Pregenerated sensors for CNBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030057Ensembl transcript IDs: ENSMUST00000032138.15, ENSMUST00000113617.3, ENSMUST00000113619.8, ENSMUST00000204653.3, ENSMUST00000204890.3
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCTACATGGGAACACACTCAAACCCAGAAGGGCTTACTGGTCTaGCTGAACTCTTCCCATTCATTAATCCCTATTCACCAGTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: PPTWEHTQTQKGLLV*LNSSHSLIPIHQWH Trigger: GTGCCACTGGTGAATAGGGATTAATGAATGGGAAGAGTTCAGTCAGACCAGTAAGCCCTTCTGGGTTTGAGTGTGTTCCCATGTAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR TCA 90 bp | CTGCCTGGAACTTTAGAGCAAGATTACCTCACATACCTCACTTGCTaGGTTTTGAAATTAAGGGCACACACAACCACCCCCATGCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LPGTLEQDYLTYLTC*VLKLRAHTTTPMQF Trigger: AAACTGCATGGGGGTGGTTGTGTGTGCCCTTAATTTCAAAACTCAGCAAGTGAGGTATGTGAGGTAATCTTGCTCTAAAGTTCCAGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
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| 3UTR TCA 90 bp | AACACATTTGTCTTTTCAGTTTACTCCCAACTCAACTGTATATTCTaGGGGCCTGATGCAGATGTTACTCGATGTTATTTAATAGCTACT | + |
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Preference number: 1 (lower is better) Translates to: NTFVFSVYSQLNCIF*GPDADVTRCYLIAT Trigger: AGTAGCTATTAAATAACATCGAGTAACATCTGCATCAGGCCCTCAGAATATACAGTTGAGTTGGGAGTAAACTGAAAAGACAAATGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR CCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCACTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG | + |
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Preference number: 2 (lower is better) Translates to: RHWDEAASVLGFEPDSLALSANL*PVKRIQ Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR CCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCAAGATGCTTCCAGAATTaGTTTTACCTCCTACATGGG | + |
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Preference number: 2 (lower is better) Translates to: RHWDEAASVLGFEPDSLARCFQN*FYLLHG Trigger: CCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCT...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR CAA 90 bp | GGCTCTGCCTGGAACTTTAGAGCAAGATTACCTCACATACCTCACTaGCTGAGTTTTGAAATTAAGGGCACACACAACCACCCCCATGCA | + |
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Preference number: 2 (lower is better) Translates to: GSAWNFRARLPHIPH*LSFEIKGTHNHPHA Trigger: TGCATGGGGGTGGTTGTGTGTGCCCTTAATTTCAAAACTCAGCAAGTGAGGTATGTGAGGTAATCTTGCTCTAAAGTTCCAGGCAGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCAAACCCAGAAGGGCTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG | + |
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Preference number: 2 (lower is better) Translates to: ASRIGFTSYMGTHSNPEGLSANL*PVKRIQ Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...CCCTTCTGGGTTTGAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR CCA 90 bp | CGATGTTATTTAATAGCTACTGAGGTCAGACAATCCAAGGCCGTCATTATGCTAATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: RCYLIATEVRQSKAVIMLIPIHQ*HGKGVL Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...TAGCATAATGACGGCCTTGGATTGTCTGACCTCAGTAGCTATTAAATAACATCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGTTTACTCCCAACTCAACTGTATATTCTGAGGGCCTGATGCAGATGTTACTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG | + |
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Preference number: 2 (lower is better) Translates to: FQFTPNSTVYSEGLMQMLLSANL*PVKRIQ Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...TAACATCTGCATCAGGCCCTCAGAATATACAGTTGAGTTGGGAGTAAACTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR TCA 90 bp | CGATGTTATTTAATAGCTACTGAGGTCAGACAATCCAAGGCCGTCATTATGCTACCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RCYLIATEVRQSKAVIMLPTFGQ*RGFREN Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...TAGCATAATGACGGCCTTGGATTGTCTGACCTCAGTAGCTATTAAATAACATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGTTTACTCCCAACTCAACTGTATATTCTGAGGGCCTGATGCAGATGTTACCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: FQFTPNSTVYSEGLMQMLPTFGQ*RGFREN Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...TAACATCTGCATCAGGCCCTCAGAATATACAGTTGAGTTGGGAGTAAACTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTATGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACAAAGGGCTTACTGGTCTaGCTGAACTCTTCCCATTCA | + |
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Preference number: 2 (lower is better) Translates to: IYGSLDASRIGFTSYMGTKGLLV*LNSSHS Trigger: TGAATGGGAAGAGTTCAGTCAGACCAGTAAGCCCTT...TGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCGTCATTATGCTAAGAATTAAAGTTATTTATGGAAGCTTAGATGCTTCCGGAACAGCCTCTATCTaGCAACCTTTGGCCAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: KAVIMLRIKVIYGSLDASGTASI*QPLASE Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCC...GGAAGCATCTAAGCTTCCATAAATAACTTTAATTCTTAGCATAATGACGGCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR GCA 90 bp | AATTATGCTAACTCTGAGCATCGGATGTTTACTCTGGGTTTTAGATTTAGTCTTGGAACAGCCTCTATCTaGCAACCTTTGGCCAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: NYANSEHRMFTLGFRFSLGTASI*QPLASE Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCC...AAGACTAAATCTAAAACCCAGAGTAAACATCCGATGCTCAGAGTTAGCATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCCATCTCTACATAGATTCTGGAACTAAAAACTCAAGCCACCAAGCTTATGGAACAGCCTCTATCTaGCAACCTTTGGCCAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: