Pregenerated sensors for CMTM4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096188Ensembl transcript IDs: ENSMUST00000179802.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TTAGTGGAGGAAGGCAGCGTCCGGCAGCATCGGGCAGGCCCGCCCTaGCCTGCCCTGGGCTGGGGTGACCATGAGTCGTCCGGCAGCATC | + |
Preference number: 1 (lower is better) Translates to: LVEEGSVRQHRAGPP*PALGWGDHESSGSI Trigger: GATGCTGCCGGACGACTCATGGTCACCCCAGCCCAGGGCAGGGCAGGGCGGGCCTGCCCGATGCTGCCGGACGCTGCCTTCCTCCACTAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 90 bp | GCCGCGGTGCACGGGGAGCACCTCCTCAGCTCTCCTCGGCAGCCCTaGCACCCACTTCTGGGTTATGAACTACAAAGGACACTGCTCAGG | + |
Preference number: 1 (lower is better) Translates to: AAVHGEHLLSSPRQP*HPLLGYELQRTLLR Trigger: CCTGAGCAGTGTCCTTTGTAGTTCATAACCCAGAAGTGGGTGGCAGGGCTGCCGAGGAGAGCTGAGGAGGTGCTCCCCGTGCACCGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 90 bp | TCCTGTGCCCTGGCTTTCCCTAGCCCTCCACAGCACAGGACCTACTaGACTCAGGCTACCCAGAAACCCACCAGCGGCAGCCACAGTGTC | + |
Preference number: 1 (lower is better) Translates to: SCALAFPSPPQHRTY*TQATQKPTSGSHSV Trigger: GACACTGTGGCTGCCGCTGGTGGGTTTCTGGGTAGCCTGAGTGCAGTAGGTCCTGTGCTGTGGAGGGCTAGGGAAAGCCAGGGCACAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | CCCAGAAACCCACCAGCGGCAGCCACAGTGTCACCTAAATCCAAGTaGGGCAAATCCCAGAGCAAGTCTGGGGTGCTGCCAGGACACAGC | + |
Preference number: 1 (lower is better) Translates to: PRNPPAAATVSPKSK*GKSQSKSGVLPGHS Trigger: GCTGTGTCCTGGCAGCACCCCAGACTTGCTCTGGGATTTGCCCCACTTGGATTTAGGTGACACTGTGGCTGCCGCTGGTGGGTTTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR TCA 90 bp | CTTAGCCTATCTATCCTAGGAGACAGGGCAGACAACAGCCGGGACTaGCTGGCTAGGGTGGGAGGGCCAGGAGCCAAATGCAAGCGCTCA | + |
Preference number: 1 (lower is better) Translates to: LSLSILGDRADNSRD*LARVGGPGAKCKRS Trigger: TGAGCGCTTGCATTTGGCTCCTGGCCCTCCCACCCTAGCCAGTCAGTCCCGGCTGTTGTCTGCCCTGTCTCCTAGGATAGATAGGCTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | TGTGGACTCCCGCGCCCTGCTGTGGGGTTTGACAATAGCCACTCTTaGCCATCCAGCCTTCCAACACTGCTCTTCCCTGACCGATGCAGA | + |
Preference number: 1 (lower is better) Translates to: CGLPRPAVGFDNSHS*PSSLPTLLFPDRCR Trigger: TCTGCATCGGTCAGGGAAGAGCAGTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGGGCGCGGGAGTCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | GTTCCAGGACTTTTGATCATAGAGAAGACACTCGGGTGCCCAGAATaGCAGCAGTGCCCCGTGGAACATCCGTGGGAGGACGTGTCCTGG | + |
Preference number: 1 (lower is better) Translates to: VPGLLIIEKTLGCPE*QQCPVEHPWEDVSW Trigger: CCAGGACACGTCCTCCCACGGATGTTCCACGGGGCACTGCTGCCATTCTGGGCACCCGAGTGTCTTCTCTATGATCAAAAGTCCTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | AGACACAGGCTGACCCTATTTCCTGTGGACTCCCGCGCCCTGCTGTaGGGTTTGACAATAGCCACTCTTGGCCATCCAGCCTTCCAACAC | + |
Preference number: 1 (lower is better) Translates to: RHRLTLFPVDSRALL*GLTIATLGHPAFQH Trigger: GTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGGGCGCGGGAGTCCACAGGAAATAGGGTCAGCCTGTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | TGCAGGGTCAGGAAAACAGAACGGTGGCTAGGTTATCCTGTGCCCTaGCTTTCCCTAGCCCTCCACAGCACAGGACCTACTGCACTCAGG | + |
