Pregenerated sensors for CNDP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056162Ensembl transcript IDs: ENSMUST00000070139.9, ENSMUST00000236714.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGGGTCCTGAGACCCTGGGTCCGATGATTGGGAACCACAGTTCTTaGGACTGGAAAGTGAACTGGAGTGTTAAGCCAATGGAATTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SGPETLGPMIGNHSS*DWKVNWSVKPMELK Trigger: TTTCAATTCCATTGGCTTAACACTCCAGTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAATCATCGGACCCAGGGTCTCAGGACCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR CCA 90 bp | CCTGAGACCCTGGGTCCGATGATTGGGAACCACAGTTCTTGGGACTaGAAAGTGAACTGGAGTGTTAAGCCAATGGAATTGAAAGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: PETLGPMIGNHSSWD*KVNWSVKPMELKVR Trigger: TCTCACTTTCAATTCCATTGGCTTAACACTCCAGTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAATCATCGGACCCAGGGTCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR CCA 90 bp | GTTGCAGTAGATTCAGGAACTAACGGTCTCGGTAGCTGTGACTTGTaGAAGTTAAGTGACGGAGGGACTGTTAAAACATCTCCAATATCT | + |
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Preference number: 1 (lower is better) Translates to: VAVDSGTNGLGSCDL*KLSDGGTVKTSPIS Trigger: AGATATTGGAGATGTTTTAACAGTCCCTCCGTCACTTAACTTCCACAAGTCACAGCTACCGAGACCGTTAGTTCCTGAATCTACTGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR GCA 90 bp | GTCGGGGAACAAATGAAGGAGAGGCAAGAAGTTATTACAGAGACATaGCCTAGTAACTCTTCTAAAAGTGAATCCACAAGGAAATCACTG | + |
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Preference number: 1 (lower is better) Translates to: VGEQMKERQEVITET*PSNSSKSESTRKSL Trigger: CAGTGATTTCCTTGTGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCCTCTCCTTCATTTGTTCCCCGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAGCTTTGTCCAGCGTCTaGGGTGGGAGTGCTGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: VLLMSGLISSPSDAGAVKALSSV*GGSAAR Trigger: ACGGGCAGCACTCCCACCTCAGACGCTGGACAAAGC...TTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAAGCCCTGGGTCCGATGATTaGGAACCACAGTTCTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LLMSGLISSPSDAGAVKSPGSDD*EPQFLG Trigger: TCCCAAGAACTGTGGTTCCCAATCATCGGACCCAGG...GCTTTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAAGCGGGAACCACAGTTCTTaGGACTGGAAAGTGAACTGG | + |
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Preference number: 2 (lower is better) Translates to: LLMSGLISSPSDAGAVKSGNHSS*DWKVNW Trigger: CCAGTTCACTTTCCAGTCCCAAGAACTGTGGTTCCC...GCTTTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAAATTTTCCCAACTCCTaGTTTGTCCAGCGTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VLLMSGLISSPSDAGAVKNFPNS*FVQRLR Trigger: CCTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATT...TTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR-3UTR TCA 90 bp | GAGACCCTGGGTCCGATGATTGGGAACCACAGTTCTTGGGACTGGAAAGTGAACATTTTCCATATTTCCTaGATTTTCCCAACTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ETLGPMIGNHSSWDWKVNIFHIS*IFPTPA Trigger: AGCAGGAGTTGGGAAAATTCAGGAAATATGGAAAAT...GTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAATCATCGGACCCAGGGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGAAGTTATTACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCACACAGTTCTTGGGACTaGAAAGTGAACTGGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: GKKLLQRHALVTLLKVNPHSSWD*KVNWSV Trigger: AACACTCCAGTTCACTTTCCAGTCCCAAGAACTGTG...TGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCACAAGGATTCCAAATGGTGTGAGGCTATGAATATTGATCATTTAGCTTCAGACTGGAAAGTGAACTaGAGTGTTAAGCCAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: LHKDSKWCEAMNIDHLASDWKVN*SVKPME Trigger: TTCCATTGGCTTAACACTCCAGTTCACTTTCCAGTC...TGAAGCTAAATGATCAATATTCATAGCCTCACACCATTTGGAATCCTTGTGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR TCA 72 bp | TTCCTGATGGGGTGGAAGAATGAGAGTCAGAGGGGCTaGGCAGGTGGCATCGATCACGGCAAAGCTGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: FLMGWKNESQRG*AGGIDHGKAED Trigger: ATCTTCAGCTTTGCCGTGATCGATGCCACCTGCTCAGCCCCTCTGACTCTCATTCTTCCACCCCATCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR-3UTR CAA 90 bp | TTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAAGCGGCGGGTGCACAAGTTaGCAGGAAGGGGGCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LLMSGLISSPSDAGAVKSGGCTS*QEGGFP Trigger: AGGAAAGCCCCCTTCCTGCAAACTTGTGCACCCGCC...GCTTTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR CCA 72 bp | CTGGGTCCGATGATTGGGAACCACAGTTCTTGGGACTaGAAAGTGAACTGGAGTGTTAAGCCAATGGAATTG | + |
