Pregenerated sensors for CMTM7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032436Ensembl transcript IDs: ENSMUST00000035009.16, ENSMUST00000084867.9, ENSMUST00000216760.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCCAGTATCCTGGCAAAGCAGGGAAGGCACAGGCCTTGTCGCCTaGAGAGTCCACAGCCATGGCGAGGGTCCTCCAGAGGCTGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SPVSWQSREGTGLVA*RVHSHGEGPPEAVA Trigger: GGCCACAGCCTCTGGAGGACCCTCGCCATGGCTGTGGACTCTTCAGGCGACAAGGCCTGTGCCTTCCCTGCTTTGCCAGGATACTGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| 3UTR GCA 90 bp | AGGCCATCAGATCCCATTACTGATGGTTGTGAGCCACCATGTAGTTaGTGGGAATTGAACTCAGGACCTCTGGAAACTGCTCTCTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: RPSDPITDGCEPPCS*WELNSGPLETALWC Trigger: ACACCAGAGAGCAGTTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTACATGGTGGCTCACAACCATCAGTAATGGGATCTGATGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR CCA 90 bp | CCATCAGATCCCATTACTGATGGTTGTGAGCCACCATGTAGTTGCTaGGAATTGAACTCAGGACCTCTGGAAACTGCTCTCTGGTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PSDPITDGCEPPCSC*ELNSGPLETALWCS Trigger: AGAACACCAGAGAGCAGTTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTACATGGTGGCTCACAACCATCAGTAATGGGATCTGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGCTTATTCTGGGAACAAGGGAAGCCCACCCAGGAGAGCATATTAGATGTAAGCCTTTACTGGGCTaGGTGAGTCTCTCGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GRLILGTREAHPGEHIRCKPLLG*VSLSWL Trigger: AAGCCACGAGAGACTCACGCAGCCCAGTAAAGGCTT...ACATCTAATATGCTCTCCTGGGTGGGCTTCCCTTGTTCCCAGAATAAGCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCCACCATGTAGTTGCTGGGAATTGAACTCAGGACCTCTGGAAACTGCTCGAATCTGGCCGTACTaGAAGCCTTTACTGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: CEPPCSCWELNSGPLETARIWPY*KPLLGC Trigger: GCAGCCCAGTAAAGGCTTGCAGTACGGCCAGATTCG...AGCAGTTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTACATGGTGGCTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAGAAGAGGCCATCAGATCCCATTACTGATGGTTGTGAGCCACCATGTAGTGCAGCCATCTCAAGGTaGAGCTTTCTTGGCAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: HQKRPSDPITDGCEPPCSAAISR*SFLGKG Trigger: GCCTTTGCCAAGAAAGCTGCACCTTGAGATGGCTGC...ACTACATGGTGGCTCACAACCATCAGTAATGGGATCTGATGGCCTCTTCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR CAA 90 bp | GAACTCAGGACCTCTGGAAACTGCTCTCTGGTGTTCTCTTTCTTCTaGGGTTCTCAGCAGCCATCTCAAGGTGCAGCTTTCTTGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: ELRTSGNCSLVFSFF*GSQQPSQGAAFLAK Trigger: CTTTGCCAAGAAAGCTGCACCTTGAGATGGCTGCTGAGAACCCAAGAAGAAAGAGAACACCAGAGAGCAGTTTCCAGAGGTCCTGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR TCA 72 bp | TCCTGGCAAAGCAGGGAAGGCACAGGCCTTGTCGCCTaGAGAGTCCACAGCCATGGCGAGGGTCCTCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SWQSREGTGLVA*RVHSHGEGPPE Trigger: CTCTGGAGGACCCTCGCCATGGCTGTGGACTCTTCAGGCGACAAGGCCTGTGCCTTCCCTGCTTTGCCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| 3UTR TCA 72 bp | AGTCTCTCTACTGTGCTCAGAGCAGTCCTTGGTACCTaGGTGGTGCTAACAGCCCAGAACGGAGGGATGTCC | + |
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Preference number: 3 (lower is better) Translates to: SLSTVLRAVLGT*VVLTAQNGGMS Trigger: GGACATCCCTCCGTTCTGGGCTGTTAGCACCACTCAGGTACCAAGGACTGCTCTGAGCACAGTAGAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| 3UTR GCA 72 bp | TGTATAGTGTTGACGCTGTTCCGAATCTGGCCGTACTaGAAGCCTTTACTGGGCTGCGTGAGTCTCTCGTGG | + |