Preference number: 1 (lower is better) Translates to: CRVRKTERWLGYPVP*LSLALHSTGPTALR Trigger: CCTGAGTGCAGTAGGTCCTGTGCTGTGGAGGGCTAGGGAAAGCCAGGGCACAGGATAACCTAGCCACCGTTCTGTTTTCCTGACCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | ACACTCGGGTGCCCAGAATGGCAGCAGTGCCCCGTGGAACATCCGTaGGAGGACGTGTCCTGGTGCAGATTCAAGTATTCTCAAATCCTA | + |
Preference number: 1 (lower is better) Translates to: TLGCPEWQQCPVEHP*EDVSWCRFKYSQIL Trigger: TAGGATTTGAGAATACTTGAATCTGCACCAGGACACGTCCTCCCACGGATGTTCCACGGGGCACTGCTGCCATTCTGGGCACCCGAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 90 bp | GGCAGCCCTGCCACCCACTTCTGGGTTATGAACTACAAAGGACACTaGTCAGGTTGTGAACGGTCCTTAGGACATAGTGGGGGCACTGTA | + |
Preference number: 1 (lower is better) Translates to: GSPATHFWVMNYKGH*SGCERSLGHSGGTV Trigger: TACAGTGCCCCCACTATGTCCTAAGGACCGTTCACAACCTGAGCAGTGTCCTTTGTAGTTCATAACCCAGAAGTGGGTGGCAGGGCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | AAGCATGGGACTTTTGTGTGCTCTGAACACAGATGCTGTCATCACTaGCACCACCTCCATCACTACAAGGATGGACACAAGTCTCCACGC | + |
Preference number: 1 (lower is better) Translates to: KHGTFVCSEHRCCHH*HHLHHYKDGHKSPR Trigger: GCGTGGAGACTTGTGTCCATCCTTGTAGTGATGGAGGTGGTGCCAGTGATGACAGCATCTGTGTTCAGAGCACACAAAAGTCCCATGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 90 bp | TGGCAGCAGTGCCCCGTGGAACATCCGTGGGAGGACGTGTCCTGGTaGAGATTCAAGTATTCTCAAATCCTAGATAAACTGACTCAGAAT | + |
Preference number: 1 (lower is better) Translates to: WQQCPVEHPWEDVSW*RFKYSQILDKLTQN Trigger: ATTCTGAGTCAGTTTATCTAGGATTTGAGAATACTTGAATCTGCACCAGGACACGTCCTCCCACGGATGTTCCACGGGGCACTGCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 90 bp | AAAAAGACAGTTCGGCAGGAGCACACTAAGCATGGGACTTTTGTGTaGTCTGAACACAGATGCTGTCATCACTGGCACCACCTCCATCAC | + |
Preference number: 1 (lower is better) Translates to: KKTVRQEHTKHGTFV*SEHRCCHHWHHLHH Trigger: GTGATGGAGGTGGTGCCAGTGATGACAGCATCTGTGTTCAGAGCACACAAAAGTCCCATGCTTAGTGTGCTCCTGCCGAACTGTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | TTACCCTCTGAGCCTTTGGCAGGGAAGGTAGAGAAGACTGGTACCTaGCATTCAGTCGAGATCAACAGGGCCAAAATACACTTTCTCCGA | + |
Preference number: 1 (lower is better) Translates to: LPSEPLAGKVEKTGT*HSVEINRAKIHFLR Trigger: TCGGAGAAAGTGTATTTTGGCCCTGTTGATCTCGACTGAATGCCAGGTACCAGTCTTCTCTACCTTCCCTGCCAAAGGCTCAGAGGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR TCA 90 bp | CTGTACCACCACACTATCCTCCTGCCAGCCACATCTTCTCCTTGGTaGGGCGACCCACAAAATCTTAGAGCTACAAGATCTGTAAACATC | + |
Preference number: 1 (lower is better) Translates to: LYHHTILLPATSSPW*GDPQNLRATRSVNI Trigger: GATGTTTACAGATCTTGTAGCTCTAAGATTTTGTGGGTCGCCTCACCAAGGAGAAGATGTGGCTGGCAGGAGGATAGTGTGGTGGTACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 90 bp | CTAGCTGGGTCATCCTCTGAACATGGGAACATGCCAACCTGGAACTaGAGCAGAACTGGATTATACTGGATATTGGTTTTAGGGAGCCAG | + |
Preference number: 1 (lower is better) Translates to: LAGSSSEHGNMPTWN*SRTGLYWILVLGSQ Trigger: CTGGCTCCCTAAAACCAATATCCAGTATAATCCAGTTCTGCTGCAGTTCCAGGTTGGCATGTTCCCATGTTCAGAGGATGACCCAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 90 bp | TACACTTTCTCCGAAGACAAGTTAATATCCATCAAGACTACCAAGTaGCAGAGGGTGTCAACCCCATGTCTCCACGAACACACCACATGT | + |