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Preference number: 3 (lower is better) Translates to: LGPMIGNHSSWD*KVNWSVKPMEL Trigger: CAATTCCATTGGCTTAACACTCCAGTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAATCATCGGACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR CCA 72 bp | ATTGGGAACCACAGTTCTTGGGACTGGAAAGTGAACTaGAGTGTTAAGCCAATGGAATTGAAAGTGAGAATC | + |
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Preference number: 3 (lower is better) Translates to: IGNHSSWDWKVN*SVKPMELKVRI Trigger: GATTCTCACTTTCAATTCCATTGGCTTAACACTCCAGTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| 3UTR GCA 72 bp | CAAATGAAGGAGAGGCAAGAAGTTATTACAGAGACATaGCCTAGTAACTCTTCTAAAAGTGAATCCACAAGG | + |
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Preference number: 3 (lower is better) Translates to: QMKERQEVITET*PSNSSKSESTR Trigger: CCTTGTGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCCTCTCCTTCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | CCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGGTGGGAGCACCCGTCGTCCTTCTaGGCTGGCTGCACGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PYFLNFPNSCFVQRLRWEHPSSF*AGCTSR Trigger: CCTGGACGTGCAGCCAGCTCAGAAGGACGACGGGTG...CTCCCACCTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | TTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAAGCAGGTGCTCACGGCATTaGTCCAAGCCAAGACGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLMSGLISSPSDAGAVKSRCSRH*SKPRRG Trigger: GCCCCGTCTTGGCTTGGATCAATGCCGTGAGCACCT...GCTTTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | GATTCAGGAACTAACGGTCTCGGTAGCTGTGACTTGTGGAAGTTAAGTGACGGACCCGGGTTCCATAAGTaGGTGCAGGTTTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: DSGTNGLGSCDLWKLSDGPGFHK*VQVSSG Trigger: GCCAGAGGAAACCTGCACTCACTTATGGAACCCGGG...TCCGTCACTTAACTTCCACAAGTCACAGCTACCGAGACCGTTAGTTCCTGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | GAGACCCTGGGTCCGATGATTGGGAACCACAGTTCTTGGGACTGGAAAGTGAACGAGCCACAGGTTGTCTaGAATCACAATGTAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ETLGPMIGNHSSWDWKVNEPQVV*NHNVVH Trigger: GTGGACTACATTGTGATTTCAGACAACCTGTGGCTC...GTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAATCATCGGACCCAGGGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | TCCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGGTGGGACCTCGATGCCATGGATaGAGAGAGACGGATACCTCC | + |
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Preference number: 4 (lower is better) Translates to: SIFPEFSQLLLCPASEVGPRCHG*RETDTS Trigger: GGAGGTATCCGTCTCTCTCCATCCATGGCATCGAGG...TCCCACCTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | TCCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGGTGGGAGGCAATTGGAATGGTTaGCCCATCCCGGATCATGTC | + |
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Preference number: 4 (lower is better) Translates to: SIFPEFSQLLLCPASEVGGNWNG*PIPDHV Trigger: GACATGATCCGGGATGGGTCAACCATTCCAATTGCC...TCCCACCTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR GCA 90 bp | TTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAAGCTTCACGGGAAGATCCTaGTGCAGAGCTCTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLMSGLISSPSDAGAVKSFTGRS*CRALKV Trigger: CACCTTCAGAGCTCTGCAGCAGGATCTTCCCGTGAA...GCTTTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | GAGACCCTGGGTCCGATGATTGGGAACCACAGTTCTTGGGACTGGAAAGTGAACTTTTGGCAATTGGAATaGTTGACCCATCCCGGATCA | + |
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Preference number: 4 (lower is better) Translates to: ETLGPMIGNHSSWDWKVNFWQLE*LTHPGS Trigger: TGATCCGGGATGGGTCAACCATTCCAATTGCCAAAA...GTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAATCATCGGACCCAGGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR GCA 90 bp | GTCTTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAGGTTCCATAAGTGAGTaGAGGTTTCCTCTGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VLLMSGLISSPSDAGAVKGSISE*RFPLAE Trigger: CTCAGCCAGAGGAAACCTGCACTCACTTATGGAACC...TTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR GCA 90 bp | TCCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGGTGGGAGGATACCTCCACAGGTaGATCAGAAGTTCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SIFPEFSQLLLCPASEVGGYLHR*IRSSSL Trigger: CAAGGAGGAACTTCTGATGCACCTGTGGAGGTATCC...TCCCACCTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | GAGACCCTGGGTCCGATGATTGGGAACCACAGTTCTTGGGACTGGAAAGTGAACCAATGTAGTCCACACTaGAGAAGAAGTGGTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: