGAGGTTACAGGTGTGAAGAGCCTTCAACTTTaGTCTTCCTGCTTCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: PSLLALLPQFLSTEVTGVKSLQL*SSCFHL Trigger: GAGGTGGAAGCAGGAAGATCAAAGTTGAAGGCTCTT...CACACCTGTAACCTCAGTACTCAGGAACTGAGGCAGAAGAGCCAAGAGTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR GCA 90 bp | GTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAAGTACACGTGGCTGTTaGGCATACACAGTATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VHVAVAHTQYAINTLQQRSTRGC*AYTVCH Trigger: ATGGCATACTGTGTATGCGCAACAGCCACGTGTACT...TCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCTGAGATGTCAAGCAGATaGTTCCTCAAATACTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RGCCAYTVCHQHSPAERAEMSSR*FLKYWC Trigger: GCACCAGTATTTGAGGAACCATCTGCTTGACATCTC...AGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATTCCTGAACCCTTCACTGTCTCCTGCCACCATGAGATGAGTGGCTTTGTTCCACCTCTCAAGTGCTaGGATCACAGGTGTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: FIPEPFTVSCHHEMSGFVPPLKC*DHRCPP Trigger: TGGTGGACACCTGTGATCCCAGCACTTGAGAGGTGG...AACAAAGCCACTCATCTCATGGTGGCAGGAGACAGTGAAGGGTTCAGGAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR CCA 90 bp | ACATACAGGTTTGAGACCAGCTTCAATAACAGTGAATTCCAGGCCAGCCTAGGCAACGGAGCAAATCACTaGTGCATTCAGAGCCACGGC | + |
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Preference number: 2 (lower is better) Translates to: TYRFETSFNNSEFQASLGNGANH*CIQSHG Trigger: GCCGTGGCTCTGAATGCACCAGTGATTTGCTCCGTT...GCCTAGGCTGGCCTGGAATTCACTGTTATTGAAGCTGGTCTCAAACCTGTATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR TCA 90 bp | CGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCTAGTCTAAGTGGAATTTaGTGTTGTTCCTGCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: RGCCAYTVCHQHSPAERASLSGI*CCSCSA Trigger: TGCACTGCAGGAACAACATCAAATTCCACTTAGACT...AGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAATTCCGACAGTTTTATTTTAAGGGCTACTGTAGTACACGTGGCTGTTGCGAAGGTACTGAGGCGCTaGGAGCTCAGCCAGCATCAT | + |
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Preference number: 2 (lower is better) Translates to: SNSDSFILRATVVHVAVAKVLRR*ELSQHH Trigger: ATGATGCTGGCTGAGCTCGCAGCGCCTCAGTACCTT...CGCAACAGCCACGTGTACTACAGTAGCCCTTAAAATAAAACTGTCGGAATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCTATGTTGTTCCTGCAGTaGAATGGGAAGAGGCATTAT | + |
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Preference number: 2 (lower is better) Translates to: RGCCAYTVCHQHSPAERAMLFLQ*NGKRHY Trigger: ATAATGCCTCTTCCCATTGCACTGCAGGAACAACAT...AGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAGTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCATGCGCATACACAGTATaGCATCAACACTCTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CSTRGCCAYTVCHQHSPACAYTV*HQHSPA Trigger: TGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCA...TGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CCA 90 bp | TACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAGGAGATGTCAAGCAGATaGTTCCTCAAATACTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: YTWLLRIHSMPSTLSSREEMSSR*FLKYWC Trigger: GCACCAGTATTTGAGGAACCATCTGCTTGACATCTC...CTCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR TCA 90 bp | GTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGAGCTGTATCACTCACTTaGGAAAAGACTGGTTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: VHVAVAHTQYAINTLQQRAVSLT*EKTGLG Trigger: ACCTAAACCAGTCTTTTCTCAAGTGAGTGATACAGC...TCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCTGCAGGCTCTGGTTTGTTGGGAAGAGGCATTATaGATGAAAGGCACACGTAAT | + |
