Pregenerated sensors for CNBD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038085Ensembl transcript IDs: ENSMUST00000037096.9, ENSMUST00000073942.12, ENSMUST00000109580.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCACCCCTGTGCAGCAGTGTTGGGTGAGGGTCCAGGAAAGCACTaGTCCCATCCTCGTCCTCAGTTATGGCCACTGTGCCCAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SHPCAAVLGEGPGKH*SHPRPQLWPLCPGR Trigger: TCTACCTGGGCACAGTGGCCATAACTGAGGACGAGGATGGGAGCAGTGCTTTCCTGGACCCTCACCCAACACTGCTGCACAGGGGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS TCA 90 bp | ATCCGAATCGTGGTCTCGCTGATCCTTGGGAGGGTCTCCTCAGATTaGTTGACCACCCACCTCGGGGGTCTTTCACCAGGACAGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: IRIVVSLILGRVSSD*LTTHLGGLSPGQPG Trigger: CCCTGGCTGTCCTGGTGAAAGACCCCCGAGGTGGGTGGTCAATCAATCTGAGGAGACCCTCCCAAGGATCAGCGAGACCACGATTCGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073942.12 |
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| CDS CCA 90 bp | CTCTGTCGACCACCAGGAACTCTGTCTCCTCCATGCAGACCACCGTaGCACTCCTTACTGTGGTGCTTAGAAGGCCCATTTCCCCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LCRPPGTLSPPCRPP*HSLLWCLEGPFPRR Trigger: CCTTCGGGGAAATGGGCCTTCTAAGCACCACAGTAAGGAGTGCCACGGTGGTCTGCATGGAGGAGACAGAGTTCCTGGTGGTCGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS GCA 90 bp | GATCCAGCAGCTCCAGTTGCTGCCAGACCCACTTGTAATAGGCACTaGAGTCGCCCAGGGCTACCAATCGCAGGATTTCACAGTTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: DPAAPVAARPTCNRH*SRPGLPIAGFHSCP Trigger: AGGGCAACTGTGAAATCCTGCGATTGGTAGCCCTGGGCGACTGCAGTGCCTATTACAAGTGGGTCTGGCAGCAACTGGAGCTGCTGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS CCA 90 bp | CTCAGATTTCGACTCTGTCGTGTCCGACTTGTCCGCCGGCTCCAATaGGGACCTTGCAGTGCCGCCATCCTTAGTGTCAGTAGAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: LRFRLCRVRLVRRLQ*GPCSAAILSVSRAD Trigger: ATCAGCTCTACTGACACTAAGGATGGCGGCACTGCAAGGTCCCCATTGGAGCCGGCGGACAAGTCGGACACGACAGAGTCGAAATCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037096.9 |
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| CDS GCA 90 bp | CAACGAAATCCTCTCTGTCGACCACCAGGAACTCTGTCTCCTCCATaGAGACCACCGTGGCACTCCTTACTGTGGTGCTTAGAAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: QRNPLCRPPGTLSPP*RPPWHSLLWCLEGP Trigger: TGGGCCTTCTAAGCACCACAGTAAGGAGTGCCACGGTGGTCTGCATGGAGGAGACAGAGTTCCTGGTGGTCGACAGAGAGGATTTCGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS TCA 90 bp | ATGAAGGGCCGGCAATCTCGCTGGATTTCCGGGACAAAGGCCTGGTaGAGGCCCACAATCTCTCCTTCCTCTGTCTTGTGGATCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: MKGRQSRWISGTKAW*RPTISPSSVLWIFM Trigger: CATGAAGATCCACAAGACAGAGGAAGGAGAGATTGTGGGCCTTCACCAGGCCTTTGTCCCGGAAATCCAGCGAGATTGCCGGCCCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS TCA 90 bp | CAGGATGGCTTCTTCTGTGTGATAGAAATGGCCCTCGGAGGGAAGTaGCCCTCCTGTGCAGCAAAGTCCTCGGTAACAAACGAGATACGG | + |
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Preference number: 5 (lower is better) Translates to: QDGFFCVIEMALGGK*PSCAAKSSVTNEIR Trigger: CCGTATCTCGTTTGTTACCGAGGACTTTGCTGCACAGGAGGGTCACTTCCCTCCGAGGGCCATTTCTATCACACAGAAGAAGCCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 |