FFHLYIDSGTKNSSHQAYGTASI*QPLASE Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCC...ATAAGCTTGGTGGCTTGAGTTTTTAGTTCCAGAATCTATGTAGAGATGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCGTCATTATGCTAAGAATTAAAGTTATTTATGGAAGCTTAGATGCTTCCATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: KAVIMLRIKVIYGSLDASIPIHQ*HGKGVL Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...GGAAGCATCTAAGCTTCCATAAATAACTTTAATTCTTAGCATAATGACGGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR TCA 90 bp | AATTATGCTAACTCTGAGCATCGGATGTTTACTCTGGGTTTTAGATTTAGTCTTCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: NYANSEHRMFTLGFRFSLPTFGQ*RGFREN Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...AAGACTAAATCTAAAACCCAGAGTAAACATCCGATGCTCAGAGTTAGCATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCCATCTCTACATAGATTCTGGAACTAAAAACTCAAGCCACCAAGCTTATCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: FFHLYIDSGTKNSSHQAYPTFGQ*RGFREN Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...ATAAGCTTGGTGGCTTGAGTTTTTAGTTCCAGAATCTATGTAGAGATGGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
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| 3UTR TCA 72 bp | TGGGAACACACTCAAACCCAGAAGGGCTTACTGGTCTaGCTGAACTCTTCCCATTCATTAATCCCTATTCAC | + |
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Preference number: 3 (lower is better) Translates to: WEHTQTQKGLLV*LNSSHSLIPIH Trigger: GTGAATAGGGATTAATGAATGGGAAGAGTTCAGTCAGACCAGTAAGCCCTTCTGGGTTTGAGTGTGTTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR-3UTR CAA 90 bp | GGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCTACCAAACTCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA | + |
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Preference number: 3 (lower is better) Translates to: GTERGFFNKALYITPLPNSICQP*ASEEDS Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...GTTTGGTAGAGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR TCA 72 bp | AGTTTACTCCCAACTCAACTGTATATTCTGAGGGCCTaGTGCAGATGTTACTCGATGTTATTTAATAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: SLLPTQLYILRA*CRCYSMLFNSY Trigger: GTAGCTATTAAATAACATCGAGTAACATCTGCATCAGGCCCTCAGAATATACAGTTGAGTTGGGAGTAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR TCA 72 bp | GTCTTTTCAGTTTACTCCCAACTCAACTGTATATTCTaGGGGCCTGATGCAGATGTTACTCGATGTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: VFSVYSQLNCIF*GPDADVTRCYL Trigger: TAAATAACATCGAGTAACATCTGCATCAGGCCCTCAGAATATACAGTTGAGTTGGGAGTAAACTGAAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | AGCTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGCACTCCCTGGCCCAGTaGCCAGATCGTCCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: SSLAWEQPLSANLWPVKRHSLAQ*PDRPHL Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCAGGGAGTG...CCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | GCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGACCGTGCAAGATGCCCTaGCTCGCCACAGCGGTAACA | + |
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Preference number: 4 (lower is better) Translates to: AWEQPLSANLWPVKRIQRPCKMP*LATAVT Trigger: TGTTACCGCTGTGGCGAGTCAGGGCATCTTGCACGG...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCACCGTGCAAGATGCCCTaGCTCGCCACAGCGGTAACA | + |
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Preference number: 4 (lower is better) Translates to: RHWDEAASVLGFEPDSLAPCKMP*LATAVT Trigger: TGTTACCGCTGTGGCGAGTCAGGGCATCTTGCACGG...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCACACTCCCTGGCCCAGTaGCCAGATCGTCCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: RHWDEAASVLGFEPDSLAHSLAQ*PDRPHL Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCAGGGAGTG...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | AGCTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGTTCTGCTCATCCGCGTaGTCACAGTCACGAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSLAWEQPLSANLWPVKRFCSSA*SQSRAR Trigger: TCTGGCTCGTGACTGTGACCACGCGGATGAGCAGAA...CCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | ACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TGLGTASICQPLASEEDSALALS*APCSPW Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | AGCTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGACGAGCCAGATGGCCTaGCTTGCCACAATTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: SSLAWEQPLSANLWPVKRTSQMA*LATIVA Trigger: TGCTACAATTGTGGCAAGCCAGGCCATCTGGCTCGT...CCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATCAGTCACGAGCCAGATaGCCTGGCTTGCCACAATTG | + |
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Preference number: 4 (lower is better) Translates to: LTGLGTASICQPLASEEDQSRAR*PGLPQL Trigger: CAATTGTGGCAAGCCAGGCCATCTGGCTCGTGACTG...ATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTTCTGCTCATCCGCGTaGTCACAGTCACGAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LAWEQPLSANLWPVKRIQFCSSA*SQSRAR Trigger: TCTGGCTCGTGACTGTGACCACGCGGATGAGCAGAA...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCACAATCCTTGGCAAGATaGCCAGACTCACCACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: RHWDEAASVLGFEPDSLAQSLAR*PDSPQR Trigger: CCGCTGTGGTGAGTCTGGTCATCTTGCCAAGGATTG...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | CTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACCGTGCAAGATGCCCTaGCTCGCCACAGCGGTAACA | + |