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Preference number: 2 (lower is better) Translates to: TQYAINTLQQRELQALVCWEEAL*MKGTRN Trigger: ATTACGTGTGCCTTTCATTCATAATGCCTCTTCCCA...ACAAACCAGAGCCTGCAGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR TCA 90 bp | GCTATGGTTAAGACCCAGGCAGGTCTTAACCCTTTCCTGCTTTTCTCAGTCAGTAAGAGCCTTCAACTTTaGTCTTCCTGCTTCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: AMVKTQAGLNPFLLFSVSKSLQL*SSCFHL Trigger: GAGGTGGAAGCAGGAAGATCAAAGTTGAAGGCTCTT...ACTGACTGAGAAAAGCAGGAAAGGGTTAAGACCTGCCTGGGTCTTAACCATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCATGGGAAGAGGCATTATaGATGAAAGGCACACGTAAT | + |
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Preference number: 2 (lower is better) Translates to: CSTRGCCAYTVCHQHSPAWEEAL*MKGTRN Trigger: ATTACGTGTGCCTTTCATTCATAATGCCTCTTCCCA...TGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR GCA 90 bp | ACTACCTGTAGTTGTCCTAAAAGGCTCAAGTGTTACAGGCCTGGCTCCCAGCCAAAGCACCCAGAGGTCTaGTTTCATAAAACCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: TTCSCPKRLKCYRPGSQPKHPEV*FHKTKH Trigger: ATGTTTGGTTTTATGAAAGCAGACCTCTGGGTGCTT...TGGCTGGGAGCCAGGCCTGTAACACTTGAGCCTTTTAGGACAACTACAGGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR CCA 90 bp | GTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGATTTGCTCAGTCTAAGTaGAATTTGATGTTGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VHVAVAHTQYAINTLQQRFAQSK*NLMLFL Trigger: CAGGAACAACATCAAATTCCACTTAGACTGAGCAAA...TCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGTTAATTTACAATGCAAGCATTATGCAACTAGACATAGCAACGATTTCAACCTGTCTCCTGAGGGCTaGGGTCAAAGGTGTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GVNLQCKHYATRHSNDFNLSPEG*GQRCVP Trigger: TGGCACACACCTTTGACCCCAGCCCTCAGGAGACAG...GTTGAAATCGTTGCTATGTCTAGTTGCATAATGCTTGCATTGTAAATTAACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAATTCCGACAGTTTTATTTTAAGGGCTACTGTAGTACACGTGGCTGTTGCGGCTGTATCACTCACTTaGGAAAAGACTGGTTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: SNSDSFILRATVVHVAVAAVSLT*EKTGLG Trigger: ACCTAAACCAGTCTTTTCTCAAGTGAGTGATACAGC...CGCAACAGCCACGTGTACTACAGTAGCCCTTAAAATAAAACTGTCGGAATTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAATTCCGACAGTTTTATTTTAAGGGCTACTGTAGTACACGTGGCTGTTGCGAAGAGGCATTATGAATaGAAGGCACACGTAATAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SNSDSFILRATVVHVAVAKRHYE*KAHVIA Trigger: GGCTATTACGTGTGCCTTTCATTCATAATGCCTCTT...CGCAACAGCCACGTGTACTACAGTAGCCCTTAAAATAAAACTGTCGGAATTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAATTCCGACAGTTTTATTTTAAGGGCTACTGTAGTACACGTGGCTGTTGCGTCGAGCAGCTATAATTaGTGGTGCGACTACTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SNSDSFILRATVVHVAVASSSYN*WCDYSF Trigger: AAAAGAGTAGTCGCACCATCAATTATAGCTGCTCGA...CGCAACAGCCACGTGTACTACAGTAGCCCTTAAAATAAAACTGTCGGAATTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127490.8 |
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| 3UTR CAA 90 bp | AAGCATTATGCAACTAGACATAGCAACGATTTCAACCGAGATAATTaGGGTAGAGAAATGAGCCTGGGACTTTGCATGTGGTTAATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KHYATRHSNDFNRDN*GREMSLGLCMWLMA Trigger: GGCCATTAACCACATGCAAAGTCCCAGGCTCATTTCTCTACCCAAATTATCTCGGTTGAAATCGTTGCTATGTCTAGTTGCATAATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR-3UTR TCA 90 bp | CATTTACAGCAATTCCGACAGTTTTATTTTAAGGGCTACTGTAGTACACGTGGCAGTCTAAGTGGAATTTaGTGTTGTTCCTGCAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: HLQQFRQFYFKGYCSTRGSLSGI*CCSCSA Trigger: TGCACTGCAGGAACAACATCAAATTCCACTTAGACT...GCCACGTGTACTACAGTAGCCCTTAAAATAAAACTGTCGGAATTGCTGTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR GCA 72 