RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CMYA5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047419

Ensembl transcript IDs: ENSMUST00000062122.4

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTaGTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGG +
Preference number: 1 (lower is better)
Translates to: PSTHTLLHEARGPWL*SHADCGTRSSRQCR
Trigger: CCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
3UTR CCA 90 bp TTCCGCCCCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTaGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAG +
Preference number: 1 (lower is better)
Translates to: FRPSTHTLLHEARGP*LCSHADCGTRSSRQ
Trigger: CTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGGGGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTaGCTGAGAGACAGAATGATAGGTCTGACCCCCAACTCTTGCTCA +
Preference number: 1 (lower is better)
Translates to: SRQCRCVGDYLNNAH*LRDRMIGLTPNSCS
Trigger: TGAGCAAGAGTTGGGGGTCAGACCTATCATTCTGTCTCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
3UTR TCA 90 bp CAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCCAACTGTaGACCAAGGGTGAAGGCTGTGTTTCCGCCCCTCCACTCACACAC +
Preference number: 1 (lower is better)
Translates to: QVKYKSFDFRKQLQL*TKGEGCVSAPPLTH
Trigger: GTGTGTGAGTGGAGGGGCGGAAACACAGCCTTCACCCTTGGTTCACAGTTGGAGTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
3UTR-3UTR GCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCTGACCCCCAACTCTTaGTCATATTCTGATAAACTC +
Preference number: 2 (lower is better)
Translates to: HTLLHEARGPWLCSHADCLTPNS*SYSDKL
Trigger: GAGTTTATCAGAATATGAGCAAGAGTTGGGGGTCAG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
3UTR-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTAAATAATGCACATTaGCTGAGAGACAGAATGATA +
Preference number: 2 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLNNAH*LRDRMI
Trigger: TATCATTCTGTCTCTCAGGCAATGTGCATTATTTAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
3UTR GCA 72 bp GAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTaGGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: EARGPWLCSHAD*GTRSSRQCRCV
Trigger: CACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
3UTR GCA 72 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTaGTCTCATGCTGACTGCGGCACCCGGAGCTCCCGT +
Preference number: 3 (lower is better)
Translates to: HTLLHEARGPWL*SHADCGTRSSR
Trigger: ACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
3UTR TCA 72 bp TATAAATCCTTTGACTTTAGGAAACAACTCCAACTGTaGACCAAGGGTGAAGGCTGTGTTTCCGCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: YKSFDFRKQLQL*TKGEGCVSAPP
Trigger: TGGAGGGGCGGAAACACAGCCTTCACCCTTGGTTCACAGTTGGAGTTGTTTCCTAAAGTCAAAGGATTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCACAGGCCCAGGCGCATaGTCCTCCTCTCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCTGPGA*SSSLWT
Trigger: AGTCCACAGAGAGGAGGAGCATGCGCCTGGGCCTGT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCCTCTCTGTGGACTATaGGCACAGGCCCAGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRPLCGL*AQAQAH
Trigger: ATGCGCCTGGGCCTGTGCCCATAGTCCACAGAGAGG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGCCGAGTCGATAGGCTaGACTGTCTGCGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRAESIG*TVCDGG
Trigger: ACCACCGTCGCAGACAGTCCAGCCTATCGACTCGGC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGCAGAATGCCCACTCTaGCTGGACGCTCGGTTGCGT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRAECPL*LDARLR
Trigger: ACGCAACCGAGCGTCCAGCCAGAGTGGGCATTCTGC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCATGGGCTCCGGTGCATaGCCCTCATCTCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCMGSGA*PSSLWT
Trigger: AGTCCACAGAGATGAGGGGCATGCACCGGAGCCCAT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTGCACAGGGGTATTGTaGAGCCTCTCTTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCCTGVL*SLSSRD
Trigger: GTCCCGGGAAGAGAGGCTCCACAATACCCCTGTGCA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGAGTGTAGGTCTCGGTaGCCTCCGGGTTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIECRSR*PPGWQA
Trigger: GGCCTGCCAACCCGGAGGCCACCGAGACCTACACTC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCGGCTCCAAAGATGCCTaGGTTTTCTCCTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCGSKDA*VFSCCA
Trigger: GGCACAGCAGGAGAAAACTCAGGCATCTTTGGAGCC...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCTAGCAGCTCAGGGTTaGCAGCCTTGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCLAAQG*QPWGWW
Trigger: CCACCACCCCCAAGGCTGTCAACCCTGAGCTGCTAG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTGGAAGTGCAGGTGGTaGAGGTGGACTGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRWKCRW*RWTVFC
Trigger: GCAGAACACAGTCCACCTGCACCACCTGCACTTCCA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGGAGCCATGATTTCTTaGTTCTCTGCCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRGAMIS*FSARPL
Trigger: GAGGGGCCTGGCAGAGAAGCAAGAAATCATGGCTCC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTCCGTCTCCAGCTCCTaGGCCACCTCCTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMSVSSS*ATSSSA
Trigger: TGCAGACGAGGAGGTGGCCCAGGAGCTGGAGACGGA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCAGGGAGGTGGGGCATaGCTTTCAGAAAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRQGGGA*LSESSS
Trigger: TGAGCTGCTTTCTGAAAGCCATGCCCCACCTCCCTG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAATGAGCCCCGCTGCTaGTCTCTGCTCCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCNEPRC*SLLPSS
Trigger: AGAAGAAGGGAGCAGAGACCAGCAGCGGGGCTCATT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTGCTGGAAGTGCAGGTaGTGCAGGTGGACTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRCWKCR*CRWTVF
Trigger: GAACACAGTCCACCTGCACCACCTGCACTTCCAGCA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCACCTCTGGGGTCTCTaGAGGTTGAGGTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCHLWGL*RLRCGF
Trigger: AAAGCCACACCTCAACCTCCAGAGACCCCAGAGGTG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTCCGTTTCCTCTCCATaGGGAGACTCCACACGGGAA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRSVSSP*GDSTRE
Trigger: TTCCCGTGTGGAGTCTCCCCATGGAGAGGAAACGGA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTCAAGGGTCTCCATGTaGCCTGTGGGTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCSRVSM*PVGSPS
Trigger: GGAAGGAGAACCCACAGGCCACATGGAGACCCTTGA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTTCCCGGGACACAGATaGGACCAGCCTCTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRFPGHR*DQPLLQ
Trigger: TTGCAAGAGAGGCTGGTCCCATCTGTGTCCCGGGAA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCCTCAACCCCTGAGTTaGCAGGAAGTTTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRPQPLS*QEVWVQ
Trigger: CTGAACCCAAACTTCCTGTCAACTCAGGGGTTGAGG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTCTTTTCCTCTTCTCTaGAGCTCAGCGGGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRSFPLL*SSAGPF
Trigger: AAAGGGCCCCGCTGAGCTTCAGAGAAGAGGAAAAGA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCACCTCGTGGTCTTTGTaGATGTCCAGTGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCTSWSL*MSSALS
Trigger: GGACAAGGCACTGGACATTCACAAAGACCACGAGGT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGAGACGATACACTCCTaGTTGGTCTTGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRETIHS*LVLPSS
Trigger: TGAGGAGGGCAAGACCAAGCAGGAGTGTATCGTCTC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCATCAATGCTGGAAGTaGAGGTGGTGCAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCHQCWK*RWCRWT
Trigger: AGTCCACCTGCACCACCTGCACTTCCAGCATTGATG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCGATAGGGGTCTTGGCTaGACACTTCCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCDRGLG*TLPSSA
Trigger: TGCGGAAGATGGAAGTGTGCAGCCAAGACCCCTATC...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCGATGGCTTGACTGGCTaGTTCCTGATTCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCDGLTG*FLIQRA
Trigger: GGCTCTCTGAATCAGGAAGCAGCCAGTCAAGCCATC...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCAGGAGAGTGCTGTCTaGAGTACTCCAGAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRQESAV*STPECR
Trigger: CCTACACTCTGGAGTACTGCAGACAGCACTCTCCTG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTTACTGGCACTGTGGTaGCAGAAGAGCTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCLLALW*QKSWLL
Trigger: CAGAAGCCAGCTCTTCTGCCACCACAGTGCCAGTAA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTTGGCACCGTGGGTTTaGATGTGGGTGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRLAPWV*MWVTLA
Trigger: TGCAAGTGTCACCCACATCCAAACCCACGGTGCCAA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGAATGCCCACTCTGGCTaGACGCTCGGTTGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMNAHSG*TLGCVH
Trigger: GTGCACGCAACCGAGCGTCCAGCCAGAGTGGGCATT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTGTTTCCTCTGGAGGTaGGTGTGGTTTTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRCFLWR*VWFCHF
Trigger: GAAGTGGCAAAACCACACTCACCTCCAGAGGAAACA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCAAGCTCTTGCTCTCCTaGCAGGAAACTCCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCKLLLS*QETPRH
Trigger: GTGCCGGGGAGTTTCCTGTCAGGAGAGCAAGAGCTT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGAAATCACCCATTCCTaGGTCTGTGGCTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTREITHS*VCGYLL
Trigger: GAGGAGATAGCCACAGACTCAGGAATGGGTGATTTC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCATGTCGCCTTGGGAATaGTGTCTCAGAGTCCACACT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCMSPWE*CLRVHT
Trigger: AGTGTGGACTCTGAGACATCATTCCCAAGGCGACAT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCCATGGTTGCTGGAATaGTTGGTGGCTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRPWLLE*LVAPFC
Trigger: ACAGAATGGAGCCACCAAGCATTCCAGCAACCATGG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTGCGATGGCTCAGAATaGTCAGGCACAGGCGTGACC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETICDGSE*SGTGVT
Trigger: GGTCACGCCTGTGCCTGAGCATTCTGAGCCATCGCA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCATCTCTTCCATCAATaGTGGAAGTGCAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRHLFHQ*WKCRWC
Trigger: GCACCACCTGCACTTCCAGCATTGATGGAAGAGATG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCTGACATCAGATCAGTaGTCTCAGAGGACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRLTSDQ*SQRTPA
Trigger: AGCTGGAGTCCTCTGAGAGCACTGATCTGATGTCAG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTCTGCAGGAAGACCTTaGTCAGTGACGAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRSAGRP*SVTSDF
Trigger: GAAGTCACTCGTCACTGAGCAAGGTCTTCCTGCAGA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTGCTCCTCCTCTCTGTaGACTATGGGCTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCCSSSL*TMGSGA
Trigger: TGCGCCTGAGCCCATAGTCCACAGAGAGGAGGAGCA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGGCCAAGCTCTGGTGTaGAAGAGAATGAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIGQALV*KRMSPA
Trigger: AGCGGGGCTCATTCTCTTCCACACCAGAGCTTGGCC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCCATCCACTGGTTGGTaGTGGTACCAAATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCPSTGW*WYQIFS
Trigger: GCTGAAGATTTGGTACCACCACCAACCAGTGGATGG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTTCTTCCTGGGGATGTaGTTGGGTTTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCFFLGM*LGFCCL
Trigger: AAGGCAGCAGAAACCCAACCACATCCCCAGGAAGAA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCCTGCCTCATTACCCTaGCTGCTTGGCTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMPASLP*LLGSLS
Trigger: GGAGAGTGAGCCAAGCAGCCAGGGTAATGAGGCAGG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCCTGGGGTTCTAGTCTaGGAGGCTGTGGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIPGVLV*EAVEQP
Trigger: TGGCTGTTCCACAGCCTCCCAGACTAGAACCCCAGG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCCCTCACAGCTGAGCTaGTGCAGATGCCGAGTCGAT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCPSQLS*CRCRVD
Trigger: ATCGACTCGGCATCTGCACCAGCTCAGCTGTGAGGG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGTGGAAGATCTGCTTaGGTTGGTCTCCCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRSGRSA*VGLPGY
Trigger: ATAACCTGGGAGACCAACTCAAGCAGATCTTCCACT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGATGGCATGGAATGGTTaGCAGAAACCAAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRMAWNG*QKPSLP
Trigger: AGGAAGGCTTGGTTTCTGTCAACCATTCCATGCCAT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTTCTTCATCTGCCTCTaGGAAGTAGGGATAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCFFICL*EVGIVW
Trigger: CCAGACTATCCCTACTTCTCAGAGGCAGATGAAGAA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCTGCACTTGTTAGAGTaGGAGGTGCTGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCLHLLE*EVLWAP
Trigger: AGGAGCCCACAGCACCTCTCACTCTAACAAGTGCAG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTGTGCTGTCGCTTCTTaGGAATCCAGCACAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRCAVAS*ESSTAF
Trigger: AAAAGCTGTGCTGGATTCTCAAGAAGCGACAGCACA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTCCAGATTTCCTTCCTaGGTAAGAGAATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCSRFPS*VREWPS
Trigger: GGATGGCCATTCTCTTACTCAGGAAGGAAATCTGGA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGATCTTCCGCAGCCACTaGAGCACCAAGGGACAACTC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMIFRSH*STKGQL
Trigger: GAGTTGTCCCTTGGTGCTTCAGTGGCTGCGGAAGAT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCGACTGTGGGCCTGTCTaGCCATGTTTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCDCGPV*PCFLFL
Trigger: AAGAAACAAGAAACATGGTCAGACAGGCCCACAGTC...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAACTCTCAGTTGCTGTaGATCCTCTTCACCAACTGG +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRNSQLL*ILFTNW
Trigger: CCAGTTGGTGAAGAGGATTCACAGCAACTGAGAGTT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGTCTTCACGTTGAACTaGCACCATGGAAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRVFTLN*HHGKGR
Trigger: CCTTCCTTTTCCATGGTGGCAGTTCAACGTGAAGAC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCATGGGCTCAGGCACATaGTCCTCCTCTCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIMGSGT*SSSLWT
Trigger: AGTCCACAGAGAGGAGGAGCATGTGCCTGAGCCCAT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTATCTGCAGAAGAGCTaGTCTCATCAGGCACCTCAA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRYLQKS*SHQAPQ
Trigger: TTGAGGTGCCTGATGAGAGCAGCTCTTCTGCAGATA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTTGAGGTGTGGCTTTTaGTTTCACAGCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRLRCGF*FHSRDR
Trigger: TCTGTCCCTGCTGTGAAAGCAAAAGCCACACCTCAA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGATTTCTTGCTTCTCTaGCAGGCCCCTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMDFLLL*QAPLPC
Trigger: GCAGGGAAGAGGGGCCTGGCAGAGAAGCAAGAAATC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTTTCAGTTGGAGAGATaGGCTGTTCAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCFQLER*AVQASQ
Trigger: CTGAGAGGCTTGAACAGCGCATCTCTCCAACTGAAA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCATCTTTCACAGAGGTaGCTTCAGGCTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIHLSQR*LQAPGL
Trigger: CAGCCCAGGAGCCTGAAGGCACCTCTGTGAAAGATG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGTCCTGGAATGGAACTaGATAGCTCATCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRVLEWN*IAHLLG
Trigger: ACCCAGAAGATGAGCTATGCAGTTCCATTCCAGGAC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCATAGGTGGCACCTGCTaGAGATTCTTCTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCIGGTC*RFFFWE
Trigger: TTCCCAGAAGAAGAATCTGCAGCAGGTGCCACCTAT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTTCCTCGAAGCTCTGTaGTTTCTCATCATACTGCGC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRFLEAL*FLIILR
Trigger: GCGCAGTATGATGAGAAAGCACAGAGCTTCGAGGAA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTCACAGCTGAGCTGGTaGAGATGCCGAGTCGATAGG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMSQLSW*RCRVDR
Trigger: CCTATCGACTCGGCATCTGCACCAGCTCAGCTGTGA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCCCTCGTTGAACCTGTaGCTCACGATGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMPSLNL*LTMKSS
Trigger: GCTGCTCTTCATCGTGAGGCACAGGTTCAACGAGGG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCCTCTCTGTGGACTATaGACTCAGGCTCAGGCGCAT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIPLCGL*TQAQAH
Trigger: ATGCGCCTGAGCCTGAGTCCATAGTCCACAGAGAGG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCTGCAGAGACCTCATTaGATGAAGATAGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCLQRPH*MKIAQL
Trigger: GAGTTGGGCTATCTTCATCCAATGAGGTCTCTGCAG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGATTCTCTTGCTGATTaGTCTTCTGTCCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRDSLAD*SSVLSH
Trigger: GTGGGACAGGACAGAAGACCAATCAGCAAGAGAATC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTCCCAGAGGCATTGGTaGCTCTCACATAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRSQRHW*LSHRRS
Trigger: ACTTCTTCTATGTGAGAGCCACCAATGCCTCTGGGA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTGCTCCTCCTCTCTTTaGACTATGGACTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCCSSSL*TMDSGA
Trigger: TGCGCCTGAGTCCATAGTTCAAAGAGAGGAGGAGCA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTCTACCTCAACCCCTaGGTTGACAGGAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLYLNP*VDRKFG
Trigger: CCCAAACTTCCTGTCAACTCAGGGGTTGAGGTAGAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTGCTGGGTTTTTCCATaGGCTTTTCAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRCWVFP*AFQLER
Trigger: TCTCTCCAACTGAAAAGCTCATGGAAAAACCCAGCA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGCCAGCAAATGTGGTTaGGCCTTATCCAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRASKCG*ALSKET
Trigger: TGTTTCTTTGGATAAGGCTCAACCACATTTGCTGGC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGATCCACTGAAGGGATaGAGGCAGGGGCATGGATAT +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMDPLKG*RQGHGY
Trigger: ATATCCATGCCCCTGCCTTCATCCCTTCAGTGGATC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGTCCACATCTCTACTaGTACCCTTTGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRSPHLY*YPLEHF
Trigger: GAAATGCTCCAAAGGGTATCAGTAGAGATGTGGACT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTCAAGCTCAGGCACATaGTCCTCCTCTCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCSSSGT*SSSLWT
Trigger: AGTCCACAGAGAGGAGGAGCATGTGCCTGAGCTTGA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGAACTATGGGCTCAGGTaGATGCCCCTCATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMNYGLR*MPLISV
Trigger: CACAGAGATGAGGGGCATGCACCTGAGCCCATAGTT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTCCTCTTCCTGCCCTTaGTCTGATAGACCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCSSSCP*SDRPVG
Trigger: ACCCACAGGTCTATCAGAGCAAGGGCAGGAAGAGGA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGAAGATGTCTCCTCTaGTTGCCTGTTCATCTCATG +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRRRCLL*LPVHLM
Trigger: CATGAGATGAACAGGCAAGCAGAGGAGACATCTTCT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTCTGCAACTCTCAGTTaGTGTGAATCCTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCSATLS*CESSSP
Trigger: TGGTGAAGAGGATTCACAGCAACTGAGAGTTGCAGA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGATAGGCTGGACTGTCTaGGACGGTGGTTTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMIGWTV*DGGFPV
Trigger: TACTGGGAAACCACCGTCGCAGACAGTCCAGCCTAT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTGTGGCTCAGAGCAGTaGATGTACCATGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETICGSEQ*MYHEVS
Trigger: GGAGACCTCATGGTACATGCACTGCTCTGAGCCACA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCTCTCCAGGGTaGAGCAAGCTCTCTTACTTT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCGTSPG*SKLSYF
Trigger: AAAGTAAGAGAGCTTGCTCCACCCTGGAGAGGTGCC...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTGCTCCTCCTCTCTGTaGACTATGGGCTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCCSSSL*TMGSDE
Trigger: CTCATCTGAGCCCATAGTCCACAGAGAGGAGGAGCA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCCTCTCTGTGGACTATaGACTCAGGCTCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCPLCGL*TQAQAH
Trigger: ATGTGCCTGAGCCTGAGTCCATAGTCCACAGAGAGG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCTCTTGCGCATGTGCTaGAACAGAATACTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILLRMC*NRILSR
Trigger: GCGGCTGAGTATTCTGTTCCAGCACATGCGCAAGAG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGTGCTTCTCAGGCTCTaGGGGGAGCTTTATAAGCTC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIVLLRL*GELYKL
Trigger: GAGCTTATAAAGCTCCCCCCAGAGCCTGAGAAGCAC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTTTAACACCCAGCTCTaGCTTATCTGCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCFNTQL*LICRRA