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Preference number: 4 (lower is better) Translates to: LGTASICQPLASEEDSEKPCKMP*LATAVT Trigger: TGTTACCGCTGTGGCGAGTCAGGGCATCTTGCACGG...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | AGCTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGCCAGATGGCCTGGCTTaGCACAATTGTAGCAGCATT | + |
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Preference number: 4 (lower is better) Translates to: SSLAWEQPLSANLWPVKRPDGLA*HNCSSI Trigger: AATGCTGCTACAATTGTGGCAAGCCAGGCCATCTGG...CCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | CTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACATTCCCGTGCAAGATaGCCTGACTCGCCACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LGTASICQPLASEEDSEKHSRAR*PDSPQR Trigger: CCGCTGTGGCGAGTCAGGGCATCTTGCACGGGAATG...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: LAWEQPLSANLWPVKRIQQSLAM*PPLPQL Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | ACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: TGLGTASICQPLASEEDSAPCSP*QCGHLY Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCAGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: RHWDEAASVLGFEPDSLAAPCSP*QCGHLY Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATACGAGCCAGATGGCCTaGCTTGCCACAATTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LTGLGTASICQPLASEEDTSQMA*LATIVA Trigger: TGCTACAATTGTGGCAAGCCAGGCCATCTGGCTCGT...ATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | ACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCATTCTGCTCATCCGCGTaGTCACAGTCACGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGLGTASICQPLASEEDSFCSSA*SQSRAR Trigger: TCTGGCTCGTGACTGTGACCACGCGGATGAGCAGAA...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCAGATCGTCCACACTTaGAGCATTCGTTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAWEQPLSANLWPVKRIQQIVHT*SIRCCS Trigger: TGAGCAGCAACGAATGCTTCAAGTGTGGACGATCTG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAWEQPLSANLWPVKRIQHSGNS*LHLSCC Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCCAGATGGCCTGGCTTaGCACAATTGTAGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LAWEQPLSANLWPVKRIQPDGLA*HNCSSI Trigger: AATGCTGCTACAATTGTGGCAAGCCAGGCCATCTGG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAACATTCCCGTGCAAGATaGCCTGACTCGCCACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WEQPLSANLWPVKRIQRKHSRAR*PDSPQR Trigger: CCGCTGTGGCGAGTCAGGGCATCTTGCACGGGAATG...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGTTCTACACCTTTGCCATCACCATCTGTACGTCCAGCATCGTCACTGGCACTCCCTGGCCCAGTaGCCAGATCGTCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KCVLHLCHHHLYVQHRHWHSLAQ*PDRPHL Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCAGGGAGTG...CCAGTGACGATGCTGGACGTACAGATGGTGATGGCAAAGGTGTAGAACACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCACAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RHWDEAASVLGFEPDSLAQSLAM*PPLPQL Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | ACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAACGAGCCAGATGGCCTaGCTTGCCACAATTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLGTASICQPLASEEDSTSQMA*LATIVA Trigger: TGCTACAATTGTGGCAAGCCAGGCCATCTGGCTCGT...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGACAGATCGTCCACACTTaGAGCATTCGTTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWEQPLSANLWPVKRIQRQIVHT*SIRCCS Trigger: TGAGCAGCAACGAATGCTTCAAGTGTGGACGATCTG...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | ACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCACACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLGTASICQPLASEEDSHSGNS*LHLSCC Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGACAGGCTTCATCCTCCTaGAGATCACAATCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWEQPLSANLWPVKRIQRQASSS*RSQSLA Trigger: TGCCAAGGATTGTGATCTGCAGGAGGATGAAGCCTG...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032138.15 |
||
| CDS-3UTR GCA 90 bp | CTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGTASICQPLASEEDSEKLSWAP*SPWQCG Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | CTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATGCAGATCACAATCCTTaGCAAGATGACCAGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGLGTASICQPLASEEDADHNP*QDDQTH Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTGC...ATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGTASICQPLASEEDSEKAPCSP*QCGHLY Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAAGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WEQPLSANLWPVKRIQRKALALS*APCSPW Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACAGTCACGAGCCAGATaGCCTGGCTTGCCACAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGTASICQPLASEEDSEKQSRAR*PGLPQL Trigger: CAATTGTGGCAAGCCAGGCCATCTGGCTCGTGACTG...