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Preference number: 3 (lower is better) Translates to: CIVLTLFRIWPY*KPLLGCVSLSW Trigger: CCACGAGAGACTCACGCAGCCCAGTAAAGGCTTGCAGTACGGCCAGATTCGGAACAGCGTCAACACTATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR CCA 72 bp | CCTCTGGAAACTGCTCTCTGGTGTTCTCTTTCTTCTTaGGTTCTCAGCAGCCATCTCAAGGTGCAGCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PLETALWCSLSS*VLSSHLKVQLS Trigger: AGAAAGCTGCACCTTGAGATGGCTGCTGAGAACCCAAGAAGAAAGAGAACACCAGAGAGCAGTTTCCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR CCA 72 bp | CCCATTACTGATGGTTGTGAGCCACCATGTAGTTGCTaGGAATTGAACTCAGGACCTCTGGAAACTGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PITDGCEPPCSC*ELNSGPLETAL Trigger: GAGAGCAGTTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTACATGGTGGCTCACAACCATCAGTAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR-3UTR CAA 90 bp | CCATGTAGTTGCTGGGAATTGAACTCAGGACCTCTGGAAACTGCTCTCTGGTGTCAAGGTGCAGCTTTCTaGGCAAAGGCCATAATGTGT | + |
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Preference number: 3 (lower is better) Translates to: PCSCWELNSGPLETALWCQGAAF*AKAIMC Trigger: ACACATTATGGCCTTTGCCAAGAAAGCTGCACCTTG...ACACCAGAGAGCAGTTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR GCA 72 bp | CTCTTTCTTCTTGGGTTCTCAGCAGCCATCTCAAGGTaGAGCTTTCTTGGCAAAGGCCATAATGTGTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: LFLLGFSAAISR*SFLGKGHNVFQ Trigger: TTGGAACACATTATGGCCTTTGCCAAGAAAGCTGCACCTTGAGATGGCTGCTGAGAACCCAAGAAGAAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS-3UTR TCA 90 bp | TGTCGCCTGAAGAGTCCACAGCCATGGCGAGGGTCCTCCAGAGGCTGTGGCCTCTCACTATGGAGGCGATaGGGAGAAGCAGCGTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: CRLKSPQPWRGSSRGCGLSLWRR*GEAACR Trigger: TCGGCACGCTGCTTCTCCTCATCGCCTCCATAGTGA...GAGGCCACAGCCTCTGGAGGACCCTCGCCATGGCTGTGGACTCTTCAGGCGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035009.16 |
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| 3UTR CAA 72 bp | GCCCAGTATCCTGGCAAAGCAGGGAAGGCACAGGCCTaGTCGCCTGAAGAGTCCACAGCCATGGCGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AQYPGKAGKAQA*SPEESTAMARV Trigger: GACCCTCGCCATGGCTGTGGACTCTTCAGGCGACAAGGCCTGTGCCTTCCCTGCTTTGCCAGGATACTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGAGACAGGATGGCCACATAGTGTTTCTTCTGGCTCTTCACTTAGAGACGCGCCGCTGCTGCACGTaGTCCGGACGAGCCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: GRRQDGHIVFLLALHLETRRCCT*SGRAPI Trigger: GATCGGGGCTCGTCCGGACCACGTGCAGCAGCGGCG...CGTCTCTAAGTGAAGAGCCAGAAGAAACACTATGTGGCCATCCTGTCTCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR CCA 90 bp | CAGATCCACAAGTCTCTCTACTGTGCTCAGAGCAGTCCTTGGTACCTGAGTGGTCGCCGCTGCTGCACGTaGTCCGGACGAGCCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: QIHKSLYCAQSSPWYLSGRRCCT*SGRAPI Trigger: GATCGGGGCTCGTCCGGACCACGTGCAGCAGCGGCG...ACCACTCAGGTACCAAGGACTGCTCTGAGCACAGTAGAGAGACTTGTGGATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR CCA 90 bp | TGGAAACTGCTCTCTGGTGTTCTCTTTCTTCTTGGGTTCTCAGCAGCCATCTCACGCCGCTGCTGCACGTaGTCCGGACGAGCCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: WKLLSGVLFLLGFSAAISRRCCT*SGRAPI