Trigger: AGCTCTTCTGCAGATAAGCCAGAGCTGGGTGTTAAA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTCCTGGGGATGTGGTTaGGTTTCTGCTGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCSWGCG*VSAAFL
Trigger: GAGAAAGGCAGCAGAAACCCAACCACATCCCCAGGA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGATGCTCTGCAGGAAGTaGACCATCTGGTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMMLCRK*TIWSCR
Trigger: CCTGCATGACCAGATGGTCCACTTCCTGCAGAGCAT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCCACTGTCTTCACGTTaGACTGCCACCATGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMPLSSR*TATMEK
Trigger: CTTTTCCATGGTGGCAGTTCAACGTGAAGACAGTGG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCAAGTCAGACAAAACTaGATATTTCATCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCQVRQN*IFHPRP
Trigger: GGGTCTGGGATGAAATATTCAGTTTTGTCTGACTTG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGATAGGGGAACAAGGATaGATTCCAGGATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRIGEQG*IPGCLS
Trigger: TGACAAACATCCTGGAATTCATCCTTGTTCCCCTAT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGTTCCAAGGGAGCCATaGTTTCTTGCTTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIVPREP*FLASLP
Trigger: TGGCAGAGAAGCAAGAAATCATGGCTCCCTTGGAAC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGCCTCCTTTCCTCTTTaGGATCCACTCTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIASFPL*DPLYSH
Trigger: GTGAGAGTAGAGTGGATCTCAAAGAGGAAAGGAGGC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCACTCTTCTGATCTTCTaGAAGGCCAGCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCTLLIF*KASWLA
Trigger: AGCAAGCCAGCTGGCCTTTCAGAAGATCAGAAGAGT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGTCCCACACTTCCTGTaGAGCAGACATTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMVPHFL*SRHSWF
Trigger: GAACCAAGAATGTCTGCTTCACAGGAAGTGTGGGAC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTTCAAGGACCATGGTTaGTGGAATGCTTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIFKDHG*WNAWWL
Trigger: GAGCCACCAAGCATTCCAGCAACCATGGTCCTTGAA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTTCTTTCTCATCTTCTaGCTGAATGATGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCFFLIF*LNDGLR
Trigger: TCTGAGCCCATCATTCAGGCAGAAGATGAGAAAGAA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGTTTTCTCCTGCTGTaGCAGGATGAGATATTCAGA +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRSFLLL*QDEIFR
Trigger: TCTGAATATCTCATCCTGGCACAGCAGGAGAAAACT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTCAGGCTCCAAAGATaGCTGAGTTTTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLRLQR*LSFLLL
Trigger: CAGCAGGAGAAAACTCAGGCATCTTTGGAGCCTGAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGCAAAGGCAAACCACTaGCTAACTCGCTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMAKANH*LTRSSL
Trigger: TAGGGAAGAGCGAGTTAGGCAGTGGTTTGCCTTTGC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCTCTATGGCAGGTACTaGTTTCTCTACAGAGGGACC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILYGRY*FLYRGT
Trigger: GGTCCCTCTGTAGAGAAAGCAGTACCTGCCATAGAG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCTGAAGCCCAAGGAGTaGAAGATCTGCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILKPKE*KICLSW
Trigger: CCAACTCAAGCAGATCTTCCACTCCTTGGGCTTCAG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCAAGGACCATGGTTGCTaGAATGCTTGGTGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCKDHGC*NAWWLH
Trigger: ATGGAGCCACCAAGCATTCCAGCAACCATGGTCCTT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCTTCTCTGCCTCCCATaGCATGGAATGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILLCLP*HGMVDR
Trigger: TCTGTCAACCATTCCATGCCATGGGAGGCAGAGAAG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGGCTCAAACTTTTCTTaGATGGCTGGCGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMGSNFS*MAGAGL
Trigger: AAGACCAGCGCCAGCCATCCAAGAAAAGTTTGAGCC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTGCTATTGTAACTGCTaGCAGACTACTCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRCYCNC*QTTLCI
Trigger: GATGCAAAGAGTAGTCTGCCAGCAGTTACAATAGCA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGTGATCTGTATCCAGTaGAGCAGCCCCAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMVICIQ*SSPKFL
Trigger: GAGAAACTTGGGGCTGCTCCACTGGATACAGATCAC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGGAAAGTGTGGACTGTaGGCCTGTCTGACCATGTTT +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMGKCGL*ACLTMF
Trigger: AAACATGGTCAGACAGGCCCACAGTCCACACTTTCC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAAGTCAGTGTTTTGGTaGCTTCCTCTGAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCKSVFW*LPLKIP
Trigger: AGGAATCTTCAGAGGAAGCCACCAAAACACTGACTT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCATTACCCTGGCTGCTTaGCTCACTCTCCAGAACACA +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCITLAA*LTLQNT
Trigger: TGTGTTCTGGAGAGTGAGCCAAGCAGCCAGGGTAAT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCTTCAGGAGCATAGGTaGCACCTGCTGCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCLQEHR*HLLQIL
Trigger: AAGAATCTGCAGCAGGTGCCACCTATGCTCCTGAAG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGCTCTTCTGGTAAGATaGCTTGACTGGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCALLVR*LDWLLP
Trigger: AGGAAGCAGCCAGTCAAGCCATCTTACCAGAAGAGC...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCAGGAAGTGGACCATCTaGTCATGCAGGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCRKWTI*SCRNSI
Trigger: GATGGAGTTCCTGCATGACCAGATGGTCCACTTCCT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCAAGCTGTGCTCTCCATaGCAGACAGCAGCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIKLCSP*QTAAFH
Trigger: ATGAAAGGCTGCTGTCTGCCATGGAGAGCACAGCTT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAAATGTGTATCTCTGTaGCTCAGAGCAGTGCATGTA +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCKCVSL*LRAVHV
Trigger: TACATGCACTGCTCTGAGCCACAGAGATACACATTT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCATTCTGTGGGTCTTTaGTTCATCAGCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMHSVGL*FISWLL
Trigger: CAACAGCCAGCTGATGAATCAAAGACCCACAGAATG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTGTTCATCTCATGTCTaGGGGCCAGTAATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMCSSHV*GPVMLE
Trigger: CTCCAACATTACTGGCCCTCAGACATGAGATGAACA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTGTCCTTTGGAGAAATaGGACTCTCTTTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCCPLEK*DSLSLL
Trigger: CAAAAGTGAAAGAGAGTCTCATTTCTCCAAAGGACA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCATAGTTACTTGCTGCTaGAGAGGGCGGTTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCIVTCC*RGRFVS
Trigger: AGAAACGAACCGCCCTCTTCAGCAGCAAGTAACTAT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCTAAAGGCACTCTTCTaGTCTTCTGAAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILKALF*SSERPA
Trigger: AGCTGGCCTTTCAGAAGATCAGAAGAGTGCCTTTAG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTGGCAGACTACTCTTTaGATCTCTCTTCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMWQTTL*ISLLPS
Trigger: GGATGGGAGAAGAGAGATGCAAAGAGTAGTCTGCCA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTGCAGAAGAGGAAGCTaGTATTGTAACTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMCRRGS*YCNCWQ
Trigger: CTGCCAGCAGTTACAATAGCAGCTTCCTCTTCTGCA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGTGACTGCTCTGACTTaGTCTGTAATGGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMVTALT*SVMGAF
Trigger: GAAAGCTCCCATTACAGAGCAAGTCAGAGCAGTCAC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCAAGATCTGCTTGAGTTaGTCTCCCAGGTTATCCCAC +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCKICLS*SPRLSH
Trigger: GTGGGATAACCTGGGAGACCAACTCAAGCAGATCTT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTCTTCTTCTGGGCTCTaGGCTAATTTCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCSSSGL*ANFLWG
Trigger: TCCCCAAAGGAAATTAGCCCAGAGCCCAGAAGAAGA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCAGCTGTATCATTTCTaGCACTGGAGGGAAATGCGT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIQLYHF*HWREMR
Trigger: ACGCATTTCCCTCCAGTGCCAGAAATGATACAGCTG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCATCAGCTGGCTGTTGTaGCATCATTTGTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIISWLL*HHLWKA
Trigger: AGCCTTCCACAAATGATGCCACAACAGCCAGCTGAT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGGTGGCTCCATTCTGTaGGTCTTTGATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIGGSIL*VFDSSA
Trigger: AGCTGATGAATCAAAGACCCACAGAATGGAGCCACC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTCTTTCAAGGACCATaGTTGCTGGAATGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLFQGP*LLECLV
Trigger: CACCAAGCATTCCAGCAACCATGGTCCTTGAAAGAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTCCCATGGCATGGAATaGTTGACAGAAACCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMSHGME*LTETKP
Trigger: AGGCTTGGTTTCTGTCAACCATTCCATGCCATGGGA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTTTCCCTTCCGACTCTaGGCAAAGCCATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMFPFRL*AKPSVH
Trigger: ATGAACAGATGGCTTTGCCCAGAGTCGGAAGGGAAA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCAGCTGCCCAGTTCCTaGTTTTCTATCTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIQLPSS*FSIFML
Trigger: CAGCATGAAGATAGAAAACCAGGAACTGGGCAGCTG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAAGAAGTCAGTGTTTTaGTGGCTTCCTCTGAAGATT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCKKSVF*WLPLKI
Trigger: AATCTTCAGAGGAAGCCACCAAAACACTGACTTCTT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGATCCTCTTCACCAACTaGCTTTTCTTCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMILFTN*LFFQAL
Trigger: CAAGGCCTGGAAGAAAAGCCAGTTGGTGAAGAGGAT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTGTCAGAACATCTTGTaGTTCCAGAGAATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCCQNIL*FQRIPF
Trigger: AAAAGGAATTCTCTGGAATCACAAGATGTTCTGACA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTGGCTCTCAGTAATATaGAGAGGAGCCATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMWLSVI*RGAMFW
Trigger: CCAAAACATGGCTCCTCTTCATATTACTGAGAGCCA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTTTTGCATCTCTGCATaGGATAATTTGCTATCATCC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRFCISA*DNLLSS
Trigger: GGATGATAGCAAATTATCTCATGCAGAGATGCAAAA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGATGGGCTCTTTTCTGTaGTCTACTTCAGGGGACAAA +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMMGSFL*STSGDK
Trigger: TTTGTCCCCTGAAGTAGAGCACAGAAAAGAGCCCAT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCATATTGTCCTCTTCCTaGCCTTGCTCTGATAGACCT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCILSSS*PCSDRP
Trigger: AGGTCTATCAGAGCAAGGGCAGGAAGAGGACAATAT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGTTTTGCTCTGTTTCTaGGATTCGGTATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCVLLCF*DSVWWD
Trigger: ATCCCACCATACCGAATCGCAGAAACAGAGCAAAAC...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCTCACCAGACACTGGTaGTTTGCTTGTTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILTRHW*FACFLV
Trigger: AACCAAGAAACAAGCAAAGCACCAGTGTCTGGTGAG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTTTCCTTGTGATCACTaGTTGGCTCTTCCTTACGTG +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCFPCDH*LALPYV
Trigger: CACGTAAGGAAGAGCCAAGCAGTGATCACAAGGAAA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGCTTTCTCATCATACTaGGCCAAAACCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIAFSSY*AKTLFI
Trigger: GATGAAGAGGGTTTTGGCGCAGTATGATGAGAAAGC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTATCATTTCTGGCACTaGAGGGAAATGCGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIYHFWH*REMRVL
Trigger: CAGAACACGCATTTCCCTCCAGTGCCAGAAATGATA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCAGATGTCTTCTCAGTaGTGGATGGAGAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIQMSSQ*WMEKET
Trigger: AGTCTCTTTCTCCATCCACCACTGAGAAGACATCTG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGATCAGAAAGGCCTCTTaGTTTGAATTGGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMIRKAS*FELGHV
Trigger: GACATGCCCCAATTCAAACCAAGAGGCCTTTCTGAT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTGGGCAAAACGGATGTaGTTTCTTCCTTTACCACTG +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCWAKRM*FLPLPL
Trigger: CAGTGGTAAAGGAAGAAACCACATCCGTTTTGCCCA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCATCAAGCTTAGTTACTaGCACTGTGGTGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCIKLSY*HCGGRR
Trigger: TCTTCTGCCACCACAGTGCCAGTAACTAAGCTTGAT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTTGTTTCTTGGTTTCTaGTTTCAGATGTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRLFLGF*FQMCDL
Trigger: CAGATCACACATCTGAAACCAGAAACCAAGAAACAA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTTCTCACCAGACACTaGTGCTTTGCTTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLLTRH*CFACFL
Trigger: CAAGAAACAAGCAAAGCACCAGTGTCTGGTGAGAAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTTGACTGAACCCTTCTaGGTTCCTGAGATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILTEPF*VPEIAS
Trigger: AGAAGCTATCTCAGGAACCCAGAAGGGTTCAGTCAA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAATGTTCCAAAGAAGTaGGTTTTGGCATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LHEARGPWLCSHADCGTRNVPKK*VLAFLV
Trigger: GACAAGAAATGCCAAAACCCACTTCTTTGGAACATT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGACAGAAGTCTCTGGTTaGTATAGTCCAGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMTEVSG*YSPAEC
Trigger: GCATTCTGCTGGACTATACCAACCAGAGACTTCTGT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTTCTTTTGCTCTTCGTaGCTAAACAATGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMFFCSS*LNNEVL
Trigger: CAGGACCTCATTGTTTAGTCACGAAGAGCAAAAGAA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTATCTCTACTATCAATaGGTTCTGACCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCYLYYQ*VLTQQL
Trigger: CAACTGCTGGGTCAGAACTCATTGATAGTAGAGATA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTTCCAGTTCTTCCTTTaGTCTTTCAAGGACCATGGT +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMFQFFL*SFKDHG
Trigger: ACCATGGTCCTTGAAAGAGCAAAGGAAGAACTGGAA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGATCAGATACAGAAACTaGCTCTACTTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMIRYRN*LYFQLL
Trigger: GAGAAGCTGGAAGTAGAGGCAGTTTCTGTATCTGAT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCCTTACTATCTGGAATaGTTGATCCAAACAATAAAC +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCPYYLE*LIQTIN
Trigger: GTTTATTGTTTGGATCAAGCATTCCAGATAGTAAGG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTTGCAACTCTCCTACTaGTTCATTTTCCCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILQLSY*FIFPEF
Trigger: GAACTCAGGGAAAATGAAGCAGTAGGAGAGTTGCAA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCGGCCAACAACTTTGTaGTGTTCTTCCAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMRPTTL*CSSRFF
Trigger: GAAAAATCTGGAAGAACAGCACAAAGTTGTTGGCCG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCATTGACATCTGGACTTaGATTTCCTGCCTCATTACC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIIDIWT*ISCLIT
Trigger: GGTAATGAGGCAGGAAATGCAAGTCCAGATGTCAAT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTTTGTGAATGTCCAGTaGCTTGTCCATTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMFVNVQ*LVHFRD
Trigger: GTCTCTGAAATGGACAAGGCACTGGACATTCACAAA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGCACCTCACTCACAATaGCACTGTAGAAAAATGTGT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIAPHSQ*HCRKMC
Trigger: ACACATTTTTCTACAGTGGCATTGTGAGTGAGGTGC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTTGTCACAAATGGCTTaGGTTGCTCCAAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILSQMA*VAPNSP
Trigger: AGGAGAATTTGGAGCAACCCAAGCCATTTGTGACAA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTGTGACTATATGTTCTaGTTTTTCAACAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCCDYMF*FFNNWC
Trigger: ACACCAGTTGTTGAAAAACCAGAACATATAGTCACA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACCTCTCTCTCCCCGATaGAGCCGCAGGAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRPLSPR*SRRKFP
Trigger: AGGGAACTTCCTGCGGCTTCATCGGGGAGAGAGAGG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGTTACAGTTTCGTCATaGAGAATGTCGTCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMVTVSS*RMSSLS
Trigger: ACTCAAAGACGACATTCTTCATGACGAAACTGTAAC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCAAGGATTCTGATCCTTaGGATAACACTTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIKDSDP*DNTSLG
Trigger: ACCCAAAGAAGTGTTATCTCAAGGATCAGAATCCTT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCAAGATCACTTAAACTaGCTTTTGATTCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMQDHLN*LLIPLA
Trigger: TGCCAGTGGAATCAAAAGGCAGTTTAAGTGATCTTG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCTGCATGAGATAATTTaGTATCATCCTTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILHEII*YHPFLA
Trigger: GGCCAGAAAAGGATGATAGCAAATTATCTCATGCAG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCATCATTTCCTCGTTCTaGATTTCCAGTCGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCIISSF*ISSRFS
Trigger: TGAGAAACGACTGGAAATGCAGAACGAGGAAATGAT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTTGTGGCATCATTTGTaGAAGGCTGAGATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLWHHL*KAEIFF
Trigger: GAAGAAAATCTCAGCCTTCCACAAATGATGCCACAA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTTTAGCCAGCAAATGTaGTTGAGCCTTATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIFSQQM*LSLIQR
Trigger: TCTTTGGATAAGGCTCAACCACATTTGCTGGCTAAA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTGGTTTTTCAACAACTaGTGTTGGTTTAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HTLLHEARGPWLCSHADCWFFNN*CWFSQQ
Trigger: TTGCTGGCTAAACCAACACCAGTTGTTGAAAAACCA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCTGTCATCTGGTTTTTaGATAGCCAAAGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: MLTAAPGAPVSAGVWETILSSGF*IAKDFC
Trigger: GCAAAAGTCTTTGGCTATCCAAAAACCAGATGACAG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTCCTCCTTTGTCTTATaGGTTTCCTTTGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMSSFVL*VSFVSF
Trigger: AAATGAGACAAAGGAAACTCATAAGACAAAGGAGGA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGCAGTGCATGTACCATaGGGTCTCCCCTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRAVHVP*GLPLSQ
Trigger: CTGGGACAAGGGGAGACCTCATGGTACATGCACTGC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAAGGTGGACTGTGTTCTaGTCCCCTCTCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRRWTVF*SPLSPR
Trigger: TCGGGGAGAGAGAGGGGAGCAGAACACAGTCCACCT...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTAAGTCTTCAAATATaGAGCAACTTTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLSLQI*SNFPSL
Trigger: CAGTGAAGGAAAGTTGCTGCATATTTGAAGACTTAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGGCTCTAAGCCCAGGTaGAGAGTACATCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRGSKPR*RVHLPG
Trigger: GCCTGGGAGATGTACTCTGCACCTGGGCTTAGAGCC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGATGGCCCAGGGAGGTaGGGCATGGCTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRDGPGR*GMAFRK
Trigger: CTTTCTGAAAGCCATGCCCCACCTCCCTGGGCCATC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACCCGCTGCTGGTCTCTaGTCCCTTCTTCTGATTGGA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRPAAGL*SLLLIG
Trigger: TCCAATCAGAAGAAGGGAGCAGAGACCAGCAGCGGG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGACTGTCTGCGACGGTaGTTTCCCAGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRDCLRR*FPSNAG
Trigger: GCCAGCATTACTGGGAAACCACCGTCGCAGACAGTC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGGTCTGACTTTCTCCTaGAGCCCAAGGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRGLTFS*SPRSGR
Trigger: TCTTCCACTCCTTGGGCTTCAGGAGAAAGTCAGACC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGATTCCTCTGGTGGAGATaGGGGCAGCTTCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRFLWWR*GQLHSV
Trigger: AACAGAGTGAAGCTGCCCTCATCTCCACCAGAGGAA...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAAGCTTTCTGCTGCATTaGCGCCTCATCAAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRSFLLH*RLIKGL
Trigger: GAGACCCTTGATGAGGCGGCAATGCAGCAGAAAGCT...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACATCTCTGTGGACTATaGGCTCAGGCACATGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRHLCGL*AQAHAP
Trigger: AGGAGCATGTGCCTGAGCCCATAGTCCACAGAGATG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACTGAGGGCTGAGAGGTaGGCAAAACGGATGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRLRAER*AKRMWF
Trigger: AAACCACATCCGTTTTGCCCACCTCTCAGCCCTCAG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGGTGTTCCACAGGGCTaGCAAGAGATGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRGVPQG*QEMDLS
Trigger: TGACAGATCCATCTCTTGCCAGCCCTGTGGAACACC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACACGCTCCAGTACACTaGAATTGTTGTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRHAPVH*NCCAGS
