Pregenerated sensors for CNDP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024644Ensembl transcript IDs: ENSMUST00000025546.17, ENSMUST00000168419.3, ENSMUST00000236125.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACTGACCACGTCCAACTGCCTGACACAGCTGACAGGTGACAGCTaGAGGCAATGTCTCCATTCTTGCCTGTCTGCCTGTGACCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GLTTSNCLTQLTGDS*RQCLHSCLSACDLR Trigger: TCTCAGGTCACAGGCAGACAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCAGTTGGACGTGGTCAGTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR CCA 90 bp | GGATGCTCTCATTTCCTTCCTGGATATTCCCTGAGCCTCAGTCCATaGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GCSHFLPGYSLSLSP*WAVPPTDLELLDSG Trigger: GCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR TCA 90 bp | CACAAGGAGCTAATGGATGCTCTCATTTCCTTCCTGGATATTCCCTaGGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: HKELMDALISFLDIP*ASVHGGQYLPQTWS Trigger: GCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR GCA 90 bp | GTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATGGATaGTCTCATTTCCTTCCTGGATATTCCCTGAGCCTCAGTCCATGG | + |
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Preference number: 1 (lower is better) Translates to: VTGHHGAVTAQGANG*SHFLPGYSLSLSPW Trigger: CCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR CCA 90 bp | TCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTaGCTACTTCCTGGAGGTGAAGTCACACTGACCACATCTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: SMVGSTSHRLGAFGL*LLPGGEVTLTTSET Trigger: TGTCTCAGATGTGGTCAGTGTGACTTCACCTCCAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR TCA 90 bp | ACAGCTGGAGGCAATGTCTCCATTCTTGCCTGTCTGCCTGTGACCTaGGAAAGAGATAGGGAAAAGAAACTTCCACTTTCCCGAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: TAGGNVSILACLPVT*ERDREKKLPLSRES Trigger: GCTTTCTCGGGAAAGTGGAAGTTTCTTTTCCCTATCTCTTTCTCAGGTCACAGGCAGACAGGCAAGAATGGAGACATTGCCTCCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CCA 90 bp | GATGGGATACAGAGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAAGCCTCAGTCCATGGTaGGCAGTACCTCCCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: DGIQSTVTGHHGAVTAQGSLSPW*AVPPTD Trigger: GTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCT...TCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCTCTGTATCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTGGCTACTTCCTGGAGGTTGCCTGTCTGCCTGTaGCCTGAGAAAGAGATAGGG | + |
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Preference number: 2 (lower is better) Translates to: GQYLPQTWSFWTLATSWRLPVCL*PEKEIG Trigger: CCCTATCTCTTTCTCAGGTCACAGGCAGACAGGCAA...CCTCCAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR CAA 90 bp | TATTCCCTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTaGGAGCTTTTGGACTCTGGCTACTTCCTGGAGGTGAAGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: YSLSLSPWWAVPPTD*ELLDSGYFLEVKSH Trigger: GTGTGACTTCACCTCCAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAGGGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR TCA 90 bp | ACGTCCAACTGCCTGACACAGCTGACAGGTGACAGCTGGAGGCAATGTCTCCATTTGCCTGTCTGCCTGTaGCCTGAGAAAGAGATAGGG | + |
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Preference number: 2 (lower is better) Translates to: TSNCLTQLTGDSWRQCLHLPVCL*PEKEIG Trigger: CCCTATCTCTTTCTCAGGTCACAGGCAGACAGGCAA...ATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCAGTTGGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACCTGACAGGTGACAGCTaGAGGCAATGTCTCCATTCT | + |
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Preference number: 2 (lower is better) Translates to: LSLSPWWAVPPTDLELLDLTGDS*RQCLHS Trigger: AGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAG...GTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGTCACACTGACCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCCTGACAGGTGACAGCTaGAGGCAATGTCTCCATTCT | + |
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Preference number: 2 (lower is better) Translates to: EVTLTTSETPSYPQSWPVLTGDS*RQCLHS Trigger: AGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAG...GACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGGTCAGTGTGACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGGACTCTGGCTACTTCCTGGAGGTGAAGTCACACTGACCACATCTGAGACAGACACAGCTGACAGGTaGCAGCTGGAGGCAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: FGLWLLPGGEVTLTTSETDTADR*QLEAMS Trigger: AGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTC...TGTCTCAGATGTGGTCAGTGTGACTTCACCTCCAGGAAGTAGCCAGAGTCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR GCA 90 bp | CAACTGGACTGGTGCTTCCATGGGGACTGTTGGGATAAGTTCAAGGGGACAGCACAATGTCTCCATTCTTaGCTGTCTGCCTGTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: QLDWCFHGDCWDKFKGTAQCLHS*LSACDL Trigger: CAGGTCACAGGCAGACAGGCAAGAATGGAGACATTG...TGCTGTCCCCTTGAACTTATCCCAACAGTCCCCATGGAAGCACCAGTCCAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CCA 90 bp | CAACTGGACTGGTGCTTCCATGGGGACTGTTGGGATAAGTTCAAGGGGACAGCATACCTCCCACAGACTTaGAGCTTTTGGACTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QLDWCFHGDCWDKFKGTAYLPQT*SFWTLA Trigger: AGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTA...TGCTGTCCCCTTGAACTTATCCCAACAGTCCCCATGGAAGCACCAGTCCAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCATTTCCTTCCTGGATATTCCCTGAGCCTCAGTCCATGGTGGGCAGTAAGGGCAGATTGTTTCTaGGTAGGAACAGCACTCCGA | + |