Trigger: GATCGGGGCTCGTCCGGACCACGTGCAGCAGCGGCG...TGAGATGGCTGCTGAGAACCCAAGAAGAAAGAGAACACCAGAGAGCAGTTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS-3UTR TCA 90 bp | GATGCCCAGGAGCCCAGTATCCTGGCAAAGCAGGGAAGGCACAGGCCTTGTCGCGCACCAGGTAAAAGATaGGGATCATTATCAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: DAQEPSILAKQGRHRPCRAPGKR*GSLSGR Trigger: GCGACCTGATAATGATCCTCATCTTTTACCTGGTGC...GCGACAAGGCCTGTGCCTTCCCTGCTTTGCCAGGATACTGGGCTCCTGGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR TCA 90 bp | GATGCCCAGGAGCCCAGTATCCTGGCAAAGCAGGGAAGGCACAGGCCTTGTCGCACTGGGTTATACAGGTaGTCTTGTAGGACAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: DAQEPSILAKQGRHRPCRTGLYR*SCRTAT Trigger: TGTGGCTGTCCTACAAGATCACCTGTATAACCCAGT...GCGACAAGGCCTGTGCCTTCCCTGCTTTGCCAGGATACTGGGCTCCTGGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR CCA 90 bp | TGCAGGCAGATCCACAAGTCTCTCTACTGTGCTCAGAGCAGTCCTTGGTACCTGCTAGGCAGAGGAAGCTaGCCAGGAACCCAAAGATCG | + |
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Preference number: 4 (lower is better) Translates to: CRQIHKSLYCAQSSPWYLLGRGS*PGTQRS Trigger: CGATCTTTGGGTTCCTGGCCAGCTTCCTCTGCCTAG...CAGGTACCAAGGACTGCTCTGAGCACAGTAGAGAGACTTGTGGATCTGCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR TCA 90 bp | AGTATCCTGGCAAAGCAGGGAAGGCACAGGCCTTGTCGCCTGAAGAGTCCACAGACTGGGTTATACAGGTaGTCTTGTAGGACAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: SILAKQGRHRPCRLKSPQTGLYR*SCRTAT Trigger: TGTGGCTGTCCTACAAGATCACCTGTATAACCCAGT...CTGTGGACTCTTCAGGCGACAAGGCCTGTGCCTTCCCTGCTTTGCCAGGATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR GCA 90 bp | ATAGTGTTGACGCTGTTCCGAATCTGGCCGTACTGCAAGCCTTTACTGGGCTGCAATCTGTATCCCATCTaGGCCACTTTGAACAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: IVLTLFRIWPYCKPLLGCNLYPI*ATLNRA Trigger: CGCCCTGTTCAAAGTGGCGCAGATGGGATACAGATT...GCAGCCCAGTAAAGGCTTGCAGTACGGCCAGATTCGGAACAGCGTCAACACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR CAA 72 bp | TTGGGTTCTCAGCAGCCATCTCAAGGTGCAGCTTTCTaGGCAAAGGCCATAATGTGTTCCAAGAGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LGSQQPSQGAAF*AKAIMCSKRAE Trigger: CTCAGCCCTCTTGGAACACATTATGGCCTTTGCCAAGAAAGCTGCACCTTGAGATGGCTGCTGAGAACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS-3UTR TCA 90 bp | AAGTCTCTCTACTGTGCTCAGAGCAGTCCTTGGTACCTGAGTGGTGCTAACAGCTCAGGCAGATGCATCTaGAGACTGGGTTATACAGGT | + |
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Preference number: 4 (lower is better) Translates to: KSLYCAQSSPWYLSGANSSGRCI*RLGYTG Trigger: ACCTGTATAACCCAGTCTTCAGATGCATCTGCCTGA...GCTGTTAGCACCACTCAGGTACCAAGGACTGCTCTGAGCACAGTAGAGAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| 3UTR CAA 72 bp | ACCTCTGGAAACTGCTCTCTGGTGTTCTCTTTCTTCTaGGGTTCTCAGCAGCCATCTCAAGGTGCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TSGNCSLVFSFF*GSQQPSQGAAF Trigger: GAAAGCTGCACCTTGAGATGGCTGCTGAGAACCCAAGAAGAAAGAGAACACCAGAGAGCAGTTTCCAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| 3UTR CAA 72 bp | ACTGATGGTTGTGAGCCACCATGTAGTTGCTGGGAATaGAACTCAGGACCTCTGGAAACTGCTCTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCSCWE*NSGPLETALWC Trigger: ACACCAGAGAGCAGTTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTACATGGTGGCTCACAACCATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS-3UTR