Trigger: GCTACCAGCACAACAATTGCAGTGTACTGGAGCGTG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACATCTTCTGCCTGAATaGTGGGCTCAGAAACACGTT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRHLLPE*WAQKHV
Trigger: AACGTGTTTCTGAGCCCATCATTCAGGCAGAAGATG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACGGGGACATTCAGATTaGCATCTGGACTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRRGHSD*HLDLHF
Trigger: GAAATGCAAGTCCAGATGTCAATCTGAATGTCCCCG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTGGCAGGCCGCCATCTaGCAGTGGCAGTGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNWQAAI*QWQCSN
Trigger: GTTGGAACACTGCCACTGTCAGATGGCGGCCTGCCA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACAACTCTTGCGCATGTaGTGGAACAGAATACTCAGC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRQLLRM*WNRILS
Trigger: GCTGAGTATTCTGTTCCAGCACATGCGCAAGAGTTG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACTTCTCAGTGGTGGATaGAGAAAGAGACTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRLLSGG*RKRLLR
Trigger: TCTGAGCAGTCTCTTTCTCCATCCACCACTGAGAAG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACTTGTGATCACTGCTTaGCTCTTCCTTACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRLVITA*LFLTCR
Trigger: TCTGCACGTAAGGAAGAGCCAAGCAGTGATCACAAG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAATCCTTCTCCTCTGTTaGACGTTCCACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRILLLC*TFHFLF
Trigger: GAAGAGGAAGTGGAACGTCCAACAGAGGAGAAGGAT...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACAGACACTGGTGCTTTaGTTGTTTCTTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRQTLVL*LFLGFW
Trigger: CCAGAAACCAAGAAACAAGCAAAGCACCAGTGTCTG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACAGAGACCAGGCTTTTaGAGGTGTAGCAGTAAGATT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRQRPGF*RCSSKI
Trigger: AATCTTACTGCTACACCTGCAAAAGCCTGGTCTCTG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGGCTGGACGCTCGGTTaGGTGCACCTCACTCACAAT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNGWTLG*VHLTHN
Trigger: ATTGTGAGTGAGGTGCACGCAACCGAGCGTCCAGCC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTGCTCCTCCTCTCTGTaGACTATGGGCACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNCSSSL*TMGTGP
Trigger: TGGGCCTGTGCCCATAGTCCACAGAGAGGAGGAGCA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGTTCCCTGGTTATTTTaGACTCCTGTTTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRVPWLF*TPVSLP
Trigger: CGGAAGTGAAACAGGAGTCCAAAATAACCAGGGAAC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACATGAGCTTTTCAGTTaGAGAGATGCGCTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRHELFS*RDALFK
Trigger: CTTGAACAGCGCATCTCTCCAACTGAAAAGCTCATG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACAGCCTTGGGGGTGGTaGGAAATATTTGTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRQPWGW*EIFVFL
Trigger: CAAAAAGACAAATATTTCCCACCACCCCCAAGGCTG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCAGATTCTGGTGAGTaGCACACGCTCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSDSGE*HTLSEA
Trigger: GGCCTCAGAGAGCGTGTGTCACTCACCAGAATCTGA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGGTGAAACTGAGGGCTaGGAGGTGGGCAAAACGGAT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNGETEG*EVGKTD
Trigger: ATCCGTTTTGCCCACCTCTCAGCCCTCAGTTTCACC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGATTTCTATCTTCATGCTaGTTGACTAAGCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRFLSSC*LTKPSG
Trigger: GCCAGATGGCTTAGTCAATCAGCATGAAGATAGAAA...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGGGGTCTCTGGAGGTTaGGGTGTGGCTTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNGVSGG*GVAFAF
Trigger: GAAAGCAAAAGCCACACCTCAACCTCCAGAGACCCC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTTCTTCCTGATCCACTaGAGGGATGAAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNFFLIH*RDEGRG
Trigger: GCCCCTGCCTTCATCCCTTCAGTGGATCAGGAAGAA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGATGGAGAAAGAGACTaGTCAGATACAGAGGTCATA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRDGERD*SDTEVI
Trigger: TATGACCTCTGTATCTGAGCAGTCTCTTTCTCCATC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCGCCCTCAGGAGAGTaGTGTCTGCAGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSPSGE*CLQYSR
Trigger: TCTGGAGTACTGCAGACAGCACTCTCCTGAGGGCGA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGATTTAATGGGAGCTTGTaGTCACCTGTTTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRFNGSL*SPVFNS
Trigger: GCTGTTGAAAACAGGTGACCACAAGCTCCCATTAAA...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACCAGGTGTTGTCCTTTaGAGAAATGAGACTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRPGVVL*RNETLF
Trigger: AAAGAGAGTCTCATTTCTCCAAAGGACAACACCTGG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGATCATTTGTGGAAGGCTaGGATTTTCTTCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRSFVEG*DFLLDQ
Trigger: CTGATCAAGAAGAAAATCTCAGCCTTCCACAAATGA...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACCCTGCTGTGCCAGGATaGGATATTCAGACACAGAGG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNPAVPG*DIQTQR
Trigger: CCTCTGTGTCTGAATATCTCATCCTGGCACAGCAGG...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGATATCTTCATGCTGATTaGCTAAGCCATCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRYLHAD*LSHLAF
Trigger: AAAAGCCAGATGGCTTAGTCAATCAGCATGAAGATA...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACACCCTTCTGGGTTCCTaGGATAGCTTCTCACCAGAC +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNTLLGS*DSFSPD
Trigger: GTCTGGTGAGAAGCTATCTCAGGAACCCAGAAGGGT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGAAAATACCCATTCCTaGACTTCCTTTTCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRENTHS*TSFSLL
Trigger: TAGGAGAGAAAAGGAAGTGCAGGAATGGGTATTTTC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACCCTCATTACCCTGGCTaGTTGGCTCACTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNPHYPG*LAHSPE
Trigger: TTCTGGAGAGTGAGCCAAGCAGCCAGGGTAATGAGG...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTATAGTCCAGCAGAATaGCCACTCTGGCTGGACGCT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNYSPAE*PLWLDA
Trigger: AGCGTCCAGCCAGAGTGGGCATTCTGCTGGACTATA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTGCTCCTCCCCTCTGTaGACTATGGACTCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNCSSPL*TMDSSS
Trigger: TGAGCTTGAGTCCATAGTCCACAGAGGGGAGGAGCA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACAGAGTGGGGACTGGATaGCAGATGTCTTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNRVGTG*QMSSQW
Trigger: CCACTGAGAAGACATCTGCCATCCAGTCCCCACTCT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACCTTTTGTGTCACCTCTaGGGTCTCTGGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNLLCHL*GLWRLR
Trigger: CCTCAACCTCCAGAGACCCCAGAGGTGACACAAAAG...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGAGACCTCTGGCTTCTaGCGTCTTTGGCTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNETSGF*RLWLSV
Trigger: TACTGAGAGCCAAAGACGCCAGAAGCCAGAGGTCTC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACTCAAAATACATACCTaGTCCATCATCAGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRLKIHT*SIISVR
Trigger: TCTGACACTGATGATGGACCAGGTATGTATTTTGAG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCAGAGGACTCCAGCTaGCCAGTTCCTGGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSEDSS*PVPGFL
Trigger: TAGAAAACCAGGAACTGGGCAGCTGGAGTCCTCTGA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACAAAGAAGTGGGTTTTaGCATTTCTTGTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRQRSGF*HFLSKS
Trigger: AGACTTAGACAAGAAATGCCAAAACCCACTTCTTTG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAAGCATTTCTGTCATCTaGTTTTTGGATAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRSISVI*FLDSQR
Trigger: TCTTTGGCTATCCAAAAACCAGATGACAGAAATGCT...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCGTCCCAGAGGCATTaGTGGCTCTCACATAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSSQRH*WLSHRR
Trigger: TCTTCTATGTGAGAGCCACCAATGCCTCTGGGACGA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGGAGATCTGGAGAGCTaGGTGAGCTGTTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNGDLES*VSCFSQ
Trigger: TTGAGAGAAACAGCTCACCCAGCTCTCCAGATCTCC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACATCATCTACAGCCTTTaGCTGAACCCTTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNIIYSL*LNPSGF
Trigger: GAACCCAGAAGGGTTCAGTCAAAGGCTGTAGATGAT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACATCTGGAGAGCTGGGTaGGCTGTTTCTCTCAATAAG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNIWRAG*AVSLNK
Trigger: CTTATTGAGAGAAACAGCTCACCCAGCTCTCCAGAT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGATGTCTCCTCTGCTTaGCTGTTCATCTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNDVSSA*LFISCL
Trigger: CAGACATGAGATGAACAGGCAAGCAGAGGAGACATC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACAAGTCATACTCATCCTaGACAGGGGTATTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNKSYSS*TGVLWS
Trigger: GCTCCACAATACCCCTGTGCAGGATGAGTATGACTT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACCTCCCTTCTTCTGATTaGACCACTTGTTCGGATGAG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNLPSSD*TTCSDE
Trigger: CTCATCCGAACAAGTGGTCCAATCAGAAGAAGGGAG...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACCCGCAGGAAGTTCCCTaGTTATTTTGGACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNPQEVP*LFWTPV
Trigger: AACAGGAGTCCAAAATAACCAGGGAACTTCCTGCGG...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACAAAGGCCTCTTGGTTTaGATTGGGGCATGTCATCTA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNKGLLV*IGACHL
Trigger: TAGATGACATGCCCCAATTCAAACCAAGAGGCCTTT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACCACTCTACTCTCACCTaGCTTTTCCAACTCCAGATT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNHSTLT*LFQLQI
Trigger: AATCTGGAGTTGGAAAAGTCAGGTGAGAGTAGAGTG...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTGTTCACTTTCTTCCTaGTCCACTGAAGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNCSLSS*STEGMK
Trigger: CTTCATCCCTTCAGTGGATCAGGAAGAAAGTGAACA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTTTCTTTCCCTTCTCTaGAGGAAGACCTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNFLSLL*RKTLLS
Trigger: ACTGAGCAAGGTCTTCCTGCAGAGAAGGGAAAGAAA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACATGTGGTTGGGTTTCTaGTGCCTTTCTCTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNMWLGF*CLSLPN
Trigger: ATTAGGGAGAGAAAGGCAGCAGAAACCCAACCACAT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGCTCTTTTTGCTCAATaGGGAGGTCAAAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNALFAQ*GGQKKQ
Trigger: CTGCTTCTTTTGACCTCCCCATTGAGCAAAAAGAGC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACATGAAGGCAGGGGCATaGATATTCAATATCTCGCAG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNMKAGA*IFNISQ
Trigger: CTGCGAGATATTGAATATCCATGCCCCTGCCTTCAT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTGCAGATTCTTCTTCTaGGAAAGACTCTTGTACGGG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNCRFFF*ERLLYG
Trigger: CCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGCA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACATCAGCACTGATCTCTaGTGCACTAAGCATAAACTG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNISTDL*CTKHKL
Trigger: CAGTTTATGCTTAGTGCATCAGAGATCAGTGCTGAT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACCGTTTAGGCTCTTTTTaGTCAATGGGGAGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNRLGSF*SMGRSK
Trigger: TTTTGACCTCCCCATTGAGCAAAAAGAGCCTAAACG...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCTAACTTGCTCTTCTaGGTTTTATGGGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSNLLF*VLWEAA
Trigger: AGCTGCTTCCCATAAAACGCAGAAGAGCAAGTTAGA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACAGCTTCTCTGGTGTATaGTTCAAATCCTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSFSGV*FKSCRT
Trigger: AGTCCTACAGGATTTGAACCATACACCAGAGAAGCT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR TCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCCACAGCTTCCAAGTaGTGCTTTGAAATAAGAACA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSTASK*CFEIRT
Trigger: TGTTCTTATTTCAAAGCATCACTTGGAAGCTGTGGA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR GCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACATTCTCCTTCTTCTCTaGCAATTGTTTAACACCCAG +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNILLLL*QLFNTQ
Trigger: CTGGGTGTTAAACAATTGGCAGAGAAGAAGGAGAAT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CCA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTGGGCTAATTTCCTTTaGGGAACTATATTAGAACCA +
Preference number: 4 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNWANFL*GTILEP
Trigger: TGGTTCTAATATAGTTCCCCAAAGGAAATTAGCCCA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGGAGGTCCTGGACCCTTaGGAGAGGGCACCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTREVLDP*ERAPLQ
Trigger: CTGGAGAGGTGCCCTCTCCAAAGGGTCCAGGACCTC...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTCTAGCAGCTCAGGGTaGACAGCCTTGGGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTRSSSSG*TALGVV
Trigger: CACCACCCCCAAGGCTGTCAACCCTGAGCTGCTAGA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp CCCCTTGTCCCAGGGCACCAGCCCTCACAGCTGAGCTGGTGCAGATaGCGAGTCGATAGGCTGGACTGTCTGCGACGGTGGTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: PLVPGHQPSQLSWCR*RVDRLDCLRRWFPS
Trigger: ACTGGGAAACCACCGTCGCAGACAGTCCAGCCTATCGACTCGGCATCTGCACCAGCTCAGCTGTGAGGGCTGGTGCCCTGGGACAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TACACTCCTGCTTGGTCTTGCCCTCCTCATCCTCATCTGATAACCTaGCGTCGGGCTCCTCCTCCGACTCGGCCGCCGTCTCCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: YTPAWSCPPHPHLIT*RRAPPPTRPPSPPP
Trigger: AGGGGGAGGAGACGGCGGCCGAGTCGGAGGAGGAGCCCGACGCCAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp ATGAGGTCTCCCCTTGTCCCAGGGCACCAGCCCTCACAGCTGAGCTaGTGCAGATGCCGAGTCGATAGGCTGGACTGTCTGCGACGGTGG +
Preference number: 5 (lower is better)
Translates to: MRSPLVPGHQPSQLS*CRCRVDRLDCLRRW
Trigger: CCACCGTCGCAGACAGTCCAGCCTATCGACTCGGCATCTGCACCAGCTCAGCTGTGAGGGCTGGTGCCCTGGGACAAGGGGAGACCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCATTACCCTGGCTGCTaGGCTCACTCTCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTRHYPGC*AHSPEH
Trigger: GTGTTCTGGAGAGTGAGCCAAGCAGCCAGGGTAATG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CCAGCACTGAGGGGATCTCCGTCAGCCGTCTCCTCTCAGAGAAGCTaGTCACCGTCCCGTTCGCGGAGATCTGGAGAGCTGGGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PALRGSPSAVSSQRS*SPSRSRRSGELGEL
Trigger: CAGCTCACCCAGCTCTCCAGATCTCCGCGAACGGGACGGTGATCAGCTTCTCTGAGAGGAGACGGCTGACGGAGATCCCCTCAGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp AGGTCTCCCCTTGTCCCAGGGCACCAGCCCTCACAGCTGAGCTGGTaGAGATGCCGAGTCGATAGGCTGGACTGTCTGCGACGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: RSPLVPGHQPSQLSW*RCRVDRLDCLRRWF
Trigger: AAACCACCGTCGCAGACAGTCCAGCCTATCGACTCGGCATCTGCACCAGCTCAGCTGTGAGGGCTGGTGCCCTGGGACAAGGGGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp AGCTGGTGCAGATGCCGAGTCGATAGGCTGGACTGTCTGCGACGGTaGTTTCCCAGTAATGCTGGCCGCAGGCAGGCAGCTCCTCACCCA +
Preference number: 5 (lower is better)
Translates to: SWCRCRVDRLDCLRR*FPSNAGRRQAAPHP
Trigger: TGGGTGAGGAGCTGCCTGCCTGCGGCCAGCATTACTGGGAAACCACCGTCGCAGACAGTCCAGCCTATCGACTCGGCATCTGCACCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTGGCTCAAACTTTTCTaGGATGGCTGGCGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTRWLKLF*DGWRWS
Trigger: AGACCAGCGCCAGCCATCCAAGAAAAGTTTGAGCCA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCACTGGCACGCTCAGTaGTCACAAATGGCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTRHWHAQ*SQMAWV
Trigger: AACCCAAGCCATTTGTGACAACTGAGCGTGCCAGTG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCTGGGGTCTCTGGAGGTaGAGGTGTGGCTTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCWGLWR*RCGFCF
Trigger: AAAGCAAAAGCCACACCTCAACCTCCAGAGACCCCA...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTGGCTGGACGCTCGGTaGCGTGCACCTCACTCACAA +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMWLDAR*RAPHSQ
Trigger: TTGTGAGTGAGGTGCACGCAACCGAGCGTCCAGCCA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp GCATGCTCCTCCCCTCTGTGGACTATGGACTCAAGCTCAGGCACATaGTCCTCCTCTCTGTGGACTATGGGCACAGGCCCAGGCGCATGC +
Preference number: 5 (lower is better)
Translates to: ACSSPLWTMDSSSGT*SSSLWTMGTGPGAC
Trigger: GCATGCGCCTGGGCCTGTGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCTTGAGTCCATAGTCCACAGAGGGGAGGAGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp TCAGGCACATGCTCCTCCTCTCTGTGGACTATGGGCTCCGGTGCATaGCCCTCATCTCTGTGGACTATGGGCTCAGGCGCATGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGTCSSSLWTMGSGA*PSSLWTMGSGACSS
Trigger: GGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCGGAGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCATGGCATGGAATGGTaGACAGAAACCAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCHGMEW*TETKPS
Trigger: GGAAGGCTTGGTTTCTGTCAACCATTCCATGCCATG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTGGGACCAGCCTCTCTaGCAATACTTCAGGAGCATA +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTRWDQPL*QYFRSI
Trigger: TATGCTCCTGAAGTATTGCAAGAGAGGCTGGTCCCA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp TCCGGTGCATGCCCCTCATCTCTGTGGACTATGGGCTCAGGCGCATaGTCCTCCCCTCTGTGGACTATGGACTCAAGCTCAGGCACATGC +
Preference number: 5 (lower is better)
Translates to: SGACPSSLWTMGSGA*SSPLWTMDSSSGTC
Trigger: GCATGTGCCTGAGCTTGAGTCCATAGTCCACAGAGGGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TCCTCTCTGTGGACTATGGGCTCCGGTGCATGCCCCTCATCTCTGTaGACTATGGGCTCAGGCGCATGCTCCTCCCCTCTGTGGACTATG +
Preference number: 5 (lower is better)
Translates to: SSLWTMGSGACPSSL*TMGSGACSSPLWTM
Trigger: CATAGTCCACAGAGGGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCGGAGCCCATAGTCCACAGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCACTCCTGCTTGGTCTaGCCCTCCTCATCCTCATCT +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMHSCLV*PSSSSS
Trigger: AGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCACGATACACTCCTGCTaGGTCTTGCCCTCCTCATCC +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCTIHSC*VLPSSS
Trigger: GGATGAGGAGGGCAAGACCAAGCAGGAGTGTATCGT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCGTTCCAGTTCTTCCTTaGCTCTTTCAAGGACCATGG +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCVPVLP*LFQGPW
Trigger: CCATGGTCCTTGAAAGAGCAAAGGAAGAACTGGAAC...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGAAAGGGGCCCAATATaGTCCTCTTCCTGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIERGPI*SSSCPC
Trigger: GCAAGGGCAGGAAGAGGACAATATTGGGCCCCTTTC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGACTTCTGATAACTGTTaGTGCTTCTCAGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTRTSDNC*CFSGSG
Trigger: CCCAGAGCCTGAGAAGCACAAACAGTTATCAGAAGT...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCCAGACACTGGTGCTTaGCTTGTTTCTTGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCPDTGA*LVSWFL
Trigger: CAGAAACCAAGAAACAAGCAAAGCACCAGTGTCTGG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCCTGTGGAACAGCCACTaGTTTCAACATCTGGTCACT +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCLWNSH*FQHLVT
Trigger: AGTGACCAGATGTTGAAACAAGTGGCTGTTCCACAG...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTATGGGCACAGGCCCAGGCGCATGCTCCTCCTCTCTGTGGACTATaGACTCAGGCTCAGGCGCATGCTCCTCCTCTCTTTGAACTATGG +
Preference number: 5 (lower is better)
Translates to: LWAQAQAHAPPLCGL*TQAQAHAPPLFELW
Trigger: CCATAGTTCAAAGAGAGGAGGAGCATGCGCCTGAGCCTGAGTCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGGGCCTGTGCCCATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTATGGACTCAAGCTCAGGCACATGCTCCTCCTCTCTGTGGACTATaGGCACAGGCCCAGGCGCATGCTCCTCCTCTCTGTGGACTATGG +
Preference number: 5 (lower is better)
Translates to: LWTQAQAHAPPLCGL*AQAQAHAPPLCGLW
Trigger: CCATAGTCCACAGAGAGGAGGAGCATGCGCCTGGGCCTGTGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCTTGAGTCCATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TGTGGACTATGGGCTCCGGTGCATGCCCCTCATCTCTGTGGACTATaGGCTCAGGCGCATGCTCCTCCCCTCTGTGGACTATGGACTCAA +
Preference number: 5 (lower is better)
Translates to: CGLWAPVHAPHLCGL*AQAHAPPLCGLWTQ
Trigger: TTGAGTCCATAGTCCACAGAGGGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCGGAGCCCATAGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp GAAGAGAATGAGCCCCGCTGCTGGTCTCTGCTCCCTTCTTCTGATTaGACCACTTGTTCGGATGAGATGGCCCAGGGAGGTGGGGCATGG +
Preference number: 5 (lower is better)
Translates to: EENEPRCWSLLPSSD*TTCSDEMAQGGGAW
Trigger: CCATGCCCCACCTCCCTGGGCCATCTCATCCGAACAAGTGGTCCAATCAGAAGAAGGGAGCAGAGACCAGCAGCGGGGCTCATTCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCATGCTCCTCCTCTCTTaGAACTATGGACTCAGGCGC +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCMLLLS*NYGLRR