ETLGPMIGNHSSWDWKVNQCSPH*RRSGPF Trigger: AAAAGGACCACTTCTTCTCCAGTGTGGACTACATTG...GTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAATCATCGGACCCAGGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | GGCAAGAAGTTATTACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCAACTTCACCTCCACCGTaGAGTAGCAGTTCCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GKKLLQRHALVTLLKVNPTSPPP*SSSSPG Trigger: CCCGGGGGAACTGCTACTTCACGGTGGAGGTGAAGT...TGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | GACTTGTGGAAGTTAAGTGACGGAGGGACTGTTAAAACATCTCCAATATCTGTCGTTCCTCCAGGGCGATaGAACCGGCTTCTTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: DLWKLSDGGTVKTSPISVVPPGR*NRLLPF Trigger: GAATGGAAGAAGCCGGTTCCATCGCCCTGGAGGAAC...GACAGATATTGGAGATGTTTTAACAGTCCCTCCGTCACTTAACTTCCACAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | TCATTTTCCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGCAGGTTTCCTCTGGCTaGGCCACAGGTTGTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: SFSIFPEFSQLLLCPASEQVSSG*ATGCLK Trigger: TTTCAGACAACCTGTGGCTCAGCCAGAGGAAACCTG...CTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGGAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | TTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAAGCACACTGGAGAAGAAGTaGTCCTTTTCTCTCATGACG | + |
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Preference number: 4 (lower is better) Translates to: LLMSGLISSPSDAGAVKSTLEKK*SFSLMT Trigger: CGTCATGAGAGAAAAGGACCACTTCTTCTCCAGTGT...GCTTTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | TCCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGGTGGGAACACTGGAAGGCATCTaGTGTCCTGAATGCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SIFPEFSQLLLCPASEVGTLEGI*CPECCF Trigger: AAAACAGCATTCAGGACACCAGATGCCTTCCAGTGT...TCCCACCTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | ACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCACAAGGAAATCACTGCAGCCATTGGTTCGTTaGGGATGCCACCAAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TETCPSNSSKSESTRKSLQPLVR*GCHQRF Trigger: GAACCTTTGGTGGCATCCTCAACGAACCAATGGCTG...CAGTGATTTCCTTGTGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | GTCTTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAATGTAGTTCCACCTGTTaGTCTTCTCATTCTGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: VLLMSGLISSPSDAGAVKCSSTC*SSHSES Trigger: ACTCTCAGAATGAGAAGATCAACAGGTGGAACTACA...TTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR GCA 90 bp | GACTTGTGGAAGTTAAGTGACGGAGGGACTGTTAAAACATCTCCAATATCTGTCAGACGAGGCACAGGCTaGACAGAATCACTCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: DLWKLSDGGTVKTSPISVRRGTG*TESLSM Trigger: CATTGAGAGTGATTCTGTGCAGCCTGTGCCTCGTCT...GACAGATATTGGAGATGTTTTAACAGTCCCTCCGTCACTTAACTTCCACAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR GCA 90 bp | GGCAAGAAGTTATTACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCACAAAGGCACCCTCGATaGCATGGATGGAGAGAGACG | + |
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Preference number: 4 (lower is better) Translates to: GKKLLQRHALVTLLKVNPQRHPR*HGWRET Trigger: CGTCTCTCTCCATCCATGGCATCGAGGGTGCCTTTG...TGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | GACTTGTGGAAGTTAAGTGACGGAGGGACTGTTAAAACATCTCCAATATCTGTCCAGAATCACTCTCAATaGCCACCCACTCCTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DLWKLSDGGTVKTSPISVQNHSQ*PPTPSV Trigger: CACTGAAGGAGTGGGTGGCCATTGAGAGTGATTCTG...GACAGATATTGGAGATGTTTTAACAGTCCCTCCGTCACTTAACTTCCACAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | GACTTGTGGAAGTTAAGTGACGGAGGGACTGTTAAAACATCTCCAATATCTGTCAACCAAGTCAGCCATTaGTTCGTTGAGGATGCCACC | + |
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Preference number: 4 (lower is better) Translates to: DLWKLSDGGTVKTSPISVNQVSH*FVEDAT Trigger: GGTGGCATCCTCAACGAACCAATGGCTGACTTGGTT...GACAGATATTGGAGATGTTTTAACAGTCCCTCCGTCACTTAACTTCCACAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | GACTTGTGGAAGTTAAGTGACGGAGGGACTGTTAAAACATCTCCAATATCTGTCCTCCAAACACTGTTTTaGTGGTTCTCTGTGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: DLWKLSDGGTVKTSPISVLQTLF*WFSVLQ Trigger: TTGCAGCACAGAGAACCATCAAAACAGTGTTTGGAG...GACAGATATTGGAGATGTTTTAACAGTCCCTCCGTCACTTAACTTCCACAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR GCA 90 bp | GACTTGTGGAAGTTAAGTGACGGAGGGACTGTTAAAACATCTCCAATATCTGTCATCTGGTGTCCTGAATaGTGTTTTGACAACTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: DLWKLSDGGTVKTSPISVIWCPE*CFDNSR Trigger: CCTGGAGTTGTCAAAACAGCATTCAGGACACCAGAT...GACAGATATTGGAGATGTTTTAACAGTCCCTCCGTCACTTAACTTCCACAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | GGCAAGAAGTTATTACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCAGCCAAGGCCATCATCTaGAAGAGCTTCTGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GKKLLQRHALVTLLKVNPAKAII*KSFCLR Trigger: TCTCAGACAGAAGCTCTTCCAGATGATGGCCTTGGC...TGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | ACTGTTAAAACATCTCCAATATCTGTCTGTGCCTTCGAAACCTTTCATTTTCCAAGTGCAGGTTTCCTCTaGCTGAGCCACAGGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: TVKTSPISVCAFETFHFPSAGFL*LSHRLS Trigger: AGACAACCTGTGGCTCAGCCAGAGGAAACCTGCACT...TGGAAAATGAAAGGTTTCGAAGGCACAGACAGATATTGGAGATGTTTTAACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR TCA 90 bp | GGCAAGAAGTTATTACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCAGCCACCAAAGGTTCCTaGGTGGAAATCTTGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: GKKLLQRHALVTLLKVNPATKGS*VEILIS Trigger: AGAGATCAAGATTTCCACTCAGGAACCTTTGGTGGC...TGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR GCA 90 bp | ACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCACAAGGAAATCACTGTCCCTCTGTAATAGGTaGCATTTGATCATAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: TETCPSNSSKSESTRKSLSLCNR*HLIIDS Trigger: GGAATCTATGATCAAATGGCACCTATTACAGAGGGA...CAGTGATTTCCTTGTGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | TCATTTTCCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGACTTGGTTGATGTTCTaGTATTCTTCTAGGTCCATA | + |
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Preference number: 4 (lower is better) Translates to: SFSIFPEFSQLLLCPASETWLMF*YSSRSI Trigger: TATGGACCTAGAAGAATACCAGAACATCAACCAAGT...CTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGGAAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | GGCAAGAAGTTATTACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCATTTTGTGTGATAGCCTaGAATATTTTGGCAATTGGA | + |
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Preference number: 4 (lower is better) Translates to: GKKLLQRHALVTLLKVNPFCVIA*NILAIG Trigger: TCCAATTGCCAAAATATTCCAGGCTATCACACAAAA...TGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CCA 90 bp | ACTGTTAAAACATCTCCAATATCTGTCTGTGCCTTCGAAACCTTTCATTTTCCATCAGAAGTTCCTCCTTaGTATCAAACAGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVKTSPISVCAFETFHFPSEVPP*YQTEIS Trigger: AGAAATTTCTGTTTGATACCAAGGAGGAACTTCTGA...TGGAAAATGAAAGGTTTCGAAGGCACAGACAGATATTGGAGATGTTTTAACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 90 bp | GTCCATACAGTTTCCCATCCACCTCTGTCAGTGTGTAGGGGTCCGTaGGCCACCCGTCGTCCTTCTGAGCTGGCTGCACGTCCAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VHTVSHPPLSVCRGP*ATRRPSELAARPGA Trigger: GGCACCTGGACGTGCAGCCAGCTCAGAAGGACGACGGGTGGCTCACGGACCCCTACACACTGACAGAGGTGGATGGGAAACTGTATGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS GCA 90 bp | CAAGTCTATGGACTCCACCCCAGCTCCCAGGTTCCGGAGTTTGTCTaGAGCCAAGGCCATCATCTGGAAGAGCTTCTGTCTGAGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QVYGLHPSSQVPEFV*SQGHHLEELLSETR Trigger: CCTCGTCTCAGACAGAAGCTCTTCCAGATGATGGCCTTGGCTGCAGACAAACTCCGGAACCTGGGAGCTGGGGTGGAGTCCATAGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070139.9 ENSMUST00000236714.2 |
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| CDS TCA 90 bp | GGAGTTTGTCTGCAGCCAAGGCCATCATCTGGAAGAGCTTCTGTCTaGGACGAGGCACAGGCTGCACAGAATCACTCTCAATGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GVCLQPRPSSGRASV*DEAQAAQNHSQWPP Trigger: GGGTGGCCATTGAGAGTGATTCTGTGCAGCCTGTGCCTCGTCTCAGACAGAAGCTCTTCCAGATGATGGCCTTGGCTGCAGACAAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070139.9 ENSMUST00000236714.2 |
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| CDS GCA 90 bp | AAGGCCATCATCTGGAAGAGCTTCTGTCTGAGACGAGGCACAGGCTaGACAGAATCACTCTCAATGGCCACCCACTCCTTCAGTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KAIIWKSFCLRRGTG*TESLSMATHSFSVC Trigger: GCAGACACTGAAGGAGTGGGTGGCCATTGAGAGTGATTCTGTGCAGCCTGTGCCTCGTCTCAGACAGAAGCTCTTCCAGATGATGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070139.9 ENSMUST00000236714.2 |