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| CDS GCA 90 bp | CTTCTGTGTGATAGAAATGGCCCTCGGAGGGAAGTGACCCTCCTGTaGAGCAAAGTCCTCGGTAACAAACGAGATACGGCCTTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LLCDRNGPRREVTLL*SKVLGNKRDTALLL Trigger: AAGAAGCAAGGCCGTATCTCGTTTGTTACCGAGGACTTTGCTGCACAGGAGGGTCACTTCCCTCCGAGGGCCATTTCTATCACACAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 |
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| CDS CCA 90 bp | CCCAGCAACTTGGGGAGAGTGTTTTCTACTTTGTTGATCTTGCCGTaGAAGTCTATTCCCTGTTGCTCTCTGGCTTTCTGGAGACGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PSNLGRVFSTLLILP*KSIPCCSLAFWRRR Trigger: TCTGCGTCTCCAGAAAGCCAGAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACTCTCCCCAAGTTGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS GCA 90 bp | GTACCGATACTGAGTTTCCTTCTGAACTTCGTCACCCAGCTTATTTaGAACGAAATCCTCTCTGTCGACCACCAGGAACTCTGTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: VPILSFLLNFVTQLI*NEILSVDHQELCLL Trigger: GAGGAGACAGAGTTCCTGGTGGTCGACAGAGAGGATTTCGTTGCAAATAAGCTGGGTGACGAAGTTCAGAAGGAAACTCAGTATCGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS TCA 90 bp | GATGAATGCCGAATTCATAAAGTCTTTAGACACCATCTGTCCGTATaGGAACCTCTCTATCCTCCCCAAGGCCACCAGCTTCCAGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: DECRIHKVFRHHLSV*EPLYPPQGHQLPEL Trigger: AAGCTCTGGAAGCTGGTGGCCTTGGGGAGGATAGAGAGGTTCTCATACGGACAGATGGTGTCTAAAGACTTTATGAATTCGGCATTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS TCA 90 bp | GTCAACCATGTCATAAAACTTCTCTTTTCTTACTTGTATCAACTCTaGTCCCAAACTCAGAAGGATGAAGGGCCGGCAATCTCGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: VNHVIKLLFSYLYQL*SQTQKDEGPAISLD Trigger: ATCCAGCGAGATTGCCGGCCCTTCATCCTTCTGAGTTTGGGATCAGAGTTGATACAAGTAAGAAAAGAGAAGTTTTATGACATGGTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CCA 90 bp | TATAGTCGTTTTCCTTCAGGAAACTCTGGCACAGGTCTTCATCGCTaGGATAGTCCACATCCATCTTTATTATCTTTGCTCTTGTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: YSRFPSGNSGTGLHR*DSPHPSLLSLLLSP Trigger: AGGAGACAAGAGCAAAGATAATAAAGATGGATGTGGACTATCCCAGCGATGAAGACCTGTGCCAGAGTTTCCTGAAGGAAAACGACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS GCA 72 bp | CCTCCATGCAGACCACCGTGGCACTCCTTACTGTGGTaGTTAGAAGGCCCATTTCCCCGAAGGAGCCACCCC | + |
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Preference number: 6 (lower is better) Translates to: PPCRPPWHSLLW*LEGPFPRRSHP Trigger: GGGGTGGCTCCTTCGGGGAAATGGGCCTTCTAAGCACCACAGTAAGGAGTGCCACGGTGGTCTGCATGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS CCA 72 bp | CGACTCTGTCGTGTCCGACTTGTCCGCCGGCTCCAATaGGGACCTTGCAGTGCCGCCATCCTTAGTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: RLCRVRLVRRLQ*GPCSAAILSVS Trigger: ACTGACACTAAGGATGGCGGCACTGCAAGGTCCCCATTGGAGCCGGCGGACAAGTCGGACACGACAGAGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037096.9 |
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| CDS CCA 72 bp | CATTTCCCCGAAGGAGCCACCCCTGTGCAGCAGTGTTaGGTGAGGGTCCAGGAAAGCACTGCTCCCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: HFPEGATPVQQC*VRVQESTAPIL Trigger: GAGGATGGGAGCAGTGCTTTCCTGGACCCTCACCCAACACTGCTGCACAGGGGTGGCTCCTTCGGGGAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS CAA 72 bp | CGTGGTCTCGCTGATCCTTGGGAGGGTCTCCTCAGATaGATTGACCACCCACCTCGGGGGTCTTTCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: RGLADPWEGLLR*IDHPPRGSFTR Trigger: CCTGGTGAAAGACCCCCGAGGTGGGTGGTCAATCAATCTGAGGAGACCCTCCCAAGGATCAGCGAGACCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073942.12 |
