Pregenerated sensors for CMTR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024019Ensembl transcript IDs: ENSMUST00000024816.13, ENSMUST00000127695.2, ENSMUST00000129864.2, ENSMUST00000130052.9, ENSMUST00000130423.4, ENSMUST00000172516.9, ENSMUST00000234388.2, ENSMUST00000234911.2, ENSMUST00000235014.2, ENSMUST00000235031.2
Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACGGGAAAAGGTGGCCTGGGCTTGAAGTGGAGGTTCCAGGGGTATaGGGAATCATCTCCTCTTCCAGAGACAGGCAGGGCCAGGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: HGKRWPGLEVEVPGV*GIISSSRDRQGQGG Trigger: GCCTCCCTGGCCCTGCCTGTCTCTGGAAGAGGAGATGATTCCGCATACCCCTGGAACCTCCACTTCAAGCCCAGGCCACCTTTTCCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | GGTAGAGGATGGTCCTTACTCGGGGCAGGAAAGGCATTCTGTGGGTaGAGCGATGCTGCCACCTTCTGGGGTGCTGGAAGCAGAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GRGWSLLGAGKAFCG*SDAATFWGAGSRAR Trigger: CCTGGCTCTGCTTCCAGCACCCCAGAAGGTGGCAGCATCGCTCCACCCACAGAATGCCTTTCCTGCCCCGAGTAAGGACCATCCTCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR GCA 90 bp | TGGCACAGCAGCAGCTGCTTGCTGAGGATCTCCTGCAGGTTCTCCTaGCCCTCCACAGAGAAGCCCCCATCTGCCATCACAAAGTGGACG | + |
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Preference number: 1 (lower is better) Translates to: WHSSSCLLRISCRFS*PSTEKPPSAITKWT Trigger: CGTCCACTTTGTGATGGCAGATGGGGGCTTCTCTGTGGAGGGGCAGGAGAACCTGCAGGAGATCCTCAGCAAGCAGCTGCTGCTGTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR TCA 90 bp | CATGGGGTGCATGGGCAGGGTGGGGGCCCTAAAGGTGAGTCCCTCTaGGGTGCCAGTGTCAGGAAAGCTCAGTGCCTCTGTCTATTTCAG | + |
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Preference number: 1 (lower is better) Translates to: HGVHGQGGGPKGESL*GASVRKAQCLCLFQ Trigger: CTGAAATAGACAGAGGCACTGAGCTTTCCTGACACTGGCACCTCAGAGGGACTCACCTTTAGGGCCCCCACCCTGCCCATGCACCCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | GGGGAAACATCACCTGTGCGGACAACAGACAGGGCCATGAGGAACTaGCACAGCAGCAGCTGCTTGCTGAGGATCTCCTGCAGGTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GETSPVRTTDRAMRN*HSSSCLLRISCRFS Trigger: GGAGAACCTGCAGGAGATCCTCAGCAAGCAGCTGCTGCTGTGCCAGTTCCTCATGGCCCTGTCTGTTGTCCGCACAGGTGATGTTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR TCA 90 bp | TGCCACCCGCAGCTCCAGCCTGCCCTGGCCTGTGATTATTACCACTaGAGAAAATGCAGCATGCACGGGAAAAGGTGGCCTGGGCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: CHPQLQPALACDYYH*RKCSMHGKRWPGLE Trigger: TTCAAGCCCAGGCCACCTTTTCCCGTGCATGCTGCATTTTCTTCAGTGGTAATAATCACAGGCCAGGGCAGGCTGGAGCTGCGGGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR TCA 90 bp | CAAGCTCTGTGCCTGCCACCCGCAGCTCCAGCCTGCCCTGGCCTGTaGTTATTACCACTGAAGAAAATGCAGCATGCACGGGAAAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: QALCLPPAAPACPGL*LLPLKKMQHAREKV Trigger: CACCTTTTCCCGTGCATGCTGCATTTTCTTCAGTGGTAATAATCACAGGCCAGGGCAGGCTGGAGCTGCGGGTGGCAGGCACAGAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | TATGGCATCCCAGCACTTGCTGCTAGGATTGGGGTTGGGGGCTGGTaGAAGGGACCTCCCATGGTGGAATCAATTCCAACCTCACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: YGIPALAARIGVGGW*KGPPMVESIPTSQV Trigger: CACCTGTGAGGTTGGAATTGATTCCACCATGGGAGGTCCCTTCCACCAGCCCCCAACCCCAATCCTAGCAGCAAGTGCTGGGATGCCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | GCAGCTCACCAACATGTGCGATGTTCAGGTGAAGGAATTCTCACCTaGGGCTCATGCAGAATGTGGCCTCTTGTGGAGGCGGCTAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: AAHQHVRCSGEGILT*GSCRMWPLVEAASQ Trigger: CTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCACATGTTGGTGAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | TCCAAAATTCTTATGTACAATTCAGGAGGAAGGGAGATGTGCAGCTaGGAGGGCAAGCTCTGTGCCTGCCACCCGCAGCTCCAGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: SKILMYNSGGREMCS*EGKLCACHPQLQPA Trigger: GGCAGGCTGGAGCTGCGGGTGGCAGGCACAGAGCTTGCCCTCCCAGCTGCACATCTCCCTTCCTCCTGAATTGTACATAAGAATTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR GCA 90 bp | GGTGGAAGGGACCTCCCATGGTGGAATCAATTCCAACCTCACAGGTaGCTCAGTGCCCTATCTCCATGGAAACCAGTCTGGCACTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: GGRDLPWWNQFQPHR*LSALSPWKPVWHWH Trigger: ATGCCAGTGCCAGACTGGTTTCCATGGAGATAGGGCACTGAGGCACCTGTGAGGTTGGAATTGATTCCACCATGGGAGGTCCCTTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR GCA 90 bp | CACGCTCCTCTCGGTGGCCATCTTCACTGTCTTCGCCCTGCTCTATaGTTACTGGACTATGTGAGTCAGCCATCTCCAGCCACTAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: HAPLGGHLHCLRPAL*LLDYVSQPSPATRR Trigger: CCTTCTAGTGGCTGGAGATGGCTGACTCACATAGTCCAGTAAGCATAGAGCAGGGCGAAGACAGTGAAGATGGCCACCGAGAGGAGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR GCA 90 bp | GGAAGAACACGCTCCTCTCGGTGGCCATCTTCACTGTCTTCGCCCTaGTCTATGCTTACTGGACTATGTGAGTCAGCCATCTCCAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GRTRSSRWPSSLSSP*SMLTGLCESAISSH Trigger: GTGGCTGGAGATGGCTGACTCACATAGTCCAGTAAGCATAGAGCAGGGCGAAGACAGTGAAGATGGCCACCGAGAGGAGCGTGTTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR GCA 90 bp | ACAACTGGTGCCCTGTTCCTACAAGACACAGCTAACCTGGGGTTCTaGTTCACCCTCAACCTGTGCCCTGTCCAGTACAGACATGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: TTGALFLQDTANLGF*FTLNLCPVQYRHGV Trigger: CACCCCATGTCTGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGTCTTGTAGGAACAGGGCACCAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | TCAGCTATAAGCAGGGTCTCAGTGGGTCCTTGGAGAGGATGGAGCTaGGGAAACATCACCTGTGCGGACAACAGACAGGGCCATGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SAISRVSVGPWRGWS*GNITCADNRQGHEE Trigger: TTCCTCATGGCCCTGTCTGTTGTCCGCACAGGTGATGTTTCCCCAGCTCCATCCTCTCCAAGGACCCACTGAGACCCTGCTTATAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR TCA 90 bp | AGGTGCCAGTGTCAGGAAAGCTCAGTGCCTCTGTCTATTTCAGATTaGCGGGCTAGAGGAAAAGCTGTCCCGGTGTCGGAAGGACCTGGA | + |
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Preference number: 1 (lower is better) Translates to: RCQCQESSVPLSISD*RARGKAVPVSEGPG Trigger: TCCAGGTCCTTCCGACACCGGGACAGCTTTTCCTCTAGCCCGTCAATCTGAAATAGACAGAGGCACTGAGCTTTCCTGACACTGGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR GCA 90 bp | GGATGTTCCAAAATTCTTATGTACAATTCAGGAGGAAGGGAGATGTaGAGCTGGGAGGGCAAGCTCTGTGCCTGCCACCCGCAGCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GCSKILMYNSGGREM*SWEGKLCACHPQLQ Trigger: CTGGAGCTGCGGGTGGCAGGCACAGAGCTTGCCCTCCCAGCTGCACATCTCCCTTCCTCCTGAATTGTACATAAGAATTTTGGAACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | AAATATGGCATCCCAGCACTTGCTGCTAGGATTGGGGTTGGGGGCTaGTGGAAGGGACCTCCCATGGTGGAATCAATTCCAACCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: KYGIPALAARIGVGG*WKGPPMVESIPTSQ Trigger: CTGTGAGGTTGGAATTGATTCCACCATGGGAGGTCCCTTCCACCAGCCCCCAACCCCAATCCTAGCAGCAAGTGCTGGGATGCCATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | GTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCTTGTaGAGGCGGCTAGCCAGAGTCAGCAGAAGATCCTTTCTCCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: VKEFSPGAHAECGLL*RRLARVSRRSFLLS Trigger: AGACAGGAGAAAGGATCTTCTGCTGACTCTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | TGGTGGAAACAACTGGTGCCCTGTTCCTACAAGACACAGCTAACCTaGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCCAGTACAGAC | + |
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Preference number: 1 (lower is better) Translates to: WWKQLVPCSYKTQLT*GSASPSTCALSSTD Trigger: GTCTGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGTCTTGTAGGAACAGGGCACCAGTTGTTTCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR TCA 90 bp | ATGCTCACTGCTCCATTCAGGAGCCTGCCAAGTAAAGCCAGGCTGTaGAACATGAAGAATCGGCTGGAGGCAGCTCACCAACATGTGCGA | + |
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Preference number: 1 (lower is better) Translates to: MLTAPFRSLPSKARL*NMKNRLEAAHQHVR Trigger: TCGCACATGTTGGTGAGCTGCCTCCAGCCGATTCTTCATGTTTCACAGCCTGGCTTTACTTGGCAGGCTCCTGAATGGAGCAGTGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR GCA 90 bp | GGGCCATGTTCAGGAAAAAGGCCCACATCTACAGACACTGGTTTCTaGATCTCATGTCCCACCCCACCAGAACAACCTAGACTGGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: GPCSGKRPTSTDTGF*ISCPTPPEQPRLGV Trigger: CACACCCAGTCTAGGTTGTTCTGGTGGGGTGGGACATGAGATGCAGAAACCAGTGTCTGTAGATGTGGGCCTTTTTCCTGAACATGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | CTGAGACAGGAAGTCAAAGGGCAGGTTTTTAGGCTGCTCTTCCCCTaGAGCTGCCCAGTGCTTACCAGAGGTGGAAACTCAAGGAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: LRQEVKGQVFRLLFP*SCPVLTRGGNSRSN Trigger: ATTGCTCCTTGAGTTTCCACCTCTGGTAAGCACTGGGCAGCTCCAGGGGAAGAGCAGCCTAAAAACCTGCCCTTTGACTTCCTGTCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | ATAAGCCTTTGGGCTCCCTGTCTAGCAGATGGCAGTCTCAGGAGCTaGAGAAGCTTGGCTTCCACAAACACTCCCCTTCCTCAGTTACAC | + |
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Preference number: 1 (lower is better) Translates to: ISLWAPCLADGSLRS*RSLASTNTPLPQLH Trigger: GTGTAACTGAGGAAGGGGAGTGTTTGTGGAAGCCAAGCTTCTCCAGCTCCTGAGACTGCCATCTGCTAGACAGGGAGCCCAAAGGCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | CCGGAACTGTACTTTGATAAGCCTTTGGGCTCCCTGTCTAGCAGATaGCAGTCTCAGGAGCTGGAGAAGCTTGGCTTCCACAAACACTCC | + |
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Preference number: 1 (lower is better) Translates to: PELYFDKPLGSLSSR*QSQELEKLGFHKHS Trigger: GGAGTGTTTGTGGAAGCCAAGCTTCTCCAGCTCCTGAGACTGCCATCTGCTAGACAGGGAGCCCAAAGGCTTATCAAAGTACAGTTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | TACTTATCAGCTATAAGCAGGGTCTCAGTGGGTCCTTGGAGAGGATaGAGCTGGGGAAACATCACCTGTGCGGACAACAGACAGGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: YLSAISRVSVGPWRG*SWGNITCADNRQGH Trigger: ATGGCCCTGTCTGTTGTCCGCACAGGTGATGTTTCCCCAGCTCCATCCTCTCCAAGGACCCACTGAGACCCTGCTTATAGCTGATAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR CCA 90 bp | CAACCCCTGTACTTATCAGCTATAAGCAGGGTCTCAGTGGGTCCTTaGAGAGGATGGAGCTGGGGAAACATCACCTGTGCGGACAACAGA | + |
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Preference number: 1 (lower is better) Translates to: QPLYLSAISRVSVGP*RGWSWGNITCADNR Trigger: TCTGTTGTCCGCACAGGTGATGTTTCCCCAGCTCCATCCTCTCCAAGGACCCACTGAGACCCTGCTTATAGCTGATAAGTACAGGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR GCA 90 bp | TCAAAGGGCAGGTTTTTAGGCTGCTCTTCCCCTGGAGCTGCCCAGTaGTTACCAGAGGTGGAAACTCAAGGAGCAATTATACCCAGTACC | + |
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Preference number: 1 (lower is better) Translates to: SKGRFLGCSSPGAAQ*LPEVETQGAIIPST Trigger: GGTACTGGGTATAATTGCTCCTTGAGTTTCCACCTCTGGTAAGCACTGGGCAGCTCCAGGGGAAGAGCAGCCTAAAAACCTGCCCTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR TCA 90 bp | AGTCGACAAATTCCAGAGGGAATGACTCTGACAAGTCCTAAGCGCTaGCCTGCCCTTGAGCAGCTGCTTTTCAGGTTGACTCCAGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SRQIPEGMTLTSPKR*PALEQLLFRLTPVL Trigger: GAGAACTGGAGTCAACCTGAAAAGCAGCTGCTCAAGGGCAGGTCAGCGCTTAGGACTTGTCAGAGTCATTCCCTCTGGAATTTGTCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR TCA 90 bp | AGAGGTGGAAACTCAAGGAGCAATTATACCCAGTACCCAAAGCGCTaGTGTTTGAAAGGTACTGGGTCCACACTCCTTCCCGACCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: RGGNSRSNYTQYPKR*CLKGTGSTLLPDLP Trigger: TGGCAGGTCGGGAAGGAGTGTGGACCCAGTACCTTTCAAACATCAGCGCTTTGGGTACTGGGTATAATTGCTCCTTGAGTTTCCACCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR GCA 90 bp | GTGGACGCCCTTGCGATCTGTGTTGTCCAGGACAAAATTCCGAAATaGATTGATGTTCTCTGGGCGGGTGATATCTCCATCTCCATCGAC | + |
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Preference number: 1 (lower is better) Translates to: VDALAICVVQDKIPK*IDVLWAGDISISID Trigger: GTCGATGGAGATGGAGATATCACCCGCCCAGAGAACATCAATGCATTTCGGAATTTTGTCCTGGACAACACAGATCGCAAGGGCGTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR TCA 90 bp | GCAATAAAGAGCCCCAGGCTCTGCTGTCTGGCAACTATTTCCTGCTaGCAAGGTGAGGGTGAGCAAGGGAGGCACTCTTATTTCAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: AIKSPRLCCLATISC*QGEGEQGRHSYFKD Trigger: ATCTTTGAAATAAGAGTGCCTCCCTTGCTCACCCTCACCTTGTCAGCAGGAAATAGTTGCCAGACAGCAGAGCCTGGGGCTCTTTATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR TCA 90 bp | TTCCATCTTTTTCCTCCCAGAGAAAGAGCTAAAGCTGCTTCGACATaGGAACCGGAAGAACACGCTCCTCTCGGTGGCCATCTTCACTGT | + |