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| CDS GCA 90 bp | TCCATTCCCTCCAGGATGAGTTTGATGTTCACGGGAAGATCCTGCTaGAGAGCTCTGAAGGTGCTCACGGCATTGATCCAAGCCAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: SIPSRMSLMFTGRSC*RALKVLTALIQAKT Trigger: CGTCTTGGCTTGGATCAATGCCGTGAGCACCTTCAGAGCTCTGCAGCAGGATCTTCCCGTGAACATCAAACTCATCCTGGAGGGAATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CCA 90 bp | ATGACTGTTTTAGTTCCAGGCTCATCAAAGGCACCCTCGATGCCATaGATGGAGAGAGACGGATACCTCCACAGGTGCATCAGAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MTVLVPGSSKAPSMP*MERDGYLHRCIRSS Trigger: GGAACTTCTGATGCACCTGTGGAGGTATCCGTCTCTCTCCATCCATGGCATCGAGGGTGCCTTTGATGAGCCTGGAACTAAAACAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 90 bp | CCACCAGGCTACCTAGAAGAGCAACCAAGTCAGCCATTGGTTCGTTaGGGATGCCACCAAAGGTTCCTGAGTGGAAATCTTGATCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PPGYLEEQPSQPLVR*GCHQRFLSGNLDLY Trigger: GTAGAGATCAAGATTTCCACTCAGGAACCTTTGGTGGCATCCTCAACGAACCAATGGCTGACTTGGTTGCTCTTCTAGGTAGCCTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | CCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGGTGGGAGTCAGCCATTGGTTCGTaGAGGATGCCACCAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PYFLNFPNSCFVQRLRWESAIGS*RMPPKV Trigger: AACCTTTGGTGGCATCCTCAACGAACCAATGGCTGA...CTCCCACCTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | GTCTTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAATGGCAATTGGAATGGTaGACCCATCCCGGATCATGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLMSGLISSPSDAGAVKWQLEW*THPGSC Trigger: ACATGATCCGGGATGGGTCAACCATTCCAATTGCCA...TTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 90 bp | TCCATAAGTGAGTGCAGGTTTCCTCTGGCTGAGCCACAGGTTGTCTaGAATCACAATGTAGTCCACACTGGAGAAGAAGTGGTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SISECRFPLAEPQVV*NHNVVHTGEEVVLF Trigger: GAAAAGGACCACTTCTTCTCCAGTGTGGACTACATTGTGATTTCAGACAACCTGTGGCTCAGCCAGAGGAAACCTGCACTCACTTATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 90 bp | AACCAAGTCAGCCATTGGTTCGTTGAGGATGCCACCAAAGGTTCCTaGGTGGAAATCTTGATCTCTACACTTCACCTCCACCGTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NQVSHWFVEDATKGS*VEILISTLHLHREV Trigger: TACTTCACGGTGGAGGTGAAGTGTAGAGATCAAGATTTCCACTCAGGAACCTTTGGTGGCATCCTCAACGAACCAATGGCTGACTTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CCA 90 bp | ACAGCTCCCAGTGGGAGCATCATCACACTCTTTTGTGTGATAGCCTaGAATATTTTGGCAATTGGAATGGTTGACCCATCCCGGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: TAPSGSIITLFCVIA*NILAIGMVDPSRIM Trigger: CATGATCCGGGATGGGTCAACCATTCCAATTGCCAAAATATTCCAGGCTATCACACAAAAGAGTGTGATGATGCTCCCACTGGGAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CCA 90 bp | GATCTTCTCATTCTGAGAGTGCTCTCCATCGTCCACAGCTCCCAGTaGGAGCATCATCACACTCTTTTGTGTGATAGCCTGGAATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: DLLILRVLSIVHSSQ*EHHHTLLCDSLEYF Trigger: AAAATATTCCAGGCTATCACACAAAAGAGTGTGATGATGCTCCCACTGGGAGCTGTGGACGATGGAGAGCACTCTCAGAATGAGAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | GGCAAGAAGTTATTACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCAAAGGTGCTCACGGCATaGATCCAAGCCAAGACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKKLLQRHALVTLLKVNPKVLTA*IQAKTG Trigger: CCCCGTCTTGGCTTGGATCAATGCCGTGAGCACCTT...TGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGTAATAACTTCTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | TTGCTGATGTCAGGGTTGATTAGCTCTCCATCTGATGCTGGCGCTGTTAAAAGCGGAATATTTTGGCAATaGGAATGGTTGACCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLMSGLISSPSDAGAVKSGIFWQ*EWLTHP Trigger: GGGATGGGTCAACCATTCCAATTGCCAAAATATTCC...GCTTTTAACAGCGCCAGCATCAGATGGAGAGCTAATCAACCCTGACATCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 90 bp | ATCTTGTTGAAACTATTCCTTTTAGAGAAGACAGCTTCGAGATGCTaGGTTACCTGTTTCTCCACCACAGACGGAGACATGGTAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: ILLKLFLLEKTASRC*VTCFSTTDGDMVGT Trigger: AGTCCCTACCATGTCTCCGTCTGTGGTGGAGAAACAGGTAACTCAGCATCTCGAAGCTGTCTTCTCTAAAAGGAATAGTTTCAACAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | ACTGTTAAAACATCTCCAATATCTGTCTGTGCCTTCGAAACCTTTCATTTTCCAGGCCCTTGTTGTCTGTaGCTCCCCGTCCATACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVKTSPISVCAFETFHFPGPCCL*LPVHTV Trigger: AACTGTATGGACGGGGAGCAACAGACAACAAGGGCC...TGGAAAATGAAAGGTTTCGAAGGCACAGACAGATATTGGAGATGTTTTAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | CCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGGTGGGAGATCAGAAGTTCCTCCTaGGTATCAAACAGAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PYFLNFPNSCFVQRLRWEIRSSS*VSNRNF Trigger: GAAATTTCTGTTTGATACCAAGGAGGAACTTCTGAT...CTCCCACCTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | TTGCACAAGGATTCCAAATGGTGTGAGGCTATGAATATTGATCATTTAGCTTCACCCTCCAGGATGAGTTaGATGTTCACGGGAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LHKDSKWCEAMNIDHLASPSRMS*MFTGRS Trigger: GGATCTTCCCGTGAACATCAAACTCATCCTGGAGGG...TGAAGCTAAATGATCAATATTCATAGCCTCACACCATTTGGAATCCTTGTGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 90 bp | ACTCTTTTGTGTGATAGCCTGGAATATTTTGGCAATTGGAATGGTTaGCCCATCCCGGATCATGTCAGGATTAACTCCAAACACTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLLCDSLEYFGNWNG*PIPDHVRINSKHCF Trigger: AAAACAGTGTTTGGAGTTAATCCTGACATGATCCGGGATGGGTCAACCATTCCAATTGCCAAAATATTCCAGGCTATCACACAAAAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | GACTTGTGGAAGTTAAGTGACGGAGGGACTGTTAAAACATCTCCAATATCTGTCATAGCCTGGAATATTTaGGCAATTGGAATGGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DLWKLSDGGTVKTSPISVIAWNI*AIGMVD Trigger: GTCAACCATTCCAATTGCCAAAATATTCCAGGCTAT...GACAGATATTGGAGATGTTTTAACAGTCCCTCCGTCACTTAACTTCCACAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | TCATTTTCCATATTTCCTGAATTTTCCCAACTCCTGCTTTGTCCAGCGTCTGAGCATCATCACACTCTTTaGTGTGATAGCCTGGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSIFPEFSQLLLCPASEHHHTL*CDSLEY Trigger: ATATTCCAGGCTATCACACAAAAGAGTGTGATGATG...CTCAGACGCTGGACAAAGCAGGAGTTGGGAAAATTCAGGAAATATGGAAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | ACTGTTAAAACATCTCCAATATCTGTCTGTGCCTTCGAAACCTTTCATTTTCCAACTCCAAACACTGTTTaGATGGTTCTCTGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVKTSPISVCAFETFHFPTPNTV*MVLCAA Trigger: TGCAGCACAGAGAACCATCAAAACAGTGTTTGGAGT...TGGAAAATGAAAGGTTTCGAAGGCACAGACAGATATTGGAGATGTTTTAACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | TTGCACAAGGATTCCAAATGGTGTGAGGCTATGAATATTGATCATTTAGCTTCAGTCCTGAATGCTGTTTaGACAACTCCAGGAAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHKDSKWCEAMNIDHLASVLNAV*TTPGKR Trigger: CCTTTTTCCTGGAGTTGTCAAAACAGCATTCAGGAC...TGAAGCTAAATGATCAATATTCATAGCCTCACACCATTTGGAATCCTTGTGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS-3UTR CAA 90 bp | ACAGAGACATGCCCTAGTAACTCTTCTAAAAGTGAATCCACAAGGAAATCACTGCAGAAATTTCTCAACTaGGTTGATGTTCTGGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: TETCPSNSSKSESTRKSLQKFLN*VDVLVF Trigger: GAATACCAGAACATCAACCAAGTTGAGAAATTTCTG...CAGTGATTTCCTTGTGGATTCACTTTTAGAAGAGTTACTAGGGCATGTCTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CCA 90 bp | TGCATCAGAAGTTCCTCCTTGGTATCAAACAGAAATTTCTCAACTTaGTTGATGTTCTGGTATTCTTCTAGGTCCATATCAATGTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CIRSSSLVSNRNFST*LMFWYSSRSISMFL Trigger: TAAAAACATTGATATGGACCTAGAAGAATACCAGAACATCAACCAAGTTGAGAAATTTCTGTTTGATACCAAGGAGGAACTTCTGATGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 72 bp | GTTTCCCATCCACCTCTGTCAGTGTGTAGGGGTCCGTaGGCCACCCGTCGTCCTTCTGAGCTGGCTGCACGT | + |
|
Preference number: 6 (lower is better) Translates to: VSHPPLSVCRGP*ATRRPSELAAR Trigger: ACGTGCAGCCAGCTCAGAAGGACGACGGGTGGCTCACGGACCCCTACACACTGACAGAGGTGGATGGGAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CCA 72 bp | GTAGGGGTCCGTGAGCCACCCGTCGTCCTTCTGAGCTaGCTGCACGTCCAGGTGCCCATAGAAGCATACAGT | + |
|
Preference number: 6 (lower is better) Translates to: VGVREPPVVLLS*LHVQVPIEAYS Trigger: ACTGTATGCTTCTATGGGCACCTGGACGTGCAGCCAGCTCAGAAGGACGACGGGTGGCTCACGGACCCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 90 bp | TTCACGGGAAGATCCTGCTGCAGAGCTCTGAAGGTGCTCACGGCATaGATCCAAGCCAAGACGGGGCCCTTGTTGTCTGTTGCTCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: FTGRSCCRALKVLTA*IQAKTGPLLSVAPR Trigger: ACGGGGAGCAACAGACAACAAGGGCCCCGTCTTGGCTTGGATCAATGCCGTGAGCACCTTCAGAGCTCTGCAGCAGGATCTTCCCGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS GCA 72 bp | GGACTCCACCCCAGCTCCCAGGTTCCGGAGTTTGTCTaGAGCCAAGGCCATCATCTGGAAGAGCTTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLHPSSQVPEFV*SQGHHLEELLS Trigger: AGACAGAAGCTCTTCCAGATGATGGCCTTGGCTGCAGACAAACTCCGGAACCTGGGAGCTGGGGTGGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070139.9 ENSMUST00000236714.2 |
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| CDS CAA 90 bp | CTGAAGGTGCTCACGGCATTGATCCAAGCCAAGACGGGGCCCTTGTaGTCTGTTGCTCCCCGTCCATACAGTTTCCCATCCACCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LKVLTALIQAKTGPL*SVAPRPYSFPSTSV Trigger: GACAGAGGTGGATGGGAAACTGTATGGACGGGGAGCAACAGACAACAAGGGCCCCGTCTTGGCTTGGATCAATGCCGTGAGCACCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 90 bp | GCTCTGAAGGTGCTCACGGCATTGATCCAAGCCAAGACGGGGCCCTaGTTGTCTGTTGCTCCCCGTCCATACAGTTTCCCATCCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALKVLTALIQAKTGP*LSVAPRPYSFPSTS Trigger: AGAGGTGGATGGGAAACTGTATGGACGGGGAGCAACAGACAACAAGGGCCCCGTCTTGGCTTGGATCAATGCCGTGAGCACCTTCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 72 bp | TCTATGGACTCCACCCCAGCTCCCAGGTTCCGGAGTTaGTCTGCAGCCAAGGCCATCATCTGGAAGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMDSTPAPRFRS*SAAKAIIWKSF Trigger: GAAGCTCTTCCAGATGATGGCCTTGGCTGCAGACAAACTCCGGAACCTGGGAGCTGGGGTGGAGTCCATAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070139.9 ENSMUST00000236714.2 |