Trigger: GCGCCTGAGTCCATAGTTCAAAGAGAGGAGGAGCAT...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCCTCGTGTTTGTCATTaGGCACCGTGGGTTTGGATG +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCPRVCH*APWVWM
Trigger: CATCCAAACCCACGGTGCCAAATGACAAACACGAGG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGGACAGATTTACTTaGGGTGAGTACTTCCACGTT +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCRDRFT*GEYFHV
Trigger: AACGTGGAAGTACTCACCCAAAGTAAATCTGTCCCT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCCCTTGTGATCACTGCTaGGCTCTTCCTTACGTGCAG +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIPCDHC*ALPYVQ
Trigger: CTGCACGTAAGGAAGAGCCAAGCAGTGATCACAAGG...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTCAGGGTTGACAGCCTaGGGGGTGGTGGGAAATATT +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETISGLTA*GVVGNI
Trigger: AATATTTCCCACCACCCCCAAGGCTGTCAACCCTGA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCTACATCCGGTGAAGTaGACAGCCATCACCCACACT +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCLHPVK*TAITHT
Trigger: AGTGTGGGTGATGGCTGTCAACTTCACCGGATGTAG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp AGGTGCAGAGTACATCTCCCAGGCTTCTCCAAGGCAAAGGCGGGATaGACGCCCTCGTTGAACCTGTGCCTCACGATGAAGAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RCRVHLPGFSKAKAG*TPSLNLCLTMKSSC
Trigger: ACAGCTGCTCTTCATCGTGAGGCACAGGTTCAACGAGGGCGTGCATCCCGCCTTTGCCTTGGAGAAGCCTGGGAGATGTACTCTGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TGTGAACTATGGGCTCAGGTGCATGCCCCTCATCTCTGTGGACTATaGGCTCAGGCACATGCTCCTCCTCTCTGTGGACTATGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: CELWAQVHAPHLCGL*AQAHAPPLCGLWAP
Trigger: CGGAGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCTGAGCCCATAGTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGAAGATCTGCTTGAGTaGGTCTCCCAGGTTATCCCA +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMEDLLE*VSQVIP
Trigger: TGGGATAACCTGGGAGACCAACTCAAGCAGATCTTC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGCAAGCTCTCTTACTTaGTCTTCTTCTGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIASSLT*SSSGLW
Trigger: CCAGAGCCCAGAAGAAGACAAAGTAAGAGAGCTTGC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGGACTGGTGAAACTGTaGAAAAGAGTGGGGACTGGA +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIGLVKL*KRVGTG
Trigger: TCCAGTCCCCACTCTTTTCAACAGTTTCACCAGTCC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTTCTTCTAACAGGGTaGCAGGATCAGAAAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLLLTG*QDQKGL
Trigger: GAGGCCTTTCTGATCCTGCAACCCTGTTAGAAGAAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCACAGTTGGAGCTAAATaGAGTTTGACATCCGCCTTT +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCTVGAK*SLTSAF
Trigger: AAAGGCGGATGTCAAACTCAATTTAGCTCCAACTGT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGAGGTGAGTGTGGTTTaGCCACTTCAGGCTCATTCT +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCEVSVV*PLQAHS
Trigger: AGAATGAGCCTGAAGTGGCAAAACCACACTCACCTC...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGAATGGAGGTGGCTCGTaGTCTTCTCTCTCTACCTCA +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMNGGGS*SSLSTS
Trigger: TGAGGTAGAGAGAGAAGACAACGAGCCACCTCCATT...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGCACTTAAACTGCCTTTaGATTCCACTGGCAGAATCA +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTRHLNCL*IPLAES
Trigger: TGATTCTGCCAGTGGAATCAAAAGGCAGTTTAAGTG...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAAAGAAGTCAGTGTTTaGGTGGCTTCCTCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCKEVSV*VASSED
Trigger: ATCTTCAGAGGAAGCCACCAAAACACTGACTTCTTT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CCAGAGTGTAGGTCTCGGTGGCCTCCGGGTTGGCAGGCCGCCATCTaGCAGTGGCAGTGTTCCAACACACAGTACAGTCTTCTACATGAA +
Preference number: 5 (lower is better)
Translates to: PECRSRWPPGWQAAI*QWQCSNTQYSLLHE
Trigger: TTCATGTAGAAGACTGTACTGTGTGTTGGAACACTGCCACTGTCAGATGGCGGCCTGCCAACCCGGAGGCCACCGAGACCTACACTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp GGCTTCTCCAAGGCAAAGGCGGGATGCACGCCCTCGTTGAACCTGTaGCTCACGATGAAGAGCAGCTGTCCACTCTCGGCGTTTATAAAC +
Preference number: 5 (lower is better)
Translates to: GFSKAKAGCTPSLNL*LTMKSSCPLSAFIN
Trigger: GTTTATAAACGCCGAGAGTGGACAGCTGCTCTTCATCGTGAGGCACAGGTTCAACGAGGGCGTGCATCCCGCCTTTGCCTTGGAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TCCTCTCTGTGGACTATGGATTCAGGCGCATGCTCCTCCTCTCTGTaGACTATGGGCTCAGGCGCATGCTCCTCCTCTCTGTGGACTATG +
Preference number: 5 (lower is better)
Translates to: SSLWTMDSGACSSSL*TMGSGACSSSLWTM
Trigger: CATAGTCCACAGAGAGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAATCCATAGTCCACAGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp AGGCACCCTTTAGAAGCAGAGGAGATGTGTGGCCAAGCTCTGGTGTaGAAGAGAATGAGCCCCGCTGCTGGTCTCTGCTCCCTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: RHPLEAEEMCGQALV*KRMSPAAGLCSLLL
Trigger: CAGAAGAAGGGAGCAGAGACCAGCAGCGGGGCTCATTCTCTTCCACACCAGAGCTTGGCCACACATCTCCTCTGCTTCTAAAGGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp ATCCTGCACAGGGGTATTGTGGAGCCTCTCTTCCCGGGACACAGATaGGACCAGCCTCTCTTGCAATACTTCAGGAGCATAGGTGGCACC +
Preference number: 5 (lower is better)
Translates to: ILHRGIVEPLFPGHR*DQPLLQYFRSIGGT
Trigger: GGTGCCACCTATGCTCCTGAAGTATTGCAAGAGAGGCTGGTCCCATCTGTGTCCCGGGAAGAGAGGCTCCACAATACCCCTGTGCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTTCATCAGCTGGCTGTaGTGGCATCATTTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIFISWL*WHHLWK
Trigger: CTTCCACAAATGATGCCACAACAGCCAGCTGATGAA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCACTGCAGAGACCTCATaGGATGAAGATAGCCCAACT +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETITAETS*DEDSPT
Trigger: AGTTGGGCTATCTTCATCCAATGAGGTCTCTGCAGT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCATTCAGACACAGAGGTaGAAATTGTTGGAACATCTG +
Preference number: 5 (lower is better)
Translates to: GPWLCSHADCGTRSSRQCIQTQR*KLLEHL
Trigger: CAGATGTTCCAACAATTTCAACCTCTGTGTCTGAAT...GCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTTCTTCTCTGCCAATaGTTTAACACCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLLLCQ*FNTQLW
Trigger: CCAGAGCTGGGTGTTAAACAATTGGCAGAGAAGAAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCTTTTCTTCCAGGCCTaGGCCTTGATCTTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCLFFQA*ALIFLS
Trigger: ACTCAAGAAGATCAAGGCCAAGGCCTGGAAGAAAAG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGTCCCGGCCAACAACTTaGTGCTGTTCTTCCAGATTT +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMSRPTT*CCSSRF
Trigger: AAATCTGGAAGAACAGCACAAAGTTGTTGGCCGGGA...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGACAGCAGCCTTTCATaGATTTCCTCAAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIDSSLS*ISSKEA
Trigger: GGCTTCCTTTGAGGAAATCAATGAAAGGCTGCTGTC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGGAGGGAGGTTAACCTaGAGCTGGAGTCCTTTAATT +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIGGRLT*SWSPLI
Trigger: AATTAAAGGACTCCAGCTCAAGGTTAACCTCCCTCC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CTGTGGACTATGGACTCAGGCTCAGGCACATGCTCCTCCTCTCTGTaGACTATGGGCTCAGGTGCATGCCCCTCATCTCTGTGGACTATG +
Preference number: 5 (lower is better)
Translates to: LWTMDSGSGTCSSSL*TMGSGACPSSLWTM
Trigger: CATAGTCCACAGAGATGAGGGGCATGCACCTGAGCCCATAGTTCACAGAGAGGAGGAGCATGTGCCTGAGCCTGAGTCCATAGTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp CCATGGAAAAGGAAGGGTCAGAGACGATACACTCCTGCTTGGTCTTaGCCTCCTCATCCTCATCTGATAACCTGGCGTCGGGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PWKRKGQRRYTPAWS*PPHPHLITWRRAPP
Trigger: AGGAGGAGCCCGACGCCAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTGTATCGTCTCTGACCCTTCCTTTTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp GGCAGAAGAGCTGGCTTCTGTGTCTTTCCCCATCTCTTCCATCAATaGTGGAAGTGCAGGTGGTGCAGGTGGACTGTGTTCTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GRRAGFCVFPHLFHQ*WKCRWCRWTVFCSP
Trigger: AGGGGAGCAGAACACAGTCCACCTGCACCACCTGCACTTCCAGCATTGATGGAAGAGATGGGGAAAGACACAGAAGCCAGCTCTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTGCCACCATGGAAAAGGAAGGGTCAGAGACGATACACTCCTGCTTaGTCTTGCCCTCCTCATCCTCATCTGATAACCTGGCGTCGGGCT +
Preference number: 5 (lower is better)
Translates to: LPPWKRKGQRRYTPA*SCPPHPHLITWRRA
Trigger: AGCCCGACGCCAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTGTATCGTCTCTGACCCTTCCTTTTCCATGGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp GATGTGTGGCCAAGCTCTGGTGTGGAAGAGAATGAGCCCCGCTGCTaGTCTCTGCTCCCTTCTTCTGATTGGACCACTTGTTCGGATGAG +
Preference number: 5 (lower is better)
Translates to: DVWPSSGVEENEPRC*SLLPSSDWTTCSDE
Trigger: CTCATCCGAACAAGTGGTCCAATCAGAAGAAGGGAGCAGAGACCAGCAGCGGGGCTCATTCTCTTCCACACCAGAGCTTGGCCACACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTGGCTGCTTGGCTCACTCTCCAGAACACAGCGGGTGTCCTGGAATaGAACTGCATAGCTCATCTTCTGGGTGACTGCTCTGACTTGCTC +
Preference number: 5 (lower is better)
Translates to: LAAWLTLQNTAGVLE*NCIAHLLGDCSDLL
Trigger: GAGCAAGTCAGAGCAGTCACCCAGAAGATGAGCTATGCAGTTCCATTCCAGGACACCCGCTGTGTTCTGGAGAGTGAGCCAAGCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGGCACCCGGTTTTCATTCTCAATATaGAGCACAGGGCTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LHEARGPWLCSHADCGTRFSFSI*STGLSE
Trigger: TTCAGAAAGCCCTGTGCTCAATATTGAGAATGAAAA...CCGGGTGCCGCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCCTGTTGTGGCATCATTaGTGGAAGGCTGAGATTTTC +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCLLWHH*WKAEIF
Trigger: GAAAATCTCAGCCTTCCACAAATGATGCCACAACAG...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGTTCTGACCCAGCAGTaGGTACTTCTGATAACTGTT +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIVLTQQ*VLLITV
Trigger: AACAGTTATCAGAAGTACCAACTGCTGGGTCAGAAC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGGGTTTTGGCATTTCTaGTCTAAGTCTGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMGFWHF*SKSVFT
Trigger: GGTGAAGACAGACTTAGACAAGAAATGCCAAAACCC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCACGGGGACATTCAGATaGACATCTGGACTTGCATTT +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETITGTFR*TSGLAF
Trigger: AAATGCAAGTCCAGATGTCAATCTGAATGTCCCCGT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCTTCTGGGAAAGACTCTaGTACGGGGACATTCAGATT +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCFWERL*YGDIQI
Trigger: AATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAA...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp TTCTGGGTGACTGCTCTGACTTGCTCTGTAATGGGAGCTTTCTGCTaGATTGCCGCCTCATCAAGGGTCTCCATGTGGCCTGTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: FWVTALTCSVMGAFC*IAASSRVSMWPVGS
Trigger: AGAACCCACAGGCCACATGGAGACCCTTGATGAGGCGGCAATGCAGCAGAAAGCTCCCATTACAGAGCAAGTCAGAGCAGTCACCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp ATCTTCTGGGTGACTGCTCTGACTTGCTCTGTAATGGGAGCTTTCTaGTGCATTGCCGCCTCATCAAGGGTCTCCATGTGGCCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: IFWVTALTCSVMGAF*CIAASSRVSMWPVG
Trigger: ACCCACAGGCCACATGGAGACCCTTGATGAGGCGGCAATGCAGCAGAAAGCTCCCATTACAGAGCAAGTCAGAGCAGTCACCCAGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TCCTCTCTGTGGACTATGGGCTCAGGCGCATGCTCCTCCTCTCTGTaGACTATGGGCTCAGATGAGGTCACGTATTCAGACGCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SSLWTMGSGACSSSL*TMGSDEVTYSDACS
Trigger: AGAACAAGCGTCTGAATACGTGACCTCATCTGAGCCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp AGAAGAGCTGGCTTCTGTGTCTTTCCCCATCTCTTCCATCAATGCTaGAAGTGCAGGTGGTGCAGGTGGACTGTGTTCTGCTCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: RRAGFCVFPHLFHQC*KCRWCRWTVFCSPL
Trigger: GAGAGGGGAGCAGAACACAGTCCACCTGCACCACCTGCACTTCCAGCATTGATGGAAGAGATGGGGAAAGACACAGAAGCCAGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTTTCTGCTGCATTGCCGCCTCATCAAGGGTCTCCATGTGGCCTGTaGGTTCTCCTTCCCGGCCAACAACTTTGTGCTGTTCTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: LSAALPPHQGSPCGL*VLLPGQQLCAVLPD
Trigger: ATCTGGAAGAACAGCACAAAGTTGTTGGCCGGGAAGGAGAACCCACAGGCCACATGGAGACCCTTGATGAGGCGGCAATGCAGCAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCACACTGGTGCTTTGCTaGTTTCTTGGTTTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETITLVLC*FLGFWF
Trigger: AAACCAGAAACCAAGAAACAAGCAAAGCACCAGTGT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp GCAAATGCAGAATCAGGGGAAAGGGGCCCAATATTGTCCTCTTCCTaGCCTTGCTCTGATAGACCTGTGGGTGAGGAGGCACCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: ANAESGERGPILSSS*PCSDRPVGEEAPFR
Trigger: TCTAAAGGGTGCCTCCTCACCCACAGGTCTATCAGAGCAAGGGCAGGAAGAGGACAATATTGGGCCCCTTTCCCCTGATTCTGCATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp ATCTGTTCATCTGCACTTGTTAGAGTGAGAGGTGCTGTGGGCTCCTaGTCTGGCTTAAGCACACAGGTTGACTCGGGTGAAACTGAGGGC +
Preference number: 5 (lower is better)
Translates to: ICSSALVRVRGAVGS*SGLSTQVDSGETEG
Trigger: GCCCTCAGTTTCACCCGAGTCAACCTGTGTGCTTAAGCCAGAGCAGGAGCCCACAGCACCTCTCACTCTAACAAGTGCAGATGAACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGGACCATCTTCTTGGTTaGTCAGAACATCTTGTGATT +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMDHLLG*SEHLVI
Trigger: AATCACAAGATGTTCTGACAAACCAAGAAGATGGTC...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCGGCATACGTTTTCTTTaGCTCTTCGTGACTAAACAA +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETIGIRFL*LFVTKQ
Trigger: TTGTTTAGTCACGAAGAGCAAAAGAAAACGTATGCC...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CCTCCACTCACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTTCAGGCTCATTCTTaGACAACATTCTCTGTTCTA +
Preference number: 5 (lower is better)
Translates to: PPLTHCSMRHGVPGSALMLQAHS*TTFSVL
Trigger: TAGAACAGAGAATGTTGTCAAAGAATGAGCCTGAAG...CATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTGAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCTCTGTCATCTGGTTTTaGGATAGCCAAAGACTTTTG +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETISVIWF*DSQRLL
Trigger: CAAAAGTCTTTGGCTATCCAAAAACCAGATGACAGA...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp TTCAGATGTGTGATCTGTATCCAGTGGAGCAGCCCCAAGTTTCTCTaGCATCAGATCAGTGCTCTCAGAGGACTCCAGCTGCCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: FRCVICIQWSSPKFL*HQISALRGLQLPSS
Trigger: GGAACTGGGCAGCTGGAGTCCTCTGAGAGCACTGATCTGATGTCAGAGAAACTTGGGGCTGCTCCACTGGATACAGATCACACATCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GATTTCTTGCTTCTCTGCCAGGCCCCTCTTCCCTGCCAAGGAAAATaGTCTAGTTTCCCAGCCATCCTTCTCCTCTGTTGGACGTTCCAC +
Preference number: 5 (lower is better)
Translates to: DFLLLCQAPLPCQGK*SSFPAILLLCWTFH
Trigger: GTGGAACGTCCAACAGAGGAGAAGGATGGCTGGGAAACTAGATCATTTTCCTTGGCAGGGAAGAGGGGCCTGGCAGAGAAGCAAGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp AACATTTGGGAGCCGAGGCTCTGGTGTCTGATCCTGCGATTTGTGTaGTGTCGCTTCTTGAGAATCCAGCACAGCTTTTTCCCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: NIWEPRLWCLILRFV*CRFLRIQHSFFPSD
Trigger: GTCGGAAGGGAAAAAGCTGTGCTGGATTCTCAAGAAGCGACAGCACACAAATCGCAGGATCAGACACCAGAGCCTCGGCTCCCAAATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp CCTGACAGGAAACTCCCCGGCACTGGAGAAGATGTCTCCTCTGCTTaGCTGTTCATCTCATGTCTGAGGGCCAGTAATGTTGGAGCTAAA +
Preference number: 5 (lower is better)
Translates to: PDRKLPGTGEDVSSA*LFISCLRASNVGAK
Trigger: TTTAGCTCCAACATTACTGGCCCTCAGACATGAGATGAACAGGCAAGCAGAGGAGACATCTTCTCCAGTGCCGGGGAGTTTCCTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp GCTTGGCTCACTCTCCAGAACACAGCGGGTGTCCTGGAATGGAACTaGATAGCTCATCTTCTGGGTGACTGCTCTGACTTGCTCTGTAAT +
Preference number: 5 (lower is better)
Translates to: AWLTLQNTAGVLEWN*IAHLLGDCSDLLCN
Trigger: ATTACAGAGCAAGTCAGAGCAGTCACCCAGAAGATGAGCTATGCAGTTCCATTCCAGGACACCCGCTGTGTTCTGGAGAGTGAGCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp CTCTTGTACGGGGACATTCAGATTGACATCTGGACTTGCATTTCCTaGCTCATTACCCTGGCTGCTTGGCTCACTCTCCAGAACACAGCG +
Preference number: 5 (lower is better)
Translates to: LLYGDIQIDIWTCIS*LITLAAWLTLQNTA
Trigger: CGCTGTGTTCTGGAGAGTGAGCCAAGCAGCCAGGGTAATGAGGCAGGAAATGCAAGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTCCAGTACACTGCAATTGTTGTGCTGGTAGCAGAGCTTGGTTCCTaGGGTTCTAGTCTGGGAGGCTGTGGAACAGCCACTTGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: LQYTAIVVLVAELGS*GSSLGGCGTATCFN
Trigger: GTTGAAACAAGTGGCTGTTCCACAGCCTCCCAGACTAGAACCCCAGGAACCAAGCTCTGCTACCAGCACAACAATTGCAGTGTACTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp CACACACTGCTCCATGAGGCACGGGGTCCCTGGCTCTGCTCTCATGCTGACTGCGCTGAGATTTTCTTCTaGATCAGCTGTATCATTTCT +
Preference number: 5 (lower is better)
Translates to: HTLLHEARGPWLCSHADCAEIFF*ISCIIS
Trigger: AGAAATGATACAGCTGATCAAGAAGAAAATCTCAGC...GCAGTCAGCATGAGAGCAGAGCCAGGGACCCCGTGCCTCATGGAGCAGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp ATGCTGACTGCGGCACCCGGAGCTCCCGTCAGTGCAGGTGTGTGGGAGACTATCAGTCGTTTCTCATTTTaGCTACACTTTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: MLTAAPGAPVSAGVWETISRFSF*LHFSSM
Trigger: CATTGAGGAAAAGTGTAGCAAAAATGAGAAACGACT...GATAGTCTCCCACACACCTGCACTGACGGGAGCTCCGGGTGCCGCAGTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GATCTGCTTGAGTTGGTCTCCCAGGTTATCCCACTGTCTTCACGTTaGACTGCCACCATGGAAAAGGAAGGGTCAGAGACGATACACTCC +
Preference number: 5 (lower is better)
Translates to: DLLELVSQVIPLSSR*TATMEKEGSETIHS
Trigger: GGAGTGTATCGTCTCTGACCCTTCCTTTTCCATGGTGGCAGTTCAACGTGAAGACAGTGGGATAACCTGGGAGACCAACTCAAGCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp TGCTCTGGCTTAAGCACACAGGTTGACTCGGGTGAAACTGAGGGCTaGGAGGTGGGCAAAACGGATGTGGTTTCTTCCTTTACCACTGAT +
Preference number: 5 (lower is better)
Translates to: CSGLSTQVDSGETEG*EVGKTDVVSSFTTD
Trigger: ATCAGTGGTAAAGGAAGAAACCACATCCGTTTTGCCCACCTCTCAGCCCTCAGTTTCACCCGAGTCAACCTGTGTGCTTAAGCCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp TATCTCCTCGTGTTTGTCATTTGGCACCGTGGGTTTGGATGTGGGTaGCACTTGCAATGGAGGTGGCTCGTTGTCTTCTCTCTCTACCTC +
Preference number: 5 (lower is better)
Translates to: YLLVFVIWHRGFGCG*HLQWRWLVVFSLYL
Trigger: GAGGTAGAGAGAGAAGACAACGAGCCACCTCCATTGCAAGTGTCACCCACATCCAAACCCACGGTGCCAAATGACAAACACGAGGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp TTCCCGAGGTCTGACTTTCTCCTGAAGCCCAAGGAGTGGAAGATCTaGTTGAGTTGGTCTCCCAGGTTATCCCACTGTCTTCACGTTGAA +
Preference number: 5 (lower is better)
Translates to: FPRSDFLLKPKEWKI*LSWSPRLSHCLHVE
Trigger: TTCAACGTGAAGACAGTGGGATAACCTGGGAGACCAACTCAAGCAGATCTTCCACTCCTTGGGCTTCAGGAGAAAGTCAGACCTCGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp CTGTATCCAGTGGAGCAGCCCCAAGTTTCTCTGACATCAGATCAGTaGTCTCAGAGGACTCCAGCTGCCCAGTTCCTGGTTTTCTATCTT +
Preference number: 5 (lower is better)
Translates to: LYPVEQPQVSLTSDQ*SQRTPAAQFLVFYL
Trigger: AAGATAGAAAACCAGGAACTGGGCAGCTGGAGTCCTCTGAGAGCACTGATCTGATGTCAGAGAAACTTGGGGCTGCTCCACTGGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp GACCAGCCTCTCTTGCAATACTTCAGGAGCATAGGTGGCACCTGCTaGAGATTCTTCTTCTGGGAAAGACTCTTGTACGGGGACATTCAG +
Preference number: 5 (lower is better)
Translates to: DQPLLQYFRSIGGTC*RFFFWERLLYGDIQ
Trigger: CTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGCAGCAGGTGCCACCTATGCTCCTGAAGTATTGCAAGAGAGGCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp TCCTTAGCCGTGTCCATGCTCTGCAGGAAGTGGACCATCTGGTCATaGAGGAACTCCATCTTCTTCTTCTTCACTTCCTCGAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: SLAVSMLCRKWTIWS*RNSIFFFFTSSKLC
Trigger: ACAGAGCTTCGAGGAAGTGAAGAAGAAGAAGATGGAGTTCCTGCATGACCAGATGGTCCACTTCCTGCAGAGCATGGACACGGCTAAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TCTGACTTTCTCCTGAAGCCCAAGGAGTGGAAGATCTGCTTGAGTTaGTCTCCCAGGTTATCCCACTGTCTTCACGTTGAACTGCCACCA +
Preference number: 5 (lower is better)
Translates to: SDFLLKPKEWKICLS*SPRLSHCLHVELPP
Trigger: TGGTGGCAGTTCAACGTGAAGACAGTGGGATAACCTGGGAGACCAACTCAAGCAGATCTTCCACTCCTTGGGCTTCAGGAGAAAGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp ACACAGATGGGACCAGCCTCTCTTGCAATACTTCAGGAGCATAGGTaGCACCTGCTGCAGATTCTTCTTCTGGGAAAGACTCTTGTACGG +
Preference number: 5 (lower is better)
Translates to: TQMGPASLAILQEHR*HLLQILLLGKTLVR
Trigger: CCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGCAGCAGGTGCCACCTATGCTCCTGAAGTATTGCAAGAGAGGCTGGTCCCATCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GGAGAAGTCAGAGCTGACCCTTCCAAACTACATATTCCCGAGGTCTaGCTTTCTCCTGAAGCCCAAGGAGTGGAAGATCTGCTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: GEVRADPSKLHIPEV*LSPEAQGVEDLLEL
Trigger: CAACTCAAGCAGATCTTCCACTCCTTGGGCTTCAGGAGAAAGTCAGACCTCGGGAATATGTAGTTTGGAAGGGTCAGCTCTGACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GTTGGTGGTGGTACCAAATCTTCAGCCTCAGGCTCCAAAGATGCCTaGGTTTTCTCCTGCTGTGCCAGGATGAGATATTCAGACACAGAG +
Preference number: 5 (lower is better)
Translates to: VGGGTKSSASGSKDA*VFSCCARMRYSDTE
Trigger: CTCTGTGTCTGAATATCTCATCCTGGCACAGCAGGAGAAAACTCAGGCATCTTTGGAGCCTGAGGCTGAAGATTTGGTACCACCACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GAGTTTGACATCCGCCTTTGGCTCATCTCCCAAGTCAGACAAAACTaGATATTTCATCCCAGACCCTGGAACATTTGGGAGCCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: EFDIRLWLISQVRQN*IFHPRPWNIWEPRL