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | CTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCAATTGATGGCTACATaGCCAGTTTCACCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: LAWEQPLSANLWPVKRIQQLMAT*PVSPHL Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAATTG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAACTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WEQPLSANLWPVKRIQRKLSWAP*SPWQCG Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | GCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCAAACCCAGAAGGGCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASRIGFTSYMGTHSNPEGLSWAP*SPWQCG Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...CCCTTCTGGGTTTGAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CTTACTGGTCTGACTGAACTCTTCCCATTCATTAATCCCTATTCACCAGTGGCACACTCCCTGGCCCAGTaGCCAGATCGTCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGLTELFPFINPYSPVAHSLAQ*PDRPHL Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCAGGGAGTG...TGCCACTGGTGAATAGGGATTAATGAATGGGAAGAGTTCAGTCAGACCAGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCAGCAGATCACAATCCTTaGCAAGATGACCAGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHWDEAASVLGFEPDSLAADHNP*QDDQTH Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTGC...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGTASICQPLASEEDSEKQSLAM*PPLPQL Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | ACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCACAATTGATGGCTACATaGCCAGTTTCACCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: TGLGTASICQPLASEEDSQLMAT*PVSPHL Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAATTG...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | CTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGTASICQPLASEEDSEKHSGNS*LHLSCC Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | GGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCTACCAAACCCGTGCAAGATGCCCTaGCTCGCCACAGCGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GTERGFFNKALYITPLPNPCKMP*LATAVT Trigger: TGTTACCGCTGTGGCGAGTCAGGGCATCTTGCACGG...GTTTGGTAGAGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | TTGAGCCAGATTCCCTGGCATAGCCTTCAACACATTTGTCTTTTCAGTTTACTCCATTCCCGTGCAAGATaGCCTGACTCGCCACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQIPWHSLQHICLFSLLHSRAR*PDSPQR Trigger: CCGCTGTGGCGAGTCAGGGCATCTTGCACGGGAATG...GAGTAAACTGAAAAGACAAATGTGTTGAAGGCTATGCCAGGGAATCTGGCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CTTACTGGTCTGACTGAACTCTTCCCATTCATTAATCCCTATTCACCAGTGGCAGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTGLTELFPFINPYSPVAALALS*APCSPW Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...TGCCACTGGTGAATAGGGATTAATGAATGGGAAGAGTTCAGTCAGACCAGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | AAATGTGTTCTACACCTTTGCCATCACCATCTGTACGTCCAGCATCGTCACTGGACGAGCCAGATGGCCTaGCTTGCCACAATTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KCVLHLCHHHLYVQHRHWTSQMA*LATIVA Trigger: TGCTACAATTGTGGCAAGCCAGGCCATCTGGCTCGT...CCAGTGACGATGCTGGACGTACAGATGGTGATGGCAAAGGTGTAGAACACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAACAGATCGTCCACACTTaGAGCATTCGTTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WEQPLSANLWPVKRIQRKQIVHT*SIRCCS Trigger: TGAGCAGCAACGAATGCTTCAAGTGTGGACGATCTG...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | AGCTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGTTGGTGCAGTCTTTTTaGATATGTCCAAATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLAWEQPLSANLWPVKRLVQSF*ICPNSP Trigger: TGGTGAATTTGGACATATTCAAAAAGACTGCACCAA...CCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCATTGTCTTGCTGCAATTaGTGGCTACATGACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHWDEAASVLGFEPDSLALSCCN*WLHDQF Trigger: AAACTGGTCATGTAGCCATCAATTGCAGCAAGACAA...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | GCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCAAACCCAGAAGGGCACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASRIGFTSYMGTHSNPEGHSGNS*LHLSCC Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...CCCTTCTGGGTTTGAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | GTTACTCGATGTTATTTAATAGCTACTGAGGTCAGACAATCCAAGGCCGTCATTCATTCCCGTGCAAGATaGCCTGACTCGCCACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTRCYLIATEVRQSKAVIHSRAR*PDSPQR Trigger: CCGCTGTGGCGAGTCAGGGCATCTTGCACGGGAATG...AATGACGGCCTTGGATTGTCTGACCTCAGTAGCTATTAAATAACATCGAGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCAGATTCCCTGGCATAGCCTTCAACACATTTGTCTTTTCAGTTTACTCGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQIPWHSLQHICLFSLLALALS*APCSPW Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...GAGTAAACTGAAAAGACAAATGTGTTGAAGGCTATGCCAGGGAATCTGGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCCAGTCACGAGCCAGATaGCCTGGCTTGCCACAATTG | + |
|
Preference number: 4 (lower is better) Translates to: WKLRCFQNWFYLLHGNTLQSRAR*PGLPQL Trigger: CAATTGTGGCAAGCCAGGCCATCTGGCTCGTGACTG...GAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTTGGTGCAGTCTTTTTaGATATGTCCAAATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LAWEQPLSANLWPVKRIQLVQSF*ICPNSP Trigger: TGGTGAATTTGGACATATTCAAAAAGACTGCACCAA...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCAAGCACTTCACCTTGGTaGAGTCTTTTTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHWDEAASVLGFEPDSLASTSPW*SLFEYV Trigger: GACATATTCAAAAAGACTGCACCAAGGTGAAGTGCT...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCAAACCCAGAAGGGGCAGATCACAATCCTTaGCAAGATGACCAGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASRIGFTSYMGTHSNPEGADHNP*QDDQTH Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTGC...CCCTTCTGGGTTTGAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGTATAGCACTTCACCTTaGTGCAGTCTTTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLAWEQPLSANLWPVKRYSTSP*CSLFEY Trigger: ATATTCAAAAAGACTGCACCAAGGTGAAGTGCTATA...CCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCAGATTCCCTGGCATAGCCTTCAACACATTTGTCTTTTCAGTTTACTCGACGAGGAAACAAACTaGAACCCTCTGCCGCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQIPWHSLQHICLFSLLDEETN*NPLPRL Trigger: AAGCCGCGGCAGAGGGTTCCAGTTTGTTTCCTCGTC...GAGTAAACTGAAAAGACAAATGTGTTGAAGGCTATGCCAGGGAATCTGGCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113619.