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| CDS CAA 90 bp | CATCCGAATCGTGGTCTCGCTGATCCTTGGGAGGGTCTCCTCAGATaGATTGACCACCCACCTCGGGGGTCTTTCACCAGGACAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: HPNRGLADPWEGLLR*IDHPPRGSFTRTAR Trigger: CCTGGCTGTCCTGGTGAAAGACCCCCGAGGTGGGTGGTCAATCAATCTGAGGAGACCCTCCCAAGGATCAGCGAGACCACGATTCGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073942.12 |
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| CDS TCA 72 bp | GTGGTCTCGCTGATCCTTGGGAGGGTCTCCTCAGATTaGTTGACCACCCACCTCGGGGGTCTTTCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VVSLILGRVSSD*LTTHLGGLSPG Trigger: TCCTGGTGAAAGACCCCCGAGGTGGGTGGTCAATCAATCTGAGGAGACCCTCCCAAGGATCAGCGAGACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073942.12 |
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| CDS CCA 72 bp | TCTCCTCCATGCAGACCACCGTGGCACTCCTTACTGTaGTGCTTAGAAGGCCCATTTCCCCGAAGGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SPPCRPPWHSLL*CLEGPFPRRSH Trigger: GTGGCTCCTTCGGGGAAATGGGCCTTCTAAGCACCACAGTAAGGAGTGCCACGGTGGTCTGCATGGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS TCA 72 bp | CGGCAATCTCGCTGGATTTCCGGGACAAAGGCCTGGTaGAGGCCCACAATCTCTCCTTCCTCTGTCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: RQSRWISGTKAW*RPTISPSSVLW Trigger: CCACAAGACAGAGGAAGGAGAGATTGTGGGCCTTCACCAGGCCTTTGTCCCGGAAATCCAGCGAGATTGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS GCA 72 bp | CCTCTCTGTCGACCACCAGGAACTCTGTCTCCTCCATaGAGACCACCGTGGCACTCCTTACTGTGGTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: PLCRPPGTLSPP*RPPWHSLLWCL Trigger: TAAGCACCACAGTAAGGAGTGCCACGGTGGTCTGCATGGAGGAGACAGAGTTCCTGGTGGTCGACAGAGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS CCA 72 bp | GCAGAGGTCTTGGATCTCCTGGTGGGTCCTCCAGGATaGCTTCTTCTGTGTGATAGAAATGGCCCTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: AEVLDLLVGPPG*LLLCDRNGPRR Trigger: CCTCCGAGGGCCATTTCTATCACACAGAAGAAGCCATCCTGGAGGACCCACCAGGAGATCCAAGACCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 |
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| CDS CCA 72 bp | GCAGAGGTCTTGGATCTCCTGGTGGGTCCTCCAGGATaGCTTCTTCTCCTGTGCAGCAAAGTCCTCGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: AEVLDLLVGPPG*LLLLCSKVLGN Trigger: GTTACCGAGGACTTTGCTGCACAGGAGAAGAAGCCATCCTGGAGGACCCACCAGGAGATCCAAGACCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109580.2 |
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| CDS GCA 72 bp | GATAGAAATGGCCCTCGGAGGGAAGTGACCCTCCTGTaGAGCAAAGTCCTCGGTAACAAACGAGATACGGCC | + |
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Preference number: 6 (lower is better) Translates to: DRNGPRREVTLL*SKVLGNKRDTA Trigger: GGCCGTATCTCGTTTGTTACCGAGGACTTTGCTGCACAGGAGGGTCACTTCCCTCCGAGGGCCATTTCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 |
