Pregenerated sensors for CMTM8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041012Ensembl transcript IDs: ENSMUST00000047013.4
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GAAGGACATCAGGAGACTTCAGGGTTCATTAGAAGCCGCAGCACTCCCCAAGTAGTGCCCTTCCTTCTCTaGGGAGACAGAAGATGCGTC | + |
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Preference number: 4 (lower is better) Translates to: EGHQETSGFIRSRSTPQVVPFLL*GDRRCV Trigger: GACGCATCTTCTGTCTCCCCAGAGAAGGAAGGGCAC...TACTTGGGGAGTGCTGCGGCTTCTAATGAACCCTGAAGTCTCCTGATGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR GCA 90 bp | TCTTTCTTTCTTTCTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGTCTTCTGTGGTGGTGACCGTGTaGGAGCGCGCGCGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SFFLSFNNSGIRSGVSSSVVVTV*ERARCC Trigger: GCAGCAGCGCGCGCGCTCGCACACGGTCACCACCAC...AGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR GCA 90 bp | GAAGGACATCAGGAGACTTCAGGGTTCATTAGAAGCCGCAGCACTCCCCAAGTAAAAGAACGAGGAGGCTaGCCAGCTGTTGAAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: EGHQETSGFIRSRSTPQVKERGG*PAVEVV Trigger: CACAACTTCAACAGCTGGGCAGCCTCCTCGTTCTTT...TACTTGGGGAGTGCTGCGGCTTCTAATGAACCCTGAAGTCTCCTGATGTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR TCA 90 bp | CTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGTCTTCTCTGTTATCTGAGGAGGCTGCCCAGCTGTTaGAGTTGTGCCCTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLITVGFVLVCRLLCYLRRLPSC*SCALPS Trigger: AGAAGGAAGGGCACAACTTCAACAGCTGGGCAGCCT...CCTCAGATAACAGAGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR GCA 90 bp | CTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGTCTTCTCTGTTATCTGAGGCGTAAGCGAAGCTGCTaGTGGTGGTGGAGAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLITVGFVLVCRLLCYLRRKRSC*WWWRSS Trigger: AGAACTTCTCCACCACCAGCAGCAGCTTCGCTTACG...CCTCAGATAACAGAGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR CCA 90 bp | TTTCTTTCTTTCTTTCTTTCTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGAGCACAGGCCCACTGTaGTCCAGGGCACCTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: FLSFFLSFNNSGIRSGVSSTGPL*SRAPGE Trigger: TTCCCCAGGTGCCCTGGACCACAGTGGGCCTGTGCT...CGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAGAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR GCA 90 bp | CTTTCTTTCTTTCTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGTCTTCTCGGTCGTAAGCGAAGCTaGTGCTGGTGGTGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LSFFLLITVGFVLVCRLLGRKRS*CWWWRS Trigger: ACTTCTCCACCACCAGCAGCAGCTTCGCTTACGACC...GAGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR GCA 90 bp | CTTTCTTTCTTTCTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGTCTTCTCCAGCTGTTGAAGTTGTaGCCTTCCTTCTCTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSFFLLITVGFVLVCRLLQLLKL*PSFSGE Trigger: CTCCCCAGAGAAGGAAGGGCACAACTTCAACAGCTG...GAGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR CCA 90 bp | TCTTTCTTTCTTTCTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGTCTTCTCGAAGCTGCTGCTGGTaGTGGAGAAGTTCTCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: SFFLSFNNSGIRSGVSSSRSCCW*WRSSPQ Trigger: TTGCGGAGAACTTCTCCACCACCAGCAGCAGCTTCG...AGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR CCA 90 bp | TTTCTTTCTTTCTTTCTTTCTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGAAGCGAAGCTGCTGCTaGTGGTGGAGAAGTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: FLSFFLSFNNSGIRSGVSKRSCC*WWRSSP Trigger: CGGAGAACTTCTCCACCACCAGCAGCAGCTTCGCTT...CGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAGAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS TCA 90 bp | CCCTTCCTTCTCTGGGGAGACAGAAGATGCGTCCACTATGGCAGCTaGGAAGTACAAGACGAAGGCACTGCCATTAAAGCACAGGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: PFLLWGDRRCVHYGS*EVQDEGTAIKAQAH Trigger: GTGGGCCTGTGCTTTAATGGCAGTGCCTTCGTCTTGTACTTCTCAGCTGCCATAGTGGACGCATCTTCTGTCTCCCCAGAGAAGGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCTTTCTTTCTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGTCTTCTGCCCAGCTGTTGAAGTaGTGCCCTTCCTTCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SFFLSFNNSGIRSGVSSSAQLLK*CPSFSG Trigger: CCCAGAGAAGGAAGGGCACAACTTCAACAGCTGGGC...AGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCTTTCTTTCTTTTAATAACAGTGGGATTCGTTCTGGTGTGTCGTCTTCTGAGGCTGCCCAGCTGTaGAAGTTGTGCCCTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SFFLSFNNSGIRSGVSSSEAAQL*KLCPSF Trigger: GAAGGAAGGGCACAACTTCAACAGCTGGGCAGCCTC...AGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS GCA 72 bp | GCGGGGTACGGAGGAACTCTCGGTCGTAAGCGAAGCTaGTGCTGGTGGTGGAGAAGTTCTCCGCAAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: AGYGGTLGRKRS*CWWWRSSPQRS Trigger: GCTCCTTTGCGGAGAACTTCTCCACCACCAGCAGCAGCTTCGCTTACGACCGAGAGTTCCTCCGTACCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS CCA 72 bp | CTTCCTTCTCTGGGGAGACAGAAGATGCGTCCACTATaGCAGCTGAGAAGTACAAGACGAAGGCACTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LPSLGRQKMRPL*QLRSTRRRHCH Trigger: ATGGCAGTGCCTTCGTCTTGTACTTCTCAGCTGCCATAGTGGACGCATCTTCTGTCTCCCCAGAGAAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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| CDS TCA 72 bp | CTCTGGGGAGACAGAAGATGCGTCCACTATGGCAGCTaGGAAGTACAAGACGAAGGCACTGCCATTAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LWGDRRCVHYGS*EVQDEGTAIKA Trigger: TGCTTTAATGGCAGTGCCTTCGTCTTGTACTTCTCAGCTGCCATAGTGGACGCATCTTCTGTCTCCCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047013.4 |
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