bp | GTCTCCTGCCACCATGAGATGAGTGGCTTTGTTTTATaGCATGCTCCACGCCATGCTCTATGCCATGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSCHHEMSGFVL*HAPRHALCHDG Trigger: CCCGTCATGGCATAGAGCATGGCGTGGAGCATGGCATAAAACAAAGCCACTCATCTCATGGTGGCAGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR GCA 72 bp | TACTGTAGTACACGTGGCTGTTGCGCATACACAGTATaGCATCAACACTCTCCAGCAGAGAGAGCTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YCSTRGCCAYTV*HQHSPAERAAG Trigger: GCCTGCAGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACAGTA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CAA 90 bp | GTAAACCAAGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAAGAAGAGCCTTCAACTTaGATCTTCCTGCTTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: VNQACLCLLRAGVKGVCQEEPST*IFLLPP Trigger: AGGTGGAAGCAGGAAGATCAAAGTTGAAGGCTCTTC...TTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCTTGGTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
||
| 3UTR TCA 72 bp | CTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAAGCCTaGCTAAAGGGTTTCAGGTATAGGCTTGTTTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRAGVKGVCQQA*LKGFRYRLVLC Trigger: GCACAAAACAAGCCTATACCTGAAACCCTTTAGTCAGGCTTGTTGGCACACACCTTTGACCCCAGCCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR TCA 72 bp | TGTTTTATGCCATGCTCCACGCCATGCTCTATGCCATaGCGGGCTGCCTTACCACAGTCAAAACACAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: CFMPCSTPCSMP*RAALPQSKHNW Trigger: CCAGTTGTGTTTTGACTGTGGTAAGGCAGCCCGTCATGGCATAGAGCATGGCGTGGAGCATGGCATAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| 3UTR TCA 72 bp | TTCCTGAACCCTTCACTGTCTCCTGCCACCATGAGATaGGTGGCTTTGTTTTATGCCATGCTCCACGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: FLNPSLSPATMR*VALFYAMLHAM Trigger: CATGGCGTGGAGCATGGCATAAAACAAAGCCACTCATCTCATGGTGGCAGGAGACAGTGAAGGGTTCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
||
| 3UTR GCA 72 bp | GGCTTTGTTTTATGCCATGCTCCACGCCATGCTCTATaGCATGACGGGCTGCCTTACCACAGTCAAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: GFVLCHAPRHAL*HDGLPYHSQNT Trigger: TGTGTTTTGACTGTGGTAAGGCAGCCCGTCATGGCATAGAGCATGGCGTGGAGCATGGCATAAAACAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCTGCAGGCTCTGGTTTGTCACACTTCTTGTCAGTaGCTGCTAAACCGTCACATG | + |
|
Preference number: 3 (lower is better) Translates to: TQYAINTLQQRELQALVCHTSCQ*LLNRHM Trigger: CATGTGACGGTTTAGCAGCAACTGACAAGAAGTGTG...ACAAACCAGAGCCTGCAGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCAAGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAAAGGTATAGGCTTGTTTaGTGCAGACAGGGTATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NQACLCLLRAGVKGVCQQRYRLV*CRQGIA Trigger: AGCAATACCCTGTCTGCACAAAACAAGCCTATACCT...TTGTTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
||
| 3UTR TCA 72 bp | TTCACTCTTGGCTCTTCTGCCTCAGTTCCTGAGTACTaGGGTTACAGGTGTGGGCCAACATCCAGACCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FTLGSSASVPEY*GYRCGPTSRPK Trigger: TTTAGGTCTGGATGTTGGCCCACACCTGTAACCTCAGTACTCAGGAACTGAGGCAGAAGAGCCAAGAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
||
| 3UTR GCA 72 bp | CACAGTATGCCATCAACACTCTCCAGCAGAGAGAGCTaGAGGCTCTGGTTTGTAGTGTGGTTCTGTGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: HSMPSTLSSRES*RLWFVVWFCVT Trigger: AGTAACACAGAACCACACTACAAACCAGAGCCTGCAGCTCTCTCTGCTGGAGAGTGTTGATGGCATACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
||
| 3UTR GCA 72 bp | CCTTCAACTTTGATCTTCCTGCTTCCACCTCTCAAGTaGTGGGATCACAGGTGTCCACCATCATACCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PSTLIFLLPPLK*WDHRCPPSYLV Trigger: AACCAGGTATGATGGTGGACACCTGTGATCCCAGCACTTGAGAGGTGGAAGCAGGAAGATCAAAGTTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