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| CDS CAA 72 bp | CTCACGGCATTGATCCAAGCCAAGACGGGGCCCTTGTaGTCTGTTGCTCCCCGTCCATACAGTTTCCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LTALIQAKTGPL*SVAPRPYSFPS Trigger: GGATGGGAAACTGTATGGACGGGGAGCAACAGACAACAAGGGCCCCGTCTTGGCTTGGATCAATGCCGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 72 bp | GTGCTCACGGCATTGATCCAAGCCAAGACGGGGCCCTaGTTGTCTGTTGCTCCCCGTCCATACAGTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLTALIQAKTGP*LSVAPRPYSFP Trigger: TGGGAAACTGTATGGACGGGGAGCAACAGACAACAAGGGCCCCGTCTTGGCTTGGATCAATGCCGTGAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 90 bp | GAACCCAAGTCTATGGACTCCACCCCAGCTCCCAGGTTCCGGAGTTaGTCTGCAGCCAAGGCCATCATCTGGAAGAGCTTCTGTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EPKSMDSTPAPRFRS*SAAKAIIWKSFCLR Trigger: TCTCAGACAGAAGCTCTTCCAGATGATGGCCTTGGCTGCAGACAAACTCCGGAACCTGGGAGCTGGGGTGGAGTCCATAGACTTGGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070139.9 ENSMUST00000236714.2 |
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| CDS CCA 72 bp | TCTGACCATCAGGCATCTGCTGAGAACCCAAGTCTATaGACTCCACCCCAGCTCCCAGGTTCCGGAGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SDHQASAENPSL*TPPQLPGSGVC Trigger: ACAAACTCCGGAACCTGGGAGCTGGGGTGGAGTCCATAGACTTGGGTTCTCAGCAGATGCCTGATGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 72 bp | AGATCCTGCTGCAGAGCTCTGAAGGTGCTCACGGCATaGATCCAAGCCAAGACGGGGCCCTTGTTGTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSCCRALKVLTA*IQAKTGPLLSV Trigger: AACAGACAACAAGGGCCCCGTCTTGGCTTGGATCAATGCCGTGAGCACCTTCAGAGCTCTGCAGCAGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 72 bp | CTGCAGCCAAGGCCATCATCTGGAAGAGCTTCTGTCTaGGACGAGGCACAGGCTGCACAGAATCACTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQPRPSSGRASV*DEAQAAQNHSQ Trigger: TTGAGAGTGATTCTGTGCAGCCTGTGCCTCGTCTCAGACAGAAGCTCTTCCAGATGATGGCCTTGGCTGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070139.9 ENSMUST00000236714.2 |
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| CDS GCA 72 bp | ATCTGGAAGAGCTTCTGTCTGAGACGAGGCACAGGCTaGACAGAATCACTCTCAATGGCCACCCACTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IWKSFCLRRGTG*TESLSMATHSF Trigger: GAAGGAGTGGGTGGCCATTGAGAGTGATTCTGTGCAGCCTGTGCCTCGTCTCAGACAGAAGCTCTTCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070139.9 ENSMUST00000236714.2 |
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| CDS GCA 72 bp | CCCTCCAGGATGAGTTTGATGTTCACGGGAAGATCCTaGTGCAGAGCTCTGAAGGTGCTCACGGCATTGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSRMSLMFTGRS*CRALKVLTALI Trigger: GATCAATGCCGTGAGCACCTTCAGAGCTCTGCAGCAGGATCTTCCCGTGAACATCAAACTCATCCTGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
||
| CDS CCA 72 bp | TTAGTTCCAGGCTCATCAAAGGCACCCTCGATGCCATaGATGGAGAGAGACGGATACCTCCACAGGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LVPGSSKAPSMP*MERDGYLHRCI Trigger: GATGCACCTGTGGAGGTATCCGTCTCTCTCCATCCATGGCATCGAGGGTGCCTTTGATGAGCCTGGAACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 72 bp | ATGGAACCGGCTTCTTCCATTCCCTCCAGGATGAGTTaGATGTTCACGGGAAGATCCTGCTGCAGAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: MEPASSIPSRMS*MFTGRSCCRAL Trigger: CAGAGCTCTGCAGCAGGATCTTCCCGTGAACATCAAACTCATCCTGGAGGGAATGGAAGAAGCCGGTTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
||
| CDS GCA 72 bp | TCCAGGATGAGTTTGATGTTCACGGGAAGATCCTGCTaGAGAGCTCTGAAGGTGCTCACGGCATTGATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SRMSLMFTGRSC*RALKVLTALIQ Trigger: TTGGATCAATGCCGTGAGCACCTTCAGAGCTCTGCAGCAGGATCTTCCCGTGAACATCAAACTCATCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
||
| CDS CCA 72 bp | ATTCTGAGAGTGCTCTCCATCGTCCACAGCTCCCAGTaGGAGCATCATCACACTCTTTTGTGTGATAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ILRVLSIVHSSQ*EHHHTLLCDSL Trigger: CAGGCTATCACACAAAAGAGTGTGATGATGCTCCCACTGGGAGCTGTGGACGATGGAGAGCACTCTCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
||