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Preference number: 2 (lower is better) Translates to: CSHFLPGYSLSLSPWWAVRADCF*VGTALR Trigger: TCGGAGTGCTGTTCCTACCCAGAAACAATCTGCCCT...TACTGCCCACCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CCA 90 bp | ATACAGAGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATCAGACTTGGAGCTTTTaGACTCTGGCTACTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: IQSTVTGHHGAVTAQGANQTWSF*TLATSW Trigger: CCAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTG...ATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCTCTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR TCA 90 bp | ATACAGAGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATTGTCTGCCTGTGACCTaGGAAAGAGATAGGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: IQSTVTGHHGAVTAQGANCLPVT*ERDREK Trigger: CTTTTCCCTATCTCTTTCTCAGGTCACAGGCAGACA...ATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCTCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAGCTAATGGATGCTCTCATTTCCTTCCTGGATATTCCCTGAGCCTCAGTAGGGCAGATTGTTTCTaGGTAGGAACAGCACTCCGA | + |
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Preference number: 2 (lower is better) Translates to: QGANGCSHFLPGYSLSLSRADCF*VGTALR Trigger: TCGGAGTGCTGTTCCTACCCAGAAACAATCTGCCCT...ACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR TCA 90 bp | GTCACAGCACAAGGAGCTAATGGATGCTCTCATTTCCTTCCTGGATATTCCCTGTGTCTGCCTGTGACCTaGGAAAGAGATAGGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VTAQGANGCSHFLPGYSLCLPVT*ERDREK Trigger: CTTTTCCCTATCTCTTTCTCAGGTCACAGGCAGACA...CAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTGCTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CAA 90 bp | CTGACCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCAGTTGTCCCGAGAGAGAGGGCAGATaGTTTCTGGGTAGGAACAGC | + |
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Preference number: 3 (lower is better) Translates to: LTTSETPSYPQSWPVSCPEREGR*FLGRNS Trigger: GCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTC...GGGACAACTGACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR TCA 72 bp | ACTGACCACGTCCAACTGCCTGACACAGCTGACAGGTaGCAGCTGGAGGCAATGTCTCCATTCTTGCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: TDHVQLPDTADR*QLEAMSPFLPV Trigger: GACAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCAGTTGGACGTGGTCAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CAA 90 bp | TGCCTGACACAGCTGACAGGTGACAGCTGGAGGCAATGTCTCCATTCTTGCCTGGAGAGAGAGGGCAGATaGTTTCTGGGTAGGAACAGC | + |
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Preference number: 3 (lower is better) Translates to: CLTQLTGDSWRQCLHSCLEREGR*FLGRNS Trigger: GCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTC...CAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CAA 90 bp | AGATGGGATACAGAGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGATCATGGCCAGTCAGTaGTCCCCAGTAAGTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: RWDTEHSDGSPWCCHSTRIMASQ*SPVSLR Trigger: CCTGAGACTTACTGGGGACAACTGACTGGCCATGAT...CCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCTCTGTATCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCAAGGGGACAGCAACAGGAGGGGACACCAGTGATGGTCAGCTAGGGTCTACAGACTTGGAGCTTTaGGACTCTGGCTACTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: KFKGTATGGDTSDGQLGSTDLEL*DSGYFL Trigger: CAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGT...AGACCCTAGCTGACCATCACTGGTGTCCCCTCCTGTTGCTGTCCCCTTGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR CCA 72 bp | CATTTCCTTCCTGGATATTCCCTGAGCCTCAGTCCATaGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: HFLPGYSLSLSP*WAVPPTDLELL Trigger: CAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR GCA 72 bp | CACCATGGTGCTGTCACAGCACAAGGAGCTAATGGATaGTCTCATTTCCTTCCTGGATATTCCCTGAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: HHGAVTAQGANG*SHFLPGYSLSL Trigger: GAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTGCTGTGACAGCACCATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR-3UTR CAA 90 bp | GTCACAGCACAAGGAGCTAATGGATGCTCTCATTTCCTTCCTGGATATTCCCTGATCATGGCCAGTCAGTaGTCCCCAGTAAGTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VTAQGANGCSHFLPGYSLIMASQ*SPVSLR Trigger: CCTGAGACTTACTGGGGACAACTGACTGGCCATGAT...CAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTGCTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR GCA 72 bp | CTCCAGAGGCTCATTGTCACATTTATTAGTAGTAGCTaGAACTGGACTGGTGCTTCCATGGGGACTGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: LQRLIVTFISSS*NWTGASMGTVG Trigger: CCCAACAGTCCCCATGGAAGCACCAGTCCAGTTGCAGCTACTACTAATAAATGTGACAATGAGCCTCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025546.17 |