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAACAATTGATGGCTACATaGCCAGTTTCACCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: WEQPLSANLWPVKRIQRKQLMAT*PVSPHL Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAATTG...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCCACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WKLRCFQNWFYLLHGNTLHSGNS*LHLSCC Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...GAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAGTTTACTCCCAACTCAACTGTATATTCTGAGGGCCTGATGCAGATGTTACTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQFTPNSTVYSEGLMQMLLSWAP*SPWQCG Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...TAACATCTGCATCAGGCCCTCAGAATATACAGTTGAGTTGGGAGTAAACTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCCCAGATGGCCTGGCTTaGCACAATTGTAGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WKLRCFQNWFYLLHGNTLPDGLA*HNCSSI Trigger: AATGCTGCTACAATTGTGGCAAGCCAGGCCATCTGG...GAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCAGATTCCCTGGCATAGCCTTCAACACATTTGTCTTTTCAGTTTACTCCAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSQIPWHSLQHICLFSLLQSLAM*PPLPQL Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...GAGTAAACTGAAAAGACAAATGTGTTGAAGGCTATGCCAGGGAATCTGGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTTTACTCCCAACTCAACTGTATATTCTGAGGGCCTGATGCAGATGTTAGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FQFTPNSTVYSEGLMQMLAPCSP*QCGHLY Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...TAACATCTGCATCAGGCCCTCAGAATATACAGTTGAGTTGGGAGTAAACTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | CGATGTTATTTAATAGCTACTGAGGTCAGACAATCCAAGGCCGTCATTATGCTATTCTGCTCATCCGCGTaGTCACAGTCACGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCYLIATEVRQSKAVIMLFCSSA*SQSRAR Trigger: TCTGGCTCGTGACTGTGACCACGCGGATGAGCAGAA...TAGCATAATGACGGCCTTGGATTGTCTGACCTCAGTAGCTATTAAATAACATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | GGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCTACCAAACCAGATCGTCCACACTTaGAGCATTCGTTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTERGFFNKALYITPLPNQIVHT*SIRCCS Trigger: TGAGCAGCAACGAATGCTTCAAGTGTGGACGATCTG...GTTTGGTAGAGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAATTGTCTTGCTGCAATTaGTGGCTACATGACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WEQPLSANLWPVKRIQRKLSCCN*WLHDQF Trigger: AAACTGGTCATGTAGCCATCAATTGCAGCAAGACAA...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | AATTATGCTAACTCTGAGCATCGGATGTTTACTCTGGGTTTTAGATTTAGTCTTCCGTGCAAGATGCCCTaGCTCGCCACAGCGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: NYANSEHRMFTLGFRFSLPCKMP*LATAVT Trigger: TGTTACCGCTGTGGCGAGTCAGGGCATCTTGCACGG...AAGACTAAATCTAAAACCCAGAGTAAACATCCGATGCTCAGAGTTAGCATAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | GGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCTACCAAACCCAGATGGCCTGGCTTaGCACAATTGTAGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GTERGFFNKALYITPLPNPDGLA*HNCSSI Trigger: AATGCTGCTACAATTGTGGCAAGCCAGGCCATCTGG...GTTTGGTAGAGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCGACGAGGAAACAAACTaGAACCCTCTATCCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WKLRCFQNWFYLLHGNTLDEETN*NPLSEV Trigger: TACCTCGGATAGAGGGTTCCAGTTTGTTTCCTCGTC...GAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
||
| CDS-3UTR CCA 90 bp | CGATGTTATTTAATAGCTACTGAGGTCAGACAATCCAAGGCCGTCATTATGCTAACGAGCCAGATGGCCTaGCTTGCCACAATTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RCYLIATEVRQSKAVIMLTSQMA*LATIVA Trigger: TGCTACAATTGTGGCAAGCCAGGCCATCTGGCTCGT...TAGCATAATGACGGCCTTGGATTGTCTGACCTCAGTAGCTATTAAATAACATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCATATAGCACTTCACCTTaGTGCAGTCTTTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TGLGTASICQPLASEEDSYSTSP*CSLFEY Trigger: ATATTCAAAAAGACTGCACCAAGGTGAAGTGCTATA...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGATATAGCACTTCACCTTaGTGCAGTCTTTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: AWEQPLSANLWPVKRIQRYSTSP*CSLFEY Trigger: ATATTCAAAAAGACTGCACCAAGGTGAAGTGCTATA...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | GCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCAAACCCAGAAGGGAGCACTTCACCTTGGTaGAGTCTTTTTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASRIGFTSYMGTHSNPEGSTSPW*SLFEYV Trigger: GACATATTCAAAAAGACTGCACCAAGGTGAAGTGCT...CCCTTCTGGGTTTGAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR GCA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAAAGCACTTCACCTTGGTaGAGTCTTTTTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: WEQPLSANLWPVKRIQRKSTSPW*SLFEYV Trigger: GACATATTCAAAAAGACTGCACCAAGGTGAAGTGCT...