Preference number: 1 (lower is better) Translates to: YTFSEDKLISIKTTK*QRVSTPCLHEHTTC Trigger: ACATGTGGTGTGTTCGTGGAGACATGGGGTTGACACCCTCTGGCACTTGGTAGTCTTGATGGATATTAACTTGTCTTCGGAGAAAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CCA 90 bp | CTAGCCAATTCTTTAAGCCCTGAATCACTGTACCCTTCAGTGCCATaGAAAGGGGACAGGGTTCTGGAACTTGCTAAATCAGTTCTGAAA | + |
Preference number: 1 (lower is better) Translates to: LANSLSPESLYPSVP*KGDRVLELAKSVLK Trigger: TTTCAGAACTGATTTAGCAAGTTCCAGAACCCTGTCCCCTTTCCATGGCACTGAAGGGTACAGTGATTCAGGGCTTAAAGAATTGGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR TCA 90 bp | GACACAATACACTGTTCAAGAACCTATGGTCTAAATTTGATTCTGTaGGATGGCTTTGAACTCAATGGGCTTGGGTCCCTCCACCCCTTT | + |
Preference number: 1 (lower is better) Translates to: DTIHCSRTYGLNLIL*DGFELNGLGSLHPF Trigger: AAAGGGGTGGAGGGACCCAAGCCCATTGAGTTCAAAGCCATCTCACAGAATCAAATTTAGACCATAGGTTCTTGAACAGTGTATTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR TCA 90 bp | CAGATCTGTCAGTCACTGGGCCACTCTAGGCAACCTTTCCCAAAGTaGATTTTTACCAAACAGGACAAAATTCAGCTGGTTCACACAAAA | + |
Preference number: 1 (lower is better) Translates to: QICQSLGHSRQPFPK*IFTKQDKIQLVHTK Trigger: TTTTGTGTGAACCAGCTGAATTTTGTCCTGTTTGGTAAAAATTCACTTTGGGAAAGGTTGCCTAGAGTGGCCCAGTGACTGACAGATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR TCA 90 bp | TGTTATCTGTTAACTAAATGTACATCCCCGCCCCAATTCCATGATTaGCAAGAGTGCTTATGTGACACATGGAAGGCACCAAAGGTGAAG | + |
Preference number: 1 (lower is better) Translates to: CYLLTKCTSPPQFHD*QECLCDTWKAPKVK Trigger: CTTCACCTTTGGTGCCTTCCATGTGTCACATAAGCACTCTTGTCAATCATGGAATTGGGGCGGGGATGTACATTTAGTTAACAGATAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR TCA 90 bp | CGGATACAGATGGAGTCTTTGCAACCCCATTTAAAGGGAATTCTCTaGGGCAGAAAGCCTGATTTTGATTATATAGGTATACCAACCAAG | + |
Preference number: 1 (lower is better) Translates to: RIQMESLQPHLKGIL*GRKPDFDYIGIPTK Trigger: CTTGGTTGGTATACCTATATAATCAAAATCAGGCTTTCTGCCTCAGAGAATTCCCTTTAAATGGGGTTGCAAAGACTCCATCTGTATCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 90 bp | AATAGTAACCAAGATATAAATATTACAATGATTCTGTCACTAAGATaGAAATTGCTCTCAAGTCTCTTAGGCCCTAAGACACCACCACAT | + |
Preference number: 1 (lower is better) Translates to: NSNQDINITMILSLR*KLLSSLLGPKTPPH Trigger: ATGTGGTGGTGTCTTAGGGCCTAAGAGACTTGAGAGCAATTTGCATCTTAGTGACAGAATCATTGTAATATTTATATCTTGGTTACTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR CCA 90 bp | AGGTTGGAAAAGCACAATGTGCACAATGTGCCGACTCACTCAACTCGGCCAGCAGGCAGCAGTGCCCCGTaGAACATCCGTGGGAGGACG | + |
Preference number: 2 (lower is better) Translates to: RLEKHNVHNVPTHSTRPAGSSAP*NIRGRT Trigger: CGTCCTCCCACGGATGTTCCACGGGGCACTGCTGCC...TGCTGGCCGAGTTGAGTGAGTCGGCACATTGTGCACATTGTGCTTTTCCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 90 bp | CTGCTTCCTCTGCCGCTTTCACCTGAGAAGGTAAAAGTGCTGGAATaGCAACTCAGCCTCAGGGTGTGCATGTTAGGTGGGCAGGGCCCC | + |
Preference number: 2 (lower is better) Translates to: LLPLPLSPEKVKVLE*QLSLRVCMLGGQGP Trigger: GGGGCCCTGCCCACCTAACATGCACACCCTGAGGCTGAGTTGCAATTCCAGCACTTTTACCTTCTCAGGTGAAAGCGGCAGAGGAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR GCA 90 bp | GTAAGTCTTCCTGCCAAGAGTCCTAGAAGGGCCCTAGGGTCCCTCTCAGTGAGAGAGAAGACACTCGGGTaGCCAGAATGGCAGCAGTGC | + |