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| CDS-3UTR TCA 90 bp | AAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGAACAGCACTCCGAGGCCCGCTCCACCAAGGTaGAGGGCTCGCTGTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: KLEEREGRLFLGRNSTPRPAPPR*RARCPT Trigger: GGTGGGACAGCGAGCCCTTCACCTTGGTGGAGCGGG...CCTCGGAGTGCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR TCA 90 bp | CCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCAGTTGTCCCCAGTCACAGTCTTGGCCCCTaGACCGGAGAAGGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PHLRHPPTPNHGQSVVPSHSLGP*TGEGPF Trigger: GAAGGGGCCTTCTCCGGTTCAGGGGCCAAGACTGTG...ACTGGGGACAACTGACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR TCA 90 bp | TCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGAACAGCACCCGCTCCACCAAGGTaGAGGGCTCGCTGTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: SRESWKRERADCFWVGTAPAPPR*RARCPT Trigger: GGTGGGACAGCGAGCCCTTCACCTTGGTGGAGCGGG...TGCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR GCA 90 bp | GGTGCTTCCATGGGGACTGTTGGGATAAGTTCAAGGGGACAGCAACAGGAGGGGTCTCTTCTCCGGCCATaGGGACACGCTCTGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: GASMGTVGISSRGQQQEGSLLRP*GHALDG Trigger: GCCATCCAGAGCGTGTCCGCATGGCCGGAGAAGAGA...CCCCTCCTGTTGCTGTCCCCTTGAACTTATCCCAACAGTCCCCATGGAAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR GCA 90 bp | CTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACGCCCCTTCGATCCCATaGAGGGAGAGGGACGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LSLSPWWAVPPTDLELLDAPSIP*RERDGY Trigger: ATACCCGTCCCTCTCCCTGCATGGGATCGAAGGGGC...GTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR GCA 90 bp | ATATTCCCTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTCTCTTCTCCGGCCATaGGGACACGCTCTGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: IFPEPQSMVGSTSHRLGASLLRP*GHALDG Trigger: GCCATCCAGAGCGTGTCCGCATGGCCGGAGAAGAGA...AGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAGGGAATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR GCA 90 bp | TGCCTGACACAGCTGACAGGTGACAGCTGGAGGCAATGTCTCCATTCTTGCCTGGCCCCTTCGATCCCATaGAGGGAGAGGGACGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: CLTQLTGDSWRQCLHSCLAPSIP*RERDGY Trigger: ATACCCGTCCCTCTCCCTGCATGGGATCGAAGGGGC...CAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CCA 90 bp | CTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTGGGGATCACAGTCTTaGCCCCTGAACCGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LSLSPWWAVPPTDLELLDWGSQS*PLNRRR Trigger: CCTTCTCCGGTTCAGGGGCCAAGACTGTGATCCCCA...GTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR TCA 90 bp | ACGTCCAACTGCCTGACACAGCTGACAGGTGACAGCTGGAGGCAATGTCTCCATCATGGCCTCGTGCACTaGGCCTCCATATACCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TSNCLTQLTGDSWRQCLHHGLVH*ASIYPR Trigger: TCTGGGGTATATGGAGGCTCAGTGCACGAGGCCATG...ATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCAGTTGGACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR TCA 90 bp | CCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTGGCTACTTCTGTCTGGCACGAGCCTaGTGGAGAACTTGCCGACCA | + |
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Preference number: 4 (lower is better) Translates to: PWWAVPPTDLELLDSGYFCLARA*WRTCRP Trigger: TGGTCGGCAAGTTCTCCATCAGGCTCGTGCCAGACA...GAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CCA 90 bp | GGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTGGCTACTTCCTGGAGGCGGACACGCTCTGGATaGCCACCCATTCTGCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: GQYLPQTWSFWTLATSWRRTRSG*PPILQV Trigger: AACTTGCAGAATGGGTGGCCATCCAGAGCGTGTCCG...CCTCCAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CCA 90 bp | CTGACCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCAGTTGTCCCGCTTGCCCAGCAGAATaGGAGGAAGTGGTATCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LTTSETPSYPQSWPVSCPACPAE*EEVVSP Trigger: CGGAGATACCACTTCCTCCCATTCTGCTGGGCAAGC...GGGACAACTGACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CCA 90 bp | TGCCTGACACAGCTGACAGGTGACAGCTGGAGGCAATGTCTCCATTCTTGCCTGGCCCCTTATCGTCCGTaGAGCCTCTCCCATACAGCT | + |
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Preference number: 4 (lower is better) Translates to: CLTQLTGDSWRQCLHSCLAPYRP*SLSHTA Trigger: AGCTGTATGGGAGAGGCTCCACGGACGATAAGGGGC...CAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CCA 90 bp | ATATTCCCTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTGGGGATCACAGTCTTaGCCCCTGAACCGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: IFPEPQSMVGSTSHRLGAWGSQS*PLNRRR Trigger: CCTTCTCCGGTTCAGGGGCCAAGACTGTGATCCCCA...AGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAGGGAATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| 3UTR CAA 72 bp | AGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTaGGAGCTTTTGGACTCTGGCTACTTCCTGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLSPWWAVPPTD*ELLDSGYFLEV Trigger: CACCTCCAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR TCA 90 bp | CCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCAGTTGTCCCCAGTAGCCCATCAGTGAAATaGGATCCGTCATGGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLRHPPTPNHGQSVVPSSPSVK*DPSWPR Trigger: ACGAGGCCATGACGGATCTCATTTCACTGATGGGCT...ACTGGGGACAACTGACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | ATATTCCCTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTCAGGCAGCCCATCAGTaGAATGAGATCCGTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFPEPQSMVGSTSHRLGAQAAHQ*NEIRHG