Pregenerated sensors for CMTR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046441Ensembl transcript IDs: ENSMUST00000056972.6, ENSMUST00000189685.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATGCAAGCAAGCGTGTAGCCACTCGAACACATACAGATGTCACATaGTTAGGGGCTAAATACCATCAGTACACGGCTCCTACCACAAAA | + |
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Preference number: 1 (lower is better) Translates to: YASKRVATRTHTDVT*LGAKYHQYTAPTTK Trigger: TTTTGTGGTAGGAGCCGTGTACTGATGGTATTTAGCCCCTAATCATGTGACATCTGTATGTGTTCGAGTGGCTACACGCTTGCTTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR-3UTR TCA 90 bp | ACAACCATCACACTCCGGTGTAACCCACAGGAGACTGCACACCAAGCCTTAAAAAGTGAAGCCAGAGAGTaGCTCACTTCCTGTCATGAA | + |
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Preference number: 2 (lower is better) Translates to: TTITLRCNPQETAHQALKSEARE*LTSCHE Trigger: TTCATGACAGGAAGTGAGTCACTCTCTGGCTTCACT...TTTTAAGGCTTGGTGTGCAGTCTCCTGTGGGTTACACCGGAGTGTGATGGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR-3UTR CCA 90 bp | ACAACCATCACACTCCGGTGTAACCCACAGGAGACTGCACACCAAGCCTTAAAACCAATCAAAAGGCAATaGCACATATCAAACAATCTG | + |
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Preference number: 2 (lower is better) Translates to: TTITLRCNPQETAHQALKPIKRQ*HISNNL Trigger: CAGATTGTTTGATATGTGCCATTGCCTTTTGATTGG...TTTTAAGGCTTGGTGTGCAGTCTCCTGTGGGTTACACCGGAGTGTGATGGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR-3UTR TCA 90 bp | GCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAGGAGTTGGGGAAAAAGTCTaGATGAAGGCACAGGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: AHQALKPSFLKNANIAEGVGEKV*MKAQGV Trigger: TACACCCTGTGCCTTCATTCAGACTTTTTCCCCAAC...TCCTTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTGAAGTCCACAGACATGCCAAGTGCTTCCAGGTAAATAGTGAAGCCAGAAAGAGAGGAATCAGTTaGGGAAAAAGTCTGAATGAA | + |
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Preference number: 2 (lower is better) Translates to: IPEVHRHAKCFQVNSEARKRGIS*GKSLNE Trigger: TTCATTCAGACTTTTTCCCCAACTGATTCCTCTCTT...TCTGGCTTCACTATTTACCTGGAAGCACTTGGCATGTCTGTGGACTTCAGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAATCAATTCAAAGAAAATaGAGCCACCAATCAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TAHQALKPSFLKNANIAESIQRK*SHQSKG Trigger: GCCTTTTGATTGGTGGCTTCATTTTCTTTGAATTGA...TTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR TCA 72 bp | AAGCGTGTAGCCACTCGAACACATACAGATGTCACATaGTTAGGGGCTAAATACCATCAGTACACGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: KRVATRTHTDVT*LGAKYHQYTAP Trigger: AGGAGCCGTGTACTGATGGTATTTAGCCCCTAATCATGTGACATCTGTATGTGTTCGAGTGGCTACACGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR TCA 72 bp | CAGTACACGGCTCCTACCACAAAAACTCTGTGCCTATaGGTCATATATCCTTCACATCAGAACAAGCCACAA | + |
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Preference number: 3 (lower is better) Translates to: QYTAPTTKTLCL*VIYPSHQNKPQ Trigger: TTGTGGCTTGTTCTGATGTGAAGGATATATGACTCATAGGCACAGAGTTTTTGTGGTAGGAGCCGTGTACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR TCA 72 bp | AATGGCACATATCAAACAATCTGGAATAAAGATCCCTaGAGTCCACAGACATGCCAAGTGCTTCCAGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: NGTYQTIWNKDP*SPQTCQVLPGK Trigger: TTTACCTGGAAGCACTTGGCATGTCTGTGGACTTCAGGGATCTTTATTCCAGATTGTTTGATATGTGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| 3UTR TCA 72 bp | CTTAAAAATGCCAACATTGCTGAAGGAAGTGTTTCGTaGCAAAGGAGTACTAGACACAGTTTTTCACTGTAC | + |
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Preference number: 3 (lower is better) Translates to: LKNANIAEGSVS*QRSTRHSFSLY Trigger: GTACAGTGAAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGGCATTTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | ACAACCATCACACTCCGGTGTAACCCACAGGAGACTGCACACCAAGCCTTAAAACGAGGGGCACTGGGGTaGAGCAGCTTGCTCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TTITLRCNPQETAHQALKRGALG*SSLLKR Trigger: CCTCTTGAGCAAGCTGCTGCACCCCAGTGCCCCTCG...TTTTAAGGCTTGGTGTGCAGTCTCCTGTGGGTTACACCGGAGTGTGATGGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | GCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAGGAAGACGGCACAGGTCCTaGGGGGCTCCAGGGACGTGG | + |