Trigger: GAGCCTCGGCTCCCAAATGTTCCAGGGTCTGGGATGAAATATTCAGTTTTGTCTGACTTGGGAGATGAGCCAAAGGCGGATGTCAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp TCAGAGGACTCCAGCTGCCCAGTTCCTGGTTTTCTATCTTCATGCTaGTTGACTAAGCCATCTGGCTTTTCCAGCATCCAGGTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SEDSSCPVPGFLSSC*LTKPSGFSSIQVLS
Trigger: GGACAACACCTGGATGCTGGAAAAGCCAGATGGCTTAGTCAATCAGCATGAAGATAGAAAACCAGGAACTGGGCAGCTGGAGTCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CCTTTGGGCTCCTCGGCCAGTTTAACTGTGACCTCAGGTAATGAATaGACCGCTGGCTTCTCGGCTATATTAACCTCAGCAGGAACTGTA +
Preference number: 5 (lower is better)
Translates to: PLGSSASLTVTSGNE*TAGFSAILTSAGTV
Trigger: TACAGTTCCTGCTGAGGTTAATATAGCCGAGAAGCCAGCGGTTCATTCATTACCTGAGGTCACAGTTAAACTGGCCGAGGAGCCCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp ACAGCACTTATAGCCGTGTCGAGTGCTGAAACCTCGTGGTCTTTGTaGATGTCCAGTGCCTTGTCCATTTCAGAGACCAGGCTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: TALIAVSSAETSWSL*MSSALSISETRLLQ
Trigger: CTGCAAAAGCCTGGTCTCTGAAATGGACAAGGCACTGGACATTCACAAAGACCACGAGGTTTCAGCACTCGACACGGCTATAAGTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp ACTGGTTGGTGGTGGTACCAAATCTTCAGCCTCAGGCTCCAAAGATaGCTGAGTTTTCTCCTGCTGTGCCAGGATGAGATATTCAGACAC +
Preference number: 5 (lower is better)
Translates to: TGWWWYQIFSLRLQR*LSFLLLCQDEIFRH
Trigger: GTGTCTGAATATCTCATCCTGGCACAGCAGGAGAAAACTCAGGCATCTTTGGAGCCTGAGGCTGAAGATTTGGTACCACCACCAACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp GCGAAACTTCCACTTCCTAGACTCTCATCTTCCGATAGAACTGCCTaGCTCAGTGCTGCTGGGGGAAGTAGCCCAATATCTTCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: AKLPLPRLSSSDRTA*LSAAGGSSPISSFS
Trigger: TGAGAAAGAAGATATTGGGCTACTTCCCCCAGCAGCACTGAGCCAGGCAGTTCTATCGGAAGATGAGAGTCTAGGAAGTGGAAGTTTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp AATCAGGAGACCTTGTTATCTCCTCGTGTTTGTCATTTGGCACCGTaGGTTTGGATGTGGGTGACACTTGCAATGGAGGTGGCTCGTTGT +
Preference number: 5 (lower is better)
Translates to: NQETLLSPRVCHLAP*VWMWVTLAMEVARC
Trigger: ACAACGAGCCACCTCCATTGCAAGTGTCACCCACATCCAAACCCACGGTGCCAAATGACAAACACGAGGAGATAACAAGGTCTCCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GGAGAAGAGACCTCTGGCTTCTGGCGTCTTTGGCTCTCAGTAATATaGAGAGGAGCCATGTTTTGGGCTTCTTCCATACCCACTTTCTCA +
Preference number: 5 (lower is better)
Translates to: GEETSGFWRLWLSVI*RGAMFWASSIPTFS
Trigger: TGAGAAAGTGGGTATGGAAGAAGCCCAAAACATGGCTCCTCTTCATATTACTGAGAGCCAAAGACGCCAGAAGCCAGAGGTCTCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp TGCAGAAGAGGAAGCTGCTATTGTAACTGCTGGCAGACTACTCTTTaGATCTCTCTTCTCCCATCCACTGGTTGGTGGTGGTACCAAATC +
Preference number: 5 (lower is better)
Translates to: CRRGSCYCNCWQTTL*ISLLPSTGWWWYQI
Trigger: GATTTGGTACCACCACCAACCAGTGGATGGGAGAAGAGAGATGCAAAGAGTAGTCTGCCAGCAGTTACAATAGCAGCTTCCTCTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TTGTTATCTCCTCGTGTTTGTCATTTGGCACCGTGGGTTTGGATGTaGGTGACACTTGCAATGGAGGTGGCTCGTTGTCTTCTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: LLSPRVCHLAPWVWM*VTLAMEVARCLLSL
Trigger: TAGAGAGAGAAGACAACGAGCCACCTCCATTGCAAGTGTCACCCACATCCAAACCCACGGTGCCAAATGACAAACACGAGGAGATAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTCCAAATTCTCCTTCTTCTCTGCCAATTGTTTAACACCCAGCTCTaGCTTATCTGCAGAAGAGCTGCTCTCATCAGGCACCTCAACAGC +
Preference number: 5 (lower is better)
Translates to: LQILLLLCQLFNTQL*LICRRAALIRHLNS
Trigger: GCTGTTGAGGTGCCTGATGAGAGCAGCTCTTCTGCAGATAAGCCAGAGCTGGGTGTTAAACAATTGGCAGAGAAGAAGGAGAATTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TTCTCCCTTCCTCAGAATCATCTACAGCCTTTGACTGAACCCTTCTaGGTTCCTGAGATAGCTTCTCACCAGACACTGGTGCTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: FSLPQNHLQPLTEPF*VPEIASHQTLVLCL
Trigger: CAAGCAAAGCACCAGTGTCTGGTGAGAAGCTATCTCAGGAACCCAGAAGGGTTCAGTCAAAGGCTGTAGATGATTCTGAGGAAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TTCTTCTGGGAAAGACTCTTGTACGGGGACATTCAGATTGACATCTaGACTTGCATTTCCTGCCTCATTACCCTGGCTGCTTGGCTCACT +
Preference number: 5 (lower is better)
Translates to: FFWERLLYGDIQIDI*TCISCLITLAAWLT
Trigger: AGTGAGCCAAGCAGCCAGGGTAATGAGGCAGGAAATGCAAGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TGGGTGAGGATTCTGAACCTGGCTCTTCTGGTAAGATGGCTTGACTaGCTGCTTCCTGATTCAGAGAGCCAACAAAGTCATACTCATCCT +
Preference number: 5 (lower is better)
Translates to: WVRILNLALLVRWLD*LLPDSESQQSHTHP
Trigger: AGGATGAGTATGACTTTGTTGGCTCTCTGAATCAGGAAGCAGCCAGTCAAGCCATCTTACCAGAAGAGCCAGGTTCAGAATCCTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGATCTCCCATCCACTGGTaGGTGGTGGTACCAAATCTT +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRSPIHW*VVVPNL
Trigger: AAGATTTGGTACCACCACCAACCAGTGGATGGGAGA...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACTGGCAGACTACTCTTaGCATCTCTCTTCTCCCATC +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRLADYS*HLSSPI
Trigger: GATGGGAGAAGAGAGATGCAAAGAGTAGTCTGCCAG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAAAGAGGAGCCATGTTTaGGGCTTCTTCCATACCCAC +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRKRSHV*GFFHTH
Trigger: GTGGGTATGGAAGAAGCCCAAAACATGGCTCCTCTT...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CAGATTCTTCTTCTGGGAAAGACTCTTGTACGGGGACATTCAGATTaGCATCTGGACTTGCATTTCCTGCCTCATTACCCTGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QILLLGKTLVRGHSD*HLDLHFLPHYPGCL
Trigger: CAAGCAGCCAGGGTAATGAGGCAGGAAATGCAAGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CTCGTGAGCTCCTGTTCCCTGATGTGCTCAAAGGATTCTGATCCTTaGGATAACACTTCTTTGGGTGAGGATTCTGAACCTGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LVSSCSLMCSKDSDP*DNTSLGEDSEPGSS
Trigger: AGAAGAGCCAGGTTCAGAATCCTCACCCAAAGAAGTGTTATCTCAAGGATCAGAATCCTTTGAGCACATCAGGGAACAGGAGCTCACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp GTCTTCTACATGAATCACAGCTGTGGACGGTGCTGTTCTAAAAATTaGTCTTTCACTGGGCAGGCTACATCCGGTGAAGTTGACAGCCAT +
Preference number: 5 (lower is better)
Translates to: VFYMNHSCGRCCSKN*SFTGQATSGEVDSH
Trigger: ATGGCTGTCAACTTCACCGGATGTAGCCTGCCCAGTGAAAGAGCAATTTTTAGAACAGCACCGTCCACAGCTGTGATTCATGTAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTCCAGGGTGGAGCAAGCTCTCTTACTTTGTCTTCTTCTGGGCTCTaGGCTAATTTCCTTTGGGGAACTATATTAGAACCACCATTGCTC +
Preference number: 5 (lower is better)
Translates to: LQGGASSLTLSSSGL*ANFLWGTILEPPLL
Trigger: GAGCAATGGTGGTTCTAATATAGTTCCCCAAAGGAAATTAGCCCAGAGCCCAGAAGAAGACAAAGTAAGAGAGCTTGCTCCACCCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp ATCATTGATGCTGGTTCCTCTGAGTTCATCCTTGTGAAGGCGGACTaGGCTGATTTGGGCTTCTGTGGCATTCTATCTACTACGTCAGAT +
Preference number: 5 (lower is better)
Translates to: IIDAGSSEFILVKAD*ADLGFCGILSTTSD
Trigger: ATCTGACGTAGTAGATAGAATGCCACAGAAGCCCAAATCAGCCCAGTCCGCCTTCACAAGGATGAACTCAGAGGAACCAGCATCAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CAATACTTCAGGAGCATAGGTGGCACCTGCTGCAGATTCTTCTTCTaGGAAAGACTCTTGTACGGGGACATTCAGATTGACATCTGGACT +
Preference number: 5 (lower is better)
Translates to: QYFRSIGGTCCRFFF*ERLLYGDIQIDIWT
Trigger: AGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGCAGCAGGTGCCACCTATGCTCCTGAAGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGTTGTCACAAATGGCTaGGGTTGCTCCAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRVVTNG*GCSKFS
Trigger: GGAGAATTTGGAGCAACCCAAGCCATTTGTGACAAC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAACTGAGTATAGTTACTaGCTGCTGAAGAGGGCGGTT +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRTEYSY*LLKRAV
Trigger: AACCGCCCTCTTCAGCAGCAAGTAACTATACTCAGT...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGAAAGGCCAGCTGGCTaGCTGGTTACTGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRERPAG*LVTENS
Trigger: AGAATTTTCAGTAACCAGCAAGCCAGCTGGCCTTTC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GCTGGCTGTTGTGGCATCATTTGTGGAAGGCTGAGATTTTCTTCTTaGTCAGCTGTATCATTTCTGGCACTGGAGGGAAATGCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: AGCCGIICGRLRFSS*SAVSFLALEGNACS
Trigger: AGAACACGCATTTCCCTCCAGTGCCAGAAATGATACAGCTGATCAAGAAGAAAATCTCAGCCTTCCACAAATGATGCCACAACAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp TGGGCTTCTTCCATACCCACTTTCTCACCCATAGGGGAACAAGGATaGATTCCAGGATGTTTGTCACCAACTGAAGTAGCTAAGCTTTCG +
Preference number: 5 (lower is better)
Translates to: WASSIPTFSPIGEQG*IPGCLSPTEVAKLS
Trigger: CGAAAGCTTAGCTACTTCAGTTGGTGACAAACATCCTGGAATTCATCCTTGTTCCCCTATGGGTGAGAAAGTGGGTATGGAAGAAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GAAGAGGGCGGTTCGTTTCTGTGCACATCTTCCACAGCTTCCAAGTaGTGCTTTGAAATAAGAACAGACTGTTTCAGCATCTCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: EEGGSFLCTSSTASK*CFEIRTDCFSISSV
Trigger: CACGGAAGAGATGCTGAAACAGTCTGTTCTTATTTCAAAGCATCACTTGGAAGCTGTGGAAGATGTGCACAGAAACGAACCGCCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp CCCTTCTGGGTTCCTGAGATAGCTTCTCACCAGACACTGGTGCTTTaGTTGTTTCTTGGTTTCTGGTTTCAGATGTGTGATCTGTATCCA +
Preference number: 5 (lower is better)
Translates to: PFWVPEIASHQTLVL*LFLGFWFQMCDLYP
Trigger: TGGATACAGATCACACATCTGAAACCAGAAACCAAGAAACAAGCAAAGCACCAGTGTCTGGTGAGAAGCTATCTCAGGAACCCAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp CTTTGTGAATGTCCAGTGCCTTGTCCATTTCAGAGACCAGGCTTTTaGAGGTGTAGCAGTAAGATTCAGCCTGAGTCTTTTTCGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LCECPVPCPFQRPGF*RCSSKIQPESFSVP
Trigger: AGGAACCGAAAAAGACTCAGGCTGAATCTTACTGCTACACCTGCAAAAGCCTGGTCTCTGAAATGGACAAGGCACTGGACATTCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp CTTGTGCATTCTGTTCCAGTTCTTCCTTTGCTCTTTCAAGGACCATaGTTGCTGGAATGCTTGGTGGCTCCATTCTGTGGGTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: LVHSVPVLPLLFQGP*LLECLVAPFCGSLI
Trigger: AATCAAAGACCCACAGAATGGAGCCACCAAGCATTCCAGCAACCATGGTCCTTGAAAGAGCAAAGGAAGAACTGGAACAGAATGCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TTCCTTACGTGCAGAAATATTCCACATAGACGGAGAAGAGACCTCTaGCTTCTGGCGTCTTTGGCTCTCAGTAATATGAAGAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: FLTCRNIPHRRRRDL*LLASLALSNMKRSH
Trigger: ATGGCTCCTCTTCATATTACTGAGAGCCAAAGACGCCAGAAGCCAGAGGTCTCTTCTCCGTCTATGTGGAATATTTCTGCACGTAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TTCGGTTCCTTTTGTGTCTTAGCGGTCACTGATTCTCTTGCTGATTaGTCTTCTGTCCTGTCCCACACTTCCTGTGAAGCAGACATTCTT +
Preference number: 5 (lower is better)
Translates to: FGSFCVLAVTDSLAD*SSVLSHTSCEADIL
Trigger: AAGAATGTCTGCTTCACAGGAAGTGTGGGACAGGACAGAAGACCAATCAGCAAGAGAATCAGTGACCGCTAAGACACAAAAGGAACCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAAGTTCCCTGGTTATTTaGGACTCCTGTTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRSSLVI*DSCFTS
Trigger: GGAAGTGAAACAGGAGTCCAAAATAACCAGGGAACT...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGGGAGCCATGATTTCTaGCTTCTCTGCCAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNGSHDF*LLCQAP
Trigger: AGGGGCCTGGCAGAGAAGCAAGAAATCATGGCTCCC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GGAACATTTAAATTGGAATCGGCATACGTTTTCTTTTGCTCTTCGTaGCTAAACAATGAGGTCCTGGACCCTTTGGAGAGGGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: GTFKLESAYVFFCSS*LNNEVLDPLERAPL
Trigger: GAGAGGTGCCCTCTCCAAAGGGTCCAGGACCTCATTGTTTAGTCACGAAGAGCAAAAGAAAACGTATGCCGATTCCAATTTAAATGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp AGAGGTCATAGCTGGGGAATAAGACTCACGTTCCTCGTCGTCCTCTaGAAAGACTGCAGGTTCATTGCTAGATTTCACATCAGATACAGA +
Preference number: 5 (lower is better)
Translates to: RGHSWGIRLTFLVVL*KDCRFIARFHIRYR
Trigger: TCTGTATCTGATGTGAAATCTAGCAATGAACCTGCAGTCTTTTCAGAGGACGACGAGGAACGTGAGTCTTATTCCCCAGCTATGACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp TATTTCTTGATCATCCTGAGGCTCCTCTACACAGTATACCTGGAATaGGTCCACAACATCCTCCTTGTTCACGCTCCAGTACACTGCAAT +
Preference number: 5 (lower is better)
Translates to: YFLIILRLLYTVYLE*VHNILLVHAPVHCN
Trigger: ATTGCAGTGTACTGGAGCGTGAACAAGGAGGATGTTGTGGACTCATTCCAGGTATACTGTGTAGAGGAGCCTCAGGATGATCAAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGAGCGTTCCTAAATGCTTaGTTTCATCAGTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRAFLNA*FHQSCL
Trigger: CAGACATGACTGATGAAACAAAGCATTTAGGAACGC...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGATCAGGAACTTCTAACTaGCTCTTCTGCGTTTTATGG +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRSGTSN*LFCVLW
Trigger: CCATAAAACGCAGAAGAGCAAGTTAGAAGTTCCTGA...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGATTGGCCTTGATCTTCTaGAGTTACAGTTTCGTCATG +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRLALIF*SYSFVM
Trigger: CATGACGAAACTGTAACTCAAGAAGATCAAGGCCAA...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TCCCGTCAGTGCAGGTGTGTGGGAGACTATCTAAATAATGCACATTGCCTGAGACAGTTCATTTATTTCTaGATCATCCTGAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SRQCRCVGDYLNNAHCLRQFIYF*IILRLL
Trigger: GAGGAGCCTCAGGATGATCAAGAAATAAATGAACTG...TCTCAGGCAATGTGCATTATTTAGATAGTCTCCCACACACCTGCACTGACGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GCACTGGAGAAGATGTCTCCTCTGCTTGCCTGTTCATCTCATGTCTaGGGGCCAGTAATGTTGGAGCTAAATCATCTGAAACTACATTTT +
Preference number: 5 (lower is better)
Translates to: ALEKMSPLLACSSHV*GPVMLELNHLKLHF
Trigger: AAAATGTAGTTTCAGATGATTTAGCTCCAACATTACTGGCCCTCAGACATGAGATGAACAGGCAAGCAGAGGAGACATCTTCTCCAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp GGCATTCTATCTACTACGTCAGATGACGAGAGCCATGTTTCCTTGTaGTCACTGCTTGGCTCTTCCTTACGTGCAGAAATATTCCACATA +
Preference number: 5 (lower is better)
Translates to: GILSTTSDDESHVSL*SLLGSSLRAEIFHI
Trigger: TATGTGGAATATTTCTGCACGTAAGGAAGAGCCAAGCAGTGATCACAAGGAAACATGGCTCTCGTCATCTGACGTAGTAGATAGAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp ACAGAAGTTCCTAAAACAAGAGTTTGTGGTTCTACAGCTGACGGCTaGGTTGGCGGCGTTCCTAAATGCTTTGTTTCATCAGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: TEVPKTRVCGSTADG*VGGVPKCFVSSVMS
Trigger: AGACATGACTGATGAAACAAAGCATTTAGGAACGCCGCCAACTCAGCCGTCAGCTGTAGAACCACAAACTCTTGTTTTAGGAACTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CGTGTAGTCTTTAGATGTCTGGAAAGTGTGGACTGTGGGCCTGTCTaGCCATGTTTCTTGTTTCTTCACTGTATGTTCTACAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: RVVFRCLESVDCGPV*PCFLFLHCMFYRSS
Trigger: GGAACTTCTGTAGAACATACAGTGAAGAAACAAGAAACATGGTCAGACAGGCCCACAGTCCACACTTTCCAGACATCTAAAGACTACACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CATCTGACAGTGGCAGTGTTCCAACACACAGTACAGTCTTCTACATaGATCACAGCTGTGGACGGTGCTGTTCTAAAAATTGCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: HLTVAVFQHTVQSST*ITAVDGAVLKIALS
Trigger: TGAAAGAGCAATTTTTAGAACAGCACCGTCCACAGCTGTGATTCATGTAGAAGACTGTACTGTGTGTTGGAACACTGCCACTGTCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACGTTGAGGTGTGGCTTTaGCTTTCACAGCAGGGACAG +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNVEVWL*LSQQGQ
Trigger: CTGTCCCTGCTGTGAAAGCAAAAGCCACACCTCAAC...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACCTTCTCAGATGGCTTTaGTGTCACCTCTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNLLRWL*CHLWGL
Trigger: GAGACCCCAGAGGTGACACAAAAGCCATCTGAGAAG...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACAGCCATCACCCACACTaGGTAACATCGATCGGGTTC +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSHHPH*VTSIGF
Trigger: GAACCCGATCGATGTTACCAAGTGTGGGTGATGGCT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp AAATGTGAGTTTTTCTTTAAGGTCTTGACTTATGCTGGATTTAACTaGAACGCCTTTGGGCTCCTCGGCCAGTTTAACTGTGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: KCEFFFKVLTYAGFN*NAFGLLGQFNCDLR
Trigger: CCTGAGGTCACAGTTAAACTGGCCGAGGAGCCCAAAGGCGTTTCAGTTAAATCCAGCATAAGTCAAGACCTTAAAGAAAAACTCACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp TTCAATATCTCGCAGCCTTCAGAAATGATGCTAAAGGCACTCTTCTaGTCTTCTGAAAGGCCAGCTGGCTTGCTGGTTACTGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: FNISQPSEMMLKALF*SSERPAGLLVTENS
Trigger: AGAATTTTCAGTAACCAGCAAGCCAGCTGGCCTTTCAGAAGATCAGAAGAGTGCCTTTAGCATCATTTCTGAAGGCTGCGAGATATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp ACTTATCTTGCATTTGTTCACTTTCTTCCTGATCCACTGAAGGGATaGAGGCAGGGGCATGGATATTCAATATCTCGCAGCCTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: TYLAFVHFLPDPLKG*RQGHGYSISRSLQK
Trigger: TTTCTGAAGGCTGCGAGATATTGAATATCCATGCCCCTGCCTTCATCCCTTCAGTGGATCAGGAAGAAAGTGAACAAATGCAAGATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTTCCAGGCCTTGGCCTaGATCTTCTTGAGTTACAGT +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNFQALA*IFLSYS
Trigger: ACTGTAACTCAAGAAGATCAAGGCCAAGGCCTGGAA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp ACATCAGATACAGAAACTGCCTCTACTTCCAGCTTCTCTGGTGTATaGTTCAAATCCTGTAGGACTGAATACTCAGATACAAAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: TSDTETASTSSFSGV*FKSCRTEYSDTKAE
Trigger: TTCTGCTTTTGTATCTGAGTATTCAGTCCTACAGGATTTGAACCATACACCAGAGAAGCTGGAAGTAGAGGCAGTTTCTGTATCTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp GTATACCTCTGTGACTATATGTTCTGGTTTTTCAACAACTGGTGTTaGTTTAGCCAGCAAATGTGGTTGAGCCTTATCCAAAGAAACAGC +
Preference number: 5 (lower is better)
Translates to: VYLCDYMFWFFNNWC*FSQQMWLSLIQRNS
Trigger: GCTGTTTCTTTGGATAAGGCTCAACCACATTTGCTGGCTAAACCAACACCAGTTGTTGAAAAACCAGAACATATAGTCACAGAGGTATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 90 bp TTCTGGGTATACCTCTGTGACTATATGTTCTGGTTTTTCAACAACTaGTGTTGGTTTAGCCAGCAAATGTGGTTGAGCCTTATCCAAAGA +
Preference number: 5 (lower is better)
Translates to: FWVYLCDYMFWFFNN*CWFSQQMWLSLIQR
Trigger: TCTTTGGATAAGGCTCAACCACATTTGCTGGCTAAACCAACACCAGTTGTTGAAAAACCAGAACATATAGTCACAGAGGTATACCCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACATATTAGAACCACCATaGCTCAAATCCGGCTCTAGA +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNILEPP*LKSGSR
Trigger: TCTAGAGCCGGATTTGAGCAATGGTGGTTCTAATAT...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCCACACGGGAAACCTaGGTTTTCTCTACTAAAGTT +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSTRET*VFSTKV
Trigger: AACTTTAGTAGAGAAAACCAAGGTTTCCCGTGTGGA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTGGCTATCTCCTCCTTaGTCTTATGAGTTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNWLSPP*SYEFPL
Trigger: CAAAGGAAACTCATAAGACAAAGGAGGAGATAGCCA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 90 bp TCACCCACACTTGGTAACATCGATCGGGTTCTAAGTCTTCAAATATaGAGCAACTTTCCTTCACTGTTAATCTATATTCTTCTACCAGTT +
Preference number: 5 (lower is better)
Translates to: SPTLGNIDRVLSLQI*SNFPSLLIYILLPV
Trigger: AACTGGTAGAAGAATATAGATTAACAGTGAAGGAAAGTTGCTGCATATTTGAAGACTTAGAACCCGATCGATGTTACCAAGTGTGGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 90 bp CTTGATCTTCTTGAGTTACAGTTTCGTCATGAAGAATGTCGTCTTTaGGTATGTACTTCTCAAAATACATACCTGGTCCATCATCAGTGT +
Preference number: 5 (lower is better)
Translates to: LDLLELQFRHEECRL*VCTSQNTYLVHHQC
Trigger: ACACTGATGATGGACCAGGTATGTATTTTGAGAAGTACATACTCAAAGACGACATTCTTCATGACGAAACTGTAACTCAAGAAGATCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS-3UTR CAA 90 bp TTTCTCGGGGTTTGGTTCAGGTCAAGTATAAATCCTTTGACTTTAGGAAACAACTCTTATGAGTTTCCTTaGTCTCATTTTCCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: FLGVWFRSSINPLTLGNNSYEFP*SHFPSV
Trigger: CACTGAAGGAAAATGAGACAAAGGAAACTCATAAGA...GTTGTTTCCTAAAGTCAAAGGATTTATACTTGACCTGAACCAAACCCCGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GGGGAAGACTCCTCCCGCTCCTGCGATGGCTCAGAATaGTCAGGCACAGGCGTGACCACTGAGGACCCCGCC +
Preference number: 6 (lower is better)
Translates to: GEDSSRSCDGSE*SGTGVTTEDPA
Trigger: GGCGGGGTCCTCAGTGGTCACGCCTGTGCCTGAGCATTCTGAGCCATCGCAGGAGCGGGAGGAGTCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp GGTCTCCCCTTGTCCCAGGGCACCAGCCCTCACAGCTaGGCTGGTGCAGATGCCGAGTCGATAGGCTGGACT +
Preference number: 6 (lower is better)
Translates to: GLPLSQGTSPHS*AGADAESIGWT
Trigger: AGTCCAGCCTATCGACTCGGCATCTGCACCAGCTCAGCTGTGAGGGCTGGTGCCCTGGGACAAGGGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GCTTGGTCTTGCCCTCCTCATCCTCATCTGATAACCTaGCGTCGGGCTCCTCCTCCGACTCGGCCGCCGTCT +
Preference number: 6 (lower is better)
Translates to: AWSCPPHPHLIT*RRAPPPTRPPS
Trigger: AGACGGCGGCCGAGTCGGAGGAGGAGCCCGACGCCAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp ATGGGCACAGGCCCAGGCGCATGCTCCTCCTCTCTGTaGACTATGGACTCAGGCTCAGGCGCATGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: MGTGPGACSSSL*TMDSGSGACSS
Trigger: GGAGGAGCATGCGCCTGAGCCTGAGTCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGGGCCTGTGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CCCCTTGTCCCAGGGCACCAGCCCTCACAGCTGAGCTaGTGCAGATGCCGAGTCGATAGGCTGGACTGTCTG +
Preference number: 6 (lower is better)
Translates to: PLVPGHQPSQLS*CRCRVDRLDCL
Trigger: CAGACAGTCCAGCCTATCGACTCGGCATCTGCACCAGCTCAGCTGTGAGGGCTGGTGCCCTGGGACAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GCTGGTGCAGATGCCGAGTCGATAGGCTGGACTGTCTaGGACGGTGGTTTCCCAGTAATGCTGGCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: AGADAESIGWTV*DGGFPVMLAAG
Trigger: GCCTGCGGCCAGCATTACTGGGAAACCACCGTCGCAGACAGTCCAGCCTATCGACTCGGCATCTGCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CTTGTCCCAGGGCACCAGCCCTCACAGCTGAGCTGGTaGAGATGCCGAGTCGATAGGCTGGACTGTCTGCGA +
Preference number: 6 (lower is better)
Translates to: LVPGHQPSQLSW*RCRVDRLDCLR
Trigger: TCGCAGACAGTCCAGCCTATCGACTCGGCATCTGCACCAGCTCAGCTGTGAGGGCTGGTGCCCTGGGACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGACTATGGGCTCCGGTGCATGCCCCTCATCTCTGTaGACTATGGGCTCAGGCGCATGCTCCTCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: WTMGSGACPSSL*TMGSGACSSPL