Trigger: GCCATGACGGATCTCATTTCACTGATGGGCTGCCTG...AGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAGGGAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | AGATGGGATACAGAGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGGGCCCATGTACACCTTaGACTTGTTGGGGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWDTEHSDGSPWCCHSTRGPCTP*TCWGSA Trigger: TGCAGAGCCCCAACAAGTTCAAGGTGTACATGGGCC...CCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCTCTGTATCCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | CCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTGGCTACTTCGGCCCATGTACACCTTaGACTTGTTGGGGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PWWAVPPTDLELLDSGYFGPCTP*TCWGSA Trigger: TGCAGAGCCCCAACAAGTTCAAGGTGTACATGGGCC...GAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | CCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCAGTTGTCCCCAGTGGTAATGAGGATGGTTaGAGTCAGACACCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHLRHPPTPNHGQSVVPSGNEDG*SQTPRA Trigger: AGCCCTGGGTGTCTGACTTCAACCATCCTCATTACC...ACTGGGGACAACTGACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | ACGTCCAACTGCCTGACACAGCTGACAGGTGACAGCTGGAGGCAATGTCTCCATCTGGACATCGGCAGCTaGCACCTCCATCATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSNCLTQLTGDSWRQCLHLDIGS*HLHHPS Trigger: AGAAGGATGATGGAGGTGGCAGCTGCCGATGTCCAG...ATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCAGTTGGACGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGACAGCTGGAGGCAATGTCTCCATTCTTGCCTGTCTGCCTGTGACCTGCGGACACGCTCTGGATaGCCACCCATTCTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGDSWRQCLHSCLSACDLRTRSG*PPILQV Trigger: AACTTGCAGAATGGGTGGCCATCCAGAGCGTGTCCG...CAGGTCACAGGCAGACAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | CCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGACAGGGCTTCCCGCCGTaGCCCATGTACACCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSRESWKRERADCFWVGQGFPP*PMYTLN Trigger: GTTCAAGGTGTACATGGGCCACGGCGGGAAGCCCTG...TCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | GAAGTCACACTGACCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCCTTTCTGGGCAAAAATaGGCTCATCCAGGCCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EVTLTTSETPSYPQSWPVLSGQK*AHPGLR Trigger: CCGAAGGCCTGGATGAGCTCATTTTTGCCCAGAAAG...GACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGGTCAGTGTGACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTGGCTACTTCCTGAGCCCATCAGTGAAATaGGATCCGTCATGGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WWAVPPTDLELLDSGYFLSPSVK*DPSWPR Trigger: ACGAGGCCATGACGGATCTCATTTCACTGATGGGCT...CAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | CCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGATGTCTGGCACGAGCCTaGTGGAGAACTTGCCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSRESWKRERADCFWVGCLARA*WRTCRP Trigger: TGGTCGGCAAGTTCTCCATCAGGCTCGTGCCAGACA...TCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTGGCTACTTCCTGGAGGGTAATGAGGATGGTTaGAGTCAGACACCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAVPPTDLELLDSGYFLEGNEDG*SQTPRA Trigger: AGCCCTGGGTGTCTGACTTCAACCATCCTCATTACC...CTCCAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | GAAGTCACACTGACCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCTTGCCTGTGGCCTCTTaGAAGGTCAAGGTCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVTLTTSETPSYPQSWPVLPVAS*KVKVTG Trigger: TCCTGTGACCTTGACCTTTCAAGAGGCCACAGGCAA...GACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGGTCAGTGTGACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | CTGACCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCAGTTGTCCCCCACTGGCAATAGCATaGCATTTTTGCCTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTTSETPSYPQSWPVSCPPLAIA*HFCLWP Trigger: AGGCCACAGGCAAAAATGTCATGCTATTGCCAGTGG...GGGACAACTGACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | CAACTGGACTGGTGCTTCCATGGGGACTGTTGGGATAAGTTCAAGGGGACAGCACTGGACATCGGCAGCTaGCACCTCCATCATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLDWCFHGDCWDKFKGTALDIGS*HLHHPS Trigger: AGAAGGATGATGGAGGTGGCAGCTGCCGATGTCCAG...TGCTGTCCCCTTGAACTTATCCCAACAGTCCCCATGGAAGCACCAGTCCAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCTCATTTCCTTCCTGGATATTCCCTGAGCCTCAGTCCATGGTGGGCAGTAGGTCGCTGCCTAGCTTaGCCAGCAGAATGGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSHFLPGYSLSLSPWWAVGRCLA*PAEWEE Trigger: TTCCTCCCATTCTGCTGGGCAAGCTAGGCAGCGACC...TACTGCCCACCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | CCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGAGCCCCTTATCGTCCGTaGAGCCTCTCCCATACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSRESWKRERADCFWVGAPYRP*SLSHTA Trigger: AGCTGTATGGGAGAGGCTCCACGGACGATAAGGGGC...TCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGACTCTGGCTACTTCCTGGAGGTGAAGTCACACTGACCACATCTGAGACACAGGGCTTCCCGCCGTaGCCCATGTACACCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FGLWLLPGGEVTLTTSETQGFPP*PMYTLN Trigger: GTTCAAGGTGTACATGGGCCACGGCGGGAAGCCCTG...TGTCTCAGATGTGGTCAGTGTGACTTCACCTCCAGGAAGTAGCCAGAGTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | AACTTCCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGCATGGCCTCGTGCACTaGGCCTCCATATACCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NFHFPEKAGRERGQIVSGHGLVH*ASIYPR