||
| 3UTR CCA 72 bp | CCATCAACACTCTCCAGCAGAGAGAGCTGCAGGCTCTaGTTTGTAGTGTGGTTCTGTGTTACTAGTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSTLSSRESCRL*FVVWFCVTSDG Trigger: TCCATCACTAGTAACACAGAACCACACTACAAACCAGAGCCTGCAGCTCTCTCTGCTGGAGAGTGTTGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
||
| 3UTR CCA 72 bp | TCAACTTTGATCTTCCTGCTTCCACCTCTCAAGTGCTaGGATCACAGGTGTCCACCATCATACCTGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: STLIFLLPPLKC*DHRCPPSYLVS Trigger: GGAAACCAGGTATGATGGTGGACACCTGTGATCCCAGCACTTGAGAGGTGGAAGCAGGAAGATCAAAGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR-3UTR CAA 90 bp | GTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCAGAGACAGTCTAAGTGGAATTaGATGTTGTTCCTGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VHVAVAHTQYAINTLQQRQSKWN*MLFLQC Trigger: GCACTGCAGGAACAACATCAAATTCCACTTAGACTG...TCTCTGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTAATACCCACATACTTCATCCGCAGAGTTCTGTGCAGGGGCTGAAGTGCTCATCTGGGCCAATATaGCACACTTCTTGTCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSNTHILHPQSSVQGLKCSSGPI*HTSCQL Trigger: CAACTGACAAGAAGTGTGCAATATTGGCCCAGATGA...GCACTTCAGCCCCTGCACAGAACTCTGCGGATGAAGTATGTGGGTATTACTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTACTGTAGTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCAGTCTAAGTGGAATTaGATGTTGTTCCTGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GYCSTRGCCAYTVCHQHSQSKWN*MLFLQC Trigger: GCACTGCAGGAACAACATCAAATTCCACTTAGACTG...AGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACAGTAGCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTCCAGCATGCTGTATCACTCACTaGAGAAAAGACTGGTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CSTRGCCAYTVCHQHSPACCITH*RKDWFR Trigger: CCTAAACCAGTCTTTTCTCAAGTGAGTGATACAGCA...TGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTACTGTAGTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTTGCTGTATCACTCACTaGAGAAAAGACTGGTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GYCSTRGCCAYTVCHQHSCCITH*RKDWFR Trigger: CCTAAACCAGTCTTTTCTCAAGTGAGTGATACAGCA...AGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACAGTAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CAA 90 bp | GGTATTGCTATGGTTAAGACCCAGGCAGGTCTTAACCCTTTCCTGCTTTTCTCAGAAGAGCCTTCAACTTaGATCTTCCTGCTTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GIAMVKTQAGLNPFLLFSEEPST*IFLLPP Trigger: AGGTGGAAGCAGGAAGATCAAAGTTGAAGGCTCTTC...TGAGAAAAGCAGGAAAGGGTTAAGACCTGCCTGGGTCTTAACCATAGCAATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR TCA 72 bp | CCATATTTGTATACTGCTAAGAAGAGCCTTCAACTTTaGTCTTCCTGCTTCCACCTCTCAAGTGCTGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: PYLYTAKKSLQL*SSCFHLSSAGI Trigger: GATCCCAGCACTTGAGAGGTGGAAGCAGGAAGATCAAAGTTGAAGGCTCTTCTTAGCAGTATACAAATATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117775.2 ENSMUST00000121097.8 |
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| 3UTR GCA 72 bp | TTTTATTTTAAGGGCTACTGTAGTACACGTGGCTGTTaGGCATACACAGTATGCCATCAACACTCTCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FYFKGYCSTRGC*AYTVCHQHSPA Trigger: TGCTGGAGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACAGTAGCCCTTAAAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR-3UTR CAA 90 bp | TCTAAGTTTAACTTAGTAATACCCACATACTTCATCCGCAGAGTTCTGTGCAGGCACACTTCTTGTCAGTaGCTGCTAAACCGTCACATG | + |
|