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Preference number: 4 (lower is better) Translates to: AHQALKPSFLKNANIAEGRRHRS*GAPGTW Trigger: CCACGTCCCTGGAGCCCCTCAGGACCTGTGCCGTCT...TCCTTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | ATCAGTTGGGGAAAAAGTCTGAATGAAGGCACAGGGTGTAAGTCTGCAGCAGATACGGACTCCACAAGCTaGATTTCCAGTGGCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: ISWGKSLNEGTGCKSAADTDSTS*ISSGAG Trigger: GCCCGCGCCACTGGAAATCCAGCTTGTGGAGTCCGT...ATCTGCTGCAGACTTACACCCTGTGCCTTCATTCAGACTTTTTCCCCAACTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | CCATCAGTACACGGCTCCTACCACAAAAACTCTGTGCCTATGAGTCATATATCCATCACATCTCCCCTGTaGAGCCGCCTCAGTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PSVHGSYHKNSVPMSHISITSPL*SRLSEC Trigger: GCACTCACTGAGGCGGCTTCACAGGGGAGATGTGAT...GGATATATGACTCATAGGCACAGAGTTTTTGTGGTAGGAGCCGTGTACTGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | GCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAGGACAGCAGGCACTTGACTaGGCCGCTGGGTTCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: AHQALKPSFLKNANIAEGQQALD*AAGFRT Trigger: GGTGCGGAACCCAGCGGCCCAGTCAAGTGCCTGCTG...TCCTTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | AATAGGGCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTTGCACCAGGCCTGAGTaGAGAGTTCCGCGTTCACGG | + |
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Preference number: 4 (lower is better) Translates to: NRAGKMKSETVSHKTAARCTRPE*RVPRSR Trigger: CCGTGAACGCGGAACTCTGCACTCAGGCCTGGTGCA...ACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGCCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | ATCCCTGAAGTCCACAGACATGCCAAGTGCTTCCAGGTAAATAGTGAAGCCAGAGTCATTGAGGACGTCTaGGCTGAAGGTCTCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: IPEVHRHAKCFQVNSEARVIEDV*AEGLQA Trigger: TGCTTGGAGACCTTCAGCCCAGACGTCCTCAATGAC...TCTGGCTTCACTATTTACCTGGAAGCACTTGGCATGTCTGTGGACTTCAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | ACAACCATCACACTCCGGTGTAACCCACAGGAGACTGCACACCAAGCCTTAAAAAATCCCTTAGATTATTaGGTCTCTCTTGCTCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: TTITLRCNPQETAHQALKNPLDY*VSLAPP Trigger: CGGGGGAGCAAGAGAGACTCAATAATCTAAGGGATT...TTTTAAGGCTTGGTGTGCAGTCTCCTGTGGGTTACACCGGAGTGTGATGGTTGT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | GCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTCATCAAGCTGGGTCACCATCGTaGAGCAGGGAACAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: AGKMKSETVSHKTAARHQAGSPS*SREQLK Trigger: CTTCAGCTGTTCCCTGCTTCACGATGGTGACCCAGC...TTGATGACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | GCCACCAATCAAAAGGCAATGGCACATATCAAACAATCTGGAATAAAGATCCCTGTGAAGCCGCCTCAGTaGGTGCAGCAGGCAGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: ATNQKAMAHIKQSGIKIPVKPPQ*VQQAVQ Trigger: TTGGACTGCCTGCTGCACTCACTGAGGCGGCTTCAC...AGGGATCTTTATTCCAGATTGTTTGATATGTGCCATTGCCTTTTGATTGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | CCAACATTGCTGAAGGAAGTGTTTCGTGACAAAGGAGTACTAGACACAGTTTTTTCAAGCAGCGTCCCCTaGAGGAGCGCCTCCATTGGT | + |
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Preference number: 4 (lower is better) Translates to: PTLLKEVFRDKGVLDTVFSSSVP*RSASIG Trigger: ACCAATGGAGGCGCTCCTTCAGGGGACGCTGCTTGA...AAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | ATCCCTGAAGTCCACAGACATGCCAAGTGCTTCCAGGTAAATAGTGAAGCCAGAACTGGTACTCAAGACTaGAAGCAGTCCCTTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: IPEVHRHAKCFQVNSEARTGTQD*KQSLQG Trigger: TCCTTGAAGGGACTGCTTCCAGTCTTGAGTACCAGT...TCTGGCTTCACTATTTACCTGGAAGCACTTGGCATGTCTGTGGACTTCAGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | CCATCAGTACACGGCTCCTACCACAAAAACTCTGTGCCTATGAGTCATATATCCACGGCCTTTTTGACATaGGAGATGATTTTGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PSVHGSYHKNSVPMSHISTAFLT*EMILPA Trigger: GGCAGGCAAAATCATCTCTCATGTCAAAAAGGCCGT...GGATATATGACTCATAGGCACAGAGTTTTTGTGGTAGGAGCCGTGTACTGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | ATCAGTTGGGGAAAAAGTCTGAATGAAGGCACAGGGTGTAAGTCTGCAGCAGATTTCAGTCTTCCACTCTaGAAAGCTTCCTGCGGAATG | + |
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Preference number: 4 (lower is better) Translates to: ISWGKSLNEGTGCKSAADFSLPL*KASCGM Trigger: CATTCCGCAGGAAGCTTTTCAGAGTGGAAGACTGAA...ATCTGCTGCAGACTTACACCCTGTGCCTTCATTCAGACTTTTTCCCCAACTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | GCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTCATCAACTAGATAGCAGAGGCTaGACGGCCTCTCTTCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: AGKMKSETVSHKTAARHQLDSRG*TASLPL Trigger: TAAGGGAAGAGAGGCCGTTCAGCCTCTGCTATCTAG...TTGATGACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | AATAGGGCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTATTGCTGCTTGGAACTaGCCTTGGCATCCACGCTCA | + |
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Preference number: 4 (lower is better) Translates to: NRAGKMKSETVSHKTAARIAAWN*PWHPRS Trigger: TGAGCGTGGATGCCAAGGTCAGTTCCAAGCAGCAAT...ACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGCCCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | ACTGCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAAAGGCCGTGTGCCTGTaGCACTCGTCCAGCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: TAHQALKPSFLKNANIAEKAVCL*HSSSFL Trigger: TAAGAAGCTGGACGAGTGGCACAGGCACACGGCCTT...TTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | AACTCTGTGCCTATGAGTCATATATCCTTCACATCAGAACAAGCCACAACTTTCGCAGTGCAAGGTATTTaGCATCAGCCGGTCATCCGT | + |