Trigger: TCTGGGGTATATGGAGGCTCAGTGCACGAGGCCATG...CCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | ATACAGAGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATCAGGCAGCCCATCAGTaGAATGAGATCCGTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQSTVTGHHGAVTAQGANQAAHQ*NEIRHG Trigger: GCCATGACGGATCTCATTTCACTGATGGGCTGCCTG...ATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCTCTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCATTTCCTTCCTGGATATTCCCTGAGCCTCAGTCCATGGTGGGCAGTACCCAGAATGGGAGGAAGTaGTATCTCCGAGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFPSWIFPEPQSMVGSTQNGRK*YLRAIW Trigger: CCAGATGGCTCGGAGATACCACTTCCTCCCATTCTG...GGTACTGCCCACCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATGGATGCTTCCGGTATCATGTCTaGCACGAGCCTGATGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: STVTGHHGAVTAQGANGCFRYHV*HEPDGE Trigger: TTCTCCATCAGGCTCGTGCCAGACATGATACCGGAA...GCATCCATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | TGCCTGACACAGCTGACAGGTGACAGCTGGAGGCAATGTCTCCATTCTTGCCTGTACTGCCACCTTCTCTaGTCAAGTCAGGCTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: CLTQLTGDSWRQCLHSCLYCHLL*SSQAQH Trigger: GTGTTGAGCCTGACTTGACCAGAGAAGGTGGCAGTA...CAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCATTTCCTTCCTGGATATTCCCTGAGCCTCAGTCCATGGTGGGCAGTACTTTCTGGGCAAAAATaGGCTCATCCAGGCCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSHFLPGYSLSLSPWWAVLSGQK*AHPGLR Trigger: CCGAAGGCCTGGATGAGCTCATTTTTGCCCAGAAAG...TACTGCCCACCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | AGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATGGATGCAGGTCACAGGAATACTaGCACCTTCTCTGGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: STVTGHHGAVTAQGANGCRSQEY*HLLWSS Trigger: ACTTGACCAGAGAAGGTGGCAGTATTCCTGTGACCT...GCATCCATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGAACAGCACTCCGAGGTTCCGGTATCATGTCTaGCACGAGCCTGATGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLEEREGRLFLGRNSTPRFRYHV*HEPDGE Trigger: TTCTCCATCAGGCTCGTGCCAGACATGATACCGGAA...CCTCGGAGTGCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACCATAGTCCACATCTTTaGAGAACTTGTCTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSPWWAVPPTDLELLDHSPHL*RTCLSG Trigger: CCCAGAAAGACAAGTTCTTCAAAGATGTGGACTATG...GTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACTCTGGCTACTTCCTGGAGCAGCCAGTAATTGTCTaGAATGCACACATAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WAVPPTDLELLDSGYFLEQPVIV*NAHIVH Trigger: GTGGACTATGTGTGCATTTCAGACAATTACTGGCTG...CTCCAGGAAGTAGCCAGAGTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | AGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATGGATGCCAGCCAGTAATTGTCTaGAATGCACACATAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: STVTGHHGAVTAQGANGCQPVIV*NAHIVH Trigger: GTGGACTATGTGTGCATTTCAGACAATTACTGGCTG...GCATCCATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | AACTTCCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGCCAGGTGCCCGTAAATaGACACGGTTTTCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NFHFPEKAGRERGQIVSGPGARK*TRFSSG Trigger: CCCAGAAGAAAACCGTGTGCATTTACGGGCACCTGG...CCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGAACAGCACTCCGAGGTCAGGATGTCTTTCTTaGAGCTGTGCAGAAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLEEREGRLFLGRNSTPRSGCLS*SCAEGS Trigger: AGACCCTTCTGCACAGCTGCAAGAAAGACATCCTGA...CCTCGGAGTGCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | GGAAAAGAAACTTCCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGGCTTGCCCAGCAGAATaGGAGGAAGTGGTATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKETSTFPRKLEEREGRLACPAE*EEVVSP Trigger: CGGAGATACCACTTCCTCCCATTCTGCTGGGCAAGC...CAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGGAAGTTTCTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| 3UTR CAA 72 bp | ACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATaGTTTCTGGGTAGGAACAGCACTCCGAGGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TFPRKLEEREGR*FLGRNSTPRKL Trigger: CAGTTTCCTCGGAGTGCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | GTCACAGCACAAGGAGCTAATGGATGCTCTCATTTCCTTCCTGGATATTCCCTGTTGCCTGTGGCCTCTTaGAAGGTCAAGGTCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTAQGANGCSHFLPGYSLLPVAS*KVKVTG Trigger: TCCTGTGACCTTGACCTTTCAAGAGGCCACAGGCAA...CAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTGCTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | AACTTCCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGCCATCTGGGAGCTTCTaGTTCCCAATATCCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFHFPEKAGRERGQIVSGPSGSF*FPISTS Trigger: ACTGGTGGATATTGGGAAGCAGAAGCTCCCAGATGG...CCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGGAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAAGAAACTTCCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGCCAGGTGCCCGTAAATaGACACGGTTTTCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKETSTFPRKLEEREGRLPGARK*TRFSSG Trigger: CCCAGAAGAAAACCGTGTGCATTTACGGGCACCTGG...CAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGGAAGTTTCTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | TCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGAACAGCATCAGGATGTCTTTCTTaGAGCTGTGCAGAAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRESWKRERADCFWVGTASGCLS*SCAEGS Trigger: AGACCCTTCTGCACAGCTGCAAGAAAGACATCCTGA...TGCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR TCA 90 bp | GTCACAGCACAAGGAGCTAATGGATGCTCTCATTTCCTTCCTGGATATTCCCTGCCACTGGCAATAGCATaGCATTTTTGCCTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTAQGANGCSHFLPGYSLPLAIA*HFCLWP Trigger: AGGCCACAGGCAAAAATGTCATGCTATTGCCAGTGG...CAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTGCTGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | AACTTCCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGAGGTCACAGGAATACTaGCACCTTCTCTGGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFHFPEKAGRERGQIVSGRSQEY*HLLWSS Trigger: ACTTGACCAGAGAAGGTGGCAGTATTCCTGTGACCT...CCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGACAGCTGGAGGCAATGTCTCCATTCTTGCCTGTCTGCCTGTGACCTGAAGAACTTGTCTTTCTaGGCAAAAATGAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TGDSWRQCLHSCLSACDLKNLSF*AKMSSS Trigger: GGATGAGCTCATTTTTGCCCAGAAAGACAAGTTCTT...CAGGTCACAGGCAGACAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATGGATGCAAGAACTTGTCTTTCTaGGCAAAAATGAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: STVTGHHGAVTAQGANGCKNLSF*AKMSSS Trigger: GGATGAGCTCATTTTTGCCCAGAAAGACAAGTTCTT...GCATCCATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | GGAAAAGAAACTTCCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTACTGCCACCTTCTCTaGTCAAGTCAGGCTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GKETSTFPRKLEEREGRLYCHLL*SSQAQH Trigger: GTGTTGAGCCTGACTTGACCAGAGAAGGTGGCAGTA...CAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGGAAGTTTCTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR GCA 90 bp | CCACATCTGAGACACCCTCCTACCCCCAATCATGGCCAGTCAGTTGTCCCCAGTAGTAATTGTCTGAAATaGACACATAGTCCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHLRHPPTPNHGQSVVPSSNCLK*THSPHL Trigger: AAGATGTGGACTATGTGTGCATTTCAGACAATTACT...ACTGGGGACAACTGACTGGCCATGATTGGGGGTAGGAGGGTGTCTCAGATGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
||
| CDS-3UTR CCA 90 bp | CAACTGGACTGGTGCTTCCATGGGGACTGTTGGGATAAGTTCAAGGGGACAGCATTTTCATCGATATACTaGAAGACAGCTTTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLDWCFHGDCWDKFKGTAFSSIY*KTALRA Trigger: AGCCCTCAAAGCTGTCTTCCAGTATATCGATGAAAA...TGCTGTCCCCTTGAACTTATCCCAACAGTCCCCATGGAAGCACCAGTCCAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CCA 90 bp | TCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGAACAGCATTTTCATCGATATACTaGAAGACAGCTTTGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SRESWKRERADCFWVGTAFSSIY*KTALRA Trigger: AGCCCTCAAAGCTGTCTTCCAGTATATCGATGAAAA...TGCTGTTCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR GCA 90 bp | GTCACAGCACAAGGAGCTAATGGATGCTCTCATTTCCTTCCTGGATATTCCCTGAGTAATTGTCTGAAATaGACACATAGTCCACATCTT | + |
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Preference number: 4 (lower is better) Translates to: VTAQGANGCSHFLPGYSLSNCLK*THSPHL Trigger: AAGATGTGGACTATGTGTGCATTTCAGACAATTACT...CAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTGCTGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS GCA 90 bp | CGTCCAGGTGCCCGTAAATGCACACGGTTTTCTTCTGGGGGTCGCTaGCTAGCTTGCCCAGCAGAATGGGAGGAAGTGGTATCTCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: RPGARKCTRFSSGGR*LACPAEWEEVVSPS Trigger: GCTCGGAGATACCACTTCCTCCCATTCTGCTGGGCAAGCTAGGCAGCGACCCCCAGAAGAAAACCGTGTGCATTTACGGGCACCTGGACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 ENSMUST00000236125.2 |
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| CDS GCA 90 bp | GCCCCTTCGATCCCATGCAGGGAGAGGGACGGGTATCGCCATCTGTaGATCAGGATGTCTTTCTTGCAGCTGTGCAGAAGGGTCTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: APSIPCRERDGYRHL*IRMSFLQLCRRVSA Trigger: GGCTGAGACCCTTCTGCACAGCTGCAAGAAAGACATCCTGATGCACAGATGGCGATACCCGTCCCTCTCCCTGCATGGGATCGAAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS CCA 90 bp | ACCAGTCTTCTGATAGGCTTCCAGGGCATTCATCCACCCGGCCACTaGCCCCTTATCGTCCGTGGAGCCTCTCCCATACAGCTTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TSLLIGFQGIHPPGH*PLIVRGASPIQLAF Trigger: GAAGGCAAGCTGTATGGGAGAGGCTCCACGGACGATAAGGGGCCAGTGGCCGGGTGGATGAATGCCCTGGAAGCCTATCAGAAGACTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS GCA 90 bp | GCCCGTAAATGCACACGGTTTTCTTCTGGGGGTCGCTGCCTAGCTTaGCCAGCAGAATGGGAGGAAGTGGTATCTCCGAGCCATCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: ARKCTRFSSGGRCLA*PAEWEEVVSPSHLG Trigger: TCCCAGATGGCTCGGAGATACCACTTCCTCCCATTCTGCTGGGCAAGCTAGGCAGCGACCCCCAGAAGAAAACCGTGTGCATTTACGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 ENSMUST00000236125.2 |
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| CDS CCA 90 bp | ACACGGTTTTCTTCTGGGGGTCGCTGCCTAGCTTGCCCAGCAGAATaGGAGGAAGTGGTATCTCCGAGCCATCTGGGAGCTTCTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: TRFSSGGRCLACPAE*EEVVSPSHLGASAS Trigger: GGAAGCAGAAGCTCCCAGATGGCTCGGAGATACCACTTCCTCCCATTCTGCTGGGCAAGCTAGGCAGCGACCCCCAGAAGAAAACCGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 ENSMUST00000236125.2 |