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| CDS CCA 72 bp | CCACCAGGAACTCTGTCTCCTCCATGCAGACCACCGTaGCACTCCTTACTGTGGTGCTTAGAAGGCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: PPGTLSPPCRPP*HSLLWCLEGPF Trigger: AAATGGGCCTTCTAAGCACCACAGTAAGGAGTGCCACGGTGGTCTGCATGGAGGAGACAGAGTTCCTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | CCCATTGTCATGAATTCTCAGAGGTTTGTGATCCAGCAGCTCCAGTaGCTGCCAGACCCACTTGTAATAGGCACTGCAGTCGCCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PIVMNSQRFVIQQLQ*LPDPLVIGTAVAQG Trigger: GCCCTGGGCGACTGCAGTGCCTATTACAAGTGGGTCTGGCAGCAACTGGAGCTGCTGGATCACAAACCTCTGAGAATTCATGACAATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073942.12 |
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| CDS CAA 72 bp | TCCGCCTTTATCTCCTTAATCGAGGCCGGACTCTCCTaGTCTTCCTCTGATCTGGAATCCGATCCCGACTCA | + |
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Preference number: 6 (lower is better) Translates to: SAFISLIEAGLS*SSSDLESDPDS Trigger: TGAGTCGGGATCGGATTCCAGATCAGAGGAAGACAAGGAGAGTCCGGCCTCGATTAAGGAGATAAAGGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037096.9 |
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| CDS CAA 90 bp | TTCATTGTCATGAATTCTCAGAGGTTTGTGATCCAGCAGCTCCAGTaGCTGCCAGACCCACTTGTAATAGGCACTGCAGTCGCCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: FIVMNSQRFVIQQLQ*LPDPLVIGTAVAQG Trigger: GCCCTGGGCGACTGCAGTGCCTATTACAAGTGGGTCTGGCAGCAACTGGAGCTGCTGGATCACAAACCTCTGAGAATTCATGACAATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS TCA 72 bp | GGCCCAGCAACTTGGGGAGAGTGTTTTCTACTTTGTTaGTCTTGCCGTGGAAGTCTATTCCCTGTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GPATWGECFLLC*SCRGSLFPVAL Trigger: GAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACTCTCCCCAAGTTGCTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 72 bp | ATGAATTCTCAGAGGTTTGTGATCCAGCAGCTCCAGTaGCTGCCAGACCCACTTGTAATAGGCACTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: MNSQRFVIQQLQ*LPDPLVIGTAV Trigger: GACTGCAGTGCCTATTACAAGTGGGTCTGGCAGCAACTGGAGCTGCTGGATCACAAACCTCTGAGAATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS CAA 72 bp | GGGCCCAGCAACTTGGGGAGAGTGTTTTCTACTTTGTaGATCTTGCCGTGGAAGTCTATTCCCTGTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GPSNLGRVFSTL*ILPWKSIPCCS Trigger: AGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACTCTCCCCAAGTTGCTGGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 72 bp | TTCTTCTTGGTCTGGACTGGGATGAATGGTGACTTATaGAGGGGCTCCACCAGTAACCGCAGCAAATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FFLVWTGMNGDL*RGSTSNRSKSF Trigger: GAAGGATTTGCTGCGGTTACTGGTGGAGCCCCTCAATAAGTCACCATTCATCCCAGTCCAGACCAAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | ACCCTCCTGTGCAGCAAAGTCCTCGGTAACAAACGAGATACGGCCTaGCTTCTTTTTATCCCAGAAGGAGAAGTCAGGATGCTTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TLLCSKVLGNKRDTA*LLFIPEGEVRMLLV Trigger: CACAAGAAGCATCCTGACTTCTCCTTCTGGGATAAAAAGAAGCAAGGCCGTATCTCGTTTGTTACCGAGGACTTTGCTGCACAGGAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 |