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Preference number: 4 (lower is better) Translates to: NSVPMSHISFTSEQATTFAVQGI*HQPVIR Trigger: ACGGATGACCGGCTGATGGCAAATACCTTGCACTGC...GAAAGTTGTGGCTTGTTCTGATGTGAAGGATATATGACTCATAGGCACAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | CCATCAGTACACGGCTCCTACCACAAAAACTCTGTGCCTATGAGTCATATATCCGCTCAAGGAAGGATTTaGGGATCACATGATGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PSVHGSYHKNSVPMSHISAQGRI*GSHDEE Trigger: TTCCTCATCATGTGATCCCCAAATCCTTCCTTGAGC...GGATATATGACTCATAGGCACAGAGTTTTTGTGGTAGGAGCCGTGTACTGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | AATAGGGCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTGACGGTGTGTTCCTCTaGCCAACTATTGAAGTATCC | + |
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Preference number: 4 (lower is better) Translates to: NRAGKMKSETVSHKTAARDGVFL*PTIEVS Trigger: GGATACTTCAATAGTTGGGCAGAGGAACACACCGTC...ACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGCCCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | AACTCTGTGCCTATGAGTCATATATCCTTCACATCAGAACAAGCCACAACTTTCCAACAGCGGTATTGCTaGTTGGAACTGACCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NSVPMSHISFTSEQATTFQQRYC*LELTLA Trigger: TGCCAAGGTCAGTTCCAAGCAGCAATACCGCTGTTG...GAAAGTTGTGGCTTGTTCTGATGTGAAGGATATATGACTCATAGGCACAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | ATCCCTGAAGTCCACAGACATGCCAAGTGCTTCCAGGTAAATAGTGAAGCCAGAATAATCAAATGCAGATaGCTTTTAGCAATGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: IPEVHRHAKCFQVNSEARIIKCR*LLAMAA Trigger: CGCTGCCATTGCTAAAAGGCATCTGCATTTGATTAT...TCTGGCTTCACTATTTACCTGGAAGCACTTGGCATGTCTGTGGACTTCAGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | AATAGGGCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTGGTAGGAAAAGCTCTTaGCAAAGAGCTCAGACACGT | + |
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Preference number: 4 (lower is better) Translates to: NRAGKMKSETVSHKTAARGRKSS*QRAQTR Trigger: ACGTGTCTGAGCTCTTTGCCAAGAGCTTTTCCTACC...ACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGCCCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | GCCACCAATCAAAAGGCAATGGCACATATCAAACAATCTGGAATAAAGATCCCTATCACCGGTATTATCTaGGCCGAAGTACCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ATNQKAMAHIKQSGIKIPITGII*AEVPAV Trigger: CACTGCTGGTACTTCGGCCCAGATAATACCGGTGAT...AGGGATCTTTATTCCAGATTGTTTGATATGTGCCATTGCCTTTTGATTGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | GCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAGGAAGAGATGATTTTGCCTaGCTTGTTGGTGAAGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: AHQALKPSFLKNANIAEGRDDFA*LVGEGR Trigger: ACGGCCTTCACCAACAAGGCAGGCAAAATCATCTCT...TCCTTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | ACTGCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAACCGAAGTACCAGCAGTaGAAGGTATTTGCCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: TAHQALKPSFLKNANIAEPKYQQ*KVFAIS Trigger: GCTGATGGCAAATACCTTGCACTGCTGGTACTTCGG...TTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | ACTGCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAGGCTTCCTGTTCACCTaGGTTTCCTTGGCAATCGAA | + |
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Preference number: 4 (lower is better) Translates to: TAHQALKPSFLKNANIAEGFLFT*VSLAIE Trigger: TTCGATTGCCAAGGAAACCCAGGTGAACAGGAAGCC...TTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | AACTCTGTGCCTATGAGTCATATATCCTTCACATCAGAACAAGCCACAACTTTCCCTCTGCCCAACTATTaGAGTATCCTTTGGCTACTT | + |
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Preference number: 4 (lower is better) Translates to: NSVPMSHISFTSEQATTFPLPNY*SILWLL Trigger: AAGTAGCCAAAGGATACTTCAATAGTTGGGCAGAGG...GAAAGTTGTGGCTTGTTCTGATGTGAAGGATATATGACTCATAGGCACAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR GCA 90 bp | ACTGCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAGGAGCTTCACACAGGTaGAGAGAATTCAGTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TAHQALKPSFLKNANIAEGASHR*REFSLP Trigger: TGGAAGACTGAATTCTCTGCACCTGTGTGAAGCTCC...TTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | AATAGGGCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTGATATTTCAGGGTCATaGTATCACCGGTATTATCTG | + |