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Preference number: 1 (lower is better) Translates to: FHLFPPRERAKAAST*EPEEHAPLGGHLHC Trigger: ACAGTGAAGATGGCCACCGAGAGGAGCGTGTTCTTCCGGTTCTCATGTCGAAGCAGCTTTAGCTCTTTCTCTGGGAGGAAAAAGATGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CCA 90 bp | AGTCAGCAGAAGATCCTTTCTCCTGTCTCGTCTAGTGACAGTAATTaGTCTGAAGCCTCTGCTATGTTAGTCACACAGACTGATCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SQQKILSPVSSSDSN*SEASAMLVTQTDPG Trigger: TCCAGGATCAGTCTGTGTGACTAACATAGCAGAGGCTTCAGACCAATTACTGTCACTAGACGAGACAGGAGAAAGGATCTTCTGCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR TCA 90 bp | CAAAGCTGTTGCCATTCCTCCCTCTTACAGAGACAGGAAATGGAGTaGCTGACTATAGACAAATCAAAGCAGATCGCTATGTACCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: QSCCHSSLLQRQEME*LTIDKSKQIAMYLL Trigger: TAGGAGGTACATAGCGATCTGCTTTGATTTGTCTATAGTCAGTCACTCCATTTCCTGTCTCTGTAAGAGGGAGGAATGGCAACAGCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | TCGGAAGGACCTGGAGGCCGTGACCTCCCAGCTTTACAGGGCAGAGCTCAGTCCGGAGGAAGGGAGATGTaGAGCTGGGAGGGCAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SEGPGGRDLPALQGRAQSGGREM*SWEGKL Trigger: GAGCTTGCCCTCCCAGCTGCACATCTCCCTTCCTCC...GGACTGAGCTCTGCCCTGTAAAGCTGGGAGGTCACGGCCTCCAGGTCCTTCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | CGCCACGAGGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGCTGTGGGTGGAGCGATaGTGCCACCTTCTGGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RHEECSGPGTGSAVLFPLLWVER*CHLLGC Trigger: GCACCCCAGAAGGTGGCAGCATCGCTCCACCCACAG...CAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCCTCGTGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | TCGGAAGGACCTGGAGGCCGTGACCTCCCAGCTTTACAGGGCAGAGCTCAGTCCGATGCTGCCACCTTCTaGGGTGCTGGAAGCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SEGPGGRDLPALQGRAQSDAATF*GAGSRA Trigger: GGCTCTGCTTCCAGCACCCCAGAAGGTGGCAGCATC...GGACTGAGCTCTGCCCTGTAAAGCTGGGAGGTCACGGCCTCCAGGTCCTTCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGGGGGTTGGGGGCTGGTaGAAGGGACCTCCCATGGTG | + |
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Preference number: 2 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSGVGGW*KGPPMV Trigger: CACCATGGGAGGTCCCTTCCACCAGCCCCCAACCCC...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCTGCGCTGACCTGCCCTTaGGCAGCTGCTTTTCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: QSPAPSALRLELWSAESSALTCP*AAAFQV Trigger: AACCTGAAAAGCAGCTGCTCAAGGGCAGGTCAGCGC...AGAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | CGCCACGAGGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGGGCAGGTTTTTAGGCTaGTCTTCCCCTGGAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RHEECSGPGTGSAVLFPLGRFLG*SSPGAA Trigger: GGCAGCTCCAGGGGAAGAGCAGCCTAAAAACCTGCC...CAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCCTCGTGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGGCTCATGCAGAATGTGGCCTCTTGTGGAGGCGGCTAGCCAGAGTCAGCAGACTGATCCTGGACTaGCACAGTGCTGCCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: PGAHAECGLLWRRLARVSRLILD*HSAAMP Trigger: TGGCATGGCAGCACTGTGGCAGTCCAGGATCAGTCT...GCTGACTCTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | CGCCACGAGGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGCCATGGAAACCAGTCTaGCACTGGCATGGGGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: RHEECSGPGTGSAVLFPLPWKPV*HWHGAL Trigger: TAGGGCCCCATGCCAGTGCCAGACTGGTTTCCATGG...CAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCCTCGTGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | AGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCTCGGCCTGGGCTTGAAGTaGAGGTTCCAGGGGTATGCG | + |
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Preference number: 2 (lower is better) Translates to: RCVPSHLYSAQSRLPVLLGLGLK*RFQGYA Trigger: CGCATACCCCTGGAACCTCCACTTCAAGCCCAGGCC...GAGGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGGCTCATGCAGAATGTGGCCTCTTGTGGAGGCGGCTAGCCAGAGTCAGCTTCCAACCTCACAGGTaGCTCAGTGCCCTATCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PGAHAECGLLWRRLARVSFQPHR*LSALSP Trigger: TGGAGATAGGGCACTGAGGCACCTGTGAGGTTGGAA...GCTGACTCTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | AGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCTCAGAGCTCCTTGGGAATaGGGAGGAGCCCATCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: RCVPSHLYSAQSRLPVLLRAPWE*GGAHLP Trigger: AGGGAGATGGGCTCCTCCCCATTCCCAAGGAGCTCT...GAGGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGCTCATGCAGAATGTGGCCTCTTGTGGAGGCGGCTAGCCAGAGTCAGCAGTTACACAGCACTGTaGACAACAGCAGCCCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PGAHAECGLLWRRLARVSSYTAL*TTAAQH Trigger: GTGCTGGGCTGCTGTTGTCCACAGTGCTGTGTAACT...GCTGACTCTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | AGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCTCGGCTCATGCAGAATGTaGCCTCTTGTGGAGGCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RCVPSHLYSAQSRLPVLLGSCRM*PLVEAA Trigger: AGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCC...GAGGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAGCTGTCCTGAAGGATGAGCACGGTAGAGCCTCACACATACCGTACTGTGCCTGCAGGTGCCCATaGCCAGCAAGTCTGGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: GPAVLKDEHGRASHIPYCACRCP*PASLAM Trigger: CATTGCCAGACTTGCTGGCCATGGGCACCTGCAGGC...ACAGTACGGTATGTGTGAGGCTCTACCGTGCTCATCCTTCAGGACAGCTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGCTCTTCCCCTGGAGCTaGCCAGTGCTTACCAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSLFPWS*PVLTRG Trigger: ACCTCTGGTAAGCACTGGGCAGCTCCAGGGGAAGAG...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCCCAACCCAAAGCTGTTaGCATTCCTCCCTCTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: AEPSTLCPEARTVVCRELPTQSC*HSSLLQ Trigger: CTGTAAGAGGGAGGAATGGCAACAGCTTTGGGTTGG...GAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAGCTGTCCTGAAGGATGAGCACGGTAGAGCCTCACACATACCGTACTGTCCCGAAAGAGCTCCTTaGGAATGGGGAGGAGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GPAVLKDEHGRASHIPYCPERAP*EWGGAH Trigger: ATGGGCTCCTCCCCATTCCCAAGGAGCTCTTTCGGG...ACAGTACGGTATGTGTGAGGCTCTACCGTGCTCATCCTTCAGGACAGCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCAGGGACCTCCCATGGTaGAATCAATTCCAACCTCAC | + |
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Preference number: 2 (lower is better) Translates to: AEPSTLCPEARTVVCRELRDLPW*NQFQPH Trigger: GTGAGGTTGGAATTGATTCCACCATGGGAGGTCCCT...GAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | TCAGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCACACGCTCCTCTCGGTaGCCATCTTCACTGTCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: SDVSHPTSTQPKAGCQFSTRSSR*PSSLSS Trigger: CGAAGACAGTGAAGATGGCCACCGAGAGGAGCGTGT...GGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGGCTAGCTCAGAACTCTaGCAAGAGCTTCAGGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSASSEL*QELQVA Trigger: GGCCACCTGAAGCTCTTGGCAGAGTTCTGAGCTAGC...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGCCGGGTTTTGGGATGCGACAGTGCCTGGAAGGAGACGCCTCTTTTCAAGTGCTGCCATGCCATaGAGTGAGTTGTGTGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DRAGFWDATVPGRRRLFSSAAMP*SELCGE Trigger: CTCACCACACAACTCACTGCATGGCATGGCAGCACT...TGAAAAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | TCCATCTTTTTCCTCCCAGAGAAAGAGCTAAAGCTGCTTCGACATGAGAACCGGAGGGCCAGGGAGGCCTaGAGGTGCCCATGGCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SIFFLPEKELKLLRHENRRAREA*RCPWPA Trigger: TGCTGGCCATGGGCACCTGCAGGCCTCCCTGGCCCT...CCGGTTCTCATGTCGAAGCAGCTTTAGCTCTTTCTCTGGGAGGAAAAAGATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | AAGGTAGAACCTGTACCCAATGGAGCAGCTGAATTCAGGAGCAGTGTGAGCCCGGGCCGGGTTTTGGGATaGGACAGTGCCTGGAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KVEPVPNGAAEFRSSVSPGRVLG*DSAWKE Trigger: CTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCC...CGGGCTCACACTGCTCCTGAATTCAGCTGCTCCATTGGGTACAGGTTCTACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCGCCTTCATATTTGGGTaGCCTAGTAGAAATGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AEPSTLCPEARTVVCRELAFIFG*PSRNGA Trigger: TGCCCCATTTCTACTAGGCCACCCAAATATGAAGGC...GAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 90 bp | TGGGCTCCCTGTCTAGCAGATGGCAGTCTCAGGAGCTGGAGAAGCTaGGCTTCCACAAACACTCCCCTTCCTCAGTTACACAGCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: WAPCLADGSLRSWRS*ASTNTPLPQLHSTV Trigger: CACAGTGCTGTGTAACTGAGGAAGGGGAGTGTTTGTGGAAGCCAAGCTTCTCCAGCTCCTGAGACTGCCATCTGCTAGACAGGGAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 90 bp | CAGGTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCTaGTGGAGGCGGCTAGCCAGAGTCAGCAGAAGATCCTTTCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QVKEFSPGAHAECGL*WRRLARVSRRSFLL Trigger: CAGGAGAAAGGATCTTCTGCTGACTCTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAGCTGTCCTGAAGGATGAGCACGGTAGAGCCTCACACATACCGTACTGTAGCTCCAGCCTGCCCTaGCCTGTGATTATTACCACT | + |
|
Preference number: 2 (lower is better) Translates to: GPAVLKDEHGRASHIPYCSSSLP*PVIITT Trigger: AGTGGTAATAATCACAGGCCAGGGCAGGCTGGAGCT...ACAGTACGGTATGTGTGAGGCTCTACCGTGCTCATCCTTCAGGACAGCTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | ACACAGCTAACCTGGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCCAGTACACCCACAGGAGGTCTCTaGAGAAGGAGAAACACACCC | + |
|
Preference number: 2 (lower is better) Translates to: TQLTWGSASPSTCALSSTPTGGL*RRRNTP Trigger: GGGTGTGTTTCTCCTTCTCCAGAGACCTCCTGTGGG...TGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | ACACAGCTAACCTGGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCCAGTACAAAGAGCCCCAGGCTCTaGTGTCTGGCAACTATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TQLTWGSASPSTCALSSTKSPRL*CLATIS Trigger: GGAAATAGTTGCCAGACAGCAGAGCCTGGGGCTCTT...TGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | CCTGTACTTATCAGCTATAAGCAGGGTCTCAGTGGGTCCTTGGAGAGGATGGAGTTGCTGAGGATCTCCTaGAGGTTCTCCTGCCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PVLISYKQGLSGSLERMELLRIS*RFSCPS Trigger: GGAGGGGCAGGAGAACCTGCAGGAGATCCTCAGCAA...CTCCATCCTCTCCAAGGACCCACTGAGACCCTGCTTATAGCTGATAAGTACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR-3UTR CCA 90 bp | TGCGATGTTCAGGTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCTATGACAGCTGCTCCTaGCCAGCATGTGATGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: CDVQVKEFSPGAHAECGLYDSCS*PACDGG Trigger: CCCTCCATCACATGCTGGCCAGGAGCAGCTGTCATA...GAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGTGCCCATGGCCAGCAAGTCTGGCAATGACCAGACTGACATGGTGACAGAAGGAATTCTCACCTaGGGCTCATGCAGAATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LQVPMASKSGNDQTDMVTEGILT*GSCRMW Trigger: CCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTC...TGTCACCATGTCAGTCTGGTCATTGCCAGACTTGCTGGCCATGGGCACCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | AAATGCATTGATGTTCTCTGGGCGGGTGATATCTCCATCTCCATCGACCCCACCGCTCGAAGAGCTCGCTaGAGGCCGAGTAGAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KCIDVLWAGDISISIDPTARRAR*RPSRSP Trigger: AGGACTTCTACTCGGCCTCCAGCGAGCTCTTCGAGC...GGTGGGGTCGATGGAGATGGAGATATCACCCGCCCAGAGAACATCAATGCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACAGAGAAGCCCCCATCTGCCATCACAAAGTGGACGCCCTTGCGATCTGTGCATTGATGTTCTCTaGGCGGGTGATATCTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: PPQRSPHLPSQSGRPCDLCIDVL*AGDISI Trigger: GATGGAGATATCACCCGCCCAGAGAACATCAATGCA...CAGATCGCAAGGGCGTCCACTTTGTGATGGCAGATGGGGGCTTCTCTGTGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR CAA 90 bp | TTAGGTGCAAATATGGCATCCCAGCACTTGCTGCTAGGATTGGGGTaGGGGGCTGGTGGAAGGGACCTCCCATGGTGGAATCAATTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LGANMASQHLLLGLG*GAGGRDLPWWNQFQ Trigger: TTGGAATTGATTCCACCATGGGAGGTCCCTTCCACCAGCCCCCAACCCCAATCCTAGCAGCAAGTGCTGGGATGCCATATTTGCACCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 90 bp | CTTAGGATTATGAGGGTCTGGGCAGATGAAAGACAGGGCCGGGTTTaGGGATGCGACAGTGCCTGGAAGGAGACGCCTCTTTTCATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRIMRVWADERQGRV*GCDSAWKETPLFIR Trigger: TCTGATGAAAAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTCTTTCATCTGCCCAGACCCTCATAATCCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR TCA 90 bp | TGCGATGTTCAGGTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCCTCCTGGCCAGCATGTaGTGGAGGGCCTTCATATTT | + |
|