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| CDS-3UTR CAA 90 bp | CTGAGCCTCAGTCCATGGTGGGCAGTACCTCCCACAGACTTGGAGCTTTTGGACAGGATCTTCCCCTTCTaGTCTACCAGGCAGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: LSLSPWWAVPPTDLELLDRIFPF*STRQPI Trigger: GATGGGCTGCCTGGTAGACAAGAAGGGGAAGATCCT...GTCCAAAAGCTCCAAGTCTGTGGGAGGTACTGCCCACCATGGACTGAGGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CAA 90 bp | AGCACAGTGACGGGTCACCATGGTGCTGTCACAGCACAAGGAGCTAATGGATGCAGGATCTTCCCCTTCTaGTCTACCAGGCAGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: STVTGHHGAVTAQGANGCRIFPF*STRQPI Trigger: GATGGGCTGCCTGGTAGACAAGAAGGGGAAGATCCT...GCATCCATTAGCTCCTTGTGCTGTGACAGCACCATGGTGACCCGTCACTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CAA 90 bp | CCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGAAGCCTGATGGAGAACTaGCCGACCACCTTTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: PLSRESWKRERADCFWVGSLMEN*PTTFLG Trigger: CCCCAGAAAGGTGGTCGGCAAGTTCTCCATCAGGCT...TCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CAA 90 bp | TGCTCTCATTTCCTTCCTGGATATTCCCTGAGCCTCAGTCCATGGTGGGCAGTAAGCCTGATGGAGAACTaGCCGACCACCTTTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: CSHFLPGYSLSLSPWWAVSLMEN*PTTFLG Trigger: CCCCAGAAAGGTGGTCGGCAAGTTCTCCATCAGGCT...TACTGCCCACCATGGACTGAGGCTCAGGGAATATCCAGGAAGGAAATGAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS TCA 90 bp | TCTGCGAGTGGGCACCGTCATCTGCTGACCCCACTGGCAATAGCATaGCATTTTTGCCTGTGGCCTCTTGAAAGGTCAAGGTCACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SASGHRHLLTPLAIA*HFCLWPLERSRSQE Trigger: TTCCTGTGACCTTGACCTTTCAAGAGGCCACAGGCAAAAATGTCATGCTATTGCCAGTGGGGTCAGCAGATGACGGTGCCCACTCGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS GCA 90 bp | TCTCTTCTCCGGCCATGCGGACACGCTCTGGATGGCCACCCATTCTaGAAGTTTCTTGACGTAGCGGTCCTGGTTTTCATCGATATACTG | + |
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Preference number: 5 (lower is better) Translates to: SLLRPCGHALDGHPF*KFLDVAVLVFIDIL Trigger: CAGTATATCGATGAAAACCAGGACCGCTACGTCAAGAAACTTGCAGAATGGGTGGCCATCCAGAGCGTGTCCGCATGGCCGGAGAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 ENSMUST00000236125.2 |
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| CDS GCA 90 bp | TCTACCAGGCAGCCCATCAGTGAAATGAGATCCGTCATGGCCTCGTaGACTGAGCCTCCATATACCCCAGAATGGAGGTCTTTGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: STRQPISEMRSVMAS*TEPPYTPEWRSLSL Trigger: CAGTGACAAAGACCTCCATTCTGGGGTATATGGAGGCTCAGTGCACGAGGCCATGACGGATCTCATTTCACTGATGGGCTGCCTGGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CAA 90 bp | TGCCTGACACAGCTGACAGGTGACAGCTGGAGGCAATGTCTCCATTCTTGCCTGTACACCTTGAACTTGTaGGGGCTCTGCAGTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CLTQLTGDSWRQCLHSCLYTLNL*GLCSSA Trigger: TGCTGAACTGCAGAGCCCCAACAAGTTCAAGGTGTA...CAGGCAAGAATGGAGACATTGCCTCCAGCTGTCACCTGTCAGCTGTGTCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CAA 90 bp | CCACTTTCCCGAGAAAGCTGGAAGAGAGAGAGGGCAGATTGTTTCTGGGTAGGATGGCCCATGTACACCTaGAACTTGTTGGGGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: PLSRESWKRERADCFWVGWPMYT*NLLGLC Trigger: GCAGAGCCCCAACAAGTTCAAGGTGTACATGGGCCA...TCCTACCCAGAAACAATCTGCCCTCTCTCTCTTCCAGCTTTCTCGGGAAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS TCA 90 bp | GCTGACCCCACTGGCAATAGCATGACATTTTTGCCTGTGGCCTCTTaGAAGGTCAAGGTCACAGGAATACTGCCACCTTCTCTGGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: ADPTGNSMTFLPVAS*KVKVTGILPPSLVK Trigger: CTTGACCAGAGAAGGTGGCAGTATTCCTGTGACCTTGACCTTTCAAGAGGCCACAGGCAAAAATGTCATGCTATTGCCAGTGGGGTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS-3UTR CAA 90 bp | GTCACAGCACAAGGAGCTAATGGATGCTCTCATTTCCTTCCTGGATATTCCCTGTGGCCCATGTACACCTaGAACTTGTTGGGGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VTAQGANGCSHFLPGYSLWPMYT*NLLGLC Trigger: GCAGAGCCCCAACAAGTTCAAGGTGTACATGGGCCA...CAGGGAATATCCAGGAAGGAAATGAGAGCATCCATTAGCTCCTTGTGCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS GCA 72 bp | TTGGCCCCTGAACCGGAGAAGGCCCCTTCGATCCCATaGAGGGAGAGGGACGGGTATCGCCATCTGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: LAPEPEKAPSIP*RERDGYRHLCI Trigger: GATGCACAGATGGCGATACCCGTCCCTCTCCCTGCATGGGATCGAAGGGGCCTTCTCCGGTTCAGGGGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS CCA 72 bp | CTGATAGGCTTCCAGGGCATTCATCCACCCGGCCACTaGCCCCTTATCGTCCGTGGAGCCTCTCCCATACAG | + |
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Preference number: 6 (lower is better) Translates to: LIGFQGIHPPGH*PLIVRGASPIQ Trigger: CTGTATGGGAGAGGCTCCACGGACGATAAGGGGCCAGTGGCCGGGTGGATGAATGCCCTGGAAGCCTATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS CCA 72 bp | TCTTCTGGGGGTCGCTGCCTAGCTTGCCCAGCAGAATaGGAGGAAGTGGTATCTCCGAGCCATCTGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSGGRCLACPAE*EEVVSPSHLGA Trigger: AGCTCCCAGATGGCTCGGAGATACCACTTCCTCCCATTCTGCTGGGCAAGCTAGGCAGCGACCCCCAGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 ENSMUST00000236125.2 |