TCA 90 bp | GATAGGGGCAGGAGACAGGATGGCCACATAGTGTTTCTTCTGGCTCTTCACTTAGCACCAGGTAAAAGATaGGGATCATTATCAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: DRGRRQDGHIVFLLALHLAPGKR*GSLSGR Trigger: GCGACCTGATAATGATCCTCATCTTTTACCTGGTGC...TAAGTGAAGAGCCAGAAGAAACACTATGTGGCCATCCTGTCTCCTGCCCCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR CCA 90 bp | TGTGAGCCACCATGTAGTTGCTGGGAATTGAACTCAGGACCTCTGGAAACTGCTATTCCCTTGCAGTTCTaGAAGCCAGCAACCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: CEPPCSCWELNSGPLETAIPLQF*KPATRN Trigger: ATTTCTGGTTGCTGGCTTCCAGAACTGCAAGGGAAT...AGCAGTTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTACATGGTGGCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS-3UTR TCA 90 bp | AGACAGGATGGCCACATAGTGTTTCTTCTGGCTCTTCACTTAGAGACGCTTCAATCAGGCAGATGCATCTaGAGACTGGGTTATACAGGT | + |
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Preference number: 4 (lower is better) Translates to: RQDGHIVFLLALHLETLQSGRCI*RLGYTG Trigger: ACCTGTATAACCCAGTCTTCAGATGCATCTGCCTGA...TTGAAGCGTCTCTAAGTGAAGAGCCAGAAGAAACACTATGTGGCCATCCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS-3UTR CCA 90 bp | AGACAGGATGGCCACATAGTGTTTCTTCTGGCTCTTCACTTAGAGACGCTTCAATCTGGTTGTAACTCTTaGAGGCTATCACTATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RQDGHIVFLLALHLETLQSGCNS*RLSLWR Trigger: CCTCCATAGTGATAGCCTCCAAGAGTTACAACCAGA...TTGAAGCGTCTCTAAGTGAAGAGCCAGAAGAAACACTATGTGGCCATCCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035009.16 |
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| CDS CCA 90 bp | GGTGAGCGGGTACACCCGGTCCAGCAGTCCCTCCGAGGGCTGGCCTaGCCCCAGCGCGCCGCCGCTGCTGCACGTGGTCCGGACGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: GERVHPVQQSLRGLA*PQRAAAAARGPDEP Trigger: GGGCTCGTCCGGACCACGTGCAGCAGCGGCGGCGCGCTGGGGCCAGGCCAGCCCTCGGAGGGACTGCTGGACCGGGTGTACCCGCTCACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 ENSMUST00000216760.2 |
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| CDS CCA 90 bp | GCAATCAGCAGGGTGACCATCTGCGCCACTTTGAACAGGGCGCCGTaGGTGAGCGGGTACACCCGGTCCAGCAGTCCCTCCGAGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: AISRVTICATLNRAP*VSGYTRSSSPSEGW Trigger: CCAGCCCTCGGAGGGACTGCTGGACCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGTCACCCTGCTGATTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS CCA 90 bp | ACCAGAAATCTGTATCCCATCTGCGCCACTTTGAACAGGGCGCCGTaGGTGAGCGGGTACACCCGGTCCAGCAGTCCCTCCGAGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TRNLYPICATLNRAP*VSGYTRSSSPSEGW Trigger: CCAGCCCTCGGAGGGACTGCTGGACCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGGATACAGATTTCTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS GCA 90 bp | CCCTTGCAGTTCTGGAAGCCAGCAACCAGAAATCTGTATCCCATCTaGGCCACTTTGAACAGGGCGCCGTGGGTGAGCGGGTACACCCGG | + |
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Preference number: 5 (lower is better) Translates to: PLQFWKPATRNLYPI*ATLNRAPWVSGYTR Trigger: CCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGGATACAGATTTCTGGTTGCTGGCTTCCAGAACTGCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS CCA 72 bp | GTACACCCGGTCCAGCAGTCCCTCCGAGGGCTGGCCTaGCCCCAGCGCGCCGCCGCTGCTGCACGTGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VHPVQQSLRGLA*PQRAAAAARGP Trigger: CGGACCACGTGCAGCAGCGGCGGCGCGCTGGGGCCAGGCCAGCCCTCGGAGGGACTGCTGGACCGGGTGTAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 ENSMUST00000216760.2 |