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | AAATGTGTTCTACACCTTTGCCATCACCATCTGTACGTCCAGCATCGTCACTGGAGCACTTCACCTTGGTaGAGTCTTTTTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KCVLHLCHHHLYVQHRHWSTSPW*SLFEYV Trigger: GACATATTCAAAAAGACTGCACCAAGGTGAAGTGCT...CCAGTGACGATGCTGGACGTACAGATGGTGATGGCAAAGGTGTAGAACACATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | AATTATGCTAACTCTGAGCATCGGATGTTTACTCTGGGTTTTAGATTTAGTCTTACTGGAACCCACCTCTaGCGCGGCTTCTCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NYANSEHRMFTLGFRFSLTGTHL*RGFSFH Trigger: GTGGAATGAGAAGCCGCGGCAGAGGTGGGTTCCAGT...AAGACTAAATCTAAAACCCAGAGTAAACATCCGATGCTCAGAGTTAGCATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | TTGAGCCAGATTCCCTGGCATAGCCTTCAACACATTTGTCTTTTCAGTTTACTCGCAGATCACAATCCTTaGCAAGATGACCAGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSQIPWHSLQHICLFSLLADHNP*QDDQTH Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTGC...GAGTAAACTGAAAAGACAAATGTGTTGAAGGCTATGCCAGGGAATCTGGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | GCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCAAACCCAGAAGGGTTGGTGCAGTCTTTTTaGATATGTCCAAATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASRIGFTSYMGTHSNPEGLVQSF*ICPNSP Trigger: TGGTGAATTTGGACATATTCAAAAAGACTGCACCAA...CCCTTCTGGGTTTGAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAATTGGTGCAGTCTTTTTaGATATGTCCAAATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WEQPLSANLWPVKRIQRKLVQSF*ICPNSP Trigger: TGGTGAATTTGGACATATTCAAAAAGACTGCACCAA...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR GCA 90 bp | ATTTATGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACCAGATGGCCTGGCTTaGCACAATTGTAGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IYGSLDASRIGFTSYMGTPDGLA*HNCSSI Trigger: AATGCTGCTACAATTGTGGCAAGCCAGGCCATCTGG...TGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | AATTATGCTAACTCTGAGCATCGGATGTTTACTCTGGGTTTTAGATTTAGTCTTCAGTCACGAGCCAGATaGCCTGGCTTGCCACAATTG | + |
|
Preference number: 4 (lower is better) Translates to: NYANSEHRMFTLGFRFSLQSRAR*PGLPQL Trigger: CAATTGTGGCAAGCCAGGCCATCTGGCTCGTGACTG...AAGACTAAATCTAAAACCCAGAGTAAACATCCGATGCTCAGAGTTAGCATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCGTCATTATGCTAAGAATTAAAGTTATTTATGGAAGCTTAGATGCTTCCTTCTGCTCATCCGCGTaGTCACAGTCACGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAVIMLRIKVIYGSLDASFCSSA*SQSRAR Trigger: TCTGGCTCGTGACTGTGACCACGCGGATGAGCAGAA...GGAAGCATCTAAGCTTCCATAAATAACTTTAATTCTTAGCATAATGACGGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | GTTACTCGATGTTATTTAATAGCTACTGAGGTCAGACAATCCAAGGCCGTCATTCAATTGATGGCTACATaGCCAGTTTCACCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: VTRCYLIATEVRQSKAVIQLMAT*PVSPHL Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAATTG...AATGACGGCCTTGGATTGTCTGACCTCAGTAGCTATTAAATAACATCGAGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR TCA 90 bp | TTGAGCCAGATTCCCTGGCATAGCCTTCAACACATTTGTCTTTTCAGTTTACTCTTGTCTTGCTGCAATTaGTGGCTACATGACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQIPWHSLQHICLFSLLLSCCN*WLHDQF Trigger: AAACTGGTCATGTAGCCATCAATTGCAGCAAGACAA...GAGTAAACTGAAAAGACAAATGTGTTGAAGGCTATGCCAGGGAATCTGGCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | ATTTATGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACAGCAGATCACAATCCTTaGCAAGATGACCAGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IYGSLDASRIGFTSYMGTADHNP*QDDQTH Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTGC...TGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR CCA 90 bp | AATTATGCTAACTCTGAGCATCGGATGTTTACTCTGGGTTTTAGATTTAGTCTTCAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NYANSEHRMFTLGFRFSLQSLAM*PPLPQL Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...AAGACTAAATCTAAAACCCAGAGTAAACATCCGATGCTCAGAGTTAGCATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CCA 90 bp | AAATGTGTTCTACACCTTTGCCATCACCATCTGTACGTCCAGCATCGTCACTGGTATAGCACTTCACCTTaGTGCAGTCTTTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: KCVLHLCHHHLYVQHRHWYSTSP*CSLFEY Trigger: ATATTCAAAAAGACTGCACCAAGGTGAAGTGCTATA...CCAGTGACGATGCTGGACGTACAGATGGTGATGGCAAAGGTGTAGAACACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| 3UTR CAA 72 bp | TGGAACTTTAGAGCAAGATTACCTCACATACCTCACTaGCTGAGTTTTGAAATTAAGGGCACACACAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WNFRARLPHIPH*LSFEIKGTHNH Trigger: GTGGTTGTGTGTGCCCTTAATTTCAAAACTCAGCAAGTGAGGTATGTGAGGTAATCTTGCTCTAAAGTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
||
| CDS-3UTR CCA 90 bp | GGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCTACCAAACTATAGCACTTCACCTTaGTGCAGTCTTTTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: GTERGFFNKALYITPLPNYSTSP*CSLFEY Trigger: ATATTCAAAAAGACTGCACCAAGGTGAAGTGCTATA...GTTTGGTAGAGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | AAGGCCGTCATTATGCTAAGAATTAAAGTTATTTATGGAAGCTTAGATGCTTCCTTGTCTTGCTGCAATTaGTGGCTACATGACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KAVIMLRIKVIYGSLDASLSCCN*WLHDQF Trigger: AAACTGGTCATGTAGCCATCAATTGCAGCAAGACAA...GGAAGCATCTAAGCTTCCATAAATAACTTTAATTCTTAGCATAATGACGGCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS-3UTR TCA 90 bp | AATTATGCTAACTCTGAGCATCGGATGTTTACTCTGGGTTTTAGATTTAGTCTTTTGTCTTGCTGCAATTaGTGGCTACATGACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NYANSEHRMFTLGFRFSLLSCCN*WLHDQF Trigger: AAACTGGTCATGTAGCCATCAATTGCAGCAAGACAA...AAGACTAAATCTAAAACCCAGAGTAAACATCCGATGCTCAGAGTTAGCATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| 3UTR CAA 72 bp | ACAATCCAAGGCCATCATTATGCTAAGAATGTTCTTTaGTTCATGTGTCTAAGCACAACTGTGGATTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TIQGHHYAKNVL*FMCLSTTVDSV Trigger: AACTGAATCCACAGTTGTGCTTAGACACATGAACAAAAGAACATTCTTAGCATAATGATGGCCTTGGATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