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Preference number: 4 (lower is better) Translates to: NRAGKMKSETVSHKTAARDISGS*YHRYYL Trigger: CAGATAATACCGGTGATATCATGACCCTGAAATATC...ACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | CCAACATTGCTGAAGGAAGTGTTTCGTGACAAAGGAGTACTAGACACAGTTTTTGAGCCAGTGATTTCTTaGAAGAGGCTTCAGTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: PTLLKEVFRDKGVLDTVFEPVIS*KRLQLK Trigger: TTTCAACTGAAGCCTCTTTCAAGAAATCACTGGCTC...AAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CCA 90 bp | GCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTCATCAAACATTCTGTAGAAACTaGAAAACTGCATCTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AGKMKSETVSHKTAARHQTFCRN*KTASGR Trigger: CCTTCCAGATGCAGTTTTCCAGTTTCTACAGAATGT...TTGATGACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | AATAGGGCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTGCAGGTTTGAAAACATaGACTTGGTCAAAAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: NRAGKMKSETVSHKTAARAGLKT*TWSKEQ Trigger: TTGTTCTTTTGACCAAGTTCATGTTTTCAAACCTGC...ACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGCCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | CCAACATTGCTGAAGGAAGTGTTTCGTGACAAAGGAGTACTAGACACAGTTTTTTTTTTAACGAGCCAGTaGTTTCTTGAAAGAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PTLLKEVFRDKGVLDTVFFLTSQ*FLERGF Trigger: GAAGCCTCTTTCAAGAAATCACTGGCTCGTTAAAAA...AAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGG 40% GC, longest homopolymer 10 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | CCAACATTGCTGAAGGAAGTGTTTCGTGACAAAGGAGTACTAGACACAGTTTTTTCTAACTGGTATCTATaGAAGAACGTACAACACTCT | + |
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Preference number: 4 (lower is better) Translates to: PTLLKEVFRDKGVLDTVFSNWYL*KNVQHS Trigger: AGAGTGTTGTACGTTCTTTCATAGATACCAGTTAGA...AAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR TCA 90 bp | GCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAGGATCTCGATGGCTTCATTaGGAGTCTTTAAAATTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHQALKPSFLKNANIAEGSRWLH*ESLKFH Trigger: GTGAAATTTTAAAGACTCTCAATGAAGCCATCGAGA...TCCTTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS TCA 90 bp | GCATCTGGAGATCACAGACGGCCGGTGAGCCCACCAGCAGGCACTTaGCTGGGCCGCTGGGTTCCGCACCCTGTTCGTCCGGAAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ASGDHRRPVSPPAGT*LGRWVPHPVRPEGT Trigger: AGTGCCTTCCGGACGAACAGGGTGCGGAACCCAGCGGCCCAGTCAAGTGCCTGCTGGTGGGCTCACCGGCCGTCTGTGATCTCCAGATGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS TCA 90 bp | AAGGATGGGCAAGACCATCACATCTCCCCTGTGAAGCCGCCTCAGTaGGTGCAGCAGGCAGTCCAAGAACAAATGCTGGTAGGCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KDGQDHHISPVKPPQ*VQQAVQEQMLVGWV Trigger: GACCCAGCCTACCAGCATTTGTTCTTGGACTGCCTGCTGCACTCACTGAGGCGGCTTCACAGGGGAGATGTGATGGTCTTGCCCATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 90 bp | GGAAAAGCTCTTGGCAAAGAGCTCAGACACGTCATTGAGGACGTCTaGGCTGAAGGTCTCCAAGCAAGCTGGCTGCCGAGCCGGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKALGKELRHVIEDV*AEGLQASWLPSRKL Trigger: AAGCTTCCGGCTCGGCAGCCAGCTTGCTTGGAGACCTTCAGCCCAGACGTCCTCAATGACGTGTCTGAGCTCTTTGCCAAGAGCTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056972.6 ENSMUST00000189685.2 |
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| CDS TCA 90 bp | CTCGTGAAGCAAGAAAGGATGGGCAAGACCATCACATCTCCCCTGTaGAGCCGCCTCAGTGAGTGCAGCAGGCAGTCCAAGAACAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LVKQERMGKTITSPL*SRLSECSRQSKNKC Trigger: GCATTTGTTCTTGGACTGCCTGCTGCACTCACTGAGGCGGCTTCACAGGGGAGATGTGATGGTCTTGCCCATCCTTTCTTGCTTCACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 90 bp | ATCAGCCGGTCATCCGTAATCATCCTAAGATTGTCGTTTGCCTCGTaGTATGGATTCAGGCTGTTCGCCACCCAGCTCCATTCACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISRSSVIILRLSFAS*YGFRLFATQLHSQG Trigger: CCCCTGTGAATGGAGCTGGGTGGCGAACAGCCTGAATCCATACCACGAGGCAAACGACAATCTTAGGATGATTACGGATGACCGGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CCA 90 bp | GGAGCGCCTCCATTGGTAGGAACTGTAAAATCTGCCGAGGGGCACTaGGGTGCAGCAGCTTGCTCAAGAGGTCATGAACATTCTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GAPPLVGTVKSAEGH*GAAACSRGHEHSVE Trigger: TTCTACAGAATGTTCATGACCTCTTGAGCAAGCTGCTGCACCCCAGTGCCCCTCGGCAGATTTTACAGTTCCTACCAATGGAGGCGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS GCA 90 bp | ATTTGCCATCAGCCGGTCATCCGTAATCATCCTAAGATTGTCGTTTaGCTCGTGGTATGGATTCAGGCTGTTCGCCACCCAGCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: ICHQPVIRNHPKIVV*LVVWIQAVRHPAPF Trigger: GAATGGAGCTGGGTGGCGAACAGCCTGAATCCATACCACGAGGCAAACGACAATCTTAGGATGATTACGGATGACCGGCTGATGGCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CCA 90 bp | AAGCCCGGTCAGATATTTCAGGGTCATGATATCACCGGTATTATCTaGGCCGAAGTACCAGCAGTGCAAGGTATTTGCCATCAGCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KPGQIFQGHDITGII*AEVPAVQGICHQPV Trigger: GACCGGCTGATGGCAAATACCTTGCACTGCTGGTACTTCGGCCCAGATAATACCGGTGATATCATGACCCTGAAATATCTGACCGGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CCA 90 bp | TCCAGGGACGTGGGACAAGAGAACGTGATAAATCTAAAACAGCCGTaGAGGACGAAGGTCAGGCCAGCCATAAACCTCGTGAAGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRDVGQENVINLKQP*RTKVRPAINLVKQE Trigger: TTCTTGCTTCACGAGGTTTATGGCTGGCCTGACCTTCGTCCTCCACGGCTGTTTTAGATTTATCACGTTCTCTTGTCCCACGTCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CCA 90 bp | GCAGTTTCTTTCCTTCTAAGACTTGCCACGACTGGTACTCAAGACTaGAAGCAGTCCCTTCAAGGAGGGAATTCTGCCCGGGATGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVSFLLRLATTGTQD*KQSLQGGNSARDDR Trigger: TCTATCATCCCGGGCAGAATTCCCTCCTTGAAGGGACTGCTTCCAGTCTTGAGTACCAGTCGTGGCAAGTCTTAGAAGGAAAGAAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS-3UTR CAA 90 bp | ATCCCTGAAGTCCACAGACATGCCAAGTGCTTCCAGGTAAATAGTGAAGCCAGATGCTTGGAACTGACCTaGGCATCCACGCTCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPEVHRHAKCFQVNSEARCLELT*ASTLKA Trigger: AGCTTTGAGCGTGGATGCCAAGGTCAGTTCCAAGCA...TCTGGCTTCACTATTTACCTGGAAGCACTTGGCATGTCTGTGGACTTCAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS GCA 90 bp | ATCACCGGTATTATCTGGGCCGAAGTACCAGCAGTGCAAGGTATTTaGCATCAGCCGGTCATCCGTAATCATCCTAAGATTGTCGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ITGIIWAEVPAVQGI*HQPVIRNHPKIVVC Trigger: GCAAACGACAATCTTAGGATGATTACGGATGACCGGCTGATGGCAAATACCTTGCACTGCTGGTACTTCGGCCCAGATAATACCGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS GCA 90 bp | AGGGTCATGATATCACCGGTATTATCTGGGCCGAAGTACCAGCAGTaGAAGGTATTTGCCATCAGCCGGTCATCCGTAATCATCCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVMISPVLSGPKYQQ*KVFAISRSSVIILR Trigger: TCTTAGGATGATTACGGATGACCGGCTGATGGCAAATACCTTGCACTGCTGGTACTTCGGCCCAGATAATACCGGTGATATCATGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS GCA 90 bp | AAAGGGGAACACTTTACCTTCGGCAGTTTCTTTCCTTCTAAGACTTaGCACGACTGGTACTCAAGACTGGAAGCAGTCCCTTCAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGEHFTFGSFFPSKT*HDWYSRLEAVPSRR Trigger: CCTCCTTGAAGGGACTGCTTCCAGTCTTGAGTACCAGTCGTGGCAAGTCTTAGAAGGAAAGAAACTGCCGAAGGTAAAGTGTTCCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CCA 90 bp | CACTTTACCTTCGGCAGTTTCTTTCCTTCTAAGACTTGCCACGACTaGTACTCAAGACTGGAAGCAGTCCCTTCAAGGAGGGAATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HFTFGSFFPSKTCHD*YSRLEAVPSRREFC Trigger: GCAGAATTCCCTCCTTGAAGGGACTGCTTCCAGTCTTGAGTACCAGTCGTGGCAAGTCTTAGAAGGAAAGAAACTGCCGAAGGTAAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS-3UTR CAA 90 bp | ATCAGTTGGGGAAAAAGTCTGAATGAAGGCACAGGGTGTAAGTCTGCAGCAGATATGATTTTGCCTGCCTaGTTGGTGAAGGCCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISWGKSLNEGTGCKSAADMILPA*LVKAVC Trigger: GCACACGGCCTTCACCAACAAGGCAGGCAAAATCAT...ATCTGCTGCAGACTTACACCCTGTGCCTTCATTCAGACTTTTTCCCCAACTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS-3UTR CAA 90 bp | ATCAGTTGGGGAAAAAGTCTGAATGAAGGCACAGGGTGTAAGTCTGCAGCAGATTTCACCTGGGTTTCCTaGGCAATCGAAGCTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ISWGKSLNEGTGCKSAADFTWVS*AIEAAI Trigger: GATGGCAGCTTCGATTGCCAAGGAAACCCAGGTGAA...ATCTGCTGCAGACTTACACCCTGTGCCTTCATTCAGACTTTTTCCCCAACTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 90 bp | TATGAAAGAACGTACAACACTCTTCGTGTCGCTCAAGGAAGGATTTaGGGATCACATGATGAGGAAAGAGCGCCTTCCTGGTCATCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YERTYNTLRVAQGRI*GSHDEERAPSWSSQ Trigger: CTGAGATGACCAGGAAGGCGCTCTTTCCTCATCATGTGATCCCCAAATCCTTCCTTGAGCGACACGAAGAGTGTTGTACGTTCTTTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CAA 90 bp | ACAACCATCACACTCCGGTGTAACCCACAGGAGACTGCACACCAAGCCTTAAAATCCTCTGCCCAACTATaGAAGTATCCTTTGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: TTITLRCNPQETAHQALKSSAQL*KYPLAT Trigger: AGTAGCCAAAGGATACTTCAATAGTTGGGCAGAGGA...TTTTAAGGCTTGGTGTGCAGTCTCCTGTGGGTTACACCGGAGTGTGATGGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS-3UTR CAA 90 bp | GCCACCAATCAAAAGGCAATGGCACATATCAAACAATCTGGAATAAAGATCCCTATTTTGCCTGCCTTGTaGGTGAAGGCCGTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ATNQKAMAHIKQSGIKIPILPAL*VKAVCL Trigger: CAGGCACACGGCCTTCACCAACAAGGCAGGCAAAAT...AGGGATCTTTATTCCAGATTGTTTGATATGTGCCATTGCCTTTTGATTGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS-3UTR CAA 90 bp | AACTCTGTGCCTATGAGTCATATATCCTTCACATCAGAACAAGCCACAACTTTCAGCAGTGCAAGGTATTaGCCATCAGCCGGTCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: NSVPMSHISFTSEQATTFSSARY*PSAGHP Trigger: CGGATGACCGGCTGATGGCAAATACCTTGCACTGCT...GAAAGTTGTGGCTTGTTCTGATGTGAAGGATATATGACTCATAGGCACAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS-3UTR