Preference number: 2 (lower is better) Translates to: CDVQVKEFSPGAHAECGLLLASM*WRAFIF Trigger: AAATATGAAGGCCCTCCATCACATGCTGGCCAGGAG...GAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR TCA 90 bp | AAGGTAGAACCTGTACCCAATGGAGCAGCTGAATTCAGGAGCAGTGTGAGCCCGGCTTACTGGACTATGTaGGTCAGCCATCTCCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: KVEPVPNGAAEFRSSVSPAYWTM*VSHLQP Trigger: TGGCTGGAGATGGCTGACTCACATAGTCCAGTAAGC...CGGGCTCACACTGCTCCTGAATTCAGCTGCTCCATTGGGTACAGGTTCTACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAGTACACAGGTGGAAACAACTGGTaGCCTGTTCCTACAAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: GVLRTWDWLCSAFSLEYTGGNNW*PVPTRH Trigger: GTGTCTTGTAGGAACAGGGCACCAGTTGTTTCCACC...TGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | ACACAGCTAACCTGGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCCAGTACAGAGCTTCAGGTGGCCTaGACTGCTAGAGTAACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: TQLTWGSASPSTCALSSTELQVA*TARVTF Trigger: GAAAGTTACTCTAGCAGTCCAGGCCACCTGAAGCTC...TGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 90 bp | AAGCCCCCATCTGCCATCACAAAGTGGACGCCCTTGCGATCTGTGTaGTCCAGGACAAAATTCCGAAATGCATTGATGTTCTCTGGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: KPPSAITKWTPLRSV*SRTKFRNALMFSGR Trigger: CCGCCCAGAGAACATCAATGCATTTCGGAATTTTGTCCTGGACAACACAGATCGCAAGGGCGTCCACTTTGTGATGGCAGATGGGGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR CAA 90 bp | CCCTCCACAGAGAAGCCCCCATCTGCCATCACAAAGTGGACGCCCTaGCGATCTGTGTTGTCCAGGACAAAATTCCGAAATGCATTGATG | + |
|
Preference number: 2 (lower is better) Translates to: PSTEKPPSAITKWTP*RSVLSRTKFRNALM Trigger: CATCAATGCATTTCGGAATTTTGTCCTGGACAACACAGATCGCAAGGGCGTCCACTTTGTGATGGCAGATGGGGGCTTCTCTGTGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGAGGACAGGTAATGACCCTCTAAGCCAAGGCAGAATGGTCCCTAACTTTGCCACAGTGCTGCCATaGCATGCAGTGAGTTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VLRTGNDPLSQGRMVPNFATVLP*HAVSCV Trigger: CACACAACTCACTGCATGGCATGGCAGCACTGTGGC...AAAGTTAGGGACCATTCTGCCTTGGCTTAGAGGGTCATTACCTGTCCTCAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGCTAAGGGAGAAAGAATaGTCACTGCTCCATTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSLREKE*SLLHSG Trigger: TCCTGAATGGAGCAGTGAGCATTCTTTCTCCCTTAG...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR TCA 90 bp | TGCGATGTTCAGGTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCCCTAGGGAGCCTGCATaGACATCTCTTGAAAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: CDVQVKEFSPGAHAECGLPREPA*TSLERD Trigger: ATCTCTTTCAAGAGATGTTCATGCAGGCTCCCTAGG...GAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR TCA 90 bp | ACACAGCTAACCTGGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCCAGTACAAGAAACACACCCTCATaGACAAAGCCTCCAAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: TQLTWGSASPSTCALSSTRNTPS*TKPPSM Trigger: CATACTTGGAGGCTTTGTTCATGAGGGTGTGTTTCT...TGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGTCTAGTGACAGTAATTaGTCTGAAGCCTCTGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSSSDSN*SEASAM Trigger: CATAGCAGAGGCTTCAGACCAATTACTGTCACTAGA...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | TGCGATGTTCAGGTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCTTCACCCCCAAGTTCTaGTTTATACCGGAACTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: CDVQVKEFSPGAHAECGLFTPKF*FIPELY Trigger: GTACAGTTCCGGTATAAAGCAGAACTTGGGGGTGAA...GAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | ACACAGCTAACCTGGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCCAGTACAGTCAGGAAAGCTCAGTaGCTCTGTCTATTTCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: TQLTWGSASPSTCALSSTVRKAQ*LCLFQI Trigger: AATCTGAAATAGACAGAGGCACTGAGCTTTCCTGAC...TGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGTCCAAAGGAGGAAGCAGTGAAACAGTAACAAGGGGTCTGTATTCTTTGAGGCTGCTCTTCCCCTaGAGCTGCCCAGTGCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: LLSKGGSSETVTRGLYSLRLLFP*SCPVLT Trigger: GGTAAGCACTGGGCAGCTCCAGGGGAAGAGCAGCCT...CAAAGAATACAGACCCCTTGTTACTGTTTCACTGCTTCCTCCTTTGGACAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGTGCATGAACATCTCTTaGAAGAGATTTCCCATTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSCMNIS*KRFPIR Trigger: TCTAATGGGAAATCTCTTTCAAGAGATGTTCATGCA...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGAGGACAGGTAATGACCCTCTAAGCCAAGGCAGAATGGTCCCTAACTTTGCTAGAACTGTGGTCTaGAGAGAGCTCTTCAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: VLRTGNDPLSQGRMVPNFARTVV*RELFRC Trigger: ACATCTGAAGAGCTCTCTGCAGACCACAGTTCTAGC...AAAGTTAGGGACCATTCTGCCTTGGCTTAGAGGGTCATTACCTGTCCTCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCATCTTCACTGTCTTCGCCCTGCTCTATGCTTACTGGACTATGTGAGTGACAAACTCCAGGATTaGGGTGAAGAAAAGACCACA | + |
|
Preference number: 2 (lower is better) Translates to: GGHLHCLRPALCLLDYVSDKLQD*GEEKTT Trigger: TGTGGTCTTTTCTTCACCCCAATCCTGGAGTTTGTC...ACTCACATAGTCCAGTAAGCATAGAGCAGGGCGAAGACAGTGAAGATGGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGAGGACAGGTAATGACCCTCTAAGCCAAGGCAGAATGGTCCCTAACTTTACTCCAGGATTGGGGTaGAGAAAAGACCACAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VLRTGNDPLSQGRMVPNFTPGLG*RKDHKK Trigger: TTTCTTGTGGTCTTTTCTTCACCCCAATCCTGGAGT...AAAGTTAGGGACCATTCTGCCTTGGCTTAGAGGGTCATTACCTGTCCTCAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCATCTTCACTGTCTTCGCCCTGCTCTATGCTTACTGGACTATGTGAGTAGAAACAACTTTGATTaGTATGACAGCTGCTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GGHLHCLRPALCLLDYVSRNNFD*YDSCSW Trigger: CCAGGAGCAGCTGTCATACCAATCAAAGTTGTTTCT...ACTCACATAGTCCAGTAAGCATAGAGCAGGGCGAAGACAGTGAAGATGGCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTGTCCAAAGGAGGAAGCAGTGAAACAGTAACAAGGGGTCTGTATTCTTTGGGCAGTCTCAGGAGCTaGAGAAGCTTGGCTTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: LLSKGGSSETVTRGLYSLGSLRS*RSLAST Trigger: TGTGGAAGCCAAGCTTCTCCAGCTCCTGAGACTGCC...CAAAGAATACAGACCCCTTGTTACTGTTTCACTGCTTCCTCCTTTGGACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR-3UTR TCA 90 bp | GCTCATTCACCCCCAAGTTCTGCTTTATACCGGAACTGTACTTTGATAAGCCTTAGCTGCTTTTCAGGTTaGCTCCAGTTCTCAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: AHSPPSSALYRNCTLISLSCFSG*LQFSDS Trigger: GCTGTCTGAGAACTGGAGTCAACCTGAAAAGCAGCT...AAGGCTTATCAAAGTACAGTTCCGGTATAAAGCAGAACTTGGGGGTGAATGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR TCA 90 bp | GCTCATTCACCCCCAAGTTCTGCTTTATACCGGAACTGTACTTTGATAAGCCTTACTTTCTGTTACTGCTaGGACAGGAAGTCAAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: AHSPPSSALYRNCTLISLTFCYC*DRKSKG Trigger: GCCCTTTGACTTCCTGTCTCAGCAGTAACAGAAAGT...AAGGCTTATCAAAGTACAGTTCCGGTATAAAGCAGAACTTGGGGGTGAATGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTGAGGACAGGTAATGACCCTCTAAGCCAAGGCAGAATGGTCCCTAACTTTCAGCACAGAGCCACATaGGCAGTAAAAATATGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VLRTGNDPLSQGRMVPNFQHRAT*AVKICL Trigger: TAAACATATTTTTACTGCTCATGTGGCTCTGTGCTG...AAAGTTAGGGACCATTCTGCCTTGGCTTAGAGGGTCATTACCTGTCCTCAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR TCA 90 bp | TCCATCTTTTTCCTCCCAGAGAAAGAGCTAAAGCTGCTTCGACATGAGAACCGGTGTGATTATTACCACTaGAGAAAATGCAGCATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SIFFLPEKELKLLRHENRCDYYH*RKCSMH Trigger: GTGCATGCTGCATTTTCTTCAGTGGTAATAATCACA...CCGGTTCTCATGTCGAAGCAGCTTTAGCTCTTTCTCTGGGAGGAAAAAGATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | AGGAAGGGAGATGTGCAGCTGGGAGGGCAAGCTCTGTaGCTGCCACCCGCAGCTCCAGCCTGCCCTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RKGDVQLGGQAL*LPPAAPACPGL Trigger: CAGGCCAGGGCAGGCTGGAGCTGCGGGTGGCAGGCACAGAGCTTGCCCTCCCAGCTGCACATCTCCCTTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | CCCTCAACCTGTGCCCTGTCCAGTACAGACATGGGGTaGATGGGCAGGGTGGGGGCCCTAAAGGTGAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSTCALSSTDMG*MGRVGALKVSP Trigger: GGGACTCACCTTTAGGGCCCCCACCCTGCCCATGCACCCCATGTCTGTACTGGACAGGGCACAGGTTGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | ACTCGGGGCAGGAAAGGCATTCTGTGGGTGGAGCGATaGTGCCACCTTCTGGGGTGCTGGAAGCAGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TRGRKGILWVER*CHLLGCWKQSQ Trigger: CTGGCTCTGCTTCCAGCACCCCAGAAGGTGGCAGCATCGCTCCACCCACAGAATGCCTTTCCTGCCCCGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGGCCGGGTTTTGGGATGCGACAGTGCCTGGAAGGAGACGCCTCTTTTCACTGCTAGGATTGGGGTaGGGGGCTGGTGGAAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DRAGFWDATVPGRRRLFSLLGLG*GAGGRD Trigger: GTCCCTTCCACCAGCCCCCAACCCCAATCCTAGCAG...TGAAAAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | CAGGAGCAGTGTGAGCCCGAGGAGGCCCAGCTGTCCTaGAGGATGAGCACGGTAGAGCCTCACACATACCGT | + |
|
Preference number: 3 (lower is better) Translates to: QEQCEPEEAQLS*RMSTVEPHTYR Trigger: ACGGTATGTGTGAGGCTCTACCGTGCTCATCCTTCAGGACAGCTGGGCCTCCTCGGGCTCACACTGCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | CATGGGCAGGGTGGGGGCCCTAAAGGTGAGTCCCTCTaGGGTGCCAGTGTCAGGAAAGCTCAGTGCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HGQGGGPKGESL*GASVRKAQCLC Trigger: ACAGAGGCACTGAGCTTTCCTGACACTGGCACCTCAGAGGGACTCACCTTTAGGGCCCCCACCCTGCCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | ACAGACAGGGCCATGAGGAACTGGCACAGCAGCAGCTaGTTGCTGAGGATCTCCTGCAGGTTCTCCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TDRAMRNWHSSS*LLRISCRFSCP Trigger: GGGGCAGGAGAACCTGCAGGAGATCCTCAGCAAGCAGCTGCTGCTGTGCCAGTTCCTCATGGCCCTGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
||
| 3UTR CCA 72 bp | AGGATGGTCCTTACTCGGGGCAGGAAAGGCATTCTGTaGGTGGAGCGATGCTGCCACCTTCTGGGGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RMVLTRGRKGIL*VERCCHLLGCW Trigger: CCAGCACCCCAGAAGGTGGCAGCATCGCTCCACCCACAGAATGCCTTTCCTGCCCCGAGTAAGGACCATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTAGTGGAGAGGAAGGAGCAGCTAGAGCCACTGCTAGCTCAGAACTCTGCCCCCGAAAGAGCTCCTaGGGAATGGGGAGGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PPSGEEGAARATASSELCPRKSS*GMGRSP Trigger: TGGGCTCCTCCCCATTCCCAAGGAGCTCTTTCGGGG...GCAGAGTTCTGAGCTAGCAGTGGCTCTAGCTGCTCCTTCCTCTCCACTAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR CAA 90 bp | TCAGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCCACTTGCTGCTAGGATaGGGGTTGGGGGCTGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SDVSHPTSTQPKAGCQFSHLLLG*GLGAGG Trigger: TCCACCAGCCCCCAACCCCAATCCTAGCAGCAAGTG...GGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR CAA 90 bp | TCAGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCAAAGGTGGCCTGGGCTaGAAGTGGAGGTTCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SDVSHPTSTQPKAGCQFSKGGLG*KWRFQG Trigger: CCCCTGGAACCTCCACTTCAAGCCCAGGCCACCTTT...GGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | AGGTGGCCTGGGCTTGAAGTGGAGGTTCCAGGGGTATaGGGAATCATCTCCTCTTCCAGAGACAGGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RWPGLEVEVPGV*GIISSSRDRQG Trigger: GCCCTGCCTGTCTCTGGAAGAGGAGATGATTCCGCATACCCCTGGAACCTCCACTTCAAGCCCAGGCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | CCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTaGAGAGAGCTCTTCAGATGTGTCCCATCCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSTLCPEARTVV*RELFRCVPSHL Trigger: GAGGTGGGATGGGACACATCTGAAGAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | ACGCCACGAGGAGTGCTCAGGACCTGGGACTGGCTCTaGAGTGCTTTTTCCCTTGAGTACACACCACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TPRGVLRTWDWL*SAFSLEYTPQG Trigger: CCCCTGTGGTGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCCTCGTGGCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | AGCAGCTGCTTGCTGAGGATCTCCTGCAGGTTCTCCTaGCCCTCCACAGAGAAGCCCCCATCTGCCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: SSCLLRISCRFS*PSTEKPPSAIT Trigger: TGTGATGGCAGATGGGGGCTTCTCTGTGGAGGGGCAGGAGAACCTGCAGGAGATCCTCAGCAAGCAGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGGCCGGGTTTTGGGATGCGACAGTGCCTGGAAGGAGACGCCTCTTTTCAAGGAGCTGGAGAAGCTaGGCTTCCACAAACACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: DRAGFWDATVPGRRRLFSRSWRS*ASTNTP Trigger: GGGAGTGTTTGTGGAAGCCAAGCTTCTCCAGCTCCT...TGAAAAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | TGCCTGCCACCCGCAGCTCCAGCCTGCCCTGGCCTGTaGTTATTACCACTGAAGAAAATGCAGCATGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: CLPPAAPACPGL*LLPLKKMQHAR