||
| CDS-3UTR TCA 90 bp | AATTATGCTAACTCTGAGCATCGGATGTTTACTCTGGGTTTTAGATTTAGTCTTTTGGTGCAGTCTTTTTaGATATGTCCAAATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NYANSEHRMFTLGFRFSLLVQSF*ICPNSP Trigger: TGGTGAATTTGGACATATTCAAAAAGACTGCACCAA...AAGACTAAATCTAAAACCCAGAGTAAACATCCGATGCTCAGAGTTAGCATAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS GCA 90 bp | TCTGCTCATCCGCGTGGTCACAGTCACGAGCCAGATGGCCTGGCTTaGCACAATTGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAHPRGHSHEPDGLA*HNCSSIALALSWAP Trigger: AGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGTGGCAAGCCAGGCCATCTGGCTCGTGACTGTGACCACGCGGATGAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
||
| CDS CCA 90 bp | GGCCTGGCTTGCCACAATTGTAGCAGCATTGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGGCAATGTGGCCACCTCTACCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLACHNCSSIALALS*APCSPWQCGHLYRS Trigger: ACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGTGGCAAGCCAGGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | CTCACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA | + |
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Preference number: 5 (lower is better) Translates to: LTGLGTASICQPLASEEDGSLQS*AMWPPL Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...ATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS CCA 90 bp | TGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTACCGCAGTTATAGCAGGCATCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: CSSIALALSWAPCSP*QCGHLYRSYSRHPP Trigger: AGGAGGATGCCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | ACTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA | + |
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Preference number: 5 (lower is better) Translates to: TGLGTASICQPLASEEDSGSLQS*AMWPPL Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS GCA 90 bp | TGCCACAATTGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGCCACCTCTACCGCAGTTATAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CHNCSSIALALSWAP*SPWQCGHLYRSYSR Trigger: CCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS CCA 90 bp | TGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTACCGCAGTTATAGCAGGCTTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: CSSIALALSWAPCSP*QCGHLYRSYSRLHP Trigger: AGGATGAAGCCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032138.15 |
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| CDS-3UTR CAA 90 bp | CGTCACTGGGATGAAGCTGCTTCTGTGTTAGGCTTTGAGCCAGATTCCCTGGCACCAGATCGTCCACACTaGAAGCATTCGTTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RHWDEAASVLGFEPDSLAPDRPH*KHSLLL Trigger: GAGCAGCAACGAATGCTTCAAGTGTGGACGATCTGG...TGCCAGGGAATCTGGCTCAAAGCCTAACACAGAAGCAGCTTCATCCCAGTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | CTGGCCTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGACAATTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: LAWEQPLSANLWPVKRIQTIVAA*LSLSLG Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGT...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAACCAGATCGTCCACACTaGAAGCATTCGTTGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: WEQPLSANLWPVKRIQRKPDRPH*KHSLLL Trigger: GAGCAGCAACGAATGCTTCAAGTGTGGACGATCTGG...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | TGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACACACTCCCAGATCGTCCACACTaGAAGCATTCGTTGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: WKLRCFQNWFYLLHGNTLPDRPH*KHSLLL Trigger: GAGCAGCAACGAATGCTTCAAGTGTGGACGATCTGG...GAGTGTGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGTTTACTCCCAACTCAACTGTATATTCTGAGGGCCTGATGCAGATGTTAGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA | + |
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Preference number: 5 (lower is better) Translates to: FQFTPNSTVYSEGLMQMLGSLQS*AMWPPL Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...TAACATCTGCATCAGGCCCTCAGAATATACAGTTGAGTTGGGAGTAAACTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | CTGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAATTGACTTCACTTGTCTaGCTGCAATTGATGGCTACA | + |
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Preference number: 5 (lower is better) Translates to: LGTASICQPLASEEDSEKLTSLV*LQLMAT Trigger: TGTAGCCATCAATTGCAGCAAGACAAGTGAAGTCAA...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | AAATGTGTTCTACACCTTTGCCATCACCATCTGTACGTCCAGCATCGTCACTGGTTGACTTCACTTGTCTaGCTGCAATTGATGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: KCVLHLCHHHLYVQHRHWLTSLV*LQLMAT Trigger: TGTAGCCATCAATTGCAGCAAGACAAGTGAAGTCAA...CCAGTGACGATGCTGGACGTACAGATGGTGATGGCAAAGGTGTAGAACACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | TGGGAACAGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAATTGACTTCACTTGTCTaGCTGCAATTGATGGCTACA | + |
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Preference number: 5 (lower is better) Translates to: WEQPLSANLWPVKRIQRKLTSLV*LQLMAT Trigger: TGTAGCCATCAATTGCAGCAAGACAAGTGAAGTCAA...TTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCTGTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | TTTTTCCATCTCTACATAGATTCTGGAACTAAAAACTCAAGCCACCAAGCTTATGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA | + |
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Preference number: 5 (lower is better) Translates to: FFHLYIDSGTKNSSHQAYGSLQS*AMWPPL Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...ATAAGCTTGGTGGCTTGAGTTTTTAGTTCCAGAATCTATGTAGAGATGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
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| CDS-3UTR CAA 90 bp | GTTACTCGATGTTATTTAATAGCTACTGAGGTCAGACAATCCAAGGCCGTCATTACAATTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: VTRCYLIATEVRQSKAVITIVAA*LSLSLG Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGT...AATGACGGCCTTGGATTGTCTGACCTCAGTAGCTATTAAATAACATCGAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | CGATGTTATTTAATAGCTACTGAGGTCAGACAATCCAAGGCCGTCATTATGCTAACAATTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RCYLIATEVRQSKAVIMLTIVAA*LSLSLG Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGT...TAGCATAATGACGGCCTTGGATTGTCTGACCTCAGTAGCTATTAAATAACATCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | ATTTATGGAAGCTTAGATGCTTCCAGAATTGGTTTTACCTCCTACATGGGAACAACAATTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: IYGSLDASRIGFTSYMGTTIVAA*LSLSLG Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGT...TGTTCCCATGTAGGAGGTAAAACCAATTCTGGAAGCATCTAAGCTTCCATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | CTTACTGGTCTGACTGAACTCTTCCCATTCATTAATCCCTATTCACCAGTGGCATTGACTTCACTTGTCTaGCTGCAATTGATGGCTACA | + |
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Preference number: 5 (lower is better) Translates to: LTGLTELFPFINPYSPVALTSLV*LQLMAT Trigger: TGTAGCCATCAATTGCAGCAAGACAAGTGAAGTCAA...TGCCACTGGTGAATAGGGATTAATGAATGGGAAGAGTTCAGTCAGACCAGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | AAGGCCGTCATTATGCTAAGAATTAAAGTTATTTATGGAAGCTTAGATGCTTCCCCAGATCGTCCACACTaGAAGCATTCGTTGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: KAVIMLRIKVIYGSLDASPDRPH*KHSLLL Trigger: GAGCAGCAACGAATGCTTCAAGTGTGGACGATCTGG...GGAAGCATCTAAGCTTCCATAAATAACTTTAATTCTTAGCATAATGACGGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS-3UTR CAA 90 bp | TTTTTCCATCTCTACATAGATTCTGGAACTAAAAACTCAAGCCACCAAGCTTATCCAGATCGTCCACACTaGAAGCATTCGTTGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: FFHLYIDSGTKNSSHQAYPDRPH*KHSLLL Trigger: GAGCAGCAACGAATGCTTCAAGTGTGGACGATCTGG...ATAAGCTTGGTGGCTTGAGTTTTTAGTTCCAGAATCTATGTAGAGATGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032138.15 ENSMUST00000204653.3 |
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| CDS-3UTR CAA 90 bp | GGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCTACCAAACTTGACTTCACTTGTCTaGCTGCAATTGATGGCTACA | + |
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Preference number: 5 (lower is better) Translates to: GTERGFFNKALYITPLPNLTSLV*LQLMAT Trigger: TGTAGCCATCAATTGCAGCAAGACAAGTGAAGTCAA...GTTTGGTAGAGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032138.15 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS GCA 72 bp | CCGCGTGGTCACAGTCACGAGCCAGATGGCCTGGCTTaGCACAATTGTAGCAGCATTGCTCTCGCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PRGHSHEPDGLA*HNCSSIALALS Trigger: AGAGAGAGCGAGAGCAATGCTGCTACAATTGTGGCAAGCCAGGCCATCTGGCTCGTGACTGTGACCACGCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS GCA 72 bp | TGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGCCACCTCTACCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: CSSIALALSWAP*SPWQCGHLYRS Trigger: ACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS CCA 72 bp | ATTGCTCTCGCTCTCTCTTGGGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTACCGCAGTTATAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: IALALSWAPCSP*QCGHLYRSYSR Trigger: CCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS CCA 72 bp | TGCCACAATTGTAGCAGCATTGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGGCAATGTGGCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: CHNCSSIALALS*APCSPWQCGHL Trigger: GAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGTGGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS CAA 72 bp | AGCCAGATGGCCTGGCTTGCCACAATTGTAGCAGCATaGCTCTCGCTCTCTCTTGGGCTCCTTGCAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SQMAWLATIVAA*LSLSLGLLAVL Trigger: AAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAATTGTGGCAAGCCAGGCCATCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS TCA 72 bp | TGTAGCCTCAATTGTGCATTCCCGTGCAAGATGCCCTaGCTCGCCACAGCGGTAACAGTTGACTTCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: CSLNCAFPCKMP*LATAVTVDFTC Trigger: ACAAGTGAAGTCAACTGTTACCGCTGTGGCGAGTCAGGGCATCTTGCACGGGAATGCACAATTGAGGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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| CDS CAA 90 bp | ACCAGTTTCACCACACCTATAGCACTTCACCTTGGTGCAGTCTTTTaGAATATGTCCAAATTCACCACAAGAATAGCACTTCTGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: TSFTTPIALHLGAVF*NMSKFTTRIALLLI Trigger: GATGAGCAGAAGTGCTATTCTTGTGGTGAATTTGGACATATTCAAAAAGACTGCACCAAGGTGAAGTGCTATAGGTGTGGTGAAACTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032138.15 ENSMUST00000113617.3 ENSMUST00000113619.8 ENSMUST00000204653.3 ENSMUST00000204890.3 |
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