CAA 90 bp | CCAACATTGCTGAAGGAAGTGTTTCGTGACAAAGGAGTACTAGACACAGTTTTTCAGCGGTATTGCTGCTaGGAACTGACCTTGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PTLLKEVFRDKGVLDTVFQRYCC*ELTLAS Trigger: GGATGCCAAGGTCAGTTCCAAGCAGCAATACCGCTG...AAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS-3UTR CAA 90 bp | GCACACCAAGCCTTAAAACCATCTTTCCTTAAAAATGCCAACATTGCTGAAGGATCGTCCGGAAGGCACTaGGTAAGCCTCAACAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: AHQALKPSFLKNANIAEGSSGRH*VSLNNS Trigger: CGAGTTGTTGAGGCTTACCAAGTGCCTTCCGGACGA...TCCTTCAGCAATGTTGGCATTTTTAAGGAAAGATGGTTTTAAGGCTTGGTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS TCA 90 bp | AATTCTGCCCGGGATGATAGACGGTGTGTTCCTCTGCCCAACTATTaGAGTATCCTTTGGCTACTTTATCCTTCCATGAAAGGGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSARDDRRCVPLPNY*SILWLLYPSMKGFP Trigger: TGGAAACCCTTTCATGGAAGGATAAAGTAGCCAAAGGATACTTCAATAGTTGGGCAGAGGAACACACCGTCTATCATCCCGGGCAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CAA 90 bp | CCATCAGTACACGGCTCCTACCACAAAAACTCTGTGCCTATGAGTCATATATCCCGAGCCAGTGATTTCTaGAAAGAGGCTTCAGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSVHGSYHKNSVPMSHISRASDF*KEASVE Trigger: TTCAACTGAAGCCTCTTTCAAGAAATCACTGGCTCG...GGATATATGACTCATAGGCACAGAGTTTTTGTGGTAGGAGCCGTGTACTGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CAA 90 bp | AACTCTGTGCCTATGAGTCATATATCCTTCACATCAGAACAAGCCACAACTTTCATTATTGAGTCTCTCTaGCTCCCCCGTTCCCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSVPMSHISFTSEQATTFIIESL*LPRSHA Trigger: AGCATGGGAACGGGGGAGCAAGAGAGACTCAATAAT...GAAAGTTGTGGCTTGTTCTGATGTGAAGGATATATGACTCATAGGCACAGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CAA 90 bp | ACAACCATCACACTCCGGTGTAACCCACAGGAGACTGCACACCAAGCCTTAAAAATACTACAACCAATATaGGACTTTTTAACGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TTITLRCNPQETAHQALKILQPI*DFLTSQ Trigger: CTGGCTCGTTAAAAAGTCCAATATTGGTTGTAGTAT...TTTTAAGGCTTGGTGTGCAGTCTCCTGTGGGTTACACCGGAGTGTGATGGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CAA 90 bp | AATAGGGCAGGTAAAATGAAATCGGAAACTGTAAGTCACAAAACGGCTGCACGTGAAGGAGCGCCTCCATaGGTAGGAACTGTAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NRAGKMKSETVSHKTAAREGAPP*VGTVKS Trigger: AGATTTTACAGTTCCTACCAATGGAGGCGCTCCTTC...ACGTGCAGCCGTTTTGTGACTTACAGTTTCCGATTTCATTTTACCTGCCCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CAA 90 bp | CCAACATTGCTGAAGGAAGTGTTTCGTGACAAAGGAGTACTAGACACAGTTTTTTCTGAGTTTCCTGCCTaGCTAGTCGCAGGTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PTLLKEVFRDKGVLDTVFSEFPA*LVAGLK Trigger: TTTCAAACCTGCGACTAGCAAGGCAGGAAACTCAGA...AAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS TCA 90 bp | CATCCACGCTCAAAGCTTCTCCTAAGGACTTCTCGATGGCTTCATTaGGAGTCTTTAAAATTTCACCATCACAGAAAGGGGAACACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HPRSKLLLRTSRWLH*ESLKFHHHRKGNTL Trigger: TAAAGTGTTCCCCTTTCTGTGATGGTGAAATTTTAAAGACTCTCAATGAAGCCATCGAGAAGTCCTTAGGAGAAGCTTTGAGCGTGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CAA 90 bp | CCAACATTGCTGAAGGAAGTGTTTCGTGACAAAGGAGTACTAGACACAGTTTTTTTGGTCTCGCTCTCCTaGAATAATCAAATGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PTLLKEVFRDKGVLDTVFLVSLS*NNQMQM Trigger: CATCTGCATTTGATTATTCAAGGAGAGCGAGACCAA...AAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGG 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS TCA 90 bp | TCAAAAAGACGAATGTTCTCAGATATAGTCTCTAACTGGTATCTATaGAAGAACGTACAACACTCTTCGTGTCGCTCAAGGAAGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKRRMFSDIVSNWYL*KNVQHSSCRSRKDL Trigger: CAAATCCTTCCTTGAGCGACACGAAGAGTGTTGTACGTTCTTTCATAGATACCAGTTAGAGACTATATCTGAGAACATTCGTCTTTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS-3UTR CAA 90 bp | CCAACATTGCTGAAGGAAGTGTTTCGTGACAAAGGAGTACTAGACACAGTTTTTCTATTGAAGTATCCTTaGGCTACTTTATCCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PTLLKEVFRDKGVLDTVFLLKYP*ATLSFH Trigger: ATGGAAGGATAAAGTAGCCAAAGGATACTTCAATAG...AAAAACTGTGTCTAGTACTCCTTTGTCACGAAACACTTCCTTCAGCAATGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS TCA 72 bp | GATCACAGACGGCCGGTGAGCCCACCAGCAGGCACTTaGCTGGGCCGCTGGGTTCCGCACCCTGTTCGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: DHRRPVSPPAGT*LGRWVPHPVRP Trigger: CGGACGAACAGGGTGCGGAACCCAGCGGCCCAGTCAAGTGCCTGCTGGTGGGCTCACCGGCCGTCTGTGATC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CAA 90 bp | GGCATCTGGAGATCACAGACGGCCGGTGAGCCCACCAGCAGGCACTaGACTGGGCCGCTGGGTTCCGCACCCTGTTCGTCCGGAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GIWRSQTAGEPTSRH*TGPLGSAPCSSGRH Trigger: GTGCCTTCCGGACGAACAGGGTGCGGAACCCAGCGGCCCAGTCAAGTGCCTGCTGGTGGGCTCACCGGCCGTCTGTGATCTCCAGATGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 72 bp | CAGCTGAAGGCTGTGAGCTCCACGGACTCCACAAGCTaGATTTCCAGTGGCGCGGGCATCTGGAGATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QLKAVSSTDSTS*ISSGAGIWRSQ Trigger: CTGTGATCTCCAGATGCCCGCGCCACTGGAAATCCAGCTTGTGGAGTCCGTGGAGCTCACAGCCTTCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 72 bp | ATTGAGGACGTCTGGGCTGAAGGTCTCCAAGCAAGCTaGCTGCCGAGCCGGAAGCTTTCTGCGCTTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: IEDVWAEGLQAS*LPSRKLSALAH Trigger: ATGAGCAAGCGCAGAAAGCTTCCGGCTCGGCAGCCAGCTTGCTTGGAGACCTTCAGCCCAGACGTCCTCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056972.6 ENSMUST00000189685.2 |
||
| CDS CCA 72 bp | CTTGGCAAAGAGCTCAGACACGTCATTGAGGACGTCTaGGCTGAAGGTCTCCAAGCAAGCTGGCTGCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGKELRHVIEDV*AEGLQASWLPS Trigger: GCTCGGCAGCCAGCTTGCTTGGAGACCTTCAGCCCAGACGTCCTCAATGACGTGTCTGAGCTCTTTGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056972.6 ENSMUST00000189685.2 |
||
| CDS TCA 72 bp | CAAGAAAGGATGGGCAAGACCATCACATCTCCCCTGTaGAGCCGCCTCAGTGAGTGCAGCAGGCAGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: QERMGKTITSPL*SRLSECSRQSK Trigger: CTTGGACTGCCTGCTGCACTCACTGAGGCGGCTTCACAGGGGAGATGTGATGGTCTTGCCCATCCTTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CCA 72 bp | GTGCAGCAGGCAGTCCAAGAACAAATGCTGGTAGGCTaGGTCACCATCGTGAAGCAGGGAACAGCTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VQQAVQEQMLVG*VTIVKQGTAEG Trigger: GCCTTCAGCTGTTCCCTGCTTCACGATGGTGACCCAGCCTACCAGCATTTGTTCTTGGACTGCCTGCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS GCA 72 bp | ATTTTGCCTGCCTTGTTGGTGAAGGCCGTGTGCCTGTaGCACTCGTCCAGCTTCTTATCGCTCAGGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILPALLVKAVCL*HSSSFLSLRRF Trigger: GAACCTCCTGAGCGATAAGAAGCTGGACGAGTGGCACAGGCACACGGCCTTCACCAACAAGGCAGGCAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CAA 72 bp | CCGCTGGGTTCCGCACCCTGTTCGTCCGGAAGGCACTaGGTAAGCCTCAACAACTCGGATAATACTGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLGSAPCSSGRH*VSLNNSDNTDS Trigger: AGAGTCAGTATTATCCGAGTTGTTGAGGCTTACCAAGTGCCTTCCGGACGAACAGGGTGCGGAACCCAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS TCA 72 bp | CAAGACCATCACATCTCCCCTGTGAAGCCGCCTCAGTaGGTGCAGCAGGCAGTCCAAGAACAAATGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QDHHISPVKPPQ*VQQAVQEQMLV Trigger: TACCAGCATTTGTTCTTGGACTGCCTGCTGCACTCACTGAGGCGGCTTCACAGGGGAGATGTGATGGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS GCA 72 bp | CAGCCGGTCATCCGTAATCATCCTAAGATTGTCGTTTaGCTCGTGGTATGGATTCAGGCTGTTCGCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: QPVIRNHPKIVV*LVVWIQAVRHP Trigger: TGGGTGGCGAACAGCCTGAATCCATACCACGAGGCAAACGACAATCTTAGGATGATTACGGATGACCGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CCA 72 bp | CCATTGGTAGGAACTGTAAAATCTGCCGAGGGGCACTaGGGTGCAGCAGCTTGCTCAAGAGGTCATGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: PLVGTVKSAEGH*GAAACSRGHEH Trigger: ATGTTCATGACCTCTTGAGCAAGCTGCTGCACCCCAGTGCCCCTCGGCAGATTTTACAGTTCCTACCAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS CAA 90 bp | TGCAAGGTATTTGCCATCAGCCGGTCATCCGTAATCATCCTAAGATaGTCGTTTGCCTCGTGGTATGGATTCAGGCTGTTCGCCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CKVFAISRSSVIILR*SFASWYGFRLFATQ Trigger: CTGGGTGGCGAACAGCCTGAATCCATACCACGAGGCAAACGACAATCTTAGGATGATTACGGATGACCGGCTGATGGCAAATACCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
||
| CDS TCA 72 bp | AAAAGACGGGACAACAGCGGTATTGCTGCTTGGAACTaGCCTTGGCATCCACGCTCAAAGCTTCTCCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: KRRDNSGIAAWN*PWHPRSKLLLR Trigger: CCTTAGGAGAAGCTTTGAGCGTGGATGCCAAGGTCAGTTCCAAGCAGCAATACCGCTGTTGTCCCGTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS GCA 72 bp | GACTCTTCTGAAAAGACGGGACAACAGCGGTATTGCTaGTTGGAACTGACCTTGGCATCCACGCTCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: DSSEKTGQQRYC*LELTLASTLKA Trigger: AGCTTTGAGCGTGGATGCCAAGGTCAGTTCCAAGCAGCAATACCGCTGTTGTCCCGTCTTTTCAGAAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 72 bp | ACGTACAACACTCTTCGTGTCGCTCAAGGAAGGATTTaGGGATCACATGATGAGGAAAGAGCGCCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TYNTLRVAQGRI*GSHDEERAPSW Trigger: CCAGGAAGGCGCTCTTTCCTCATCATGTGATCCCCAAATCCTTCCTTGAGCGACACGAAGAGTGTTGTACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 72 bp | GTGGGACAAGAGAACGTGATAAATCTAAAACAGCCGTaGAGGACGAAGGTCAGGCCAGCCATAAACCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: VGQENVINLKQP*RTKVRPAINLV Trigger: CACGAGGTTTATGGCTGGCCTGACCTTCGTCCTCCACGGCTGTTTTAGATTTATCACGTTCTCTTGTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS GCA 72 bp | ATATCACCGGTATTATCTGGGCCGAAGTACCAGCAGTaGAAGGTATTTGCCATCAGCCGGTCATCCGTAATC | + |