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| CDS CCA 72 bp | AGCGGGTACACCCGGTCCAGCAGTCCCTCCGAGGGCTaGCCTGGCCCCAGCGCGCCGCCGCTGCTGCACGTG | + |
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Preference number: 6 (lower is better) Translates to: SGYTRSSSPSEG*PGPSAPPLLHV Trigger: CACGTGCAGCAGCGGCGGCGCGCTGGGGCCAGGCCAGCCCTCGGAGGGACTGCTGGACCGGGTGTACCCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 ENSMUST00000216760.2 |
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| CDS CCA 72 bp | AGGGTGACCATCTGCGCCACTTTGAACAGGGCGCCGTaGGTGAGCGGGTACACCCGGTCCAGCAGTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RVTICATLNRAP*VSGYTRSSSPS Trigger: GGAGGGACTGCTGGACCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGTCACCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS CCA 72 bp | CTGTATCCCATCTGCGCCACTTTGAACAGGGCGCCGTaGGTGAGCGGGTACACCCGGTCCAGCAGTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LYPICATLNRAP*VSGYTRSSSPS Trigger: GGAGGGACTGCTGGACCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGGATACAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS CAA 72 bp | ATGAAGGCAATCAGCAGGGTGACCATCTGCGCCACTTaGAACAGGGCGCCGTGGGTGAGCGGGTACACCCGG | + |
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Preference number: 6 (lower is better) Translates to: MKAISRVTICAT*NRAPWVSGYTR Trigger: CCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGTCACCCTGCTGATTGCCTTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035009.16 ENSMUST00000084867.9 |
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| CDS CCA 72 bp | TGTAGGACAGCCACAAGCTCGCTAGGCAGAGGAAGCTaGCCAGGAACCCAAAGATCGCTCCGGCTACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CRTATSSLGRGS*PGTQRSLRLPG Trigger: GCCTGGTAGCCGGAGCGATCTTTGGGTTCCTGGCCAGCTTCCTCTGCCTAGCGAGCTTGTGGCTGTCCTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035009.16 |
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| CDS CAA 72 bp | CCAGCAACCAGAAATCTGTATCCCATCTGCGCCACTTaGAACAGGGCGCCGTGGGTGAGCGGGTACACCCGG | + |
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Preference number: 6 (lower is better) Translates to: PATRNLYPICAT*NRAPWVSGYTR Trigger: CCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGGATACAGATTTCTGGTTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS CAA 90 bp | TTCTGGAAGCCAGCAACCAGAAATCTGTATCCCATCTGCGCCACTTaGAACAGGGCGCCGTGGGTGAGCGGGTACACCCGGTCCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FWKPATRNLYPICAT*NRAPWVSGYTRSSS Trigger: ACTGCTGGACCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGGATACAGATTTCTGGTTGCTGGCTTCCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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| CDS GCA 72 bp | TTCTGGAAGCCAGCAACCAGAAATCTGTATCCCATCTaGGCCACTTTGAACAGGGCGCCGTGGGTGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: FWKPATRNLYPI*ATLNRAPWVSG Trigger: CCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGGATACAGATTTCTGGTTGCTGGCTTCCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216760.2 |
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