Preference number: 2 (lower is better) Translates to: VSLPAKSPRRALGSLSVREKTLG*PEWQQC Trigger: GCACTGCTGCCATTCTGGGCACCCGAGTGTCTTCTC...TCTCACTGAGAGGGACCCTAGGGCCCTTCTAGGACTCTTGGCAGGAAGACTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR CCA 90 bp | TTCTTGACTGCAGTCTTACCCTCTGAGCCTTTGGCAGGGAAGGTAGAGAAGACTCTCGGGTGCCCAGAATaGCAGCAGTGCCCCGTGGAA | + |
Preference number: 2 (lower is better) Translates to: FLTAVLPSEPLAGKVEKTLGCPE*QQCPVE Trigger: TTCCACGGGGCACTGCTGCCATTCTGGGCACCCGAG...AGTCTTCTCTACCTTCCCTGCCAAAGGCTCAGAGGGTAAGACTGCAGTCAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR TCA 90 bp | TTCTTGACTGCAGTCTTACCCTCTGAGCCTTTGGCAGGGAAGGTAGAGAAGACTCCCCATCCCGGAAGTTaGGTATGGACCACAGGAAGG | + |
Preference number: 2 (lower is better) Translates to: FLTAVLPSEPLAGKVEKTPHPGS*VWTTGR Trigger: CCTTCCTGTGGTCCATACTCAACTTCCGGGATGGGG...AGTCTTCTCTACCTTCCCTGCCAAAGGCTCAGAGGGTAAGACTGCAGTCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR GCA 90 bp | ACATTGTCTCCCAAGAGTGCCACTATTAAATGGAGTGGCAGTGGCCAGTCCTGGGTGGGAAGAACACAGTaGAAGGGACAGGACTTGCCA | + |
Preference number: 2 (lower is better) Translates to: TLSPKSATIKWSGSGQSWVGRTQ*KGQDLP Trigger: TGGCAAGTCCTGTCCCTTGCACTGTGTTCTTCCCAC...CCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACTCTTGGGAGACAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR CCA 90 bp | ACATTGTCTCCCAAGAGTGCCACTATTAAATGGAGTGGCAGTGGCCAGTCCTGGGGACCTGGGCCTCTTTaGATCTGTGACCATCACAGA | + |
Preference number: 2 (lower is better) Translates to: TLSPKSATIKWSGSGQSWGPGPL*ICDHHR Trigger: TCTGTGATGGTCACAGATCCAAAGAGGCCCAGGTCC...CCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACTCTTGGGAGACAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR TCA 90 bp | AGGTTGGAAAAGCACAATGTGCACAATGTGCCGACTCACTCAACTCGGCCAGCAGCCTCTTTGGATCTGTaGCCATCACAGATCTGTCAG | + |
Preference number: 2 (lower is better) Translates to: RLEKHNVHNVPTHSTRPAASLDL*PSQICQ Trigger: CTGACAGATCTGTGATGGTCACAGATCCAAAGAGGC...TGCTGGCCGAGTTGAGTGAGTCGGCACATTGTGCACATTGTGCTTTTCCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR TCA 90 bp | AGGTTGGAAAAGCACAATGTGCACAATGTGCCGACTCACTCAACTCGGCCAGCATCTGCCGCTTTCACCTaGGAAGGTAAAAGTGCTGGA | + |
Preference number: 2 (lower is better) Translates to: RLEKHNVHNVPTHSTRPASAAFT*EGKSAG Trigger: TCCAGCACTTTTACCTTCTCAGGTGAAAGCGGCAGA...TGCTGGCCGAGTTGAGTGAGTCGGCACATTGTGCACATTGTGCTTTTCCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR TCA 90 bp | CCTGCTGTGGGGTTTGACAATAGCCACTCTTGGCCATCCAGCCTTCCAACACTGCGGATGTTCAGAAAATaGGACGTGTCCATACAATCG | + |
Preference number: 2 (lower is better) Translates to: PAVGFDNSHSWPSSLPTLRMFRK*DVSIQS Trigger: CGATTGTATGGACACGTCTCATTTTCTGAACATCCG...CAGTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR TCA 90 bp | ACATTGTCTCCCAAGAGTGCCACTATTAAATGGAGTGGCAGTGGCCAGTCCTGGCAAACCTTTTACCCCTaGAGTGGCTTCAGACACGTT | + |