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Preference number: 6 (lower is better) Translates to: ISPVLSGPKYQQ*KVFAISRSSVI Trigger: GATTACGGATGACCGGCTGATGGCAAATACCTTGCACTGCTGGTACTTCGGCCCAGATAATACCGGTGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS GCA 72 bp | ACTGACTCTTCTGAAAAGACGGGACAACAGCGGTATTaGTGCTTGGAACTGACCTTGGCATCCACGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TDSSEKTGQQRY*CLELTLASTLK Trigger: TTTGAGCGTGGATGCCAAGGTCAGTTCCAAGCAGCAATACCGCTGTTGTCCCGTCTTTTCAGAAGAGTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 72 bp | TCATCCGTAATCATCCTAAGATTGTCGTTTGCCTCGTaGTATGGATTCAGGCTGTTCGCCACCCAGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SSVIILRLSFAS*YGFRLFATQLH Trigger: ATGGAGCTGGGTGGCGAACAGCCTGAATCCATACCACGAGGCAAACGACAATCTTAGGATGATTACGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CCA 72 bp | TTCGGCAGTTTCTTTCCTTCTAAGACTTGCCACGACTaGTACTCAAGACTGGAAGCAGTCCCTTCAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FGSFFPSKTCHD*YSRLEAVPSRR Trigger: CCTCCTTGAAGGGACTGCTTCCAGTCTTGAGTACCAGTCGTGGCAAGTCTTAGAAGGAAAGAAACTGCCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CAA 72 bp | TCTTCTGAAAAGACGGGACAACAGCGGTATTGCTGCTaGGAACTGACCTTGGCATCCACGCTCAAAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSEKTGQQRYCC*ELTLASTLKAS Trigger: AGAAGCTTTGAGCGTGGATGCCAAGGTCAGTTCCAAGCAGCAATACCGCTGTTGTCCCGTCTTTTCAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CAA 72 bp | TTTGCCATCAGCCGGTCATCCGTAATCATCCTAAGATaGTCGTTTGCCTCGTGGTATGGATTCAGGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: FAISRSSVIILR*SFASWYGFRLF Trigger: GAACAGCCTGAATCCATACCACGAGGCAAACGACAATCTTAGGATGATTACGGATGACCGGCTGATGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS GCA 72 bp | ATTATCTGGGCCGAAGTACCAGCAGTGCAAGGTATTTaGCATCAGCCGGTCATCCGTAATCATCCTAAGATT | + |
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Preference number: 6 (lower is better) Translates to: IIWAEVPAVQGI*HQPVIRNHPKI Trigger: AATCTTAGGATGATTACGGATGACCGGCTGATGGCAAATACCTTGCACTGCTGGTACTTCGGCCCAGATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS GCA 72 bp | GGAATTCTGCCCGGGATGATAGACGGTGTGTTCCTCTaGCCAACTATTGAAGTATCCTTTGGCTACTTTATC | + |
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Preference number: 6 (lower is better) Translates to: GILPGMIDGVFL*PTIEVSFGYFI Trigger: GATAAAGTAGCCAAAGGATACTTCAATAGTTGGGCAGAGGAACACACCGTCTATCATCCCGGGCAGAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS TCA 72 bp | CGGGATGATAGACGGTGTGTTCCTCTGCCCAACTATTaGAGTATCCTTTGGCTACTTTATCCTTCCATGAAA | + |
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Preference number: 6 (lower is better) Translates to: RDDRRCVPLPNY*SILWLLYPSMK Trigger: TTTCATGGAAGGATAAAGTAGCCAAAGGATACTTCAATAGTTGGGCAGAGGAACACACCGTCTATCATCCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CAA 72 bp | TGCATAAAATATTGTACAGCGCAATCCCTTAGATTATaGAGTCTCTCTTGCTCCCCCGTTCCCATGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: CIKYCTAQSLRL*SLSCSPVPMLS Trigger: TGAGAGCATGGGAACGGGGGAGCAAGAGAGACTCAATAATCTAAGGGATTGCGCTGTACAATATTTTATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS CAA 72 bp | ACGGTGTGTTCCTCTGCCCAACTATTGAAGTATCCTTaGGCTACTTTATCCTTCCATGAAAGGGTTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: TVCSSAQLLKYP*ATLSFHERVSI Trigger: GATGGAAACCCTTTCATGGAAGGATAAAGTAGCCAAAGGATACTTCAATAGTTGGGCAGAGGAACACACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS TCA 72 bp | CGAATGTTCTCAGATATAGTCTCTAACTGGTATCTATaGAAGAACGTACAACACTCTTCGTGTCGCTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RMFSDIVSNWYL*KNVQHSSCRSR Trigger: CCTTGAGCGACACGAAGAGTGTTGTACGTTCTTTCATAGATACCAGTTAGAGACTATATCTGAGAACATTCG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS TCA 72 bp | TCAAAGCTTCTCCTAAGGACTTCTCGATGGCTTCATTaGGAGTCTTTAAAATTTCACCATCACAGAAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SKLLLRTSRWLH*ESLKFHHHRKG Trigger: CCCCTTTCTGTGATGGTGAAATTTTAAAGACTCTCAATGAAGCCATCGAGAAGTCCTTAGGAGAAGCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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| CDS TCA 72 bp | ACTATTGAAGTATCCTTTGGCTACTTTATCCTTCCATaGAAGGGTTTCCATCATCTTCCGTTCATTATAGGT | + |
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Preference number: 6 (lower is better) Translates to: TIEVSFGYFILP*KGFHHLPFIIG Trigger: ACCTATAATGAACGGAAGATGATGGAAACCCTTTCATGGAAGGATAAAGTAGCCAAAGGATACTTCAATAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056972.6 |
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