Trigger: CAGAGGGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCGGAGCCCATAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp CATCTCCCAGGCTTCTCCAAGGCAAAGGCGGGATGCACGCCCTCGTaGAACCTGTGCCTCACGATGAAGAGCAGCTGTCCACTCTCGGCG +
Preference number: 6 (lower is better)
Translates to: HLPGFSKAKAGCTPS*NLCLTMKSSCPLSA
Trigger: CGCCGAGAGTGGACAGCTGCTCTTCATCGTGAGGCACAGGTTCAACGAGGGCGTGCATCCCGCCTTTGCCTTGGAGAAGCCTGGGAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp AGGGGATCTCCGTCAGCCGTCTCCTCTCAGAGAAGCTaGTCACCGTCCCGTTCGCGGAGATCTGGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: RGSPSAVSSQRS*SPSRSRRSGEL
Trigger: CAGCTCTCCAGATCTCCGCGAACGGGACGGTGATCAGCTTCTCTGAGAGGAGACGGCTGACGGAGATCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TGCTCCTCCTCTCTGTGGACTATGGGCTCAGGCGCATaGTCCTCCTCTCTGTGGACTATGGGCTCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: CSSSLWTMGSGA*SSSLWTMGSGA
Trigger: TGCGCCTGAGCCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGAGGAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TGCTCCTCCTCTCTGTGGACTATGGGCTCCGGTGCATaGCCCTCATCTCTGTGGACTATGGGCTCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: CSSSLWTMGSGA*PSSLWTMGSGA
Trigger: TGCGCCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCGGAGCCCATAGTCCACAGAGAGGAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp AAGATCTCAGGCCCTCGCCCTCAGGAGAGTGCTGTCTaGAGTACTCCAGAGTGTAGGTCTCGGTGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: KISGPRPQESAV*STPECRSRWPP
Trigger: CGGAGGCCACCGAGACCTACACTCTGGAGTACTGCAGACAGCACTCTCCTGAGGGCGAGGGCCTGAGATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp AAGGCAAAGGCGGGATGCACGCCCTCGTTGAACCTGTaGCTCACGATGAAGAGCAGCTGTCCACTCTCGGCG +
Preference number: 6 (lower is better)
Translates to: KAKAGCTPSLNL*LTMKSSCPLSA
Trigger: CGCCGAGAGTGGACAGCTGCTCTTCATCGTGAGGCACAGGTTCAACGAGGGCGTGCATCCCGCCTTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGGCTCAGGCGCATGCTCCTCCTCTCTGTGGACTATaGGCTCAGGCGCATGCTCCTCCTCTCTGTGGACTA +
Preference number: 6 (lower is better)
Translates to: WAQAHAPPLCGL*AQAHAPPLCGL
Trigger: TAGTCCACAGAGAGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CAGGCCCAGGCGCATGCTCCTCCTCTCTGTGGACTATaGACTCAGGCTCAGGCGCATGCTCCTCCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: QAQAHAPPLCGL*TQAQAHAPPLF
Trigger: AAAGAGAGGAGGAGCATGCGCCTGAGCCTGAGTCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CAAGCTCAGGCACATGCTCCTCCTCTCTGTGGACTATaGGCACAGGCCCAGGCGCATGCTCCTCCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: QAQAHAPPLCGL*AQAQAHAPPLC
Trigger: ACAGAGAGGAGGAGCATGCGCCTGGGCCTGTGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp ATGGACTCAAGCTCAGGCACATGCTCCTCCTCTCTGTaGACTATGGGCACAGGCCCAGGCGCATGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: MDSSSGTCSSSL*TMGTGPGACSS
Trigger: GGAGGAGCATGCGCCTGGGCCTGTGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCTTGAGTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp AGATGCCGAGTCGATAGGCTGGACTGTCTGCGACGGTaGTTTCCCAGTAATGCTGGCCGCAGGCAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: RCRVDRLDCLRR*FPSNAGRRQAA
Trigger: AGCTGCCTGCCTGCGGCCAGCATTACTGGGAAACCACCGTCGCAGACAGTCCAGCCTATCGACTCGGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp AGGTCTCGGTGGCCTCCGGGTTGGCAGGCCGCCATCTaGCAGTGGCAGTGTTCCAACACACAGTACAGTCTT +
Preference number: 6 (lower is better)
Translates to: RSRWPPGWQAAI*QWQCSNTQYSL
Trigger: AAGACTGTACTGTGTGTTGGAACACTGCCACTGTCAGATGGCGGCCTGCCAACCCGGAGGCCACCGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TCCTCTCTGTGGACTATGGGCACAGGCCCAGGCGCATaGTCCTCCTCTCTGTGGACTATGGACTCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: SSLWTMGTGPGA*SSSLWTMDSGS
Trigger: TGAGCCTGAGTCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGGGCCTGTGCCCATAGTCCACAGAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CACATGCTCCTCCTCTCTGTGGACTATGGGCTCCGGTaGATGCCCCTCATCTCTGTGGACTATGGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: HMLLLSVDYGLR*MPLISVDYGLR
Trigger: CCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCGGAGCCCATAGTCCACAGAGAGGAGGAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TGCCCCTCATCTCTGTGGACTATGGGCTCAGGCACATaGTCCTCCTCTCTGTGGACTATGGGCTCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: CPSSLWTMGSGT*SSSLWTMGSGA
Trigger: TGCACCGGAGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCCCATAGTCCACAGAGATGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGGCTCAGGCGCATGCTCCTCCCCTCTGTGGACTATaGACTCAAGCTCAGGCACATGCTCCTCCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: WAQAHAPPLCGL*TQAQAHAPPLC
Trigger: ACAGAGAGGAGGAGCATGTGCCTGAGCTTGAGTCCATAGTCCACAGAGGGGAGGAGCATGCGCCTGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGACTATGGGCTCAGGCGCATGCTCCTCCCCTCTGTaGACTATGGACTCAAGCTCAGGCACATGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: WTMGSGACSSPL*TMDSSSGTCSS
Trigger: GGAGGAGCATGTGCCTGAGCTTGAGTCCATAGTCCACAGAGGGGAGGAGCATGCGCCTGAGCCCATAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGGCTCAGGCACATGCTCCTCCTCTCTGTGGACTATaGGCTCCGGTGCATGCCCCTCATCTCTGTGGACTA +
Preference number: 6 (lower is better)
Translates to: WAQAHAPPLCGL*APVHAPHLCGL
Trigger: TAGTCCACAGAGATGAGGGGCATGCACCGGAGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GAGCCCCGCTGCTGGTCTCTGCTCCCTTCTTCTGATTaGACCACTTGTTCGGATGAGATGGCCCAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: EPRCWSLLPSSD*TTCSDEMAQGG
Trigger: ACCTCCCTGGGCCATCTCATCCGAACAAGTGGTCCAATCAGAAGAAGGGAGCAGAGACCAGCAGCGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp GGCTTCTCCAAGGCAAAGGCGGGATGCACGCCCTCGTaGAACCTGTGCCTCACGATGAAGAGCAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: GFSKAKAGCTPS*NLCLTMKSSCP
Trigger: TGGACAGCTGCTCTTCATCGTGAGGCACAGGTTCAACGAGGGCGTGCATCCCGCCTTTGCCTTGGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TGTGTATCTCTGTGGCTCAGAGCAGTGCATGTACCATaGGGTCTCCCCTTGTCCCAGGGCACCAGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: CVSLWLRAVHVP*GLPLSQGTSPH
Trigger: GTGAGGGCTGGTGCCCTGGGACAAGGGGAGACCTCATGGTACATGCACTGCTCTGAGCCACAGAGATACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TGCTCCTCCTCTCTGTGGACTATGGGCTCAGGCGCATaGTCCTCCTCTCTGTGGACTATGGGCTCAGATGAG +
Preference number: 6 (lower is better)
Translates to: CSSSLWTMGSGA*SSSLWTMGSDE
Trigger: CTCATCTGAGCCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGAGGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TGCTCCTCCTCTCTGTGGACTATGGATTCAGGCGCATaGTCCTCCTCTCTGTGGACTATGGGCTCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: CSSSLWTMDSGA*SSSLWTMGSGA
Trigger: TGCGCCTGAGCCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAATCCATAGTCCACAGAGAGGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TCCCCTCTGTGGACTATGGACTCAAGCTCAGGCACATaGTCCTCCTCTCTGTGGACTATGGGCACAGGCCCA +
Preference number: 6 (lower is better)
Translates to: SPLWTMDSSSGT*SSSLWTMGTGP
Trigger: TGGGCCTGTGCCCATAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCTTGAGTCCATAGTCCACAGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TGCCCCTCATCTCTGTGGACTATGGGCTCAGGCGCATaGTCCTCCCCTCTGTGGACTATGGACTCAAGCTCA +
Preference number: 6 (lower is better)
Translates to: CPSSLWTMGSGA*SSPLWTMDSSS
Trigger: TGAGCTTGAGTCCATAGTCCACAGAGGGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGATGAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CCCCATCTCTTCCATCAATGCTGGAAGTGCAGGTGGTaGAGGTGGACTGTGTTCTGCTCCCCTCTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: PHLFHQCWKCRW*RWTVFCSPLSP
Trigger: GGGAGAGAGAGGGGAGCAGAACACAGTCCACCTGCACCACCTGCACTTCCAGCATTGATGGAAGAGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GTACATCTCCCAGGCTTCTCCAAGGCAAAGGCGGGATaGACGCCCTCGTTGAACCTGTGCCTCACGATGAAG +
Preference number: 6 (lower is better)
Translates to: VHLPGFSKAKAG*TPSLNLCLTMK
Trigger: CTTCATCGTGAGGCACAGGTTCAACGAGGGCGTGCATCCCGCCTTTGCCTTGGAGAAGCCTGGGAGATGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGATTCAGGCGCATGCTCCTCCTCTCTGTGGACTATaGGCTCAGGCGCATGCTCCTCCTCTCTGTGGACTA +
Preference number: 6 (lower is better)
Translates to: WIQAHAPPLCGL*AQAHAPPLCGL
Trigger: TAGTCCACAGAGAGGAGGAGCATGCGCCTGAGCCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAATCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGGCTCAGGTGCATGCCCCTCATCTCTGTGGACTATaGGCTCAGGCACATGCTCCTCCTCTCTGTGGACTA +
Preference number: 6 (lower is better)
Translates to: WAQVHAPHLCGL*AQAHAPPLCGL
Trigger: TAGTCCACAGAGAGGAGGAGCATGTGCCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCTGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp AGAACCATGGGTTCAGGCGCATGCTCCTCCTCTCTGTaGACTATGGACTCAGGCTCAGGCACATGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RTMGSGACSSSL*TMDSGSGTCSS
Trigger: GGAGGAGCATGTGCCTGAGCCTGAGTCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAACCCATGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GGTGAGGAGGCACCCTTTAGAAGCAGAGGAGATGTGTaGCCAAGCTCTGGTGTGGAAGAGAATGAGCCCCGC +
Preference number: 6 (lower is better)
Translates to: GEEAPFRSRGDV*PSSGVEENEPR
Trigger: GCGGGGCTCATTCTCTTCCACACCAGAGCTTGGCCACACATCTCCTCTGCTTCTAAAGGGTGCCTCCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CTGGTTGGTATAGTCCAGCAGAATGCCCACTCTGGCTaGACGCTCGGTTGCGTGCACCTCACTCACAATGCC +
Preference number: 6 (lower is better)
Translates to: LVGIVQQNAHSG*TLGCVHLTHNA
Trigger: GGCATTGTGAGTGAGGTGCACGCAACCGAGCGTCCAGCCAGAGTGGGCATTCTGCTGGACTATACCAACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp ATGGACTCAGGCTCAGGCGCATGCTCCTCCTCTCTTTaGACTATGGACTCAGGCGCATGCTCCTCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: MDSGSGACSSSL*TMDSGACSSSL
Trigger: CAGAGAGGAGGAGCATGCGCCTGAGTCCATAGTTCAAAGAGAGGAGGAGCATGCGCCTGAGCCTGAGTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CACATGCTCCTCCTCTCTGTGAACTATGGGCTCAGGTaGATGCCCCTCATCTCTGTGGACTATGGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: HMLLLSVNYGLR*MPLISVDYGLR
Trigger: CCTGAGCCCATAGTCCACAGAGATGAGGGGCATGCACCTGAGCCCATAGTTCACAGAGAGGAGGAGCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GGGGAAAGGGGCCCAATATTGTCCTCTTCCTGCCCTTaGTCTGATAGACCTGTGGGTGAGGAGGCACCCTTT +
Preference number: 6 (lower is better)
Translates to: GERGPILSSSCP*SDRPVGEEAPF
Trigger: AAAGGGTGCCTCCTCACCCACAGGTCTATCAGAGCAAGGGCAGGAAGAGGACAATATTGGGCCCCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TTGTGCCTGACAGAGTCTGGGGGCTCTAAGCCCAGGTaGAGAGTACATCTCCCAGGCTTCTCCAAGGCAAAG +
Preference number: 6 (lower is better)
Translates to: LCLTESGGSKPR*RVHLPGFSKAK
Trigger: CTTTGCCTTGGAGAAGCCTGGGAGATGTACTCTGCACCTGGGCTTAGAGCCCCCAGACTCTGTCAGGCACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGACTCAGGCGCATGCTCCTCCTCTCTGTGGACTATaGATTCAGGCGCATGCTCCTCCTCTCTGTGGACTA +
Preference number: 6 (lower is better)
Translates to: WTQAHAPPLCGL*IQAHAPPLCGL
Trigger: TAGTCCACAGAGAGGAGGAGCATGCGCCTGAATCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAGTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CAGGCTCAGGCGCATGCTCCTCCTCTCTTTGAACTATaGACTCAGGCGCATGCTCCTCCTCTCTGTGGACTA +
Preference number: 6 (lower is better)
Translates to: QAQAHAPPLFEL*TQAHAPPLCGL
Trigger: TAGTCCACAGAGAGGAGGAGCATGCGCCTGAGTCCATAGTTCAAAGAGAGGAGGAGCATGCGCCTGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CATCCCAGACCCTGGAACATTTGGGAGCCGAGGCTCTaGTGTCTGATCCTGCGATTTGTGTGCTGTCGCTTC +
Preference number: 6 (lower is better)
Translates to: HPRPWNIWEPRL*CLILRFVCCRF
Trigger: GAAGCGACAGCACACAAATCGCAGGATCAGACACCAGAGCCTCGGCTCCCAAATGTTCCAGGGTCTGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TTCTGCTGCATTGCCGCCTCATCAAGGGTCTCCATGTaGCCTGTGGGTTCTCCTTCCCGGCCAACAACTTTG +
Preference number: 6 (lower is better)
Translates to: FCCIAASSRVSM*PVGSPSRPTTL
Trigger: CAAAGTTGTTGGCCGGGAAGGAGAACCCACAGGCCACATGGAGACCCTTGATGAGGCGGCAATGCAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GTCTCTGGTTGGTATAGTCCAGCAGAATGCCCACTCTaGCTGGACGCTCGGTTGCGTGCACCTCACTCACAA +
Preference number: 6 (lower is better)
Translates to: VSGWYSPAECPL*LDARLRAPHSQ
Trigger: TTGTGAGTGAGGTGCACGCAACCGAGCGTCCAGCCAGAGTGGGCATTCTGCTGGACTATACCAACCAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp ACCATGGAAAAGGAAGGGTCAGAGACGATACACTCCTGCTTGGTCTaGCCCTCCTCATCCTCATCTGATAACCTGGCGTCGGGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TMEKEGSETIHSCLV*PSSSSSDNLASGSS
Trigger: GGAGGAGCCCGACGCCAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTGTATCGTCTCTGACCCTTCCTTTTCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp ACTGCCACCATGGAAAAGGAAGGGTCAGAGACGATACACTCCTGCTaGGTCTTGCCCTCCTCATCCTCATCTGATAACCTGGCGTCGGGC +
Preference number: 6 (lower is better)
Translates to: TATMEKEGSETIHSC*VLPSSSSSDNLASG
Trigger: GCCCGACGCCAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTGTATCGTCTCTGACCCTTCCTTTTCCATGGTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CTGGTGTGGAAGAGAATGAGCCCCGCTGCTGGTCTCTaGTCCCTTCTTCTGATTGGACCACTTGTTCGGATG +
Preference number: 6 (lower is better)
Translates to: LVWKRMSPAAGL*SLLLIGPLVRM
Trigger: CATCCGAACAAGTGGTCCAATCAGAAGAAGGGAGCAGAGACCAGCAGCGGGGCTCATTCTCTTCCACACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GAATCAGGGGAAAGGGGCCCAATATTGTCCTCTTCCTaGCCTTGCTCTGATAGACCTGTGGGTGAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: ESGERGPILSSS*PCSDRPVGEEA
Trigger: TGCCTCCTCACCCACAGGTCTATCAGAGCAAGGGCAGGAAGAGGACAATATTGGGCCCCTTTCCCCTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GTGGAGCAGCCCCAAGTTTCTCTGACATCAGATCAGTaGTCTCAGAGGACTCCAGCTGCCCAGTTCCTGGTT +
Preference number: 6 (lower is better)
Translates to: VEQPQVSLTSDQ*SQRTPAAQFLV
Trigger: AACCAGGAACTGGGCAGCTGGAGTCCTCTGAGAGCACTGATCTGATGTCAGAGAAACTTGGGGCTGCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GGCTCTAGCCCTTCCATGTCTGGCTCAAACTTTTCTTaGATGGCTGGCGCTGGTCTTGGTGGTCCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: GSSPSMSGSNFS*MAGAGLGGPVS
Trigger: AGAGACAGGACCACCAAGACCAGCGCCAGCCATCCAAGAAAAGTTTGAGCCAGACATGGAAGGGCTAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGGCTCAGGCGCATGCTCCTCCTCTCTGTGGACTATaGGCTCAGATGAGGTCACGTATTCAGACGCTTGTT +
Preference number: 6 (lower is better)
Translates to: WAQAHAPPLCGL*AQMRSRIQTLV
Trigger: AACAAGCGTCTGAATACGTGACCTCATCTGAGCCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CCAAGCTCTGGTGTGGAAGAGAATGAGCCCCGCTGCTaGTCTCTGCTCCCTTCTTCTGATTGGACCACTTGT +
Preference number: 6 (lower is better)
Translates to: PSSGVEENEPRC*SLLPSSDWTTC
Trigger: ACAAGTGGTCCAATCAGAAGAAGGGAGCAGAGACCAGCAGCGGGGCTCATTCTCTTCCACACCAGAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CCAACAAAGTCATACTCATCCTGCACAGGGGTATTGTaGAGCCTCTCTTCCCGGGACACAGATGGGACCAGC +
Preference number: 6 (lower is better)
Translates to: PTKSYSSCTGVL*SLSSRDTDGTS
Trigger: GCTGGTCCCATCTGTGTCCCGGGAAGAGAGGCTCCACAATACCCCTGTGCAGGATGAGTATGACTTTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TATGGACTCAGGCTCAGGCGCATGCTCCTCCTCTCTTaGAACTATGGACTCAGGCGCATGCTCCTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: YGLRLRRMLLLS*NYGLRRMLLLS
Trigger: AGAGAGGAGGAGCATGCGCCTGAGTCCATAGTTCAAAGAGAGGAGGAGCATGCGCCTGAGCCTGAGTCCATA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp TCTGTGGACTATGGACTCAGGCTCAGGCGCATGCTCCTCCTCTCTTaGAACTATGGACTCAGGCGCATGCTCCTCCTCTCTGTGGACTAT +
Preference number: 6 (lower is better)
Translates to: SVDYGLRLRRMLLLS*NYGLRRMLLLSVDY
Trigger: ATAGTCCACAGAGAGGAGGAGCATGCGCCTGAGTCCATAGTTCAAAGAGAGGAGGAGCATGCGCCTGAGCCTGAGTCCATAGTCCACAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp ATTGTGGAGCCTCTCTTCCCGGGACACAGATGGGACCAGCCTCTCTaGCAATACTTCAGGAGCATAGGTGGCACCTGCTGCAGATTCTTC +
Preference number: 6 (lower is better)
Translates to: IVEPLFPGHRWDQPL*QYFRSIGGTCCRFF
Trigger: GAAGAATCTGCAGCAGGTGCCACCTATGCTCCTGAAGTATTGCAAGAGAGGCTGGTCCCATCTGTGTCCCGGGAAGAGAGGCTCCACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp CTTCTCTGCCAGGCCCCTCTTCCCTGCCAAGGAAAATaGTCTAGTTTCCCAGCCATCCTTCTCCTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: LLCQAPLPCQGK*SSFPAILLLCW
Trigger: CCAACAGAGGAGAAGGATGGCTGGGAAACTAGATCATTTTCCTTGGCAGGGAAGAGGGGCCTGGCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TCAGCCTCTTCCGTGTCCTCATCAGACAGAACAGTCTaGTCAGAGGGGGACGTTAAGCACAGTGGAGAATCC +
Preference number: 6 (lower is better)
Translates to: SASSVSSSDRTV*SEGDVKHSGES
Trigger: GGATTCTCCACTGTGCTTAACGTCCCCCTCTGAGCAGACTGTTCTGTCTGATGAGGACACGGAAGAGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp ACTGCTCTGACTTGCTCTGTAATGGGAGCTTTCTGCTaGATTGCCGCCTCATCAAGGGTCTCCATGTGGCCT +
Preference number: 6 (lower is better)
Translates to: TALTCSVMGAFC*IAASSRVSMWP
Trigger: AGGCCACATGGAGACCCTTGATGAGGCGGCAATGCAGCAGAAAGCTCCCATTACAGAGCAAGTCAGAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GTGACTGCTCTGACTTGCTCTGTAATGGGAGCTTTCTaGTGCATTGCCGCCTCATCAAGGGTCTCCATGTGG +
Preference number: 6 (lower is better)
Translates to: VTALTCSVMGAF*CIAASSRVSMW
Trigger: CCACATGGAGACCCTTGATGAGGCGGCAATGCAGCAGAAAGCTCCCATTACAGAGCAAGTCAGAGCAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp AGGGGTATTGTGGAGCCTCTCTTCCCGGGACACAGATaGGACCAGCCTCTCTTGCAATACTTCAGGAGCATA +
Preference number: 6 (lower is better)
Translates to: RGIVEPLFPGHR*DQPLLQYFRSI
Trigger: TATGCTCCTGAAGTATTGCAAGAGAGGCTGGTCCCATCTGTGTCCCGGGAAGAGAGGCTCCACAATACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp ACTGCAATTGTTGTGCTGGTAGCAGAGCTTGGTTCCTaGGGTTCTAGTCTGGGAGGCTGTGGAACAGCCACT +
Preference number: 6 (lower is better)
Translates to: TAIVVLVAELGS*GSSLGGCGTAT
Trigger: AGTGGCTGTTCCACAGCCTCCCAGACTAGAACCCCAGGAACCAAGCTCTGCTACCAGCACAACAATTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp AAGGAAGGGTCAGAGACGATACACTCCTGCTTGGTCTaGCCCTCCTCATCCTCATCTGATAACCTGGCGTCG +
Preference number: 6 (lower is better)
Translates to: KEGSETIHSCLV*PSSSSSDNLAS
Trigger: CGACGCCAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTGTATCGTCTCTGACCCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp AAGGAAAGTGCTGGGGGCTCCTCTAGCAGCTCAGGGTaGACAGCCTTGGGGGTGGTGGGAAATATTTGTCTT +
Preference number: 6 (lower is better)
Translates to: KESAGGSSSSSG*TALGVVGNICL
Trigger: AAGACAAATATTTCCCACCACCCCCAAGGCTGTCAACCCTGAGCTGCTAGAGGAGCCCCCAGCACTTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp ACAGAATACTCAGCCGCAGATTCAGATTCTGGTGAGTaGCACACGCTCTCTGAGGCCTCATCTCCAGACAGG +
Preference number: 6 (lower is better)
Translates to: TEYSAADSDSGE*HTLSEASSPDR
Trigger: CCTGTCTGGAGATGAGGCCTCAGAGAGCGTGTGTCACTCACCAGAATCTGAATCTGCGGCTGAGTATTCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp GTGATCTGTATCCAGTGGAGCAGCCCCAAGTTTCTCTaGCATCAGATCAGTGCTCTCAGAGGACTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: VICIQWSSPKFL*HQISALRGLQL
Trigger: CAGCTGGAGTCCTCTGAGAGCACTGATCTGATGTCAGAGAAACTTGGGGCTGCTCCACTGGATACAGATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp AGTTGTGCCTTTCTAAGAACCATGGGTTCAGGCGCATaGTCCTCCTCTCTGTGGACTATGGACTCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: SCAFLRTMGSGA*SSSLWTMDSGS
Trigger: TGAGCCTGAGTCCATAGTCCACAGAGAGGAGGAGCATGCGCCTGAACCCATGGTTCTTAGAAAGGCACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GAGCCGAGGCTCTGGTGTCTGATCCTGCGATTTGTGTaGTGTCGCTTCTTGAGAATCCAGCACAGCTTTTTC +
Preference number: 6 (lower is better)
Translates to: EPRLWCLILRFV*CRFLRIQHSFF
Trigger: GAAAAAGCTGTGCTGGATTCTCAAGAAGCGACAGCACACAAATCGCAGGATCAGACACCAGAGCCTCGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TCATTTTCCCTGAGTTCCAAGGGAGCCATGATTTCTTaGTTCTCTGCCAGGCCCCTCTTCCCTGCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: SFSLSSKGAMIS*FSARPLFPAKE
Trigger: TTCCTTGGCAGGGAAGAGGGGCCTGGCAGAGAAGCAAGAAATCATGGCTCCCTTGGAACTCAGGGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TATTGTCCTCTTCCTGCCCTTGCTCTGATAGACCTGTaGGTGAGGAGGCACCCTTTAGAAGCAGAGGAGATG +
Preference number: 6 (lower is better)
Translates to: YCPLPALALIDL*VRRHPLEAEEM
Trigger: CATCTCCTCTGCTTCTAAAGGGTGCCTCCTCACCCACAGGTCTATCAGAGCAAGGGCAGGAAGAGGACAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CACAGGTTGACTCGGGTGAAACTGAGGGCTGAGAGGTaGGCAAAACGGATGTGGTTTCTTCCTTTACCACTG +
Preference number: 6 (lower is better)
Translates to: HRLTRVKLRAER*AKRMWFLPLPL
Trigger: CAGTGGTAAAGGAAGAAACCACATCCGTTTTGCCCACCTCTCAGCCCTCAGTTTCACCCGAGTCAACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CCTCGTGTTTGTCATTTGGCACCGTGGGTTTGGATGTaGGTGACACTTGCAATGGAGGTGGCTCGTTGTCTT +
Preference number: 6 (lower is better)
Translates to: PRVCHLAPWVWM*VTLAMEVARCL
Trigger: AAGACAACGAGCCACCTCCATTGCAAGTGTCACCCACATCCAAACCCACGGTGCCAAATGACAAACACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp AGGGCACCTCTCCAGGGTGGAGCAAGCTCTCTTACTTaGTCTTCTTCTGGGCTCTGGGCTAATTTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: RAPLQGGASSLT*SSSGLWANFLW
Trigger: CCAAAGGAAATTAGCCCAGAGCCCAGAAGAAGACAAAGTAAGAGAGCTTGCTCCACCCTGGAGAGGTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp CTGGCTCAAACTTTTCTTGGATGGCTGGCGCTGGTCTaGGTGGTCCTGTCTCTAAAGACTCCTTCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: LAQTFLGWLALV*VVLSLKTPSLP