Trigger: CCGTGCATGCTGCATTTTCTTCAGTGGTAATAATCACAGGCCAGGGCAGGCTGGAGCTGCGGGTGGCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | ACAGCTAACCTGGGGTTCTGCTTCACCCTCAACCTGTaGCCTGTCCAGTACAGACATGGGGTGCATGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TANLGFCFTLNL*PVQYRHGVHGQ Trigger: CTGCCCATGCACCCCATGTCTGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | CTCAGTGCCCTATCTCCATGGAAACCAGTCTGGCACTaGCATGGGGCCCTAGGGAGCCTGCATGAACATCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSALSPWKPVWH*HGALGSLHEHL Trigger: GAGATGTTCATGCAGGCTCCCTAGGGCCCCATGCCAGTGCCAGACTGGTTTCCATGGAGATAGGGCACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | CCAGCACTTGCTGCTAGGATTGGGGTTGGGGGCTGGTaGAAGGGACCTCCCATGGTGGAATCAATTCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: PALAARIGVGGW*KGPPMVESIPT Trigger: GGTTGGAATTGATTCCACCATGGGAGGTCCCTTCCACCAGCCCCCAACCCCAATCCTAGCAGCAAGTGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | TGGCCAGCAAGTCTGGCAATGACCAGACTGACATGGTaGCAAGAGCCAGTGAGTAGGGTGGGGGTGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: WPASLAMTRLTW*QEPVSRVGVRR Trigger: CCTTCTCACCCCCACCCTACTCACTGGCTCTTGTCACCATGTCAGTCTGGTCATTGCCAGACTTGCTGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | CGATGTTCAGGTGAAGGAATTCTCACCTGGGGCTCATaGAGAATGTGGCCTCTTGTGGAGGCGGCTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RCSGEGILTWGS*RMWPLVEAASQ Trigger: CTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | GTCTGGGCAGATGAAAGACAGGGCCGGGTTTTGGGATaGGACAGTGCCTGGAAGGAGACGCCTCTTTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: VWADERQGRVLG*DSAWKETPLFI Trigger: GATGAAAAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTCTTTCATCTGCCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | ATCCCAGCACTTGCTGCTAGGATTGGGGTTGGGGGCTaGTGGAAGGGACCTCCCATGGTGGAATCAATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IPALAARIGVGG*WKGPPMVESIP Trigger: TGGAATTGATTCCACCATGGGAGGTCCCTTCCACCAGCCCCCAACCCCAATCCTAGCAGCAAGTGCTGGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | TGGGCTCCCTGTCTAGCAGATGGCAGTCTCAGGAGCTaGAGAAGCTTGGCTTCCACAAACACTCCCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WAPCLADGSLRS*RSLASTNTPLP Trigger: AGGAAGGGGAGTGTTTGTGGAAGCCAAGCTTCTCCAGCTCCTGAGACTGCCATCTGCTAGACAGGGAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | GCAGCATGCACGGGAAAAGGTGGCCTGGGCTTGAAGTaGAGGTTCCAGGGGTATGCGGAATCATCTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AACTGKGGLGLK*RFQGYAESSPL Trigger: AAGAGGAGATGATTCCGCATACCCCTGGAACCTCCACTTCAAGCCCAGGCCACCTTTTCCCGTGCATGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | CAACTGGTGCCCTGTTCCTACAAGACACAGCTAACCTaGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLVPCSYKTQLT*GSASPSTCALS Trigger: GGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGTCTTGTAGGAACAGGGCACCAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | ACCACAGGGGGAGTGCTACAGGGTACCAGGCTCTGGTaGAAACAACTGGTGCCCTGTTCCTACAAGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: TTGGVLQGTRLW*KQLVPCSYKTQ Trigger: CTGTGTCTTGTAGGAACAGGGCACCAGTTGTTTCCACCAGAGCCTGGTACCCTGTAGCACTCCCCCTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | CACACCACAGGGGGAGTGCTACAGGGTACCAGGCTCTaGTGGAAACAACTGGTGCCCTGTTCCTACAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: HTTGGVLQGTRL*WKQLVPCSYKT Trigger: TGTCTTGTAGGAACAGGGCACCAGTTGTTTCCACCAGAGCCTGGTACCCTGTAGCACTCCCCCTGTGGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | AAAGGGCAGGTTTTTAGGCTGCTCTTCCCCTGGAGCTaGCCAGTGCTTACCAGAGGTGGAAACTCAAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KGQVFRLLFPWS*PVLTRGGNSRS Trigger: GCTCCTTGAGTTTCCACCTCTGGTAAGCACTGGGCAGCTCCAGGGGAAGAGCAGCCTAAAAACCTGCCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | GCCCTGTTCCTACAAGACACAGCTAACCTGGGGTTCTaGTTCACCCTCAACCTGTGCCCTGTCCAGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALFLQDTANLGF*FTLNLCPVQYR Trigger: TCTGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGTCTTGTAGGAACAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | TTCTCACCTGGGGCTCATGCAGAATGTGGCCTCTTGTaGAGGCGGCTAGCCAGAGTCAGCAGAAGATCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FSPGAHAECGLL*RRLARVSRRSF Trigger: AAAGGATCTTCTGCTGACTCTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGGTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | CCCTCCACAGAGAAGCCCCCATCTGCCATCACAAAGTaGACGCCCTTGCGATCTGTGTTGTCCAGGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSTEKPPSAITK*TPLRSVLSRTK Trigger: TTTTGTCCTGGACAACACAGATCGCAAGGGCGTCCACTTTGTGATGGCAGATGGGGGCTTCTCTGTGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
||
| 3UTR TCA 72 bp | TCAGGAGCCTGCCAAGTAAAGCCAGGCTGTGAAACATaGAGAATCGGCTGGAGGCAGCTCACCAACATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGACQVKPGCET*RIGWRQLTNMC Trigger: GCACATGTTGGTGAGCTGCCTCCAGCCGATTCTTCATGTTTCACAGCCTGGCTTTACTTGGCAGGCTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | GCTCCATTCAGGAGCCTGCCAAGTAAAGCCAGGCTGTaGAACATGAAGAATCGGCTGGAGGCAGCTCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: APFRSLPSKARL*NMKNRLEAAHQ Trigger: TTGGTGAGCTGCCTCCAGCCGATTCTTCATGTTTCACAGCCTGGCTTTACTTGGCAGGCTCCTGAATGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | CAGCTCCAGCCTGCCCTGGCCTGTGATTATTACCACTaGAGAAAATGCAGCATGCACGGGAAAAGGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QLQPALACDYYH*RKCSMHGKRWP Trigger: AGGCCACCTTTTCCCGTGCATGCTGCATTTTCTTCAGTGGTAATAATCACAGGCCAGGGCAGGCTGGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | GACCTCCCATGGTGGAATCAATTCCAACCTCACAGGTaGCTCAGTGCCCTATCTCCATGGAAACCAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DLPWWNQFQPHR*LSALSPWKPVW Trigger: CCAGACTGGTTTCCATGGAGATAGGGCACTGAGGCACCTGTGAGGTTGGAATTGATTCCACCATGGGAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | GAAGTCAAAGGGCAGGTTTTTAGGCTGCTCTTCCCCTaGAGCTGCCCAGTGCTTACCAGAGGTGGAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: EVKGQVFRLLFP*SCPVLTRGGNS Trigger: TGAGTTTCCACCTCTGGTAAGCACTGGGCAGCTCCAGGGGAAGAGCAGCCTAAAAACCTGCCCTTTGACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | CAACATGTGCGATGTTCAGGTGAAGGAATTCTCACCTaGGGCTCATGCAGAATGTGGCCTCTTGTGGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: QHVRCSGEGILT*GSCRMWPLVEA Trigger: CGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCACATGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGCTGGGGAAACATCACCTGTGCGGACAACAGACAGGGCCATGAGGAACTGAAATTCCGAAATGCATaGATGTTCTCTGGGCGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: WSWGNITCADNRQGHEELKFRNA*MFSGRV Trigger: CACCCGCCCAGAGAACATCAATGCATTTCGGAATTT...CAGTTCCTCATGGCCCTGTCTGTTGTCCGCACAGGTGATGTTTCCCCAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
||
| 3UTR TCA 72 bp | TTTCCTCCCAGAGAAAGAGCTAAAGCTGCTTCGACATaGGAACCGGAAGAACACGCTCCTCTCGGTGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FPPRERAKAAST*EPEEHAPLGGH Trigger: ATGGCCACCGAGAGGAGCGTGTTCTTCCGGTTCTCATGTCGAAGCAGCTTTAGCTCTTTCTCTGGGAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | GCTCTTCCCCTGGAGCTGCCCAGTGCTTACCAGAGGTaGAAACTCAAGGAGCAATTATACCCAGTACCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALPLELPSAYQR*KLKEQLYPVPK Trigger: TTTGGGTACTGGGTATAATTGCTCCTTGAGTTTCCACCTCTGGTAAGCACTGGGCAGCTCCAGGGGAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | GAAAGACAGGGCCGGGTTTTGGGATGCGACAGTGCCTaGAAGGAGACGCCTCTTTTCATCAGAATGTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: ERQGRVLGCDSA*KETPLFIRMSI Trigger: AATGGACATTCTGATGAAAAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | ATTCCAGAGGGAATGACTCTGACAAGTCCTAAGCGCTaGCCTGCCCTTGAGCAGCTGCTTTTCAGGTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: IPEGMTLTSPKR*PALEQLLFRLT Trigger: AGTCAACCTGAAAAGCAGCTGCTCAAGGGCAGGTCAGCGCTTAGGACTTGTCAGAGTCATTCCCTCTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | TGTCAGGAAAGCTCAGTGCCTCTGTCTATTTCAGATTaGCGGGCTAGAGGAAAAGCTGTCCCGGTGTCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CQESSVPLSISD*RARGKAVPVSE Trigger: TTCCGACACCGGGACAGCTTTTCCTCTAGCCCGTCAATCTGAAATAGACAGAGGCACTGAGCTTTCCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | TGGCCTGTGATTATTACCACTGAAGAAAATGCAGCATaGACGGGAAAAGGTGGCCTGGGCTTGAAGTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WPVIITTEENAA*TGKGGLGLKWR Trigger: CCTCCACTTCAAGCCCAGGCCACCTTTTCCCGTGCATGCTGCATTTTCTTCAGTGGTAATAATCACAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | AGAAGCCCCCATCTGCCATCACAAAGTGGACGCCCTTaGGATCTGTGTTGTCCAGGACAAAATTCCGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: RSPHLPSQSGRP*DLCCPGQNSEM Trigger: CATTTCGGAATTTTGTCCTGGACAACACAGATCGCAAGGGCGTCCACTTTGTGATGGCAGATGGGGGCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
||
| 3UTR CCA 72 bp | GAGCCTCACACATACCGTACTGTACTCACAGAGGAGTaGTTGAGCAAGTCAGGCCTGCCCTTATGTCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: EPHTYRTVLTEE*LSKSGLPLCLS Trigger: ACTTAGACATAAGGGCAGGCCTGACTTGCTCAACCACTCCTCTGTGAGTACAGTACGGTATGTGTGAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | GTCCAGGACAAAATTCCGAAATGCATTGATGTTCTCTaGGCGGGTGATATCTCCATCTCCATCGACCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: VQDKIPKCIDVL*AGDISISIDPT Trigger: GGTGGGGTCGATGGAGATGGAGATATCACCCGCCCAGAGAACATCAATGCATTTCGGAATTTTGTCCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
||
| 3UTR TCA 72 bp | GTGGCCTGGACTGCTAGAGTAACTTTCTGTTACTGCTaGGACAGGAAGTCAAAGGGCAGGTTTTTAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VAWTARVTFCYC*DRKSKGRFLGC Trigger: GCAGCCTAAAAACCTGCCCTTTGACTTCCTGTCTCAGCAGTAACAGAAAGTTACTCTAGCAGTCCAGGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | AGGTTTTTAGGCTGCTCTTCCCCTGGAGCTGCCCAGTaGTTACCAGAGGTGGAAACTCAAGGAGCAATTATA | + |
|
Preference number: 3 (lower is better) Translates to: RFLGCSSPGAAQ*LPEVETQGAII Trigger: TATAATTGCTCCTTGAGTTTCCACCTCTGGTAAGCACTGGGCAGCTCCAGGGGAAGAGCAGCCTAAAAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | TCAGGAAAAAGGCCCACATCTACAGACACTGGTTTCTaGATCTCATGTCCCACCCCACCAGAACAACCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGKRPTSTDTGF*ISCPTPPEQPR Trigger: TCTAGGTTGTTCTGGTGGGGTGGGACATGAGATGCAGAAACCAGTGTCTGTAGATGTGGGCCTTTTTCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | TCTGCTTTATACCGGAACTGTACTTTGATAAGCCTTTaGGCTCCCTGTCTAGCAGATGGCAGTCTCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SALYRNCTLISL*APCLADGSLRS Trigger: GCTCCTGAGACTGCCATCTGCTAGACAGGGAGCCCAAAGGCTTATCAAAGTACAGTTCCGGTATAAAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | CACTCCTTCCCGACCTGCCAGGACAAACTCCAGGATTaGGGTGAAGAAAAGACCACAAGAAACAACTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HSFPTCQDKLQD*GEEKTTRNNFD Trigger: ATCAAAGTTGTTTCTTGTGGTCTTTTCTTCACCCCAATCCTGGAGTTTGTCCTGGCAGGTCGGGAAGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | AAGACCACAAGAAACAACTTTGATTGGTATGACAGCTaGTCCTGGCCAGCATGTGATGGAGGGCCTTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: KTTRNNFDWYDS*SWPACDGGPSY Trigger: ATATGAAGGCCCTCCATCACATGCTGGCCAGGAGCAGCTGTCATACCAATCAAAGTTGTTTCTTGTGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | ACAAGAAACAACTTTGATTGGTATGACAGCTGCTCCTaGCCAGCATGTGATGGAGGGCCTTCATATTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TRNNFDWYDSCS*PACDGGPSYLG Trigger: ACCCAAATATGAAGGCCCTCCATCACATGCTGGCCAGGAGCAGCTGTCATACCAATCAAAGTTGTTTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CCA 72 bp | TGGGGTGAAGAAAAGACCACAAGAAACAACTTTGATTaGTATGACAGCTGCTCCTGGCCAGCATGTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: WGEEKTTRNNFD*YDSCSWPACDG Trigger: TCCATCACATGCTGGCCAGGAGCAGCTGTCATACCAATCAAAGTTGTTTCTTGTGGTCTTTTCTTCACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGCAAGGGAGGCACTCTTATTTCAAAGATGAAGGGATGTTCCAAAATTCTTCCCAACCCAAAGCTGTaGCCATTCCTCCCTCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: VSKGGTLISKMKGCSKILPNPKL*PFLPLT Trigger: TGTAAGAGGGAGGAATGGCAACAGCTTTGGGTTGGG...AAGAATTTTGGAACATCCCTTCATCTTTGAAATAAGAGTGCCTCCCTTGCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR GCA 72 bp | GTGAGTTGTGTGGTGAGCTCATTCACCCCCAAGTTCTaGTTTATACCGGAACTGTACTTTGATAAGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VSCVVSSFTPKF*FIPELYFDKPL Trigger: CAAAGGCTTATCAAAGTACAGTTCCGGTATAAAGCAGAACTTGGGGGTGAATGAGCTCACCACACAACTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR TCA 72 bp | TGCCATTCCTCCCTCTTACAGAGACAGGAAATGGAGTaGCTGACTATAGACAAATCAAAGCAGATCGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: CHSSLLQRQEME*LTIDKSKQIAM Trigger: CATAGCGATCTGCTTTGATTTGTCTATAGTCAGTCACTCCATTTCCTGTCTCTGTAAGAGGGAGGAATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCCTTCACCCAACGGTCTaGCTGGCGGCCATCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AEPSTLCPEARTVVCRELLHPTV*LAAIPS Trigger: ACTTGGGATGGCCGCCAGTCAGACCGTTGGGTGAAG...GAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCTCGCGTCCTGTGTAGCTaGGCTTTGGGGTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSPAPSALRLELWSAESSRVLCS*ALGCHQ Trigger: CTGGTGGCACCCCAAAGCTCAGCTACACAGGACGCG...AGAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR TCA 90 bp | TCGGAAGGACCTGGAGGCCGTGACCTCCCAGCTTTACAGGGCAGAGCTCAGTCCGCAGCAGCTGCTTGCTaGGGATCTCCTGCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEGPGGRDLPALQGRAQSAAAAC*GSPAGS Trigger: AGAACCTGCAGGAGATCCTCAGCAAGCAGCTGCTGC...GGACTGAGCTCTGCCCTGTAAAGCTGGGAGGTCACGGCCTCCAGGTCCTTCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | TCAGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCAGGGATTGGCTCTGGTaGGCGCTCGCCGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDVSHPTSTQPKAGCQFSRDWLW*ALAASP Trigger: AGGAGATGCGGCGAGCGCGCACCAGAGCCAATCCCT...GGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGCTCATGCAGAATGTGGCCTCTTGTGGAGGCGGCTAGCCAGAGTCAGCAGGGCCATGAGGAACTaGCACAGCAGCAGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGAHAECGLLWRRLARVSRAMRN*HSSSCL Trigger: CAAGCAGCTGCTGCTGTGCCAGTTCCTCATGGCCCT...GCTGACTCTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCGAAGCCTCCCGGGCCTaGACACACATCAGCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AEPSTLCPEARTVVCRELEASRA*THISKV Trigger: TACTTTGCTGATGTGTGTGCAGGCCCGGGAGGCTTC...GAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | AGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCTCTCCTGCAGGTTCTCCTaGCCCTCCACAGAGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RCVPSHLYSAQSRLPVLLSCRFS*PSTEKP Trigger: GGGCTTCTCTGTGGAGGGGCAGGAGAACCTGCAGGA...GAGGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR TCA 90 bp | TCAGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCGGATGTGGATTGCACTaGTCTTCCGCTGGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDVSHPTSTQPKAGCQFSGCGLH*SSAGPS Trigger: GGAAGGCCCAGCGGAAGATCAGTGCAATCCACATCC...GGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | AGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCTCGATGTGGAGCTGAGGTaGCGGGCAAGCTCCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RCVPSHLYSAQSRLPVLLDVELR*RASSPI Trigger: AATTGGGGAGCTTGCCCGGCACCTCAGCTCCACATC...GAGGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | TCGGAAGGACCTGGAGGCCGTGACCTCCCAGCTTTACAGGGCAGAGCTCAGTCCCATCCCAAAGCCCTTTaGGTGCCACTTCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEGPGGRDLPALQGRAQSHPKAL*VPLLPP Trigger: TGGAGGAAGAAGTGGCACGCAAAGGGCTTTGGGATG...GGACTGAGCTCTGCCCTGTAAAGCTGGGAGGTCACGGCCTCCAGGTCCTTCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGCATAGGGATTGGCTCTaGTGCGCGCTCGCCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSHRDWL*CALAAS Trigger: AGATGCGGCGAGCGCGCACCAGAGCCAATCCCTATG...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCTCGACTCCTTCAGCAGTaGCTTCCCAGAAGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSPAPSALRLELWSAESSRLLQQ*LPRRVQ Trigger: CTGGACTCTTCTGGGAAGCCACTGCTGAAGGAGTCG...AGAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | GACAGGGCCGGGTTTTGGGATGCGACAGTGCCTGGAAGGAGACGCCTCTTTTCAGGATCCTGGGGCTTCTaGGAGTCACGCATGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DRAGFWDATVPGRRRLFSGSWGF*ESRMWK Trigger: CTTCCACATGCGTGACTCCCAGAAGCCCCAGGATCC...TGAAAAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCGTCGACCTTTCTGATTaGAGGTCTCCACGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AEPSTLCPEARTVVCRELVDLSD*RSPRCP Trigger: AGGACATCGTGGAGACCTCCAATCAGAAAGGTCGAC...GAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGTGCCCATGGCCAGCAAGTCTGGCAATGACCAGACTGACATGGTGACAGGAGCAACTCGAGCCTaGTCTGGGATCTTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVPMASKSGNDQTDMVTGATRA*SGIFHS Trigger: GCTGTGGAAGATCCCAGACCAGGCTCGAGTTGCTCC...TGTCACCATGTCAGTCTGGTCATTGCCAGACTTGCTGGCCATGGGCACCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | TCGGAAGGACCTGGAGGCCGTGACCTCCCAGCTTTACAGGGCAGAGCTCAGTCCAAAGGACGTCCTCCTTaGACAGCTTGTCTGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEGPGGRDLPALQGRAQSKGRPP*TACLDP Trigger: AGGATCCAGACAAGCTGTCCAAGGAGGACGTCCTTT...GGACTGAGCTCTGCCCTGTAAAGCTGGGAGGTCACGGCCTCCAGGTCCTTCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CAA 72 bp | ATGAGGGTCTGGGCAGATGAAAGACAGGGCCGGGTTTaGGGATGCGACAGTGCCTGGAAGGAGACGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MRVWADERQGRV*GCDSAWKETPL Trigger: AAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTCTTTCATCTGCCCAGACCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAGTACACATTGCTGAGGATCTCCTaGAGGTTCTCCTGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVLRTWDWLCSAFSLEYTLLRIS*RFSCPS Trigger: GGAGGGGCAGGAGAACCTGCAGGAGATCCTCAGCAA...TGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGCTGTCCTGAAGGATGAGCACGGTAGAGCCTCACACATACCGTACTGTCCACCTTCAGCCCTTTaGACACCACATACCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPAVLKDEHGRASHIPYCPPSAL*TPHTAL Trigger: CAGAGCGGTATGTGGTGTGCAAAGGGCTGAAGGTGG...ACAGTACGGTATGTGTGAGGCTCTACCGTGCTCATCCTTCAGGACAGCTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCTATCAAGGATGTGGATTaGACTGATCTTCCGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPAPSALRLELWSAESSIKDVD*TDLPLG Trigger: GCCCAGCGGAAGATCAGTGCAATCCACATCCTTGAT...AGAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | GGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAGTACACATGGGAGTCACGCATGTaGAAGCCATCTCCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVLRTWDWLCSAFSLEYTWESRM*KPSPHS Trigger: GGAGTGGGGAGATGGCTTCCACATGCGTGACTCCCA...TGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CAA 72 bp | AATATGGCATCCCAGCACTTGCTGCTAGGATTGGGGTaGGGGGCTGGTGGAAGGGACCTCCCATGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NMASQHLLLGLG*GAGGRDLPWWN Trigger: ATTCCACCATGGGAGGTCCCTTCCACCAGCCCCCAACCCCAATCCTAGCAGCAAGTGCTGGGATGCCATATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CAA 72 bp | GAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCTaGTGGAGGCGGCTAGCCAGAGTCAGCAGAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: EFSPGAHAECGL*WRRLARVSRRS Trigger: GGATCTTCTGCTGACTCTGGCTAGCCGCCTCCACAAGAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | TCAGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCATGTCCTTCCGACCCTaGCTGTATTTACCCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDVSHPTSTQPKAGCQFSMSFRP*LYLPNP Trigger: GGGATTGGGTAAATACAGCCAGGGTCGGAAGGACAT...GGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| 3UTR CAA 72 bp | CTGGACTGCCACAGTGCTGCCATGCCATGCAGTGAGTaGTGTGGTGAGCTCATTCACCCCCAAGTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDCHSAAMPCSE*CGELIHPQVLL Trigger: AAGCAGAACTTGGGGGTGAATGAGCTCACCACACAACTCACTGCATGGCATGGCAGCACTGTGGCAGTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR TCA 90 bp | AGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCTCCTTGAATTTTGGGTCTaGAGAGGAAGGAGCAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCVPSHLYSAQSRLPVLLLEFWV*RGRSNS Trigger: CGAGTTGCTCCTTCCTCTTCAGACCCAAAATTCAAG...GAGGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTCAGACAGCAGAGTTTCACAGCTGTGTCCTAAGGCCCCGAAAGAGCTCCCAGAGTTTTGGCAGTaGGCAGTGTGGGCTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFSDSRVSQLCPKAPKELPEFWQ*AVWACS Trigger: GCTACAAGCCCACACTGCTCACTGCCAAAACTCTGG...GAGCTCTTTCGGGGCCTTAGGACACAGCTGTGAAACTCTGCTGTCTGAGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR TCA 90 bp | TCGGAAGGACCTGGAGGCCGTGACCTCCCAGCTTTACAGGGCAGAGCTCAGTCCGCTTCATCTCTAGCCTaGCAAAAATCTTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SEGPGGRDLPALQGRAQSASSLA*QKSSPS Trigger: AGATGGAGAAGATTTTTGTCAGGCTAGAGATGAAGC...GGACTGAGCTCTGCCCTGTAAAGCTGGGAGGTCACGGCCTCCAGGTCCTTCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | TGCGATGTTCAGGTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCGGAAACCACGACACTTaGTCACAGGCATTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CDVQVKEFSPGAHAECGLGNHDT*SQALGS Trigger: GGAGCCCAATGCCTGTGAGCAAGTGTCGTGGTTTCC...GAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR GCA 90 bp | ACAGAGAAGCCCCCATCTGCCATCACAAAGTGGACGCCCTTGCGATCTGTGTTGCATCCCAAAGCCCTTTaGGTGCCACTTCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEKPPSAITKWTPLRSVLHPKAL*VPLLPP Trigger: TGGAGGAAGAAGTGGCACGCAAAGGGCTTTGGGATG...CAACACAGATCGCAAGGGCGTCCACTTTGTGATGGCAGATGGGGGCTTCTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
||
| CDS-3UTR GCA 90 bp | GCCCTTGAGCAGCTGCTTTTCAGGTTGACTCCAGTTCTCAGACAGCAGAGTTTCTTGCGGATCTCTGCCTaGCTAGGCTCACTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALEQLLFRLTPVLRQQSFLRISA*LGSLRV Trigger: GACCCTGAGTGAGCCTAGGCAGGCAGAGATCCGCAA...GAAACTCTGCTGTCTGAGAACTGGAGTCAACCTGAAAAGCAGCTGCTCAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAAGCTTGGCTTCCACAAACACTCCCCTTCCTCAGTTACACAGCACTGTGCTCGAAGAGCTCGCTaGAGGCCGAGTAGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKLGFHKHSPSSVTQHCARRAR*RPSRSP Trigger: AGGACTTCTACTCGGCCTCCAGCGAGCTCTTCGAGC...ACAGTGCTGTGTAACTGAGGAAGGGGAGTGTTTGTGGAAGCCAAGCTTCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | ACACAGCTAACCTGGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCCAGTACATCTGCCATCACAAAGTaGACGCCCTTGCGATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLTWGSASPSTCALSSTSAITK*TPLRSV Trigger: CACAGATCGCAAGGGCGTCCACTTTGTGATGGCAGA...TGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | GGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAGTACACATCCTGCACAAAGGCGTaGATCTTGGCCAGAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVLRTWDWLCSAFSLEYTSCTKA*ILARAL Trigger: CAAAGCTCTGGCCAAGATCCACGCCTTTGTGCAGGA...TGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | GGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAGTACACAGGGATCTTCCACAGCTaGAGGCATTCTTTGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GVLRTWDWLCSAFSLEYTGIFHS*RHSLRI Trigger: GATCCGCAAAGAATGCCTCCAGCTGTGGAAGATCCC...TGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CCA 90 bp | AGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCTCAGGACATCAAGGATGTaGATTGCACTGATCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RCVPSHLYSAQSRLPVLLRTSRM*IALIFR Trigger: GCGGAAGATCAGTGCAATCCACATCCTTGATGTCCT...GAGGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CCA 90 bp | CAGTTCTCAGACAGCAGAGTTTCACAGCTGTGTCCTAAGGCCCCGAAAGAGCTCCTTGGACAGCTTGTCTaGATCCTGGGGCTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFSDSRVSQLCPKAPKELLGQLV*ILGLLG Trigger: TCCCAGAAGCCCCAGGATCCAGACAAGCTGTCCAAG...GAGCTCTTTCGGGGCCTTAGGACACAGCTGTGAAACTCTGCTGTCTGAGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR TCA 90 bp | GCTCATTCACCCCCAAGTTCTGCTTTATACCGGAACTGTACTTTGATAAGCCTTCGTCAGATGTGGAGCTaGGGTGCCGGGCAAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHSPPSSALYRNCTLISLRQMWS*GAGQAP Trigger: GGGAGCTTGCCCGGCACCTCAGCTCCACATCTGACG...AAGGCTTATCAAAGTACAGTTCCGGTATAAAGCAGAACTTGGGGGTGAATGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR TCA 90 bp | CAGTTCTCAGACAGCAGAGTTTCACAGCTGTGTCCTAAGGCCCCGAAAGAGCTCGGGCCTAGAGGATTGTaGCTCTGGATGAAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFSDSRVSQLCPKAPKELGPRGL*LWMKER Trigger: CCTTTCCTTCATCCAGAGTCACAATCCTCTAGGCCC...GAGCTCTTTCGGGGCCTTAGGACACAGCTGTGAAACTCTGCTGTCTGAGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR GCA 90 bp | CTGGAGAAGCTTGGCTTCCACAAACACTCCCCTTCCTCAGTTACACAGCACTGTCCAAAGCCCTTTGCGTaGCACTTCTTCCTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEKLGFHKHSPSSVTQHCPKPFA*HFFLHS Trigger: GCTGTGGAGGAAGAAGTGGCACGCAAAGGGCTTTGG...ACAGTGCTGTGTAACTGAGGAAGGGGAGTGTTTGTGGAAGCCAAGCTTCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR GCA 90 bp | ACCCCTGTACTTATCAGCTATAAGCAGGGTCTCAGTGGGTCCTTGGAGAGGATGCCAAAGCCCTTTGCGTaGCACTTCTTCCTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPVLISYKQGLSGSLERMPKPFA*HFFLHS Trigger: GCTGTGGAGGAAGAAGTGGCACGCAAAGGGCTTTGG...CATCCTCTCCAAGGACCCACTGAGACCCTGCTTATAGCTGATAAGTACAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| CDS-3UTR GCA 90 bp | AAGGTAGAACCTGTACCCAATGGAGCAGCTGAATTCAGGAGCAGTGTGAGCCCGCAAAGTGGACGCCCTTaGGATCTGTGTTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVEPVPNGAAEFRSSVSPQSGRP*DLCCPG Trigger: TCCTGGACAACACAGATCGCAAGGGCGTCCACTTTG...CGGGCTCACACTGCTCCTGAATTCAGCTGCTCCATTGGGTACAGGTTCTACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR GCA 90 bp | GTCCTGAGGACAGGTAATGACCCTCTAAGCCAAGGCAGAATGGTCCCTAACTTTCAAAGTGGCCTCCTGTaGGGACAACAGACAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLRTGNDPLSQGRMVPNFQSGLL*GQQTGP Trigger: TGGCCCTGTCTGTTGTCCGCACAGGAGGCCACTTTG...AAAGTTAGGGACCATTCTGCCTTGGCTTAGAGGGTCATTACCTGTCCTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR GCA 90 bp | TGCGATGTTCAGGTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCCCCGAACATCATCTATaGCCACCTTCAGCCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CDVQVKEFSPGAHAECGLPEHHL*PPSALC Trigger: GCAAAGGGCTGAAGGTGGGCATAGATGATGTTCGGG...GAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR GCA 90 bp | CTGCAGGTGCCCATGGCCAGCAAGTCTGGCAATGACCAGACTGACATGGTGACATCCCCTTTCAGTTCATaGACAATCTCCACACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVPMASKSGNDQTDMVTSPFSS*TISTQS Trigger: GCTCTGTGTGGAGATTGTGCATGAACTGAAAGGGGA...TGTCACCATGTCAGTCTGGTCATTGCCAGACTTGCTGGCCATGGGCACCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CCA 90 bp | TGCGATGTTCAGGTGAAGGAATTCTCACCTGGGGCTCATGCAGAATGTGGCCTCGGGGGCAGTGCATTCTaGGTCAGTTCTCCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CDVQVKEFSPGAHAECGLGGSAF*VSSPLH Trigger: ATGAAGAGGAGAACTGACCCAGAATGCACTGCCCCC...GAGGCCACATTCTGCATGAGCCCCAGGTGAGAATTCCTTCACCTGAACATCGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 72 bp | TGCTCCTGGCCAGCATGTGATGGAGGGCCTTCATATTaGGGTGGCCTAGTAGAAATGGGGCAAAACAATGGC | + |
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Preference number: 4 (lower is better) Translates to: CSWPACDGGPSY*GGLVEMGQNNG Trigger: GCCATTGTTTTGCCCCATTTCTACTAGGCCACCCAAATATGAAGGCCCTCCATCACATGCTGGCCAGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 72 bp | TGTCTAGCAGATGGCAGTCTCAGGAGCTGGAGAAGCTaGGCTTCCACAAACACTCCCCTTCCTCAGTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: CLADGSLRSWRS*ASTNTPLPQLH Trigger: GTGTAACTGAGGAAGGGGAGTGTTTGTGGAAGCCAAGCTTCTCCAGCTCCTGAGACTGCCATCTGCTAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR TCA 90 bp | TCCATCTTTTTCCTCCCAGAGAAAGAGCTAAAGCTGCTTCGACATGAGAACCGGCACTTGAGCATGCTGTaGAGCAGCTCTTCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SIFFLPEKELKLLRHENRHLSML*SSSSPQ Trigger: CTGTGGGGAAGAGCTGCTTCACAGCATGCTCAAGTG...CCGGTTCTCATGTCGAAGCAGCTTTAGCTCTTTCTCTGGGAGGAAAAAGATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR TCA 90 bp | GGTGGCCATCTTCACTGTCTTCGCCCTGCTCTATGCTTACTGGACTATGTGAGTGATTGTGACTCTGGATaGAGGAAAGGACGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGHLHCLRPALCLLDYVSDCDSG*RKGRPP Trigger: AGGAGGACGTCCTTTCCTTCATCCAGAGTCACAATC...ACTCACATAGTCCAGTAAGCATAGAGCAGGGCGAAGACAGTGAAGATGGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR GCA 90 bp | CCTCCTAGTGGAGAGGAAGGAGCAGCTAGAGCCACTGCTAGCTCAGAACTCTGCGACAAAATTCCGAAATaGATTGATGTTCTCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSGEEGAARATASSELCDKIPK*IDVLWA Trigger: CGCCCAGAGAACATCAATGCATTTCGGAATTTTGTC...GCAGAGTTCTGAGCTAGCAGTGGCTCTAGCTGCTCCTTCCTCTCCACTAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CCA 90 bp | GGCCCAGCTGTCCTGAAGGATGAGCACGGTAGAGCCTCACACATACCGTACTGTTTGGCCATAAGCCTCTaGGAAACACTGTTATACATG | + |
|
Preference number: 4 (lower is better) Translates to: GPAVLKDEHGRASHIPYCLAISL*ETLLYM Trigger: CATGTATAACAGTGTTTCCCAGAGGCTTATGGCCAA...ACAGTACGGTATGTGTGAGGCTCTACCGTGCTCATCCTTCAGGACAGCTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CCA 90 bp | GGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAGTACACATTCAGTGGTACATTCTaGAAACCACGACACTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVLRTWDWLCSAFSLEYTFSGTF*KPRHLL Trigger: GAGCAAGTGTCGTGGTTTCCAGAATGTACCACTGAA...TGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CCA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGAGTCAGGAATTTCAGTaGTACATTCTGGAAACCACG | + |
|
Preference number: 4 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSSQEFQ*YILETT Trigger: CGTGGTTTCCAGAATGTACCACTGAAATTCCTGACT...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 72 bp | GAGAAGCCCCCATCTGCCATCACAAAGTGGACGCCCTaGCGATCTGTGTTGTCCAGGACAAAATTCCGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EKPPSAITKWTP*RSVLSRTKFRN Trigger: ATTTCGGAATTTTGTCCTGGACAACACAGATCGCAAGGGCGTCCACTTTGTGATGGCAGATGGGGGCTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| CDS-3UTR TCA 90 bp | GGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAGTACACAATTCATGGTCTCCTTTaGTCACCATCAAGGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: GVLRTWDWLCSAFSLEYTIHGLL*SPSREL Trigger: TAGTTCCCTTGATGGTGATCAAAGGAGACCATGAAT...TGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 72 bp | CCTCACACATACCGTACTGTACTCACAGAGGAGTGGTaGAGCAAGTCAGGCCTGCCCTTATGTCTAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PHTYRTVLTEEW*SKSGLPLCLSL Trigger: TAGACTTAGACATAAGGGCAGGCCTGACTTGCTCAACCACTCCTCTGTGAGTACAGTACGGTATGTGTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CCA 90 bp | CTTTTGTCCAAAGGAGGAAGCAGTGAAACAGTAACAAGGGGTCTGTATTCTTTGTCATCTCATAGGGATTaGCTCTGGTGCGCGCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSKGGSSETVTRGLYSLSSHRD*LWCALA Trigger: GGCGAGCGCGCACCAGAGCCAATCCCTATGAGATGA...CAAAGAATACAGACCCCTTGTTACTGTTTCACTGCTTCCTCCTTTGGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR GCA 90 bp | TCCATCTTTTTCCTCCCAGAGAAAGAGCTAAAGCTGCTTCGACATGAGAACCGGAGCAGATGCTTTTGCTaGATGATTGACAGAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIFFLPEKELKLLRHENRSRCFC*MIDRGE Trigger: CTCTCCTCTGTCAATCATGCAGCAAAAGCATCTGCT...CCGGTTCTCATGTCGAAGCAGCTTTAGCTCTTTCTCTGGGAGGAAAAAGATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CCA 90 bp | GTGAGCAAGGGAGGCACTCTTATTTCAAAGATGAAGGGATGTTCCAAAATTCTTTGTGTAGCTGAGCTTTaGGGTGCCACCAGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKGGTLISKMKGCSKILCVAEL*GATRAL Trigger: AAGGGCTCTGGTGGCACCCCAAAGCTCAGCTACACA...AAGAATTTTGGAACATCCCTTCATCTTTGAAATAAGAGTGCCTCCCTTGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| 3UTR CAA 72 bp | TCTGCCATCACAAAGTGGACGCCCTTGCGATCTGTGTaGTCCAGGACAAAATTCCGAAATGCATTGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: SAITKWTPLRSV*SRTKFRNALMF Trigger: GAACATCAATGCATTTCGGAATTTTGTCCTGGACAACACAGATCGCAAGGGCGTCCACTTTGTGATGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| CDS-3UTR CCA 90 bp | CTTTTGTCCAAAGGAGGAAGCAGTGAAACAGTAACAAGGGGTCTGTATTCTTTGTGCATTGATGTTCTCTaGGCGGGTGATATCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLSKGGSSETVTRGLYSLCIDVL*AGDISI Trigger: GATGGAGATATCACCCGCCCAGAGAACATCAATGCA...CAAAGAATACAGACCCCTTGTTACTGTTTCACTGCTTCCTCCTTTGGACAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CCA 90 bp | CTTTTGTCCAAAGGAGGAAGCAGTGAAACAGTAACAAGGGGTCTGTATTCTTTGAAACACTGTTATACATaGAATATCGGGACGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSKGGSSETVTRGLYSLKHCYT*NIGTMF Trigger: GAACATCGTCCCGATATTCCATGTATAACAGTGTTT...CAAAGAATACAGACCCCTTGTTACTGTTTCACTGCTTCCTCCTTTGGACAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS TCA 90 bp | CAGGCATTGGGCTCCGGCTCATCTCGCCAGTCCACATTCAGCTCCTaGTCGAAGCCCTGCAGCGTCAGACCCAAACCACGTCGACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QALGSGSSRQSTFSS*SKPCSVRPKPRRPF Trigger: GAAAGGTCGACGTGGTTTGGGTCTGACGCTGCAGGGCTTCGATCAGGAGCTGAATGTGGACTGGCGAGATGAGCCGGAGCCCAATGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS GCA 90 bp | TTGAAGTCGTTGGGGCCCTTGAGCGTCATCCCAAAGCCCTTTGCGTaGCACTTCTTCCTCCACAGCACGTACTCGGAGAAGCCTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKSLGPLSVIPKPFA*HFFLHSTYSEKPPG Trigger: CCCGGGAGGCTTCTCCGAGTACGTGCTGTGGAGGAAGAAGTGGCACGCAAAGGGCTTTGGGATGACGCTCAAGGGCCCCAACGACTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130052.9 ENSMUST00000234388.2 ENSMUST00000234911.2 ENSMUST00000235031.2 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCCAGCACCCTCTGCCCTGAGGCTAGAACTGTGGTCTGCAGAGAGCTCACAAAGTGGACGCCCTaGCGATCTGTGTTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AEPSTLCPEARTVVCRELTKWTP*RSVLSR Trigger: CCTGGACAACACAGATCGCAAGGGCGTCCACTTTGT...GAGCTCTCTGCAGACCACAGTTCTAGCCTCAGGGCAGAGGGTGCTGGGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS GCA 90 bp | CAGCTTGAAGTCGTTGGGGCCCTTGAGCGTCATCCCAAAGCCCTTTaGGTGCCACTTCTTCCTCCACAGCACGTACTCGGAGAAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QLEVVGALERHPKAL*VPLLPPQHVLGEAS Trigger: GGAGGCTTCTCCGAGTACGTGCTGTGGAGGAAGAAGTGGCACGCAAAGGGCTTTGGGATGACGCTCAAGGGCCCCAACGACTTCAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130052.9 ENSMUST00000234388.2 ENSMUST00000234911.2 ENSMUST00000235031.2 |
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| CDS GCA 90 bp | CTGGTCTGGGATCTTCCACAGCTGGAGGCATTCTTTGCGGATCTCTaGCTGCCTAGGCTCACTCAGGGTCGTGTCCTGCACAAAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVWDLPQLEAFFADL*LPRLTQGRVLHKGV Trigger: CACGCCTTTGTGCAGGACACGACCCTGAGTGAGCCTAGGCAGGCAGAGATCCGCAAAGAATGCCTCCAGCTGTGGAAGATCCCAGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CCA 90 bp | CTGCCCTGTTTAGGAAGAAGACGCCTCGGATCATCTCATAGGGATTaGCTCTGGTGCGCGCTCGCCGCATCTCCTCCCCATCCAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LPCLGRRRLGSSHRD*LWCALAASPPHPGC Trigger: ACATCCTGGATGGGGAGGAGATGCGGCGAGCGCGCACCAGAGCCAATCCCTATGAGATGATCCGAGGCGTCTTCTTCCTAAACAGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000129864.2 ENSMUST00000234388.2 ENSMUST00000234911.2 |
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| CDS CCA 90 bp | ACAAAGTGGCCTCCTGTGCGGACAACAGACAGGGCCATGAGGAACTaGCACAGCAGCAGCTGCTTGCTGAGGATCTCCTGCAGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TKWPPVRTTDRAMRN*HSSSCLLRISCRFS Trigger: GGAGAACCTGCAGGAGATCCTCAGCAAGCAGCTGCTGCTGTGCCAGTTCCTCATGGCCCTGTCTGTTGTCCGCACAGGAGGCCACTTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000130052.9 ENSMUST00000234911.2 ENSMUST00000235031.2 |
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| CDS CCA 90 bp | GAAAGGACGTCCTCCTTGGACAGCTTGTCTGGATCCTGGGGCTTCTaGGAGTCACGCATGTGGAAGCCATCTCCCCACTCCCAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ERTSSLDSLSGSWGF*ESRMWKPSPHSQKS Trigger: GCTCTTCTGGGAGTGGGGAGATGGCTTCCACATGCGTGACTCCCAGAAGCCCCAGGATCCAGACAAGCTGTCCAAGGAGGACGTCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTAGTGGAGAGGAAGGAGCAGCTAGAGCCACTGCTAGCTCAGAACTCTGCCACAGCAGCAGCTGCTaGCTGAGGATCTCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSGEEGAARATASSELCHSSSC*LRISCR Trigger: CCTGCAGGAGATCCTCAGCAAGCAGCTGCTGCTGTG...GCAGAGTTCTGAGCTAGCAGTGGCTCTAGCTGCTCCTTCCTCTCCACTAGGAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | GACAGGGCCGGGTTTTGGGATGCGACAGTGCCTGGAAGGAGACGCCTCTTTTCATCCTCCTTGGACAGCTaGTCTGGATCCTGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DRAGFWDATVPGRRRLFSSSLDS*SGSWGF Trigger: GAAGCCCCAGGATCCAGACAAGCTGTCCAAGGAGGA...TGAAAAGAGGCGTCTCCTTCCAGGCACTGTCGCATCCCAAAACCCGGCCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS GCA 90 bp | TCTGGGATCTTCCACAGCTGGAGGCATTCTTTGCGGATCTCTGCCTaGCTAGGCTCACTCAGGGTCGTGTCCTGCACAAAGGCGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SGIFHSWRHSLRISA*LGSLRVVSCTKAWI Trigger: GATCCACGCCTTTGTGCAGGACACGACCCTGAGTGAGCCTAGGCAGGCAGAGATCCGCAAAGAATGCCTCCAGCTGTGGAAGATCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTAGTGGAGAGGAAGGAGCAGCTAGAGCCACTGCTAGCTCAGAACTCTGCTCCAGCTTGAAGTCGTaGGGGCCCTTGAGCGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PPSGEEGAARATASSELCSSLKS*GPLSVI Trigger: GATGACGCTCAAGGGCCCCAACGACTTCAAGCTGGA...GCAGAGTTCTGAGCTAGCAGTGGCTCTAGCTGCTCCTTCCTCTCCACTAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS GCA 90 bp | TTAGGAAGAAGACGCCTCGGATCATCTCATAGGGATTGGCTCTGGTaGGCGCTCGCCGCATCTCCTCCCCATCCAGGATGTCAAACACAC | + |