Preference number: 2 (lower is better) Translates to: TLSPKSATIKWSGSGQSWQTFYP*SGFRHV Trigger: AACGTGTCTGAAGCCACTTCAGGGGTAAAAGGTTTG...CCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACTCTTGGGAGACAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR GCA 90 bp | TTCTTGACTGCAGTCTTACCCTCTGAGCCTTTGGCAGGGAAGGTAGAGAAGACTACCACACTATCCTCCTaGCAGCCACATCTTCTCCTT | + |
Preference number: 2 (lower is better) Translates to: FLTAVLPSEPLAGKVEKTTTLSS*QPHLLL Trigger: AAGGAGAAGATGTGGCTGGCAGGAGGATAGTGTGGT...AGTCTTCTCTACCTTCCCTGCCAAAGGCTCAGAGGGTAAGACTGCAGTCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR GCA 90 bp | ACATTGTCTCCCAAGAGTGCCACTATTAAATGGAGTGGCAGTGGCCAGTCCTGGCTAAACCAGCAGAAGTaGAGTGTGGGAAGAACACAG | + |
Preference number: 2 (lower is better) Translates to: TLSPKSATIKWSGSGQSWLNQQK*SVGRTQ Trigger: CTGTGTTCTTCCCACACTGCACTTCTGCTGGTTTAG...CCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACTCTTGGGAGACAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR CCA 90 bp | AAGAGATCTCCTCCAAACAGTACATGCAAATCCACAAGGTCACAAACAAGGCTAGTCCACGTACCTCACTaGCTGTCCCATCCCGGTGCT | + |
Preference number: 2 (lower is better) Translates to: KRSPPNSTCKSTRSQTRLVHVPH*LSHPGA Trigger: AGCACCGGGATGGGACAGCCAGTGAGGTACGTGGAC...TAGCCTTGTTTGTGACCTTGTGGATTTGCATGTACTGTTTGGAGGAGATCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR CCA 90 bp | ACATTGTCTCCCAAGAGTGCCACTATTAAATGGAGTGGCAGTGGCCAGTCCTGGTGGGAGGACGTGTCCTaGTGCAGATTCAAGTATTCT | + |
Preference number: 2 (lower is better) Translates to: TLSPKSATIKWSGSGQSWWEDVS*CRFKYS Trigger: AGAATACTTGAATCTGCACCAGGACACGTCCTCCCA...CCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACTCTTGGGAGACAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 90 bp | AGTTATGAAAGAGTTGGAACAGGTAGGCCTGGGTTACAATACGCCTaGCTCTTGCCCTCTCTGCCCCTTGACCTAGCCAATTCTTTAAGC | + |
Preference number: 2 (lower is better) Translates to: SYERVGTGRPGLQYA*LLPSLPLDLANSLS Trigger: GCTTAAAGAATTGGCTAGGTCAAGGGGCAGAGAGGGCAAGAGCAAGGCGTATTGTAACCCAGGCCTACCTGTTCCAACTCTTTCATAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR GCA 90 bp | AATTCACATACATGCAGGGACAAGAGAGTTAGGCCTTCATTTCTTCTAAGACTGCTCAGCCTCAGGGTGTaGATGTTAGGTGGGCAGGGC | + |
Preference number: 2 (lower is better) Translates to: NSHTCRDKRVRPSFLLRLLSLRV*MLGGQG Trigger: GCCCTGCCCACCTAACATGCACACCCTGAGGCTGAG...CAGTCTTAGAAGAAATGAAGGCCTAACTCTCTTGTCCCTGCATGTATGTGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR CCA 90 bp | ACACCACATGTCCCCAACAACTGCATGTCTTGCCATGTTTTCTCCACCCAAGAAGACAATAGCCACTCTTaGCCATCCAGCCTTCCAACA | + |
Preference number: 2 (lower is better) Translates to: TPHVPNNCMSCHVFSTQEDNSHS*PSSLPT Trigger: TGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTC...TTCTTGGGTGGAGAAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 90 bp | CATGGGTTCCTAATCTCCTACGAACGTCAGCATACACAGACAGCTTaGCTCCCTAGCGTTCTTCCACATGGAACCACATCAAAACCAAGT | + |
Preference number: 2 (lower is better) Translates to: HGFLISYERQHTQTA*LPSVLPHGTTSKPS Trigger: ACTTGGTTTTGATGTGGTTCCATGTGGAAGAACGCTAGGGAGCAAAGCTGTCTGTGTATGCTGACGTTCGTAGGAGATTAGGAACCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR GCA 90 bp | ACACCACATGTCCCCAACAACTGCATGTCTTGCCATGTTTTCTCCACCCAAGAAAACTACAAAGGACACTaGTCAGGTTGTGAACGGTCC | + |