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| CDS CAA 90 bp | TTTGGGCCCAGCAACTTGGGGAGAGTGTTTTCTACTTTGTTGATCTaGCCGTGGAAGTCTATTCCCTGTTGCTCTCTGGCTTTCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FGPSNLGRVFSTLLI*PWKSIPCCSLAFWR Trigger: TCTCCAGAAAGCCAGAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACTCTCCCCAAGTTGCTGGGCCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CCA 72 bp | CCGTGGAAGTCTATTCCCTGTTGCTCTCTGGCTTTCTaGAGACGCAGAAGTTTCAAATACGTGAAATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PWKSIPCCSLAF*RRRSFKYVKSC Trigger: GCAGGATTTCACGTATTTGAAACTTCTGCGTCTCCAGAAAGCCAGAGAGCAACAGGGAATAGACTTCCACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 72 bp | TTTGGGCCCAGCAACTTGGGGAGAGTGTTTTCTACTTaGTTGATCTTGCCGTGGAAGTCTATTCCCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: FGPSNLGRVFST*LILPWKSIPCC Trigger: GCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACTCTCCCCAAGTTGCTGGGCCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | TGTACCGATACTGAGTTTCCTTCTGAACTTCGTCACCCAGCTTATTaGCAACGAAATCCTCTCTGTCGACCACCAGGAACTCTGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CTDTEFPSELRHPAY*QRNPLCRPPGTLSP Trigger: AGGAGACAGAGTTCCTGGTGGTCGACAGAGAGGATTTCGTTGCAAATAAGCTGGGTGACGAAGTTCAGAAGGAAACTCAGTATCGGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | TTGATCTTTGGGCCCAGCAACTTGGGGAGAGTGTTTTCTACTTTGTaGATCTTGCCGTGGAAGTCTATTCCCTGTTGCTCTCTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LIFGPSNLGRVFSTL*ILPWKSIPCCSLAF Trigger: GAAAGCCAGAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACTCTCCCCAAGTTGCTGGGCCCAAAGATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | GATTTGATCTTTGGGCCCAGCAACTTGGGGAGAGTGTTTTCTACTTaGTTGATCTTGCCGTGGAAGTCTATTCCCTGTTGCTCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: DLIFGPSNLGRVFST*LILPWKSIPCCSLA Trigger: AGCCAGAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACTCTCCCCAAGTTGCTGGGCCCAAAGATCAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | CTTCTCCTGTGCAGCAAAGTCCTCGGTAACAAACGAGATACGGCCTaGCTTCTTTTTATCCCAGAAGGAGAAGTCAGGATGCTTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: LLLCSKVLGNKRDTA*LLFIPEGEVRMLLV Trigger: CACAAGAAGCATCCTGACTTCTCCTTCTGGGATAAAAAGAAGCAAGGCCGTATCTCGTTTGTTACCGAGGACTTTGCTGCACAGGAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109580.2 |
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| CDS TCA 72 bp | CGAATTCATAAAGTCTTTAGACACCATCTGTCCGTATaGGAACCTCTCTATCCTCCCCAAGGCCACCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RIHKVFRHHLSV*EPLYPPQGHQL Trigger: AAGCTGGTGGCCTTGGGGAGGATAGAGAGGTTCTCATACGGACAGATGGTGTCTAAAGACTTTATGAATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037096.9 ENSMUST00000073942.12 ENSMUST00000109580.2 |
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| CDS CCA 72 bp | TTGGGGAGAGTGTTTTCTACTTTGTTGATCTTGCCGTaGAAGTCTATTCCCTGTTGCTCTCTGGCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LGRVFSTLLILP*KSIPCCSLAFW Trigger: CCAGAAAGCCAGAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACTCTCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS GCA 72 bp | ACTTTGTTGATCTTGCCGTGGAAGTCTATTCCCTGTTaGTCTCTGGCTTTCTGGAGACGCAGAAGTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TLLILPWKSIPC*SLAFWRRRSFK Trigger: TTTGAAACTTCTGCGTCTCCAGAAAGCCAGAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 72 bp | CTCAATGATCTGATATTCCCGAAATCCCCTGAGGCCTaGACGGAACATCTTACACACTCGGTTCATCATGAT | + |