|
Preference number: 5 (lower is better) Translates to: LGRRRLGSSHRDWLW*ALAASPPHPGCQTH Trigger: GTGTGTTTGACATCCTGGATGGGGAGGAGATGCGGCGAGCGCGCACCAGAGCCAATCCCTATGAGATGATCCGAGGCGTCTTCTTCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000129864.2 ENSMUST00000234388.2 ENSMUST00000234911.2 |
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| CDS CCA 90 bp | CGAAGCCCTGCAGCGTCAGACCCAAACCACGTCGACCTTTCTGATTaGAGGTCTCCACGATGTCCTTCCGACCCTGGCTGTATTTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPAASDPNHVDLSD*RSPRCPSDPGCIYP Trigger: TGGGTAAATACAGCCAGGGTCGGAAGGACATCGTGGAGACCTCCAATCAGAAAGGTCGACGTGGTTTGGGTCTGACGCTGCAGGGCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS CCA 90 bp | TGCTCACGGACGTCACTGCCATTCAGCACCAGGACATCAAGGATGTaGATTGCACTGATCTTCCGCTGGGCCTTCCCCTCCCCTTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CSRTSLPFSTRTSRM*IALIFRWAFPSPFS Trigger: ACTGAAAGGGGAGGGGAAGGCCCAGCGGAAGATCAGTGCAATCCACATCCTTGATGTCCTGGTGCTGAATGGCAGTGACGTCCGTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CCA 90 bp | GTGACTCTGGATGAAGGAAAGGACGTCCTCCTTGGACAGCTTGTCTaGATCCTGGGGCTTCTGGGAGTCACGCATGTGGAAGCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTLDEGKDVLLGQLV*ILGLLGVTHVEAIS Trigger: GGAGATGGCTTCCACATGCGTGACTCCCAGAAGCCCCAGGATCCAGACAAGCTGTCCAAGGAGGACGTCCTTTCCTTCATCCAGAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | CTGCAGGTGCCCATGGCCAGCAAGTCTGGCAATGACCAGACTGACATGGTGACATGGAAACCACGACACTaGCTCACAGGCATTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQVPMASKSGNDQTDMVTWKPRH*LTGIGL Trigger: GAGCCCAATGCCTGTGAGCAAGTGTCGTGGTTTCCA...TGTCACCATGTCAGTCTGGTCATTGCCAGACTTGCTGGCCATGGGCACCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | GGCCCAGCTGTCCTGAAGGATGAGCACGGTAGAGCCTCACACATACCGTACTGTTCATCCCAAAGCCCTTaGCGTGCCACTTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPAVLKDEHGRASHIPYCSSQSP*RATSSS Trigger: GGAGGAAGAAGTGGCACGCAAAGGGCTTTGGGATGA...ACAGTACGGTATGTGTGAGGCTCTACCGTGCTCATCCTTCAGGACAGCTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | TGGGGAAACATCACCTGTGCGGACAACAGACAGGGCCATGAGGAACTGGCACAGTCATCCCAAAGCCCTTaGCGTGCCACTTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WGNITCADNRQGHEELAQSSQSP*RATSSS Trigger: GGAGGAAGAAGTGGCACGCAAAGGGCTTTGGGATGA...CTGTGCCAGTTCCTCATGGCCCTGTCTGTTGTCCGCACAGGTGATGTTTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172516.9 |
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| CDS-3UTR CAA 90 bp | TCAGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCCTGCTGGTGATAGGCTaGAAGAGACACACGCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDVSHPTSTQPKAGCQFSLLVIG*KRHTRS Trigger: TGAACGCGTGTGTCTCTTCAAGCCTATCACCAGCAG...GGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | GGCCCAGCTGTCCTGAAGGATGAGCACGGTAGAGCCTCACACATACCGTACTGTGAAAGGACGTCCTCCTaGGACAGCTTGTCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GPAVLKDEHGRASHIPYCERTSS*DSLSGS Trigger: GGATCCAGACAAGCTGTCCAAGGAGGACGTCCTTTC...ACAGTACGGTATGTGTGAGGCTCTACCGTGCTCATCCTTCAGGACAGCTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS CCA 90 bp | TGTTTAGGAAGAAGACGCCTCGGATCATCTCATAGGGATTGGCTCTaGTGCGCGCTCGCCGCATCTCCTCCCCATCCAGGATGTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: CLGRRRLGSSHRDWL*CALAASPPHPGCQT Trigger: TGTTTGACATCCTGGATGGGGAGGAGATGCGGCGAGCGCGCACCAGAGCCAATCCCTATGAGATGATCCGAGGCGTCTTCTTCCTAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000129864.2 ENSMUST00000234388.2 ENSMUST00000234911.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTTGAGCAGCTGCTTTTCAGGTTGACTCCAGTTCTCAGACAGCAGAGTTTCAAGTCGTTGGGGCCCTaGAGCGTCATCCCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALEQLLFRLTPVLRQQSFKSLGP*SVIPKP Trigger: GGGCTTTGGGATGACGCTCAAGGGCCCCAACGACTT...GAAACTCTGCTGTCTGAGAACTGGAGTCAACCTGAAAAGCAGCTGCTCAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | CGCCACGAGGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAAATTCCGAAATGCATaGATGTTCTCTGGGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RHEECSGPGTGSAVLFPLKFRNA*MFSGRV Trigger: CACCCGCCCAGAGAACATCAATGCATTTCGGAATTT...CAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCCTCGTGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CAA 90 bp | AGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCTCGCTTTGAAGGCATCTTaGAAATCATCAGAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RCVPSHLYSAQSRLPVLLALKAS*KSSEQG Trigger: GCCCTGCTCTGATGATTTCAAAGATGCCTTCAAAGC...GAGGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS GCA 90 bp | ACTTCCCCAAGCCCAGGAGGAATTTCTGCTCGCTGCCAGACACCATaGAACGATACTCCAACACAGGACGGATCTTCTCCAGAGTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSPGGISARCQTP*NDTPTQDGSSPEFW Trigger: CCAAAACTCTGGAGAAGATCCGTCCTGTGTTGGAGTATCGTTGCATGGTGTCTGGCAGCGAGCAGAAATTCCTCCTGGGCTTGGGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS GCA 90 bp | TGTAGATCTGGGACTTCCCCAAGCCCAGGAGGAATTTCTGCTCGCTaGCAGACACCATGCAACGATACTCCAACACAGGACGGATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRSGTSPSPGGISAR*QTPCNDTPTQDGSS Trigger: AGAAGATCCGTCCTGTGTTGGAGTATCGTTGCATGGTGTCTGGCAGCGAGCAGAAATTCCTCCTGGGCTTGGGGAAGTCCCAGATCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS-3UTR CAA 90 bp | ACACAGCTAACCTGGGGTTCTGCTTCACCCTCAACCTGTGCCCTGTCCAGTACAACAAAGGCGTGGATCTaGGCCAGAGCTTTGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQLTWGSASPSTCALSSTTKAWI*ARALIC Trigger: ACAGATCAAAGCTCTGGCCAAGATCCACGCCTTTGT...TGTACTGGACAGGGCACAGGTTGAGGGTGAAGCAGAACCCCAGGTTAGCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CAA 90 bp | CTGGAGAAGCTTGGCTTCCACAAACACTCCCCTTCCTCAGTTACACAGCACTGTGTGCCACCAGAGCCCTaGATGAGCTTCATCTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEKLGFHKHSPSSVTQHCVPPEP*MSFISS Trigger: GCTAGAGATGAAGCTCATCAAGGGCTCTGGTGGCAC...ACAGTGCTGTGTAACTGAGGAAGGGGAGTGTTTGTGGAAGCCAAGCTTCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS CCA 90 bp | CCAGTCACTCATTTCCCGAGAGTCAGGAATTTCAGTGGTACATTCTaGAAACCACGACACTTGCTCACAGGCATTGGGCTCCGGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PVTHFPRVRNFSGTF*KPRHLLTGIGLRLI Trigger: GATGAGCCGGAGCCCAATGCCTGTGAGCAAGTGTCGTGGTTTCCAGAATGTACCACTGAAATTCCTGACTCTCGGGAAATGAGTGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTAGTGGAGAGGAAGGAGCAGCTAGAGCCACTGCTAGCTCAGAACTCTGCGTGTTCCGAAGCTGGTaGAGTTTAATATTCACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPSGEEGAARATASSELCVFRSW*SLIFTE Trigger: CTCCGTGAATATTAAACTCAACCAGCTTCGGAACAC...GCAGAGTTCTGAGCTAGCAGTGGCTCTAGCTGCTCCTTCCTCTCCACTAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
||
| CDS-3UTR CAA 90 bp | TCAGATGTGTCCCATCCCACCTCTACTCAGCCCAAAGCCGGCTGCCAGTTCTCCAATTCATGGTCTCCTTaGATCACCATCAAGGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SDVSHPTSTQPKAGCQFSNSWSP*ITIKGT Trigger: AGTTCCCTTGATGGTGATCAAAGGAGACCATGAATT...GGAGAACTGGCAGCCGGCTTTGGGCTGAGTAGAGGTGGGATGGGACACATCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | GGAGTGCTCAGGACCTGGGACTGGCTCTGCAGTGCTTTTTCCCTTGAGTACACAAAAAGGTCAAAGGTTTaGCAGACAAAGTGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GVLRTWDWLCSAFSLEYTKRSKV*QTKWPP Trigger: AGGAGGCCACTTTGTCTGCAAAACCTTTGACCTTTT...TGTGTACTCAAGGGAAAAAGCACTGCAGAGCCAGTCCCAGGTCCTGAGCACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | CCCACCCCACCAGAACAACCTAGACTGGGTGTGGTAGAGGATGGTCCTTACTCGTTCCTGTTATTGCTCTaGCTAAATCCCATGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PTPPEQPRLGVVEDGPYSFLLLL*LNPMVH Trigger: ATGGACCATGGGATTTAGCAAGAGCAATAACAGGAA...CGAGTAAGGACCATCCTCTACCACACCCAGTCTAGGTTGTTCTGGTGGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS TCA 90 bp | AGAGAAGGTCAATGTCCGACTCCTTCAGCAGTGGCTTCTTACACTTaGGCATGCTGTGAAGCAGCTCTTCCCCACAGAACTCTGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: REGQCPTPSAVASYT*ACCEAALPHRTLFH Trigger: ATGAAACAGAGTTCTGTGGGGAAGAGCTGCTTCACAGCATGCTCAAGTGTAAGAAGCCACTGCTGAAGGAGTCGGACATTGACCTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235031.2 |
||
| CDS TCA 90 bp | ATACCTTATAGGCATCTACAATTTCATCTCTCCCATTTACGGTCCTaGCAATGTAGACACCTGTGGGCACAAAGTGCCGGTCGTCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: IPYRHLQFHLSHLRS*QCRHLWAQSAGRRV Trigger: GACGCGACGACCGGCACTTTGTGCCCACAGGTGTCTACATTGTCAGGACCGTAAATGGGAGAGATGAAATTGTAGATGCCTATAAGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234911.2 |
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| CDS GCA 90 bp | CTTCACCCTGATAGGATTCATGTCTGGCCGGCTGGGCTTAGAGACTaGTTTCACAAATTTCTCAGCAAGCTGAATTCGCTGGTTGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHPDRIHVWPAGLRD*FHKFLSKLNSLVEV Trigger: CACTTCAACCAGCGAATTCAGCTTGCTGAGAAATTTGTGAAAGCAGTCTCTAAGCCCAGCCGGCCAGACATGAATCCTATCAGGGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CCA 90 bp | AAAAACTTGAATTTTGGGTCTGAAGAGGAAGGAGCAACTCGAGCCTaGTCTGGGATCTTCCACAGCTGGAGGCATTCTTTGCGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KNLNFGSEEEGATRA*SGIFHSWRHSLRIS Trigger: AGAGATCCGCAAAGAATGCCTCCAGCTGTGGAAGATCCCAGACCAGGCTCGAGTTGCTCCTTCCTCTTCAGACCCAAAATTCAAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS GCA 90 bp | GTTATACATGGAATATCGGGACGATGTTCCCTCCACAAGGGAATCTaGTTTGAAGGCATCTTTGAAATCATCAGAGCAGGGCTGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VIHGISGRCSLHKGI*FEGIFEIIRAGLLP Trigger: GGGAAGCAGCCCTGCTCTGATGATTTCAAAGATGCCTTCAAAGCAGATTCCCTTGTGGAGGGAACATCGTCCCGATATTCCATGTATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS-3UTR CAA 90 bp | GCTCATTCACCCCCAAGTTCTGCTTTATACCGGAACTGTACTTTGATAAGCCTTCCCTTGCGATCTGTGTaGTCCAGGACAAAATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: AHSPPSSALYRNCTLISLPLRSV*SRTKFR Trigger: TCGGAATTTTGTCCTGGACAACACAGATCGCAAGGG...AAGGCTTATCAAAGTACAGTTCCGGTATAAAGCAGAACTTGGGGGTGAATGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | CTTTTGTCCAAAGGAGGAAGCAGTGAAACAGTAACAAGGGGTCTGTATTCTTTGATCTTCTCCAGAGTTTaGGCAGTGAGCAGTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSKGGSSETVTRGLYSLIFSRV*AVSSVG Trigger: GCCCACACTGCTCACTGCCAAAACTCTGGAGAAGAT...CAAAGAATACAGACCCCTTGTTACTGTTTCACTGCTTCCTCCTTTGGACAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS-3UTR CAA 90 bp | GCCCTTGAGCAGCTGCTTTTCAGGTTGACTCCAGTTCTCAGACAGCAGAGTTTCAAGAACTTCCTGTTATaGCTCTTGCTAAATCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ALEQLLFRLTPVLRQQSFKNFLL*LLLNPM Trigger: CATGGGATTTAGCAAGAGCAATAACAGGAAGTTCTT...GAAACTCTGCTGTCTGAGAACTGGAGTCAACCTGAAAAGCAGCTGCTCAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS CCA 90 bp | GTAGAAGAACTTCCTGTTATTGCTCTTGCTAAATCCCATGGTCCATaGCTCATTTACGGTCCTGACAATGTAGACACCTGTGGGCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VEELPVIALAKSHGP*LIYGPDNVDTCGHK Trigger: TTTGTGCCCACAGGTGTCTACATTGTCAGGACCGTAAATGAGCCATGGACCATGGGATTTAGCAAGAGCAATAACAGGAAGTTCTTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS GCA 72 bp | AGACGCCTCGGATCATCTCATAGGGATTGGCTCTGGTaGGCGCTCGCCGCATCTCCTCCCCATCCAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: RRLGSSHRDWLW*ALAASPPHPGC Trigger: ACATCCTGGATGGGGAGGAGATGCGGCGAGCGCGCACCAGAGCCAATCCCTATGAGATGATCCGAGGCGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000129864.2 ENSMUST00000234388.2 ENSMUST00000234911.2 |
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| CDS CCA 72 bp | AGAAGACGCCTCGGATCATCTCATAGGGATTGGCTCTaGTGCGCGCTCGCCGCATCTCCTCCCCATCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRLGSSHRDWL*CALAASPPHPG Trigger: TCCTGGATGGGGAGGAGATGCGGCGAGCGCGCACCAGAGCCAATCCCTATGAGATGATCCGAGGCGTCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000129864.2 ENSMUST00000234388.2 ENSMUST00000234911.2 |