Preference number: 3 (lower is better) Translates to: SKFNLVIPTYFIRRVLCRHTSCQ*LLNRHM Trigger: CATGTGACGGTTTAGCAGCAACTGACAAGAAGTGTG...CCTGCACAGAACTCTGCGGATGAAGTATGTGGGTATTACTAAGTTAAACTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095214.10 ENSMUST00000127490.8 |
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| 3UTR CCA 72 bp | TTACCACAGTCAAAACACAACTGGACCAGTCAATCATaGTCTGAAACCTCTAAAATCCCGAGTCAAGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPQSKHNWTSQS*SETSKIPSQDK Trigger: TTTGTCTTGACTCGGGATTTTAGAGGTTTCAGACCATGATTGACTGGTCCAGTTGTGTTTTGACTGTGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
||
| 3UTR TCA 72 bp | AGCAGTAATACCTGGCTACAGGTCTACTTATTCTACTaGAAACTACTTACATCATCACAGGACATATTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SSNTWLQVYLFY*KLLTSSQDILY Trigger: ATACAATATGTCCTGTGATGATGTAAGTAGTTTTCAGTAGAATAAGTAGACCTGTAGCCAGGTATTACTGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| CDS-3UTR TCA 90 bp | AGCTTGTCTCTGTCTCCTGAGGGCTGGGGTCAAAGGTGTGTGCCAACAAGCCTGTCGAGCAGCTATAATTaGTGGTGCGACTACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSPEGWGQRCVPTSLSSSYN*WCDYSF Trigger: AAAAGAGTAGTCGCACCATCAATTATAGCTGCTCGA...CAGGCTTGTTGGCACACACCTTTGACCCCAGCCCTCAGGAGACAGAGACAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117775.2 |
||
| 3UTR CAA 72 bp | CAAGTCAGGCGTCTGTTATGGTTTAGCCGTGATTCGTaGCTCCCAAAGGCTCAAGTGTTAAAGGGTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVRRLLWFSRDS*LPKAQVLKGWS Trigger: GGACCAACCCTTTAACACTTGAGCCTTTGGGAGCAACGAATCACGGCTAAACCATAACAGACGCCTGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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| CDS-3UTR TCA 90 bp | GGCTACTGTAGTACACGTGGCTGTTGCGCATACACAGTATGCCATCAACACTCTTCGAGCAGCTATAATTaGTGGTGCGACTACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GYCSTRGCCAYTVCHQHSSSSYN*WCDYSF Trigger: AAAAGAGTAGTCGCACCATCAATTATAGCTGCTCGA...AGAGTGTTGATGGCATACTGTGTATGCGCAACAGCCACGTGTACTACAGTAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095214.10 |
||
| CDS-3UTR TCA 90 bp | AAGTTTAACTTAGTAATACCCACATACTTCATCCGCAGAGTTCTGTGCAGGGGCGGTTCCATAATGACGTaGAGAAGGACACTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KFNLVIPTYFIRRVLCRGGSIMT*RRTLLQ Trigger: TTGGAGAAGTGTCCTTCTTCACGTCATTATGGAACC...GCCCCTGCACAGAACTCTGCGGATGAAGTATGTGGGTATTACTAAGTTAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127490.8 |
||
| 3UTR CAA 72 bp | GCAACTAGACATAGCAACGATTTCAACCGAGATAATTaGGGTAGAGAAATGAGCCTGGGACTTTGCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATRHSNDFNRDN*GREMSLGLCMW Trigger: CCACATGCAAAGTCCCAGGCTCATTTCTCTACCCAAATTATCTCGGTTGAAATCGTTGCTATGTCTAGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
||
| 3UTR CAA 72 bp | AATCAGGAAACTAAGGCACAAACGAGACATACAGGTTaGAGACCAGCTTCAATAACAGTGAATTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQETKAQTRHTG*RPASITVNSRP Trigger: TGGCCTGGAATTCACTGTTATTGAAGCTGGTCTCAAACCTGTATGTCTCGTTTGTGCCTTAGTTTCCTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
||
| 3UTR CAA 72 bp | ACCTCTAAAATCCCGAGTCAAGACAAATCTCAGGTATaGAATCCACAGGGATGGAACGTGATTAACATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSKIPSQDKSQV*NPQGWNVINIK Trigger: CTTTATGTTAATCACGTTCCATCCCTGTGGATTCAATACCTGAGATTTGTCTTGACTCGGGATTTTAGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCCAGAGGTCTGCTTTCATAAAACCAAACATGTCAGTATTCCCTCCCCATGTGGTAAAGGATACATaGATGGTGCGACTACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STQRSAFIKPNMSVFPPHVVKDT*MVRLLF Trigger: AAAGAGTAGTCGCACCATCAATGTATCCTTTACCAC...ATGGGGAGGGAATACTGACATGTTTGGTTTTATGAAAGCAGACCTCTGGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121097.8 |
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