| CDS TCA 72 bp | GAGTGCAGGTTTCCTCTGGCTGAGCCACAGGTTGTCTaGAATCACAATGTAGTCCACACTGGAGAAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ECRFPLAEPQVV*NHNVVHTGEEV Trigger: CACTTCTTCTCCAGTGTGGACTACATTGTGATTTCAGACAACCTGTGGCTCAGCCAGAGGAAACCTGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 72 bp | AGCCATTGGTTCGTTGAGGATGCCACCAAAGGTTCCTaGGTGGAAATCTTGATCTCTACACTTCACCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SHWFVEDATKGS*VEILISTLHLH Trigger: GTGGAGGTGAAGTGTAGAGATCAAGATTTCCACTCAGGAACCTTTGGTGGCATCCTCAACGAACCAATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 72 bp | CTACCTAGAAGAGCAACCAAGTCAGCCATTGGTTCGTaGAGGATGCCACCAAAGGTTCCTGAGTGGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LPRRATKSAIGS*RMPPKVPEWKS Trigger: AGATTTCCACTCAGGAACCTTTGGTGGCATCCTCAACGAACCAATGGCTGACTTGGTTGCTCTTCTAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 72 bp | TACCTAGAAGAGCAACCAAGTCAGCCATTGGTTCGTTaGGGATGCCACCAAAGGTTCCTGAGTGGAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: YLEEQPSQPLVR*GCHQRFLSGNL Trigger: AAGATTTCCACTCAGGAACCTTTGGTGGCATCCTCAACGAACCAATGGCTGACTTGGTTGCTCTTCTAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS GCA 72 bp | ATGCCATGGATGGAGAGAGACGGATACCTCCACAGGTaGATCAGAAGTTCCTCCTTGGTATCAAACAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: MPWMERDGYLHR*IRSSSLVSNRN Trigger: ATTTCTGTTTGATACCAAGGAGGAACTTCTGATGCACCTGTGGAGGTATCCGTCTCTCTCCATCCATGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 72 bp | AACACTGTTTTGATGGTTCTCTGTGCTGCAAGGTACTaGGTATCATTGACGTTTGCAGTCCATGGGTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: NTVLMVLCAARY*VSLTFAVHGWS Trigger: ACTCCACCCATGGACTGCAAACGTCAATGATACTCAGTACCTTGCAGCACAGAGAACCATCAAAACAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 72 bp | CATGGGTGGAGTCCTAGGACCATAGAAACGGCCATCTaGTTGAAACTATTCCTTTTAGAGAAGACAGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: HGWSPRTIETAI*LKLFLLEKTAS Trigger: CGAAGCTGTCTTCTCTAAAAGGAATAGTTTCAACAAGATGGCCGTTTCTATGGTCCTAGGACTCCACCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 90 bp | AGTGGGAGCATCATCACACTCTTTTGTGTGATAGCCTGGAATATTTaGGCAATTGGAATGGTTGACCCATCCCGGATCATGTCAGGATTA | + |
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Preference number: 6 (lower is better) Translates to: SGSIITLFCVIAWNI*AIGMVDPSRIMSGL Trigger: TAATCCTGACATGATCCGGGATGGGTCAACCATTCCAATTGCCAAAATATTCCAGGCTATCACACAAAAGAGTGTGATGATGCTCCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CCA 72 bp | AGTGGGAGCATCATCACACTCTTTTGTGTGATAGCCTaGAATATTTTGGCAATTGGAATGGTTGACCCATCC | + |
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Preference number: 6 (lower is better) Translates to: SGSIITLFCVIA*NILAIGMVDPS Trigger: GGATGGGTCAACCATTCCAATTGCCAAAATATTCCAGGCTATCACACAAAAGAGTGTGATGATGCTCCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 72 bp | GACGGATACCTCCACAGGTGCATCAGAAGTTCCTCCTaGGTATCAAACAGAAATTTCTCAACTTGGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: DGYLHRCIRSSS*VSNRNFSTWLM Trigger: CATCAACCAAGTTGAGAAATTTCTGTTTGATACCAAGGAGGAACTTCTGATGCACCTGTGGAGGTATCCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 90 bp | ATGGAGAGAGACGGATACCTCCACAGGTGCATCAGAAGTTCCTCCTaGGTATCAAACAGAAATTTCTCAACTTGGTTGATGTTCTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: MERDGYLHRCIRSSS*VSNRNFSTWLMFWY Trigger: ATACCAGAACATCAACCAAGTTGAGAAATTTCTGTTTGATACCAAGGAGGAACTTCTGATGCACCTGTGGAGGTATCCGTCTCTCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS TCA 72 bp | TGTGATAGCCTGGAATATTTTGGCAATTGGAATGGTTaGCCCATCCCGGATCATGTCAGGATTAACTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: CDSLEYFGNWNG*PIPDHVRINSK Trigger: TTTGGAGTTAATCCTGACATGATCCGGGATGGGTCAACCATTCCAATTGCCAAAATATTCCAGGCTATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CAA 72 bp | ATCATCACACTCTTTTGTGTGATAGCCTGGAATATTTaGGCAATTGGAATGGTTGACCCATCCCGGATCATG | + |
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Preference number: 6 (lower is better) Translates to: IITLFCVIAWNI*AIGMVDPSRIM Trigger: CATGATCCGGGATGGGTCAACCATTCCAATTGCCAAAATATTCCAGGCTATCACACAAAAGAGTGTGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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| CDS CCA 72 bp | AGTTCCTCCTTGGTATCAAACAGAAATTTCTCAACTTaGTTGATGTTCTGGTATTCTTCTAGGTCCATATCA | + |
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Preference number: 6 (lower is better) Translates to: SSSLVSNRNFST*LMFWYSSRSIS Trigger: TGATATGGACCTAGAAGAATACCAGAACATCAACCAAGTTGAGAAATTTCTGTTTGATACCAAGGAGGAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070139.9 |
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