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Preference number: 6 (lower is better) Translates to: LNDLIFPKSPEA*TEHLTHSVHHD Trigger: ATCATGATGAACCGAGTGTGTAAGATGTTCCGTCAAGGCCTCAGGGGATTTCGGGAATATCAGATCATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037096.9 |
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| CDS CAA 72 bp | TACTTTGTTGATCTTGCCGTGGAAGTCTATTCCCTGTaGCTCTCTGGCTTTCTGGAGACGCAGAAGTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: YFVDLAVEVYSL*LSGFLETQKFQ Trigger: TTGAAACTTCTGCGTCTCCAGAAAGCCAGAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS GCA 72 bp | AAATGGGATAGTGCTGCTTCACCTTCTTTTCAAGGCTaGACAGATCCAGGAACAAAGACTTGTGGTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: KWDSAASPSFQG*TDPGTKTCGCR Trigger: TCTACAACCACAAGTCTTTGTTCCTGGATCTGTGCAGCCTTGAAAAGAAGGTGAAGCAGCACTATCCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | AGTGTTTTCTACTTTGTTGATCTTGCCGTGGAAGTCTATTCCCTGTaGCTCTCTGGCTTTCTGGAGACGCAGAAGTTTCAAATACGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SVFYFVDLAVEVYSL*LSGFLETQKFQIRE Trigger: TTCACGTATTTGAAACTTCTGCGTCTCCAGAAAGCCAGAGAGCAACAGGGAATAGACTTCCACGGCAAGATCAACAAAGTAGAAAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS TCA 72 bp | GTCATAAAACTTCTCTTTTCTTACTTGTATCAACTCTaGTCCCAAACTCAGAAGGATGAAGGGCCGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: VIKLLFSYLYQL*SQTQKDEGPAI Trigger: GATTGCCGGCCCTTCATCCTTCTGAGTTTGGGATCAGAGTTGATACAAGTAAGAAAAGAGAAGTTTTATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 72 bp | CATCGCTGGGATAGTCCACATCCATCTTTATTATCTTaGCTCTTGTCTCCTCGTCAACCATGTCATAAAACT | + |
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Preference number: 6 (lower is better) Translates to: HRWDSPHPSLLS*LLSPRQPCHKT Trigger: AGTTTTATGACATGGTTGACGAGGAGACAAGAGCAAAGATAATAAAGATGGATGTGGACTATCCCAGCGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | ACAGGTCTTCATCGCTGGGATAGTCCACATCCATCTTTATTATCTTaGCTCTTGTCTCCTCGTCAACCATGTCATAAAACTTCTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TGLHRWDSPHPSLLS*LLSPRQPCHKTSLF Trigger: GAAAAGAGAAGTTTTATGACATGGTTGACGAGGAGACAAGAGCAAAGATAATAAAGATGGATGTGGACTATCCCAGCGATGAAGACCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 90 bp | CTTCATCGCTGGGATAGTCCACATCCATCTTTATTATCTTTGCTCTaGTCTCCTCGTCAACCATGTCATAAAACTTCTCTTTTCTTACTT | + |
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Preference number: 6 (lower is better) Translates to: LHRWDSPHPSLLSLL*SPRQPCHKTSLFLL Trigger: AAGTAAGAAAAGAGAAGTTTTATGACATGGTTGACGAGGAGACAAGAGCAAAGATAATAAAGATGGATGTGGACTATCCCAGCGATGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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| CDS CAA 72 bp | TGGGATAGTCCACATCCATCTTTATTATCTTTGCTCTaGTCTCCTCGTCAACCATGTCATAAAACTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: WDSPHPSLLSLL*SPRQPCHKTSL Trigger: AAGAGAAGTTTTATGACATGGTTGACGAGGAGACAAGAGCAAAGATAATAAAGATGGATGTGGACTATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037096.9 ENSMUST00000109580.2 |
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