Trigger: AGGCAGAGAAGGAGTCTTTAGAGACAGGACCACCAAGACCAGCGCCAGCCATCCAAGAAAAGTTTGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp GTTATCTCCTCGTGTTTGTCATTTGGCACCGTGGGTTaGGATGTGGGTGACACTTGCAATGGAGGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: VISSCLSFGTVG*DVGDTCNGGGS
Trigger: CGAGCCACCTCCATTGCAAGTGTCACCCACATCCAAACCCACGGTGCCAAATGACAAACACGAGGAGATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp CCGAGGTCTGACTTTCTCCTGAAGCCCAAGGAGTGGAAGATCTGCTaGAGTTGGTCTCCCAGGTTATCCCACTGTCTTCACGTTGAACTG +
Preference number: 6 (lower is better)
Translates to: PRSDFLLKPKEWKIC*SWSPRLSHCLHVEL
Trigger: CAGTTCAACGTGAAGACAGTGGGATAACCTGGGAGACCAACTCAAGCAGATCTTCCACTCCTTGGGCTTCAGGAGAAAGTCAGACCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp CCTGTCTCTAAAGACTCCTTCTCTGCCTCCCATGGCATGGAATGGTaGACAGAAACCAAGCCTTCCTGTTGCACATCATCGGCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: PVSKDSFSASHGMEW*TETKPSCCTSSAEP
Trigger: AGGCTCAGCCGATGATGTGCAACAGGAAGGCTTGGTTTCTGTCAACCATTCCATGCCATGGGAGGCAGAGAAGGAGTCTTTAGAGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GAGAATTCTGACGCAAATGCAGAATCAGGGGAAAGGGGCCCAATATaGTCCTCTTCCTGCCCTTGCTCTGATAGACCTGTGGGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: ENSDANAESGERGPI*SSSCPCSDRPVGEE
Trigger: CTCCTCACCCACAGGTCTATCAGAGCAAGGGCAGGAAGAGGACAATATTGGGCCCCTTTCCCCTGATTCTGCATTTGCGTCAGAATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GCTGGTTCCTCTGAGTTCATCCTTGTGAAGGCGGACTGGGCTGATTaGGGCTTCTGTGGCATTCTATCTACTACGTCAGATGACGAGAGC +
Preference number: 6 (lower is better)
Translates to: AGSSEFILVKADWAD*GFCGILSTTSDDES
Trigger: GCTCTCGTCATCTGACGTAGTAGATAGAATGCCACAGAAGCCCAAATCAGCCCAGTCCGCCTTCACAAGGATGAACTCAGAGGAACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp AATGGAGGTGGCTCGTTGTCTTCTCTCTCTACCTCAACCCCTGAGTaGACAGGAAGTTTGGGTTCAGGCCTTAACACCTCTGAGGTAGAC +
Preference number: 6 (lower is better)
Translates to: NGGGSLSSLSTSTPE*TGSLGSGLNTSEVD
Trigger: GTCTACCTCAGAGGTGTTAAGGCCTGAACCCAAACTTCCTGTCAACTCAGGGGTTGAGGTAGAGAGAGAAGACAACGAGCCACCTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GGAGACCTTGTTATCTCCTCGTGTTTGTCATTTGGCACCGTGGGTTaGGATGTGGGTGACACTTGCAATGGAGGTGGCTCGTTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: GDLVISSCLSFGTVG*DVGDTCNGGGSLSS
Trigger: AGAAGACAACGAGCCACCTCCATTGCAAGTGTCACCCACATCCAAACCCACGGTGCCAAATGACAAACACGAGGAGATAACAAGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp CTGGAATGGAACTGCATAGCTCATCTTCTGGGTGACTGCTCTGACTaGCTCTGTAATGGGAGCTTTCTGCTGCATTGCCGCCTCATCAAG +
Preference number: 6 (lower is better)
Translates to: LEWNCIAHLLGDCSD*LCNGSFLLHCRLIK
Trigger: CTTGATGAGGCGGCAATGCAGCAGAAAGCTCCCATTACAGAGCAAGTCAGAGCAGTCACCCAGAAGATGAGCTATGCAGTTCCATTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp AAGACTCCTTCTCTGCCTCCCATGGCATGGAATGGTTaGCAGAAACCAAGCCTTCCTGTTGCACATCATCGG +
Preference number: 6 (lower is better)
Translates to: KTPSLPPMAWNG*QKPSLPVAHHR
Trigger: CCGATGATGTGCAACAGGAAGGCTTGGTTTCTGTCAACCATTCCATGCCATGGGAGGCAGAGAAGGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp ATAGCCGTGTCGAGTGCTGAAACCTCGTGGTCTTTGTaGATGTCCAGTGCCTTGTCCATTTCAGAGACCAGG +
Preference number: 6 (lower is better)
Translates to: IAVSSAETSWSL*MSSALSISETR
Trigger: CCTGGTCTCTGAAATGGACAAGGCACTGGACATTCACAAAGACCACGAGGTTTCAGCACTCGACACGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp ATCACCGTCCCGTTCGCGGAGATCTGGAGAGCTGGGTaGGCTGTTTCTCTCAATAAGAGGAATCTAGTTCCT +
Preference number: 6 (lower is better)
Translates to: ITVPFAEIWRAG*AVSLNKRNLVP
Trigger: AGGAACTAGATTCCTCTTATTGAGAGAAACAGCTCACCCAGCTCTCCAGATCTCCGCGAACGGGACGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GGTCTCCCAGGTTATCCCACTGTCTTCACGTTGAACTaGCACCATGGAAAAGGAAGGGTCAGAGACGATACA +
Preference number: 6 (lower is better)
Translates to: GLPGYPTVFTLN*HHGKGRVRDDT
Trigger: TGTATCGTCTCTGACCCTTCCTTTTCCATGGTGGCAGTTCAACGTGAAGACAGTGGGATAACCTGGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GTCCACAACATCCTCCTTGTTCACGCTCCAGTACACTaGAATTGTTGTGCTGGTAGCAGAGCTTGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: VHNILLVHAPVH*NCCAGSRAWFL
Trigger: CAGGAACCAAGCTCTGCTACCAGCACAACAATTGCAGTGTACTGGAGCGTGAACAAGGAGGATGTTGTGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGAAAAGGAAGGGTCAGAGACGATACACTCCTGCTTaGTCTTGCCCTCCTCATCCTCATCTGATAACCTGG +
Preference number: 6 (lower is better)
Translates to: WKRKGQRRYTPA*SCPPHPHLITW
Trigger: CCAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTGTATCGTCTCTGACCCTTCCTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CTCCTGAAGCCCAAGGAGTGGAAGATCTGCTTGAGTTaGTCTCCCAGGTTATCCCACTGTCTTCACGTTGAA +
Preference number: 6 (lower is better)
Translates to: LLKPKEWKICLS*SPRLSHCLHVE
Trigger: TTCAACGTGAAGACAGTGGGATAACCTGGGAGACCAACTCAAGCAGATCTTCCACTCCTTGGGCTTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CTTTGCATCTCTCTTCTCCCATCCACTGGTTGGTGGTaGTACCAAATCTTCAGCCTCAGGCTCCAAAGATGC +
Preference number: 6 (lower is better)
Translates to: LCISLLPSTGWW*YQIFSLRLQRC
Trigger: GCATCTTTGGAGCCTGAGGCTGAAGATTTGGTACCACCACCAACCAGTGGATGGGAGAAGAGAGATGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GCAGACTACTCTTTGCATCTCTCTTCTCCCATCCACTaGTTGGTGGTGGTACCAAATCTTCAGCCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: ADYSLHLSSPIH*LVVVPNLQPQA
Trigger: AGCCTGAGGCTGAAGATTTGGTACCACCACCAACCAGTGGATGGGAGAAGAGAGATGCAAAGAGTAGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TTATCTCCTCGTGTTTGTCATTTGGCACCGTGGGTTTaGATGTGGGTGACACTTGCAATGGAGGTGGCTCGT +
Preference number: 6 (lower is better)
Translates to: LSPRVCHLAPWV*MWVTLAMEVAR
Trigger: ACGAGCCACCTCCATTGCAAGTGTCACCCACATCCAAACCCACGGTGCCAAATGACAAACACGAGGAGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GCTGGTTCCTCTGAGTTCATCCTTGTGAAGGCGGACTaGGCTGATTTGGGCTTCTGTGGCATTCTATCTACT +
Preference number: 6 (lower is better)
Translates to: AGSSEFILVKAD*ADLGFCGILST
Trigger: AGTAGATAGAATGCCACAGAAGCCCAAATCAGCCCAGTCCGCCTTCACAAGGATGAACTCAGAGGAACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGGGTGAGGATTCTGAACCTGGCTCTTCTGGTAAGATaGCTTGACTGGCTGCTTCCTGATTCAGAGAGCCAA +
Preference number: 6 (lower is better)
Translates to: WVRILNLALLVR*LDWLLPDSESQ
Trigger: TTGGCTCTCTGAATCAGGAAGCAGCCAGTCAAGCCATCTTACCAGAAGAGCCAGGTTCAGAATCCTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GGGCAGCTTCACTCTGTTCACTCGTCCCAGAGGCATTaGTGGCTCTCACATAGAAGAAGTAATTGTCGTTGG +
Preference number: 6 (lower is better)
Translates to: GQLHSVHSSQRH*WLSHRRSNCRW
Trigger: CCAACGACAATTACTTCTTCTATGTGAGAGCCACCAATGCCTCTGGGACGAGTGAACAGAGTGAAGCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp GACTTTCTCCTGAAGCCCAAGGAGTGGAAGATCTGCTaGAGTTGGTCTCCCAGGTTATCCCACTGTCTTCAC +
Preference number: 6 (lower is better)
Translates to: DFLLKPKEWKIC*SWSPRLSHCLH
Trigger: GTGAAGACAGTGGGATAACCTGGGAGACCAACTCAAGCAGATCTTCCACTCCTTGGGCTTCAGGAGAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp CTGAGGCCTCATCTCCAGACAGGACTGGTGAAACTGTaGAAAAGAGTGGGGACTGGATGGCAGATGTCTTCT +
Preference number: 6 (lower is better)
Translates to: LRPHLQTGLVKL*KRVGTGWQMSS
Trigger: AGAAGACATCTGCCATCCAGTCCCCACTCTTTTCAACAGTTTCACCAGTCCTGTCTGGAGATGAGGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TGGGAGCTTGTGGTCACCTGTTTTCAACAGCAACTCTaGCGCATGTGCTGGAACAGAATACTCAGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: WELVVTCFQQQL*RMCWNRILSRR
Trigger: TCTGCGGCTGAGTATTCTGTTCCAGCACATGCGCAAGAGTTGCTGTTGAAAACAGGTGACCACAAGCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp GGCTCGTTGTCTTCTCTCTCTACCTCAACCCCTGAGTaGACAGGAAGTTTGGGTTCAGGCCTTAACACCTCT +
Preference number: 6 (lower is better)
Translates to: GSLSSLSTSTPE*TGSLGSGLNTS
Trigger: AGAGGTGTTAAGGCCTGAACCCAAACTTCCTGTCAACTCAGGGGTTGAGGTAGAGAGAGAAGACAACGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp AACTGCATAGCTCATCTTCTGGGTGACTGCTCTGACTaGCTCTGTAATGGGAGCTTTCTGCTGCATTGCCGC +
Preference number: 6 (lower is better)
Translates to: NCIAHLLGDCSD*LCNGSFLLHCR
Trigger: GCGGCAATGCAGCAGAAAGCTCCCATTACAGAGCAAGTCAGAGCAGTCACCCAGAAGATGAGCTATGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GCTCGACCTTGTTTTGCTCTGTTTCTGCGATTCGGTATGGTGGGATaGACACCTGTGATGCTGAATCCGGAGAAAAGAGGTCAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: ARPCFALFLRFGMVG*TPVMLNPEKRGQPL
Trigger: AAGAGGCTGACCTCTTTTCTCCGGATTCAGCATCACAGGTGTCAATCCCACCATACCGAATCGCAGAAACAGAGCAAAACAAGGTCGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp CCAAGTCAGACAAAACTGAATATTTCATCCCAGACCCTGGAACATTaGGGAGCCGAGGCTCTGGTGTCTGATCCTGCGATTTGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: PSQTKLNISSQTLEH*GAEALVSDPAICVL
Trigger: CAGCACACAAATCGCAGGATCAGACACCAGAGCCTCGGCTCCCAAATGTTCCAGGGTCTGGGATGAAATATTCAGTTTTGTCTGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp TCGTTGTCTTCTCTCTCTACCTCAACCCCTGAGTTGACAGGAAGTTaGGGTTCAGGCCTTAACACCTCTGAGGTAGACATGCTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: SLSSLSTSTPELTGS*GSGLNTSEVDMLGK
Trigger: TTTGCCCAGCATGTCTACCTCAGAGGTGTTAAGGCCTGAACCCAAACTTCCTGTCAACTCAGGGGTTGAGGTAGAGAGAGAAGACAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp TGCCAGAGGCTAGCTTTCTCCCTTCCTCAGAATCATCTACAGCCTTaGACTGAACCCTTCTGGGTTCCTGAGATAGCTTCTCACCAGACA +
Preference number: 6 (lower is better)
Translates to: CQRLAFSLPQNHLQP*TEPFWVPEIASHQT
Trigger: TGTCTGGTGAGAAGCTATCTCAGGAACCCAGAAGGGTTCAGTCAAAGGCTGTAGATGATTCTGAGGAAGGGAGAAAGCTAGCCTCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GCTTTCACAGCAGGGACAGATTTACTTTGGGTGAGTACTTCCACGTaGCCAGAGGCTAGCTTTCTCCCTTCCTCAGAATCATCTACAGCC +
Preference number: 6 (lower is better)
Translates to: AFTAGTDLLWVSTST*PEASFLPSSESSTA
Trigger: GGCTGTAGATGATTCTGAGGAAGGGAGAAAGCTAGCCTCTGGCAACGTGGAAGTACTCACCCAAAGTAAATCTGTCCCTGCTGTGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GGCTCCTCTACACAGTATACCTGGAATGAGTCCACAACATCCTCCTaGTTCACGCTCCAGTACACTGCAATTGTTGTGCTGGTAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GSSTQYTWNESTTSS*FTLQYTAIVVLVAE
Trigger: CTCTGCTACCAGCACAACAATTGCAGTGTACTGGAGCGTGAACAAGGAGGATGTTGTGGACTCATTCCAGGTATACTGTGTAGAGGAGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp AGAGCTGACCCTTCCAAACTACATATTCCCGAGGTCTaGCTTTCTCCTGAAGCCCAAGGAGTGGAAGATCTG +
Preference number: 6 (lower is better)
Translates to: RADPSKLHIPEV*LSPEAQGVEDL
Trigger: CAGATCTTCCACTCCTTGGGCTTCAGGAGAAAGTCAGACCTCGGGAATATGTAGTTTGGAAGGGTCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp GGCATACGTTTTCTTTTGCTCTTCGTGACTAAACAATaGGGTCCTGGACCCTTTGGAGAGGGCACCTCTCCA +
Preference number: 6 (lower is better)
Translates to: GIRFLLLFVTKQ*GPGPFGEGTSP
Trigger: TGGAGAGGTGCCCTCTCCAAAGGGTCCAGGACCTCATTGTTTAGTCACGAAGAGCAAAAGAAAACGTATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp ACAACTCGGGCATCACGAACCGCCTCCTTTCCTCTTTaGGATCCACTCTACTCTCACCTGACTTTTCCAACT +
Preference number: 6 (lower is better)
Translates to: TTRASRTASFPL*DPLYSHLTFPT
Trigger: AGTTGGAAAAGTCAGGTGAGAGTAGAGTGGATCTCAAAGAGGAAAGGAGGCGGTTCGTGATGCCCGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TCTGACTTTCTCCTGAAGCCCAAGGAGTGGAAGATCTaGTTGAGTTGGTCTCCCAGGTTATCCCACTGTCTT +
Preference number: 6 (lower is better)
Translates to: SDFLLKPKEWKI*LSWSPRLSHCL
Trigger: AAGACAGTGGGATAACCTGGGAGACCAACTCAAGCAGATCTTCCACTCCTTGGGCTTCAGGAGAAAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TGGTGGTACCAAATCTTCAGCCTCAGGCTCCAAAGATaGCTGAGTTTTCTCCTGCTGTGCCAGGATGAGATA +
Preference number: 6 (lower is better)
Translates to: WWYQIFSLRLQR*LSFLLLCQDEI
Trigger: TATCTCATCCTGGCACAGCAGGAGAAAACTCAGGCATCTTTGGAGCCTGAGGCTGAAGATTTGGTACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CTCTTGCAATACTTCAGGAGCATAGGTGGCACCTGCTaGAGATTCTTCTTCTGGGAAAGACTCTTGTACGGG +
Preference number: 6 (lower is better)
Translates to: LLQYFRSIGGTC*RFFFWERLLYG
Trigger: CCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGCAGCAGGTGCCACCTATGCTCCTGAAGTATTGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp ACTACTCTTTGCATCTCTCTTCTCCCATCCACTGGTTaGTGGTGGTACCAAATCTTCAGCCTCAGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: TTLCISLLPSTG*WWYQIFSLRLQ
Trigger: TTGGAGCCTGAGGCTGAAGATTTGGTACCACCACCAACCAGTGGATGGGAGAAGAGAGATGCAAAGAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GTGAAACTGAGGGCTGAGAGGTGGGCAAAACGGATGTaGTTTCTTCCTTTACCACTGATGAGAGTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: VKLRAERWAKRM*FLPLPLMRVQK
Trigger: CTTCTGCACTCTCATCAGTGGTAAAGGAAGAAACCACATCCGTTTTGCCCACCTCTCAGCCCTCAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CTCCTTCTTCTCTGCCAATTGTTTAACACCCAGCTCTaGCTTATCTGCAGAAGAGCTGCTCTCATCAGGCAC +
Preference number: 6 (lower is better)
Translates to: LLLLCQLFNTQL*LICRRAALIRH
Trigger: GTGCCTGATGAGAGCAGCTCTTCTGCAGATAAGCCAGAGCTGGGTGTTAAACAATTGGCAGAGAAGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CCTCAGAATCATCTACAGCCTTTGACTGAACCCTTCTaGGTTCCTGAGATAGCTTCTCACCAGACACTGGTG +
Preference number: 6 (lower is better)
Translates to: PQNHLQPLTEPF*VPEIASHQTLV
Trigger: CACCAGTGTCTGGTGAGAAGCTATCTCAGGAACCCAGAAGGGTTCAGTCAAAGGCTGTAGATGATTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp AGGAGCATAGGTGGCACCTGCTGCAGATTCTTCTTCTaGGAAAGACTCTTGTACGGGGACATTCAGATTGAC +
Preference number: 6 (lower is better)
Translates to: RSIGGTCCRFFF*ERLLYGDIQID
Trigger: GTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGCAGCAGGTGCCACCTATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CAGCTTCACTCTGTTCACTCGTCCCAGAGGCATTGGTaGCTCTCACATAGAAGAAGTAATTGTCGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: QLHSVHSSQRHW*LSHRRSNCRWE
Trigger: CTCCCAACGACAATTACTTCTTCTATGTGAGAGCCACCAATGCCTCTGGGACGAGTGAACAGAGTGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp ATGGAAAAGGAAGGGTCAGAGACGATACACTCCTGCTaGGTCTTGCCCTCCTCATCCTCATCTGATAACCTG +
Preference number: 6 (lower is better)
Translates to: MEKEGSETIHSC*VLPSSSSSDNL
Trigger: CAGGTTATCAGATGAGGATGAGGAGGGCAAGACCAAGCAGGAGTGTATCGTCTCTGACCCTTCCTTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp AAAGACTCCTTCTCTGCCTCCCATGGCATGGAATGGTaGACAGAAACCAAGCCTTCCTGTTGCACATCATCG +
Preference number: 6 (lower is better)
Translates to: KDSFSASHGMEW*TETKPSCCTSS
Trigger: CGATGATGTGCAACAGGAAGGCTTGGTTTCTGTCAACCATTCCATGCCATGGGAGGCAGAGAAGGAGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TCTCTCTCTACCTCAACCCCTGAGTTGACAGGAAGTTaGGGTTCAGGCCTTAACACCTCTGAGGTAGACATG +
Preference number: 6 (lower is better)
Translates to: SLSTSTPELTGS*GSGLNTSEVDM
Trigger: CATGTCTACCTCAGAGGTGTTAAGGCCTGAACCCAAACTTCCTGTCAACTCAGGGGTTGAGGTAGAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp GCAGGGACAGATTTACTTTGGGTGAGTACTTCCACGTaGCCAGAGGCTAGCTTTCTCCCTTCCTCAGAATCA +
Preference number: 6 (lower is better)
Translates to: AGTDLLWVSTST*PEASFLPSSES
Trigger: TGATTCTGAGGAAGGGAGAAAGCTAGCCTCTGGCAACGTGGAAGTACTCACCCAAAGTAAATCTGTCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp GGCACCTGCTGCAGATTCTTCTTCTGGGAAAGACTCTaGTACGGGGACATTCAGATTGACATCTGGACTTGC +
Preference number: 6 (lower is better)
Translates to: GTCCRFFFWERL*YGDIQIDIWTC
Trigger: GCAAGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGCAGCAGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp CTTCTGGCGTCTTTGGCTCTCAGTAATATGAAGAGGAGCCATGTTTaGGGCTTCTTCCATACCCACTTTCTCACCCATAGGGGAACAAGG +
Preference number: 6 (lower is better)
Translates to: LLASLALSNMKRSHV*GFFHTHFLTHRGTR
Trigger: CCTTGTTCCCCTATGGGTGAGAAAGTGGGTATGGAAGAAGCCCAAAACATGGCTCCTCTTCATATTACTGAGAGCCAAAGACGCCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp AGCATAGGTGGCACCTGCTGCAGATTCTTCTTCTGGGAAAGACTCTaGTACGGGGACATTCAGATTGACATCTGGACTTGCATTTCCTGC +
Preference number: 6 (lower is better)
Translates to: SIGGTCCRFFFWERL*YGDIQIDIWTCISC
Trigger: GCAGGAAATGCAAGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGCAGCAGGTGCCACCTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp GGTACCAAATCTTCAGCCTCAGGCTCCAAAGATGCCTaGGTTTTCTCCTGCTGTGCCAGGATGAGATATTCA +
Preference number: 6 (lower is better)
Translates to: GTKSSASGSKDA*VFSCCARMRYS
Trigger: TGAATATCTCATCCTGGCACAGCAGGAGAAAACTCAGGCATCTTTGGAGCCTGAGGCTGAAGATTTGGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp CTTTTGCTTTCACAGCAGGGACAGATTTACTTTGGGTaGGTACTTCCACGTTGCCAGAGGCTAGCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: LLLSQQGQIYFG*VLPRCQRLAFS
Trigger: GGAGAAAGCTAGCCTCTGGCAACGTGGAAGTACTCACCCAAAGTAAATCTGTCCCTGCTGTGAAAGCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp CTTTCTTTCCCTTCTCTGCAGGAAGACCTTGCTCAGTaGCGAGTGACTTCTCAGATGGCTTTTGTGTCACCT +
Preference number: 6 (lower is better)
Translates to: LSFPSLQEDLAQ*RVTSQMAFVSP
Trigger: AGGTGACACAAAAGCCATCTGAGAAGTCACTCGTCACTGAGCAAGGTCTTCCTGCAGAGAAGGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TCCTCGGCCAGTTTAACTGTGACCTCAGGTAATGAATaGACCGCTGGCTTCTCGGCTATATTAACCTCAGCA +
Preference number: 6 (lower is better)
Translates to: SSASLTVTSGNE*TAGFSAILTSA
Trigger: TGCTGAGGTTAATATAGCCGAGAAGCCAGCGGTTCATTCATTACCTGAGGTCACAGTTAAACTGGCCGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TCTCCTGATCTCTCTTTCTGCAACTCTCAGTTGCTGTaGATCCTCTTCACCAACTGGCTTTTCTTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: SPDLSFCNSQLL*ILFTNWLFFQA
Trigger: GGCCTGGAAGAAAAGCCAGTTGGTGAAGAGGATTCACAGCAACTGAGAGTTGCAGAAAGAGAGATCAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TTCCAGTTCTTCCTTTGCTCTTTCAAGGACCATGGTTaGTGGAATGCTTGGTGGCTCCATTCTGTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: FQFFLCSFKDHG*WNAWWLHSVGL
Trigger: AAGACCCACAGAATGGAGCCACCAAGCATTCCAGCAACCATGGTCCTTGAAAGAGCAAAGGAAGAACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TCTAAAGACTCCTTCTCTGCCTCCCATGGCATGGAATaGTTGACAGAAACCAAGCCTTCCTGTTGCACATCA +
Preference number: 6 (lower is better)
Translates to: SKDSFSASHGME*LTETKPSCCTS
Trigger: TGATGTGCAACAGGAAGGCTTGGTTTCTGTCAACCATTCCATGCCATGGGAGGCAGAGAAGGAGTCTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GGCTCAGAAACACGTTGGGACTTTAATGGGAGCTTGTaGTCACCTGTTTTCAACAGCAACTCTTGCGCATGT +
Preference number: 6 (lower is better)
Translates to: GSETRWDFNGSL*SPVFNSNSCAC
Trigger: ACATGCGCAAGAGTTGCTGTTGAAAACAGGTGACCACAAGCTCCCATTAAAGTCCCAACGTGTTTCTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CTTGAGAATCCAGCACAGCTTTTTCCCTTCCGACTCTaGGCAAAGCCATCTGTTCATCTGCACTTGTTAGAG +
Preference number: 6 (lower is better)
Translates to: LENPAQLFPFRL*AKPSVHLHLLE
Trigger: CTCTAACAAGTGCAGATGAACAGATGGCTTTGCCCAGAGTCGGAAGGGAAAAAGCTGTGCTGGATTCTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GTGGCTTTTGCTTTCACAGCAGGGACAGATTTACTTTaGGTGAGTACTTCCACGTTGCCAGAGGCTAGCTTT +
Preference number: 6 (lower is better)
Translates to: VAFAFTAGTDLL*VSTSTLPEASF
Trigger: AAAGCTAGCCTCTGGCAACGTGGAAGTACTCACCCAAAGTAAATCTGTCCCTGCTGTGAAAGCAAAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp CCTTTGCTCTTTCAAGGACCATGGTTGCTGGAATGCTaGGTGGCTCCATTCTGTGGGTCTTTGATTCATCAG +
Preference number: 6 (lower is better)
Translates to: PLLFQGPWLLEC*VAPFCGSLIHQ
Trigger: CTGATGAATCAAAGACCCACAGAATGGAGCCACCAAGCATTCCAGCAACCATGGTCCTTGAAAGAGCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp ATGGGCTCAGAAACACGTTGGGACTTTAATGGGAGCTaGTGGTCACCTGTTTTCAACAGCAACTCTTGCGCA +
Preference number: 6 (lower is better)
Translates to: MGSETRWDFNGS*WSPVFNSNSCA
Trigger: TGCGCAAGAGTTGCTGTTGAAAACAGGTGACCACAAGCTCCCATTAAAGTCCCAACGTGTTTCTGAGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp CCTGTAACACTGGCACGCTCAGTTGTCACAAATGGCTaGGGTTGCTCCAAATTCTCCTTCTTCTCTGCCAAT +
Preference number: 6 (lower is better)
Translates to: PVTLARSVVTNG*GCSKFSFFSAN
Trigger: ATTGGCAGAGAAGAAGGAGAATTTGGAGCAACCCAAGCCATTTGTGACAACTGAGCGTGCCAGTGTTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp CATAGACGGAGAAGAGACCTCTGGCTTCTGGCGTCTTaGGCTCTCAGTAATATGAAGAGGAGCCATGTTTTG +
Preference number: 6 (lower is better)
Translates to: HRRRRDLWLLAS*ALSNMKRSHVL
Trigger: CAAAACATGGCTCCTCTTCATATTACTGAGAGCCAAAGACGCCAGAAGCCAGAGGTCTCTTCTCCGTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TCTGAGTTCATCCTTGTGAAGGCGGACTGGGCTGATTaGGGCTTCTGTGGCATTCTATCTACTACGTCAGAT +
Preference number: 6 (lower is better)
Translates to: SEFILVKADWAD*GFCGILSTTSD
Trigger: ATCTGACGTAGTAGATAGAATGCCACAGAAGCCCAAATCAGCCCAGTCCGCCTTCACAAGGATGAACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp ACATACCTGGTCCATCATCAGTGTCAGAATGTCGCCTaGGGAATGATGTCTCAGAGTCCACACTGTCACCTT +
Preference number: 6 (lower is better)
Translates to: TYLVHHQCQNVA*GMMSQSPHCHL
Trigger: AAGGTGACAGTGTGGACTCTGAGACATCATTCCCAAGGCGACATTCTGACACTGATGATGGACCAGGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp CACAAATGGCTTGGGTTGCTCCAAATTCTCCTTCTTCTCTGCCAATaGTTTAACACCCAGCTCTGGCTTATCTGCAGAAGAGCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: HKWLGLLQILLLLCQ*FNTQLWLICRRAAL
Trigger: GAGAGCAGCTCTTCTGCAGATAAGCCAGAGCTGGGTGTTAAACAATTGGCAGAGAAGAAGGAGAATTTGGAGCAACCCAAGCCATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GCAGATTCTTCTTCTGGGAAAGACTCTTGTACGGGGACATTCAGATaGACATCTGGACTTGCATTTCCTGCCTCATTACCCTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: ADSSSGKDSCTGTFR*TSGLAFPASLPWLL