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| CDS CCA 72 bp | GGATGGTTGAAGTCAGACACCCAGGGCTTCCCGCCGTaGCCCATGTACACCTTGAACTTGTTGGGGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GWLKSDTQGFPP*PMYTLNLLGLC Trigger: GCAGAGCCCCAACAAGTTCAAGGTGTACATGGGCCACGGCGGGAAGCCCTGGGTGTCTGACTTCAACCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS CAA 90 bp | GGCGCCACGGCATCGTTGATGCCCGGGATGAGGATCTTCCCCTTCTaGTCTACCAGGCAGCCCATCAGTGAAATGAGATCCGTCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: GATASLMPGMRIFPF*STRQPISEMRSVMA Trigger: GGCCATGACGGATCTCATTTCACTGATGGGCTGCCTGGTAGACAAGAAGGGGAAGATCCTCATCCCGGGCATCAACGATGCCGTGGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS GCA 72 bp | TGCACACGGTTTTCTTCTGGGGGTCGCTGCCTAGCTTaGCCAGCAGAATGGGAGGAAGTGGTATCTCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: CTRFSSGGRCLA*PAEWEEVVSPS Trigger: GCTCGGAGATACCACTTCCTCCCATTCTGCTGGGCAAGCTAGGCAGCGACCCCCAGAAGAAAACCGTGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 ENSMUST00000236125.2 |
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| CDS GCA 72 bp | GCCCGTAAATGCACACGGTTTTCTTCTGGGGGTCGCTaGCTAGCTTGCCCAGCAGAATGGGAGGAAGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: ARKCTRFSSGGR*LACPAEWEEVV Trigger: TACCACTTCCTCCCATTCTGCTGGGCAAGCTAGGCAGCGACCCCCAGAAGAAAACCGTGTGCATTTACGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 ENSMUST00000236125.2 |
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| CDS CCA 72 bp | CTCCTCCATGCCTTCCAGGCAGAACCGCAGGTTGACTaGGATCTCCTGACCAGTCTTCTGATAGGCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLHAFQAEPQVD*DLLTSLLIGFQ Trigger: CTGGAAGCCTATCAGAAGACTGGTCAGGAGATCCCAGTCAACCTGCGGTTCTGCCTGGAAGGCATGGAGGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS CAA 72 bp | ATGCACACGGTTTTCTTCTGGGGGTCGCTGCCTAGCTaGCCCAGCAGAATGGGAGGAAGTGGTATCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: MHTVFFWGSLPS*PSRMGGSGISE Trigger: CTCGGAGATACCACTTCCTCCCATTCTGCTGGGCAAGCTAGGCAGCGACCCCCAGAAGAAAACCGTGTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 ENSMUST00000236125.2 |
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| CDS CAA 72 bp | TCCGGTATCATGTCTGGCACGAGCCTGATGGAGAACTaGCCGACCACCTTTCTGGGGATCACAGTCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SGIMSGTSLMEN*PTTFLGITVLA Trigger: GGCCAAGACTGTGATCCCCAGAAAGGTGGTCGGCAAGTTCTCCATCAGGCTCGTGCCAGACATGATACCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS CAA 90 bp | CTAACAACTTCCGGTATCATGTCTGGCACGAGCCTGATGGAGAACTaGCCGACCACCTTTCTGGGGATCACAGTCTTGGCCCCTGAACCG | + |
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Preference number: 6 (lower is better) Translates to: LTTSGIMSGTSLMEN*PTTFLGITVLAPEP Trigger: CGGTTCAGGGGCCAAGACTGTGATCCCCAGAAAGGTGGTCGGCAAGTTCTCCATCAGGCTCGTGCCAGACATGATACCGGAAGTTGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS TCA 72 bp | CAGACTCCTCCATGCCTTCCAGGCAGAACCGCAGGTTaGCTGGGATCTCCTGACCAGTCTTCTGATAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: QTPPCLPGRTAG*LGSPDQSSDRL Trigger: AAGCCTATCAGAAGACTGGTCAGGAGATCCCAGTCAACCTGCGGTTCTGCCTGGAAGGCATGGAGGAGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS TCA 72 bp | TCCCCTTCTTGTCTACCAGGCAGCCCATCAGTGAAATaGGATCCGTCATGGCCTCGTGCACTGAGCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SPSCLPGSPSVK*DPSWPRALSLH Trigger: ATGGAGGCTCAGTGCACGAGGCCATGACGGATCTCATTTCACTGATGGGCTGCCTGGTAGACAAGAAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS GCA 72 bp | ATCCCATGCAGGGAGAGGGACGGGTATCGCCATCTGTaGATCAGGATGTCTTTCTTGCAGCTGTGCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: IPCRERDGYRHL*IRMSFLQLCRR Trigger: CCTTCTGCACAGCTGCAAGAAAGACATCCTGATGCACAGATGGCGATACCCGTCCCTCTCCCTGCATGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS CAA 72 bp | GACACCCAGGGCTTCCCGCCGTGGCCCATGTACACCTaGAACTTGTTGGGGCTCTGCAGTTCAGCAAATTTT | + |
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Preference number: 6 (lower is better) Translates to: DTQGFPPWPMYT*NLLGLCSSANF Trigger: AAAATTTGCTGAACTGCAGAGCCCCAACAAGTTCAAGGTGTACATGGGCCACGGCGGGAAGCCCTGGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS TCA 72 bp | ACACCCAGGGCTTCCCGCCGTGGCCCATGTACACCTTaGACTTGTTGGGGCTCTGCAGTTCAGCAAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: TPRASRRGPCTP*TCWGSAVQQIF Trigger: AAAAATTTGCTGAACTGCAGAGCCCCAACAAGTTCAAGGTGTACATGGGCCACGGCGGGAAGCCCTGGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS TCA 72 bp | GGGCACCGTCATCTGCTGACCCCACTGGCAATAGCATaGCATTTTTGCCTGTGGCCTCTTGAAAGGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GHRHLLTPLAIA*HFCLWPLERSR Trigger: CCTTGACCTTTCAAGAGGCCACAGGCAAAAATGTCATGCTATTGCCAGTGGGGTCAGCAGATGACGGTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS GCA 72 bp | CAGCCCATCAGTGAAATGAGATCCGTCATGGCCTCGTaGACTGAGCCTCCATATACCCCAGAATGGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: QPISEMRSVMAS*TEPPYTPEWRS Trigger: AGACCTCCATTCTGGGGTATATGGAGGCTCAGTGCACGAGGCCATGACGGATCTCATTTCACTGATGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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| CDS CAA 72 bp | GCATCGTTGATGCCCGGGATGAGGATCTTCCCCTTCTaGTCTACCAGGCAGCCCATCAGTGAAATGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: ASLMPGMRIFPF*STRQPISEMRS Trigger: GGATCTCATTTCACTGATGGGCTGCCTGGTAGACAAGAAGGGGAAGATCCTCATCCCGGGCATCAACGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025546.17 ENSMUST00000168419.3 |
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