Preference number: 2 (lower is better) Translates to: TPHVPNNCMSCHVFSTQENYKGH*SGCERS Trigger: GGACCGTTCACAACCTGAGCAGTGTCCTTTGTAGTT...TTCTTGGGTGGAGAAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR CCA 90 bp | AATTCACATACATGCAGGGACAAGAGAGTTAGGCCTTCATTTCTTCTAAGACTGTCCCGCGCCCTGCTGTaGGGTTTGACAATAGCCACT | + |
Preference number: 2 (lower is better) Translates to: NSHTCRDKRVRPSFLLRLSRALL*GLTIAT Trigger: AGTGGCTATTGTCAAACCCCACAGCAGGGCGCGGGA...CAGTCTTAGAAGAAATGAAGGCCTAACTCTCTTGTCCCTGCATGTATGTGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR TCA 90 bp | TGGGAAACTCAGTACTGCAAACAACACAAATTCAAGGTTCTTAAACGGCCCTCAAGCTGGGTCATCCTCTaGACATGGGAACATGCCAAC | + |
Preference number: 2 (lower is better) Translates to: WETQYCKQHKFKVLKRPSSWVIL*TWEHAN Trigger: GTTGGCATGTTCCCATGTTCAGAGGATGACCCAGCT...TGAGGGCCGTTTAAGAACCTTGAATTTGTGTTGTTTGCAGTACTGAGTTTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR CCA 90 bp | AAGAGATCTCCTCCAAACAGTACATGCAAATCCACAAGGTCACAAACAAGGCTAGGTGGTCATTCCAAGTaGGGCTCGGATACAGATGGA | + |
Preference number: 2 (lower is better) Translates to: KRSPPNSTCKSTRSQTRLGGHSK*GSDTDG Trigger: TCCATCTGTATCCGAGCCCCACTTGGAATGACCACC...TAGCCTTGTTTGTGACCTTGTGGATTTGCATGTACTGTTTGGAGGAGATCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR-3UTR TCA 90 bp | TGTCTCCACGAACACACCACATGTCCCCAACAACTGCATGTCTTGCCATGTTTTAAGAGAAAGAAAACTTaGTTAGAAGGACGGGCACGA | + |
Preference number: 2 (lower is better) Translates to: CLHEHTTCPQQLHVLPCFKRKKT*LEGRAR Trigger: TCGTGCCCGTCCTTCTAATCAAGTTTTCTTTCTCTT...AAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGTGTTCGTGGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR TCA 90 bp | AAGAGATCTCCTCCAAACAGTACATGCAAATCCACAAGGTCACAAACAAGGCTAAGGGCAGGAGACAAATaGTCACTGTTCTGGGAGTCA | + |
Preference number: 2 (lower is better) Translates to: KRSPPNSTCKSTRSQTRLRAGDK*SLFWES Trigger: TGACTCCCAGAACAGTGATCATTTGTCTCCTGCCCT...TAGCCTTGTTTGTGACCTTGTGGATTTGCATGTACTGTTTGGAGGAGATCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR TCA 90 bp | AATTCACATACATGCAGGGACAAGAGAGTTAGGCCTTCATTTCTTCTAAGACTGTGCCACTCTGTACCATaGGGCCAGCAAGAGGACAAA | + |
Preference number: 2 (lower is better) Translates to: NSHTCRDKRVRPSFLLRLCHSVP*GQQEDK Trigger: TTTGTCCTCTTGCTGGCCTCATGGTACAGAGTGGCA...CAGTCTTAGAAGAAATGAAGGCCTAACTCTCTTGTCCCTGCATGTATGTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR TCA 90 bp | AATTCACATACATGCAGGGACAAGAGAGTTAGGCCTTCATTTCTTCTAAGACTGATCGAAGTGTGGGTTTaGGCGTGCCACTCTGTACCA | + |
Preference number: 2 (lower is better) Translates to: NSHTCRDKRVRPSFLLRLIEVWV*ACHSVP Trigger: TGGTACAGAGTGGCACGCTCAAACCCACACTTCGAT...CAGTCTTAGAAGAAATGAAGGCCTAACTCTCTTGTCCCTGCATGTATGTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR TCA 90 bp | TGGGAAACTCAGTACTGCAAACAACACAAATTCAAGGTTCTTAAACGGCCCTCAAGCAGAAACCCCATCTaGATGCTTCTTTCTTCCGCC | + |
Preference number: 2 (lower is better) Translates to: WETQYCKQHKFKVLKRPSSRNPI*MLLSSA Trigger: GGCGGAAGAAAGAAGCATTCAGATGGGGTTTCTGCT...TGAGGGCCGTTTAAGAACCTTGAATTTGTGTTGTTTGCAGTACTGAGTTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR GCA 90 bp | ACACTGATGCTATTGTCTTTCAGAGACGATGTCTACATAAACATTGATAGGTCATCTCCTCGGCAGCCCTaGCACCCACTTCTGGGTTAT | + |