Trigger: AAGCAGCCAGGGTAATGAGGCAGGAAATGCAAGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGAAGAATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp AGCTGGCTGTTGTGGCATCATTTGTGGAAGGCTGAGATTTTCTTCTaGATCAGCTGTATCATTTCTGGCACTGGAGGGAAATGCGTGTTC +
Preference number: 6 (lower is better)
Translates to: SWLLWHHLWKAEIFF*ISCIISGTGGKCVF
Trigger: GAACACGCATTTCCCTCCAGTGCCAGAAATGATACAGCTGATCAAGAAGAAAATCTCAGCCTTCCACAAATGATGCCACAACAGCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp AATATTCCACATAGACGGAGAAGAGACCTCTGGCTTCTGGCGTCTTaGGCTCTCAGTAATATGAAGAGGAGCCATGTTTTGGGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: NIPHRRRRDLWLLAS*ALSNMKRSHVLGFF
Trigger: GAAGAAGCCCAAAACATGGCTCCTCTTCATATTACTGAGAGCCAAAGACGCCAGAAGCCAGAGGTCTCTTCTCCGTCTATGTGGAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp TCTCAAAATACATACCTGGTCCATCATCAGTGTCAGAATGTCGCCTaGGGAATGATGTCTCAGAGTCCACACTGTCACCTTCTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SQNTYLVHHQCQNVA*GMMSQSPHCHLLKL
Trigger: CAGCTTCAGAAGGTGACAGTGTGGACTCTGAGACATCATTCCCAAGGCGACATTCTGACACTGATGATGGACCAGGTATGTATTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp AGCTGGGGAATAAGACTCACGTTCCTCGTCGTCCTCTaGAAAGACTGCAGGTTCATTGCTAGATTTCACATC +
Preference number: 6 (lower is better)
Translates to: SWGIRLTFLVVL*KDCRFIARFHI
Trigger: GATGTGAAATCTAGCAATGAACCTGCAGTCTTTTCAGAGGACGACGAGGAACGTGAGTCTTATTCCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TTTGGGCTTCTGTGGCATTCTATCTACTACGTCAGATaGCGAGAGCCATGTTTCCTTGTGATCACTGCTTGG +
Preference number: 6 (lower is better)
Translates to: FGLLWHSIYYVR*REPCFLVITAW
Trigger: CCAAGCAGTGATCACAAGGAAACATGGCTCTCGTCATCTGACGTAGTAGATAGAATGCCACAGAAGCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TCAACAACTGGTGTTGGTTTAGCCAGCAAATGTGGTTaGGCCTTATCCAAAGAAACAGCTGATGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: STTGVGLASKCG*ALSKETADAPG
Trigger: GCCTGGAGCATCAGCTGTTTCTTTGGATAAGGCTCAACCACATTTGCTGGCTAAACCAACACCAGTTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp CTTCTGGGAAAGACTCTTGTACGGGGACATTCAGATTaGCATCTGGACTTGCATTTCCTGCCTCATTACCCT +
Preference number: 6 (lower is better)
Translates to: LLGKTLVRGHSD*HLDLHFLPHYP
Trigger: AGGGTAATGAGGCAGGAAATGCAAGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TTGAACCTTAACAGCACTTATAGCCGTGTCGAGTGCTaGAACCTCGTGGTCTTTGTGAATGTCCAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: LNLNSTYSRVEC*NLVVFVNVQCL
Trigger: AAGGCACTGGACATTCACAAAGACCACGAGGTTTCAGCACTCGACACGGCTATAAGTGCTGTTAAGGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CTTCCTTTGCTCTTTCAAGGACCATGGTTGCTGGAATaGTTGGTGGCTCCATTCTGTGGGTCTTTGATTCAT +
Preference number: 6 (lower is better)
Translates to: LPLLFQGPWLLE*LVAPFCGSLIH
Trigger: ATGAATCAAAGACCCACAGAATGGAGCCACCAAGCATTCCAGCAACCATGGTCCTTGAAAGAGCAAAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CGTCAGATGACGAGAGCCATGTTTCCTTGTGATCACTaGTTGGCTCTTCCTTACGTGCAGAAATATTCCACA +
Preference number: 6 (lower is better)
Translates to: RQMTRAMFPCDH*LALPYVQKYST
Trigger: TGTGGAATATTTCTGCACGTAAGGAAGAGCCAAGCAGTGATCACAAGGAAACATGGCTCTCGTCATCTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TTTACCTTCTTCCTGGGGATGTGGTTGGGTTTCTGCTaGCTTTCTCTCCCTAATTTCTGGGTATACCTCTGT +
Preference number: 6 (lower is better)
Translates to: FTFFLGMWLGFC*LSLPNFWVYLC
Trigger: ACAGAGGTATACCCAGAAATTAGGGAGAGAAAGGCAGCAGAAACCCAACCACATCCCCAGGAAGAAGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp TGTCCAGTGCCTTGTCCATTTCAGAGACCAGGCTTTTaGAGGTGTAGCAGTAAGATTCAGCCTGAGTCTTTT +
Preference number: 6 (lower is better)
Translates to: CPVPCPFQRPGF*RCSSKIQPESF
Trigger: AAAAGACTCAGGCTGAATCTTACTGCTACACCTGCAAAAGCCTGGTCTCTGAAATGGACAAGGCACTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp ATGAATCACAGCTGTGGACGGTGCTGTTCTAAAAATTaGTCTTTCACTGGGCAGGCTACATCCGGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: MNHSCGRCCSKN*SFTGQATSGEV
Trigger: AACTTCACCGGATGTAGCCTGCCCAGTGAAAGAGCAATTTTTAGAACAGCACCGTCCACAGCTGTGATTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp AAGAGTCTTGCTGGGTTTTTCCATGAGCTTTTCAGTTaGAGAGATGCGCTGTTCAAGCCTCTCAGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: KSLAGFFHELFS*RDALFKPLSSF
Trigger: AAAGCTGCTGAGAGGCTTGAACAGCGCATCTCTCCAACTGAAAAGCTCATGGAAAAACCCAGCAAGACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TTTTGTGTCTTAGCGGTCACTGATTCTCTTGCTGATTaGTCTTCTGTCCTGTCCCACACTTCCTGTGAAGCA +
Preference number: 6 (lower is better)
Translates to: FCVLAVTDSLAD*SSVLSHTSCEA
Trigger: TGCTTCACAGGAAGTGTGGGACAGGACAGAAGACCAATCAGCAAGAGAATCAGTGACCGCTAAGACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TGTTTTGCTCTGTTTCTGCGATTCGGTATGGTGGGATaGACACCTGTGATGCTGAATCCGGAGAAAAGAGGT +
Preference number: 6 (lower is better)
Translates to: CFALFLRFGMVG*TPVMLNPEKRG
Trigger: ACCTCTTTTCTCCGGATTCAGCATCACAGGTGTCAATCCCACCATACCGAATCGCAGAAACAGAGCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TCTTCTGGGAAAGACTCTTGTACGGGGACATTCAGATaGACATCTGGACTTGCATTTCCTGCCTCATTACCC +
Preference number: 6 (lower is better)
Translates to: SSGKDSCTGTFR*TSGLAFPASLP
Trigger: GGGTAATGAGGCAGGAAATGCAAGTCCAGATGTCAATCTGAATGTCCCCGTACAAGAGTCTTTCCCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp ACACAGTATACCTGGAATGAGTCCACAACATCCTCCTaGTTCACGCTCCAGTACACTGCAATTGTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: TQYTWNESTTSS*FTLQYTAIVVL
Trigger: CAGCACAACAATTGCAGTGTACTGGAGCGTGAACAAGGAGGATGTTGTGGACTCATTCCAGGTATACTGTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp TTCTGGGTTCCTGAGATAGCTTCTCACCAGACACTGGTGCTTTGCTaGTTTCTTGGTTTCTGGTTTCAGATGTGTGATCTGTATCCAGTG +
Preference number: 6 (lower is better)
Translates to: FWVPEIASHQTLVLC*FLGFWFQMCDLYPV
Trigger: CACTGGATACAGATCACACATCTGAAACCAGAAACCAAGAAACAAGCAAAGCACCAGTGTCTGGTGAGAAGCTATCTCAGGAACCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TCCATACCCACTTTCTCACCCATAGGGGAACAAGGATaGATTCCAGGATGTTTGTCACCAACTGAAGTAGCT +
Preference number: 6 (lower is better)
Translates to: SIPTFSPIGEQG*IPGCLSPTEVA
Trigger: AGCTACTTCAGTTGGTGACAAACATCCTGGAATTCATCCTTGTTCCCCTATGGGTGAGAAAGTGGGTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TCTACTACGTCAGATGACGAGAGCCATGTTTCCTTGTaGTCACTGCTTGGCTCTTCCTTACGTGCAGAAATA +
Preference number: 6 (lower is better)
Translates to: STTSDDESHVSL*SLLGSSLRAEI
Trigger: TATTTCTGCACGTAAGGAAGAGCCAAGCAGTGATCACAAGGAAACATGGCTCTCGTCATCTGACGTAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp GTTCAAGCCTCTCAGCAGCTTTTGATTCTTCCAATTTaGAAGGTCGAGATTCCGGCATCCTTTGCAACTCTC +
Preference number: 6 (lower is better)
Translates to: VQASQQLLILPI*KVEIPASFATL
Trigger: GAGAGTTGCAAAGGATGCCGGAATCTCGACCTTTCAAATTGGAAGAATCAAAAGCTGCTGAGAGGCTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp GCCTCCCATAGGAGGAACTCCATCAGCACTGATCTCTaGTGCACTAAGCATAAACTGAGTATAGTTACTTGC +
Preference number: 6 (lower is better)
Translates to: ASHRRNSISTDL*CTKHKLSIVTC
Trigger: GCAAGTAACTATACTCAGTTTATGCTTAGTGCATCAGAGATCAGTGCTGATGGAGTTCCTCCTATGGGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp ACACTGGCACGCTCAGTTGTCACAAATGGCTTGGGTTaGTCCAAATTCTCCTTCTTCTCTGCCAATTGTTTA +
Preference number: 6 (lower is better)
Translates to: TLARSVVTNGLG*SKFSFFSANCL
Trigger: TAAACAATTGGCAGAGAAGAAGGAGAATTTGGAGCAACCCAAGCCATTTGTGACAACTGAGCGTGCCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CTCCATCTTCTTCTTCTTCACTTCCTCGAAGCTCTGTaGTTTCTCATCATACTGCGCCAAAACCCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: LHLLLLHFLEAL*FLIILRQNPLH
Trigger: ATGAAGAGGGTTTTGGCGCAGTATGATGAGAAAGCACAGAGCTTCGAGGAAGTGAAGAAGAAGAAGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp CAGAGACCTCATTGGATGAAGATAGCCCAACTCCAATaGCTTCCTTTTCTTCTTCTAACAGGGTTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: QRPHWMKIAQLQ*LPFLLLTGLQD
Trigger: ATCCTGCAACCCTGTTAGAAGAAGAAAAGGAAGCCATTGGAGTTGGGCTATCTTCATCCAATGAGGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGCAGAAATATTCCACATAGACGGAGAAGAGACCTCTaGCTTCTGGCGTCTTTGGCTCTCAGTAATATGAAG +
Preference number: 6 (lower is better)
Translates to: CRNIPHRRRRDL*LLASLALSNMK
Trigger: CTTCATATTACTGAGAGCCAAAGACGCCAGAAGCCAGAGGTCTCTTCTCCGTCTATGTGGAATATTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TCTACTAAAGTTTTACCTTCTTCCTGGGGATGTGGTTaGGTTTCTGCTGCCTTTCTCTCCCTAATTTCTGGG +
Preference number: 6 (lower is better)
Translates to: STKVLPSSWGCG*VSAAFLSLISG
Trigger: CCCAGAAATTAGGGAGAGAAAGGCAGCAGAAACCCAACCACATCCCCAGGAAGAAGGTAAAACTTTAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TCTAGTTCAGAAGTCACAGTTGGAGCTAAATTGAGTTaGACATCCGCCTTTGGCTCATCTCCCAAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: SSSEVTVGAKLS*TSAFGSSPKSD
Trigger: GTCTGACTTGGGAGATGAGCCAAAGGCGGATGTCAAACTCAATTTAGCTCCAACTGTGACTTCTGAACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp CTTGGGTTGCTCCAAATTCTCCTTCTTCTCTGCCAATaGTTTAACACCCAGCTCTGGCTTATCTGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: LGLLQILLLLCQ*FNTQLWLICRR
Trigger: TCTTCTGCAGATAAGCCAGAGCTGGGTGTTAAACAATTGGCAGAGAAGAAGGAGAATTTGGAGCAACCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp AACACTGGCACGCTCAGTTGTCACAAATGGCTTGGGTaGCTCCAAATTCTCCTTCTTCTCTGCCAATTGTTT +
Preference number: 6 (lower is better)
Translates to: NTGTLSCHKWLG*LQILLLLCQLF
Trigger: AAACAATTGGCAGAGAAGAAGGAGAATTTGGAGCAACCCAAGCCATTTGTGACAACTGAGCGTGCCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp TTTCCTCTGGAGGTGAGTGTGGTTTTGCCACTTCAGGCTCATTCTTaGACAACATTCTCTGTTCTAGTTCAGAAGTCACAGTTGGAGCTA +
Preference number: 6 (lower is better)
Translates to: FPLEVSVVLPLQAHS*TTFSVLVQKSQLEL
Trigger: TAGCTCCAACTGTGACTTCTGAACTAGAACAGAGAATGTTGTCAAAGAATGAGCCTGAAGTGGCAAAACCACACTCACCTCCAGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp GTAGCCCAATATCTTCTTTCTCATCTTCTGCCTGAATaGTGGGCTCAGAAACACGTTGGGACTTTAATGGGA +
Preference number: 6 (lower is better)
Translates to: VAQYLLSHLLPE*WAQKHVGTLMG
Trigger: TCCCATTAAAGTCCCAACGTGTTTCTGAGCCCATCATTCAGGCAGAAGATGAGAAAGAAGATATTGGGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TCCTGTTCCCTGATGTGCTCAAAGGATTCTGATCCTTaGGATAACACTTCTTTGGGTGAGGATTCTGAACCT +
Preference number: 6 (lower is better)
Translates to: SCSLMCSKDSDP*DNTSLGEDSEP
Trigger: AGGTTCAGAATCCTCACCCAAAGAAGTGTTATCTCAAGGATCAGAATCCTTTGAGCACATCAGGGAACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp GTTCCTGAGATAGCTTCTCACCAGACACTGGTGCTTTaGTTGTTTCTTGGTTTCTGGTTTCAGATGTGTGAT +
Preference number: 6 (lower is better)
Translates to: VPEIASHQTLVL*LFLGFWFQMCD
Trigger: ATCACACATCTGAAACCAGAAACCAAGAAACAAGCAAAGCACCAGTGTCTGGTGAGAAGCTATCTCAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GGAGCAAGCTCTCTTACTTTGTCTTCTTCTGGGCTCTaGGCTAATTTCCTTTGGGGAACTATATTAGAACCA +
Preference number: 6 (lower is better)
Translates to: GASSLTLSSSGL*ANFLWGTILEP
Trigger: TGGTTCTAATATAGTTCCCCAAAGGAAATTAGCCCAGAGCCCAGAAGAAGACAAAGTAAGAGAGCTTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GCTCAAAGGATTCTGATCCTTGAGATAACACTTCTTTaGGTGAGGATTCTGAACCTGGCTCTTCTGGTAAGA +
Preference number: 6 (lower is better)
Translates to: AQRILILEITLL*VRILNLALLVR
Trigger: TCTTACCAGAAGAGCCAGGTTCAGAATCCTCACCCAAAGAAGTGTTATCTCAAGGATCAGAATCCTTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TTTCCTTTCCTTGTGCATTCTGTTCCAGTTCTTCCTTaGCTCTTTCAAGGACCATGGTTGCTGGAATGCTTG +
Preference number: 6 (lower is better)
Translates to: FPFLVHSVPVLP*LFQGPWLLECL
Trigger: CAAGCATTCCAGCAACCATGGTCCTTGAAAGAGCAAAGGAAGAACTGGAACAGAATGCACAAGGAAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp GAGGTGAGTGTGGTTTTGCCACTTCAGGCTCATTCTTaGACAACATTCTCTGTTCTAGTTCAGAAGTCACAG +
Preference number: 6 (lower is better)
Translates to: EVSVVLPLQAHS*TTFSVLVQKSQ
Trigger: CTGTGACTTCTGAACTAGAACAGAGAATGTTGTCAAAGAATGAGCCTGAAGTGGCAAAACCACACTCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TTCTTCCAATTTGAAAGGTCGAGATTCCGGCATCCTTaGCAACTCTCCTACTGCTTCATTTTCCCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: FFQFERSRFRHP*QLSYCFIFPEF
Trigger: GAACTCAGGGAAAATGAAGCAGTAGGAGAGTTGCAAAGGATGCCGGAATCTCGACCTTTCAAATTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TGTTCAAGCCTCTCAGCAGCTTTTGATTCTTCCAATTaGAAAGGTCGAGATTCCGGCATCCTTTGCAACTCT +
Preference number: 6 (lower is better)
Translates to: CSSLSAAFDSSN*KGRDSGILCNS
Trigger: AGAGTTGCAAAGGATGCCGGAATCTCGACCTTTCAAATTGGAAGAATCAAAAGCTGCTGAGAGGCTTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GGGCTCTGGGCTAATTTCCTTTGGGGAACTATATTAGAACCACCATaGCTCAAATCCGGCTCTAGACTAATAGATGAATCTTTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: GLWANFLWGTILEPP*LKSGSRLIDESFPL
Trigger: GAGAGGAAAAGATTCATCTATTAGTCTAGAGCCGGATTTGAGCAATGGTGGTTCTAATATAGTTCCCCAAAGGAAATTAGCCCAGAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GACAACATTCTCTGTTCTAGTTCAGAAGTCACAGTTGGAGCTAAATaGAGTTTGACATCCGCCTTTGGCTCATCTCCCAAGTCAGACAAA +
Preference number: 6 (lower is better)
Translates to: DNILCSSSEVTVGAK*SLTSAFGSSPKSDK
Trigger: TTTGTCTGACTTGGGAGATGAGCCAAAGGCGGATGTCAAACTCAATTTAGCTCCAACTGTGACTTCTGAACTAGAACAGAGAATGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp ACTTTTGATCCTGTAACACTGGCACGCTCAGTTGTCACAAATGGCTaGGGTTGCTCCAAATTCTCCTTCTTCTCTGCCAATTGTTTAACA +
Preference number: 6 (lower is better)
Translates to: TFDPVTLARSVVTNG*GCSKFSFFSANCLT
Trigger: TGTTAAACAATTGGCAGAGAAGAAGGAGAATTTGGAGCAACCCAAGCCATTTGTGACAACTGAGCGTGCCAGTGTTACAGGATCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp AAGTTCCTAAAACAAGAGTTTGTGGTTCTACAGCTGACGGCTGAGTaGGCGGCGTTCCTAAATGCTTTGTTTCATCAGTCATGTCTGATA +
Preference number: 6 (lower is better)
Translates to: KFLKQEFVVLQLTAE*AAFLNALFHQSCLI
Trigger: TATCAGACATGACTGATGAAACAAAGCATTTAGGAACGCCGCCAACTCAGCCGTCAGCTGTAGAACCACAAACTCTTGTTTTAGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp TCTAGGGCCTGTTCAGCTGAACTTTCTGGGAAAGAAGTCAGTGTTTaGGTGGCTTCCTCTGAAGATTCCTCAACAGTTGATTTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: SRACSAELSGKEVSV*VASSEDSSTVDFCF
Trigger: AAAACAGAAATCAACTGTTGAGGAATCTTCAGAGGAAGCCACCAAAACACTGACTTCTTTCCCAGAAAGTTCAGCTGAACAGGCCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TGTGGCATCATTTGTGGAAGGCTGAGATTTTCTTCTTaGTCAGCTGTATCATTTCTGGCACTGGAGGGAAAT +
Preference number: 6 (lower is better)
Translates to: CGIICGRLRFSS*SAVSFLALEGN
Trigger: ATTTCCCTCCAGTGCCAGAAATGATACAGCTGATCAAGAAGAAAATCTCAGCCTTCCACAAATGATGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp GGAAGTAGCCCAATATCTTCTTTCTCATCTTCTGCCTaGATGATGGGCTCAGAAACACGTTGGGACTTTAAT +
Preference number: 6 (lower is better)
Translates to: GSSPISSFSSSA*MMGSETRWDFN
Trigger: ATTAAAGTCCCAACGTGTTTCTGAGCCCATCATTCAGGCAGAAGATGAGAAAGAAGATATTGGGCTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TTTAGATGTCTGGAAAGTGTGGACTGTGGGCCTGTCTaGCCATGTTTCTTGTTTCTTCACTGTATGTTCTAC +
Preference number: 6 (lower is better)
Translates to: FRCLESVDCGPV*PCFLFLHCMFY
Trigger: GTAGAACATACAGTGAAGAAACAAGAAACATGGTCAGACAGGCCCACAGTCCACACTTTCCAGACATCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TCTGTGCACATCTTCCACAGCTTCCAAGTGATGCTTTaGAATAAGAACAGACTGTTTCAGCATCTCTTCCGT +
Preference number: 6 (lower is better)
Translates to: SVHIFHSFQVML*NKNRLFQHLFR
Trigger: ACGGAAGAGATGCTGAAACAGTCTGTTCTTATTTCAAAGCATCACTTGGAAGCTGTGGAAGATGTGCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GTCGTCTTTGAGTATGTACTTCTCAAAATACATACCTaGTCCATCATCAGTGTCAGAATGTCGCCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: VVFEYVLLKIHT*SIISVRMSPWE
Trigger: TTCCCAAGGCGACATTCTGACACTGATGATGGACCAGGTATGTATTTTGAGAAGTACATACTCAAAGACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TGTTCAGCTGAACTTTCTGGGAAAGAAGTCAGTGTTTaGGTGGCTTCCTCTGAAGATTCCTCAACAGTTGAT +
Preference number: 6 (lower is better)
Translates to: CSAELSGKEVSV*VASSEDSSTVD
Trigger: ATCAACTGTTGAGGAATCTTCAGAGGAAGCCACCAAAACACTGACTTCTTTCCCAGAAAGTTCAGCTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp ATTCTCTGTTCTAGTTCAGAAGTCACAGTTGGAGCTAAATTGAGTTaGACATCCGCCTTTGGCTCATCTCCCAAGTCAGACAAAACTGAA +
Preference number: 6 (lower is better)
Translates to: ILCSSSEVTVGAKLS*TSAFGSSPKSDKTE
Trigger: TTCAGTTTTGTCTGACTTGGGAGATGAGCCAAAGGCGGATGTCAAACTCAATTTAGCTCCAACTGTGACTTCTGAACTAGAACAGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp TTGGAGCTAAATCATCTGAAACTACATTTTCAGAATCAGGAGACCTaGTTATCTCCTCGTGTTTGTCATTTGGCACCGTGGGTTTGGATG +
Preference number: 6 (lower is better)
Translates to: LELNHLKLHFQNQET*LSPRVCHLAPWVWM
Trigger: CATCCAAACCCACGGTGCCAAATGACAAACACGAGGAGATAACAAGGTCTCCTGATTCTGAAAATGTAGTTTCAGATGATTTAGCTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp CTTATCTTGCATTTGTTCACTTTCTTCCTGATCCACTaGAGGGATGAAGGCAGGGGCATGGATATTCAATAT +
Preference number: 6 (lower is better)
Translates to: LILHLFTFFLIH*RDEGRGMDIQY
Trigger: ATATTGAATATCCATGCCCCTGCCTTCATCCCTTCAGTGGATCAGGAAGAAAGTGAACAAATGCAAGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp AGGTTCATTGCTAGATTTCACATCAGATACAGAAACTaGCTCTACTTCCAGCTTCTCTGGTGTATGGTTCAA +
Preference number: 6 (lower is better)
Translates to: RFIARFHIRYRN*LYFQLLWCMVQ
Trigger: TTGAACCATACACCAGAGAAGCTGGAAGTAGAGGCAGTTTCTGTATCTGATGTGAAATCTAGCAATGAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp GATTTTCTTCTTGATCAGCTGTATCATTTCTGGCACTaGAGGGAAATGCGTGTTCTGTTGAAGATGGAACAT +
Preference number: 6 (lower is better)
Translates to: DFLLDQLYHFWH*REMRVLLKMEH
Trigger: ATGTTCCATCTTCAACAGAACACGCATTTCCCTCCAGTGCCAGAAATGATACAGCTGATCAAGAAGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TACCTCTGTGACTATATGTTCTGGTTTTTCAACAACTaGTGTTGGTTTAGCCAGCAAATGTGGTTGAGCCTT +
Preference number: 6 (lower is better)
Translates to: YLCDYMFWFFNN*CWFSQQMWLSL
Trigger: AAGGCTCAACCACATTTGCTGGCTAAACCAACACCAGTTGTTGAAAAACCAGAACATATAGTCACAGAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp ATCTCTACTGATACCCTTTGGAGCATTTCTGTCATCTaGTTTTTGGATAGCCAAAGACTTTTGCATCTCTGC +
Preference number: 6 (lower is better)
Translates to: ISTDTLWSISVI*FLDSQRLLHLC
Trigger: GCAGAGATGCAAAAGTCTTTGGCTATCCAAAAACCAGATGACAGAAATGCTCCAAAGGGTATCAGTAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TATCATTTCTGGCACTGGAGGGAAATGCGTGTTCTGTaGAAGATGGAACATTTAAATTGGAATCGGCATACG +
Preference number: 6 (lower is better)
Translates to: YHFWHWREMRVL*KMEHLNWNRHT
Trigger: CGTATGCCGATTCCAATTTAAATGTTCCATCTTCAACAGAACACGCATTTCCCTCCAGTGCCAGAAATGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp TTCAGTGATGTAATTTTCCTATCAGGAACTTCTAACTaGCTCTTCTGCGTTTTATGGGAAGCAGCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: FSDVIFLSGTSN*LFCVLWEAAAF
Trigger: GAAGGCAGCTGCTTCCCATAAAACGCAGAAGAGCAAGTTAGAAGTTCCTGATAGGAAAATTACATCACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 90 bp GATCAGCTGTATCATTTCTGGCACTGGAGGGAAATGCGTGTTCTGTaGAAGATGGAACATTTAAATTGGAATCGGCATACGTTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: DQLYHFWHWREMRVL*KMEHLNWNRHTFSF
Trigger: AAAAGAAAACGTATGCCGATTCCAATTTAAATGTTCCATCTTCAACAGAACACGCATTTCCCTCCAGTGCCAGAAATGATACAGCTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CCA 72 bp TGTGACTATATGTTCTGGTTTTTCAACAACTGGTGTTaGTTTAGCCAGCAAATGTGGTTGAGCCTTATCCAA +
Preference number: 6 (lower is better)
Translates to: CDYMFWFFNNWC*FSQQMWLSLIQ
Trigger: TTGGATAAGGCTCAACCACATTTGCTGGCTAAACCAACACCAGTTGTTGAAAAACCAGAACATATAGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp CAGGGCTTTCTGAAATTGAAGGACCATCTTCTTGGTTaGTCAGAACATCTTGTGATTCCAGAGAATTCCTTT +
Preference number: 6 (lower is better)
Translates to: QGFLKLKDHLLG*SEHLVIPENSF
Trigger: AAAGGAATTCTCTGGAATCACAAGATGTTCTGACAAACCAAGAAGATGGTCCTTCAATTTCAGAAAGCCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp CTATACCTAAGGATCTATCTCTATCTCTACTATCAATaGGTTCTGACCCAGCAGTTGGTACTTCTGATAACT +
Preference number: 6 (lower is better)
Translates to: LYLRIYLYLYYQ*VLTQQLVLLIT
Trigger: AGTTATCAGAAGTACCAACTGCTGGGTCAGAACTCATTGATAGTAGAGATAGAGATAGATCCTTAGGTATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS CAA 72 bp GCTAATTTCCTTTGGGGAACTATATTAGAACCACCATaGCTCAAATCCGGCTCTAGACTAATAGATGAATCT +
Preference number: 6 (lower is better)
Translates to: ANFLWGTILEPP*LKSGSRLIDES
Trigger: AGATTCATCTATTAGTCTAGAGCCGGATTTGAGCAATGGTGGTTCTAATATAGTTCCCCAAAGGAAATTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp CTTCTTCCTTCTTGTTTTATCATAAGTGCCAATAGATaGCTTTTCATTCTCAATATTGAGCACAGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: LLPSCFIISANR*LFILNIEHRAF
Trigger: GAAAGCCCTGTGCTCAATATTGAGAATGAAAAGTCATCTATTGGCACTTATGATAAAACAAGAAGGAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS TCA 72 bp TCGTTTGATAAAAATGTGAGTTTTTCTTTAAGGTCTTaGCTTATGCTGGATTTAACTGAAACGCCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: SFDKNVSFSLRS*LMLDLTETPLG
Trigger: GCCCAAAGGCGTTTCAGTTAAATCCAGCATAAGTCAAGACCTTAAAGAAAAACTCACATTTTTATCAAACGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4
CDS GCA 72 bp CTTGGTAACATCGATCGGGTTCTAAGTCTTCAAATATaGAGCAACTTTCCTTCACTGTTAATCTATATTCTT +
Preference number: 6 (lower is better)
Translates to: LGNIDRVLSLQI*SNFPSLLIYIL
Trigger: AAGAATATAGATTAACAGTGAAGGAAAGTTGCTGCATATTTGAAGACTTAGAACCCGATCGATGTTACCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062122.4