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| CDS CAA 90 bp | GCAACTCGAGCCTGGTCTGGGATCTTCCACAGCTGGAGGCATTCTTaGCGGATCTCTGCCTGCCTAGGCTCACTCAGGGTCGTGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ATRAWSGIFHSWRHS*RISACLGSLRVVSC Trigger: GCAGGACACGACCCTGAGTGAGCCTAGGCAGGCAGAGATCCGCAAAGAATGCCTCCAGCTGTGGAAGATCCCAGACCAGGCTCGAGTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS TCA 72 bp | CCCTGCAGCGTCAGACCCAAACCACGTCGACCTTTCTaGTTGGAGGTCTCCACGATGTCCTTCCGACCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PCSVRPKPRRPF*LEVSTMSFRPW Trigger: CCAGGGTCGGAAGGACATCGTGGAGACCTCCAATCAGAAAGGTCGACGTGGTTTGGGTCTGACGCTGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS CCA 72 bp | GGAGCAACTCGAGCCTGGTCTGGGATCTTCCACAGCTaGAGGCATTCTTTGCGGATCTCTGCCTGCCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GATRAWSGIFHS*RHSLRISACLG Trigger: GCCTAGGCAGGCAGAGATCCGCAAAGAATGCCTCCAGCTGTGGAAGATCCCAGACCAGGCTCGAGTTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CCA 72 bp | TCCTCCTTGGACAGCTTGTCTGGATCCTGGGGCTTCTaGGAGTCACGCATGTGGAAGCCATCTCCCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLDSLSGSWGF*ESRMWKPSPHS Trigger: GGAGTGGGGAGATGGCTTCCACATGCGTGACTCCCAGAAGCCCCAGGATCCAGACAAGCTGTCCAAGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CAA 72 bp | GCCTGGTCTGGGATCTTCCACAGCTGGAGGCATTCTTaGCGGATCTCTGCCTGCCTAGGCTCACTCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AWSGIFHSWRHS*RISACLGSLRV Trigger: GACCCTGAGTGAGCCTAGGCAGGCAGAGATCCGCAAAGAATGCCTCCAGCTGTGGAAGATCCCAGACCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS GCA 72 bp | TTGGGGCCCTTGAGCGTCATCCCAAAGCCCTTTGCGTaGCACTTCTTCCTCCACAGCACGTACTCGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LGPLSVIPKPFA*HFFLHSTYSEK Trigger: CTTCTCCGAGTACGTGCTGTGGAGGAAGAAGTGGCACGCAAAGGGCTTTGGGATGACGCTCAAGGGCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130052.9 ENSMUST00000234388.2 ENSMUST00000234911.2 ENSMUST00000235031.2 |
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| CDS GCA 72 bp | GATCTTCCACAGCTGGAGGCATTCTTTGCGGATCTCTaGCTGCCTAGGCTCACTCAGGGTCGTGTCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: DLPQLEAFFADL*LPRLTQGRVLH Trigger: GTGCAGGACACGACCCTGAGTGAGCCTAGGCAGGCAGAGATCCGCAAAGAATGCCTCCAGCTGTGGAAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CCA 72 bp | GCAGCGTCAGACCCAAACCACGTCGACCTTTCTGATTaGAGGTCTCCACGATGTCCTTCCGACCCTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AASDPNHVDLSD*RSPRCPSDPGC Trigger: ACAGCCAGGGTCGGAAGGACATCGTGGAGACCTCCAATCAGAAAGGTCGACGTGGTTTGGGTCTGACGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS CCA 72 bp | TTAGGAAGAAGACGCCTCGGATCATCTCATAGGGATTaGCTCTGGTGCGCGCTCGCCGCATCTCCTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LGRRRLGSSHRD*LWCALAASPPH Trigger: ATGGGGAGGAGATGCGGCGAGCGCGCACCAGAGCCAATCCCTATGAGATGATCCGAGGCGTCTTCTTCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000129864.2 ENSMUST00000234388.2 ENSMUST00000234911.2 |
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| CDS CCA 72 bp | AAAGTGCCGGTCGTCGCGTCCTGTGTAGCTGAGCTTTaGGGTGCCACCAGAGCCCTTGATGAGCTTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: KVPVVASCVAEL*GATRALDELHL Trigger: GAGATGAAGCTCATCAAGGGCTCTGGTGGCACCCCAAAGCTCAGCTACACAGGACGCGACGACCGGCACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
||
| CDS GCA 72 bp | TTCCACAGCTGGAGGCATTCTTTGCGGATCTCTGCCTaGCTAGGCTCACTCAGGGTCGTGTCCTGCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FHSWRHSLRISA*LGSLRVVSCTK Trigger: CTTTGTGCAGGACACGACCCTGAGTGAGCCTAGGCAGGCAGAGATCCGCAAAGAATGCCTCCAGCTGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS GCA 72 bp | GAGGAGAGAGGTTCATCGTCAGATGTGGAGCTGAGGTaGCGGGCAAGCTCCCCAATTCGCTTCTGTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EERGSSSDVELR*RASSPIRFCFL Trigger: CAAGAAACAGAAGCGAATTGGGGAGCTTGCCCGGCACCTCAGCTCCACATCTGACGATGAACCTCTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
||
| CDS GCA 72 bp | GGAATTTCAGTGGTACATTCTGGAAACCACGACACTTaGTCACAGGCATTGGGCTCCGGCTCATCTCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GISVVHSGNHDT*SQALGSGSSRQ Trigger: CTGGCGAGATGAGCCGGAGCCCAATGCCTGTGAGCAAGTGTCGTGGTTTCCAGAATGTACCACTGAAATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
||
| CDS GCA 72 bp | ATTCCCGAACATCATCTATGCCCACCTTCAGCCCTTTaGACACCACATACCGCTCTGAATTGGCAGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IPEHHLCPPSAL*TPHTALNWQAC Trigger: GCAGGCCTGCCAATTCAGAGCGGTATGTGGTGTGCAAAGGGCTGAAGGTGGGCATAGATGATGTTCGGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
||
| CDS GCA 72 bp | AGCCCAGGAGGAATTTCTGCTCGCTGCCAGACACCATaGAACGATACTCCAACACAGGACGGATCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPGGISARCQTP*NDTPTQDGSSP Trigger: TGGAGAAGATCCGTCCTGTGTTGGAGTATCGTTGCATGGTGTCTGGCAGCGAGCAGAAATTCCTCCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
||
| CDS CAA 72 bp | TACCGCTCTGAATTGGCAGGCCTGCTGGTGATAGGCTaGAAGAGACACACGCGTTCAAAGCAGCAGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: YRSELAGLLVIG*KRHTRSKQQYR Trigger: CCTGTACTGCTGCTTTGAACGCGTGTGTCTCTTCAAGCCTATCACCAGCAGGCCTGCCAATTCAGAGCGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
||
| CDS CAA 90 bp | CGGGACGATGTTCCCTCCACAAGGGAATCTGCTTTGAAGGCATCTTaGAAATCATCAGAGCAGGGCTGCTTCCCCTCGGTCTCACTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RDDVPSTRESALKAS*KSSEQGCFPSVSLS Trigger: TGACAGTGAGACCGAGGGGAAGCAGCCCTGCTCTGATGATTTCAAAGATGCCTTCAAAGCAGATTCCCTTGTGGAGGGAACATCGTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
||
| CDS GCA 72 bp | GCTTTGAAGGCATCTTTGAAATCATCAGAGCAGGGCTaGTTCCCCTCGGTCTCACTGTCAGATCCACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ALKASLKSSEQG*FPSVSLSDPLR Trigger: CCTCAGTGGATCTGACAGTGAGACCGAGGGGAAGCAGCCCTGCTCTGATGATTTCAAAGATGCCTTCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS CAA 72 bp | GTTCCCTCCACAAGGGAATCTGCTTTGAAGGCATCTTaGAAATCATCAGAGCAGGGCTGCTTCCCCTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: VPSTRESALKAS*KSSEQGCFPSV Trigger: GACCGAGGGGAAGCAGCCCTGCTCTGATGATTTCAAAGATGCCTTCAAAGCAGATTCCCTTGTGGAGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS TCA 72 bp | CAATGTCCGACTCCTTCAGCAGTGGCTTCTTACACTTaGGCATGCTGTGAAGCAGCTCTTCCCCACAGAACT | + |
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Preference number: 6 (lower is better) Translates to: QCPTPSAVASYT*ACCEAALPHRT Trigger: AGTTCTGTGGGGAAGAGCTGCTTCACAGCATGCTCAAGTGTAAGAAGCCACTGCTGAAGGAGTCGGACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235031.2 |
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| CDS CCA 72 bp | AATTTTGGGTCTGAAGAGGAAGGAGCAACTCGAGCCTaGTCTGGGATCTTCCACAGCTGGAGGCATTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: NFGSEEEGATRA*SGIFHSWRHSL Trigger: CAAAGAATGCCTCCAGCTGTGGAAGATCCCAGACCAGGCTCGAGTTGCTCCTTCCTCTTCAGACCCAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CAA 72 bp | AGGCCCACACTGAACGGTGTAAAAAGGTCAAAGGTTTaGCAGACAAAGTGGCCTCCTGTGCGGACAACAGAC | + |
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Preference number: 6 (lower is better) Translates to: RPTLNGVKRSKV*QTKWPPVRTTD Trigger: GTCTGTTGTCCGCACAGGAGGCCACTTTGTCTGCAAAACCTTTGACCTTTTTACACCGTTCAGTGTGGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 ENSMUST00000235031.2 |
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| CDS CAA 90 bp | TACATGGAATATCGGGACGATGTTCCCTCCACAAGGGAATCTGCTTaGAAGGCATCTTTGAAATCATCAGAGCAGGGCTGCTTCCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: YMEYRDDVPSTRESA*KASLKSSEQGCFPS Trigger: CGAGGGGAAGCAGCCCTGCTCTGATGATTTCAAAGATGCCTTCAAAGCAGATTCCCTTGTGGAGGGAACATCGTCCCGATATTCCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS GCA 72 bp | GGTCTCACTGTCAGATCCACTGAGGCTTGTAGCAGATaGTTTTGCTGCATGATTGACAGAGGAGAGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLTVRSTEACSR*FCCMIDRGERF Trigger: GAACCTCTCTCCTCTGTCAATCATGCAGCAAAAGCATCTGCTACAAGCCTCAGTGGATCTGACAGTGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS GCA 72 bp | TATTCACGGAGAAGAGGTATTCCCGAACATCATCTATaGCCACCTTCAGCCCTTTGCACACCACATACCGCT | + |
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Preference number: 6 (lower is better) Translates to: YSRRRGIPEHHL*PPSALCTPHTA Trigger: AGCGGTATGTGGTGTGCAAAGGGCTGAAGGTGGGCATAGATGATGTTCGGGAATACCTCTTCTCCGTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CCA 72 bp | CCGATACACCTCCTTCACCCTGATAGGATTCATGTCTaGCCGGCTGGGCTTAGAGACTGCTTTCACAAATTT | + |
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Preference number: 6 (lower is better) Translates to: PIHLLHPDRIHV*PAGLRDCFHKF Trigger: AAATTTGTGAAAGCAGTCTCTAAGCCCAGCCGGCCAGACATGAATCCTATCAGGGTGAAGGAGGTGTATCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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| CDS CAA 72 bp | TATCGGGACGATGTTCCCTCCACAAGGGAATCTGCTTaGAAGGCATCTTTGAAATCATCAGAGCAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: YRDDVPSTRESA*KASLKSSEQGC Trigger: GCAGCCCTGCTCTGATGATTTCAAAGATGCCTTCAAAGCAGATTCCCTTGTGGAGGGAACATCGTCCCGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS TCA 72 bp | AGGCATCTACAATTTCATCTCTCCCATTTACGGTCCTaGCAATGTAGACACCTGTGGGCACAAAGTGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RHLQFHLSHLRS*QCRHLWAQSAG Trigger: ACCGGCACTTTGTGCCCACAGGTGTCTACATTGTCAGGACCGTAAATGGGAGAGATGAAATTGTAGATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234911.2 |
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| CDS GCA 72 bp | GGAATATCGGGACGATGTTCCCTCCACAAGGGAATCTaGTTTGAAGGCATCTTTGAAATCATCAGAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GISGRCSLHKGI*FEGIFEIIRAG Trigger: CCCTGCTCTGATGATTTCAAAGATGCCTTCAAAGCAGATTCCCTTGTGGAGGGAACATCGTCCCGATATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000130423.4 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS CCA 72 bp | AAAGTAGAGAAGGTCAATGTCCGACTCCTTCAGCAGTaGCTTCCCAGAAGAGTCCAGGGGATTTGTGAACAT | + |
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Preference number: 6 (lower is better) Translates to: KVEKVNVRLLQQ*LPRRVQGICEH Trigger: ATGTTCACAAATCCCCTGGACTCTTCTGGGAAGCCACTGCTGAAGGAGTCGGACATTGACCTTCTCTACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024816.13 ENSMUST00000127695.2 ENSMUST00000130052.9 ENSMUST00000234388.2 ENSMUST00000234911.2 |
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| CDS CCA 72 bp | AAAGTAGAGAAGGTCAATGTCCGACTCCTTCAGCAGTaGCTTCTTACACTTGAGCATGCTGTGAAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: KVEKVNVRLLQQ*LLTLEHAVKQL Trigger: GAGCTGCTTCACAGCATGCTCAAGTGTAAGAAGCCACTGCTGAAGGAGTCGGACATTGACCTTCTCTACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235031.2 |
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| CDS CAA 72 bp | TATTTACCCAATCCCTCGCCTTCCCTGAAGCCCATCTaGGCCATAAGCCTCTGGGAAACACTGTTATACATG | + |
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Preference number: 6 (lower is better) Translates to: YLPNPSPSLKPI*AISLWETLLYM Trigger: CATGTATAACAGTGTTTCCCAGAGGCTTATGGCCAAGATGGGCTTCAGGGAAGGCGAGGGATTGGGTAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 ENSMUST00000235014.2 ENSMUST00000235031.2 |
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| CDS TCA 72 bp | AGGATGTCAAACACACTCTTACACTTGAGCATGCTGTaGAGCAGCTCTTCCCCACAGAACTCTGTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: RMSNTLLHLSML*SSSSPQNSVSS Trigger: AGATGAAACAGAGTTCTGTGGGGAAGAGCTGCTTCACAGCATGCTCAAGTGTAAGAGTGTGTTTGACATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024816.13 ENSMUST00000129864.2 ENSMUST00000234911.2 ENSMUST00000235014.2 |
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| CDS CCA 72 bp | CTTCCTGTTATTGCTCTTGCTAAATCCCATGGTCCATaGCTCATTTACGGTCCTGACAATGTAGACACCTGT | + |
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Preference number: 6 (lower is better) Translates to: LPVIALAKSHGP*LIYGPDNVDTC Trigger: ACAGGTGTCTACATTGTCAGGACCGTAAATGAGCCATGGACCATGGGATTTAGCAAGAGCAATAACAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024816.13 |
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| CDS CAA 90 bp | TTAAATTCATGGTCTCCTTTGATCACCATCAAGGGAACTACCAGGTaGACATCAGACTCAGTGTTCCGAAGCTGGTTGAGTTTAATATTC | + |
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Preference number: 6 (lower is better) Translates to: LNSWSPLITIKGTTR*TSDSVFRSWLSLIF Trigger: GAATATTAAACTCAACCAGCTTCGGAACACTGAGTCTGATGTCAACCTGGTAGTTCCCTTGATGGTGATCAAAGGAGACCATGAATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024816.13 ENSMUST00000234911.2 |
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