Preference number: 2 (lower is better) Translates to: TLMLLSFRDDVYINIDRSSPRQP*HPLLGY Trigger: ATAACCCAGAAGTGGGTGGCAGGGCTGCCGAGGAGA...TGACCTATCAATGTTTATGTAGACATCGTCTCTGAAAGACAATAGCATCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR TCA 90 bp | TGTCTCCACGAACACACCACATGTCCCCAACAACTGCATGTCTTGCCATGTTTTGTTCACACAAAAATCTaGCGTGCTAAGAGAAAGAAA | + |
Preference number: 2 (lower is better) Translates to: CLHEHTTCPQQLHVLPCFVHTKI*RAKRKK Trigger: TTTCTTTCTCTTAGCACGTCAGATTTTTGTGTGAAC...AAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGTGTTCGTGGAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR CCA 90 bp | TGGGAAACTCAGTACTGCAAACAACACAAATTCAAGGTTCTTAAACGGCCCTCAAAGGGGACAGGGTTCTaGAACTTGCTAAATCAGTTC | + |
Preference number: 2 (lower is better) Translates to: WETQYCKQHKFKVLKRPSKGTGF*NLLNQF Trigger: GAACTGATTTAGCAAGTTCCAGAACCCTGTCCCCTT...TGAGGGCCGTTTAAGAACCTTGAATTTGTGTTGTTTGCAGTACTGAGTTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CAA 90 bp | CTCTCAAGTCTCTTAGGCCCTAAGACACCACCACATTATCATTTATaGGTATTCATGGTCTCAATGGGTCTCAGGATCATTTCTTTCAGC | + |
Preference number: 2 (lower is better) Translates to: LSSLLGPKTPPHYHL*VFMVSMGLRIISFS Trigger: GCTGAAAGAAATGATCCTGAGACCCATTGAGACCATGAATACCAATAAATGATAATGTGGTGGTGTCTTAGGGCCTAAGAGACTTGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR GCA 90 bp | ACACTGATGCTATTGTCTTTCAGAGACGATGTCTACATAAACATTGATAGGTCAGAAGTTCTCAGAGAGTaGTCAGAGGGTAGTCCATCC | + |
Preference number: 2 (lower is better) Translates to: TLMLLSFRDDVYINIDRSEVLRE*SEGSPS Trigger: GGATGGACTACCCTCTGAGCACTCTCTGAGAACTTC...TGACCTATCAATGTTTATGTAGACATCGTCTCTGAAAGACAATAGCATCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR GCA 90 bp | ACACTGATGCTATTGTCTTTCAGAGACGATGTCTACATAAACATTGATAGGTCAATCAAACGCTATCTATaGCAACCCACTGCTGCCGCT | + |
Preference number: 2 (lower is better) Translates to: TLMLLSFRDDVYINIDRSIKRYL*QPTAAA Trigger: AGCGGCAGCAGTGGGTTGGCATAGATAGCGTTTGAT...TGACCTATCAATGTTTATGTAGACATCGTCTCTGAAAGACAATAGCATCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR GCA 90 bp | AAGAGATCTCCTCCAAACAGTACATGCAAATCCACAAGGTCACAAACAAGGCTAAAGAATTCACATACATaGAGGGACAAGAGAGTTAGG | + |
Preference number: 2 (lower is better) Translates to: KRSPPNSTCKSTRSQTRLKNSHT*RDKRVR Trigger: CCTAACTCTCTTGTCCCTGCATGTATGTGAATTCTT...TAGCCTTGTTTGTGACCTTGTGGATTTGCATGTACTGTTTGGAGGAGATCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CAA 90 bp | ACATGGTTGAAACTTGTGAAAAATGAGACCACTTTCTTCTCACTGTaGGTGAGCAACAGTTCTTCCAGTCTAACAAACAGTCAAACAGTG | + |
Preference number: 2 (lower is better) Translates to: TWLKLVKNETTFFSL*VSNSSSSLTNSQTV Trigger: CACTGTTTGACTGTTTGTTAGACTGGAAGAACTGTTGCTCACCAACAGTGAGAAGAAAGTGGTCTCATTTTTCACAAGTTTCAACCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR GCA 90 bp | AATTCACATACATGCAGGGACAAGAGAGTTAGGCCTTCATTTCTTCTAAGACTGATTCTGTCACTAAGATaGAAATTGCTCTCAAGTCTC | + |
Preference number: 2 (lower is better) Translates to: NSHTCRDKRVRPSFLLRLILSLR*KLLSSL Trigger: GAGACTTGAGAGCAATTTGCATCTTAGTGACAGAAT...CAGTCTTAGAAGAAATGAAGGCCTAACTCTCTTGTCCCTGCATGTATGTGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR CCA 90 bp | AATTCACATACATGCAGGGACAAGAGAGTTAGGCCTTCATTTCTTCTAAGACTGAGGACAAAATTCAGCTaGTTCACACAAAAATCTGAC | + |
Preference number: 2 (lower is better) Translates to: NSHTCRDKRVRPSFLLRLRTKFS*FTQKSD Trigger: GTCAGATTTTTGTGTGAACCAGCTGAATTTTGTCCT...CAGTCTTAGAAGAAATGAAGGCCTAACTCTCTTGTCCCTGCATGTATGTGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CAA 90 bp | AACCAAGATATAAATATTACAATGATTCTGTCACTAAGATGCAAATaGCTCTCAAGTCTCTTAGGCCCTAAGACACCACCACATTATCAT | + |
Preference number: 2 (lower is better) Translates to: NQDINITMILSLRCK*LSSLLGPKTPPHYH Trigger: ATGATAATGTGGTGGTGTCTTAGGGCCTAAGAGACTTGAGAGCAATTTGCATCTTAGTGACAGAATCATTGTAATATTTATATCTTGGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | GAAGGCAGCGTCCGGCAGCATCGGGCAGGCCCGCCCTaGCCTGCCCTGGGCTGGGGTGACCATGAGTCGTCC | + |
Preference number: 3 (lower is better) Translates to: EGSVRQHRAGPP*PALGWGDHESS Trigger: GGACGACTCATGGTCACCCCAGCCCAGGGCAGGGCAGGGCGGGCCTGCCCGATGCTGCCGGACGCTGCCTTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | CAACACTGCTCTTCCCTGACCGATGCAGAGCCGCGGTaGACGGGGAGCACCTCCTCAGCTCTCCTCGGCAGC | + |
Preference number: 3 (lower is better) Translates to: QHCSSLTDAEPR*TGSTSSALLGS Trigger: GCTGCCGAGGAGAGCTGAGGAGGTGCTCCCCGTGCACCGCGGCTCTGCATCGGTCAGGGAAGAGCAGTGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | CTCTTGGCCATCCAGCCTTCCAACACTGCTCTTCCCTaGCCGATGCAGAGCCGCGGTGCACGGGGAGCACCT | + |
Preference number: 3 (lower is better) Translates to: LLAIQPSNTALP*PMQSRGARGAP Trigger: AGGTGCTCCCCGTGCACCGCGGCTCTGCATCGGTCAGGGAAGAGCAGTGTTGGAAGGCTGGATGGCCAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | CTGGCTTTCCCTAGCCCTCCACAGCACAGGACCTACTaGACTCAGGCTACCCAGAAACCCACCAGCGGCAGC | + |
Preference number: 3 (lower is better) Translates to: LAFPSPPQHRTY*TQATQKPTSGS Trigger: GCTGCCGCTGGTGGGTTTCTGGGTAGCCTGAGTGCAGTAGGTCCTGTGCTGTGGAGGGCTAGGGAAAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | AGACACTCGGGTGCCCAGAATGGCAGCAGTGCCCCGTaGAACATCCGTGGGAGGACGTGTCCTGGTGCAGAT | + |
Preference number: 3 (lower is better) Translates to: RHSGAQNGSSAP*NIRGRTCPGAD Trigger: ATCTGCACCAGGACACGTCCTCCCACGGATGTTCCACGGGGCACTGCTGCCATTCTGGGCACCCGAGTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CAGGGTCCAGCCTGGGGGTCAGGGGAGGTCCATCCATaGCGACAATGTCAGATGGGCCCAGATGGGAAACTC | + |
Preference number: 3 (lower is better) Translates to: QGPAWGSGEVHP*RQCQMGPDGKL Trigger: GAGTTTCCCATCTGGGCCCATCTGACATTGTCGCCATGGATGGACCTCCCCTGACCCCCAGGCTGGACCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | AGTACTCCCCCACCCTGTCCCCAATCAGACACAGGCTaGCCCTATTTCCTGTGGACTCCCGCGCCCTGCTGT | + |
Preference number: 3 (lower is better) Translates to: STPPPCPQSDTG*PYFLWTPAPCC Trigger: ACAGCAGGGCGCGGGAGTCCACAGGAAATAGGGTCAGCCTGTGTCTGATTGGGGACAGGGTGGGGGAGTACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | TCTATCCTAGGAGACAGGGCAGACAACAGCCGGGACTaGCTGGCTAGGGTGGGAGGGCCAGGAGCCAAATGC | + |
Preference number: 3 (lower is better) Translates to: SILGDRADNSRD*LARVGGPGAKC Trigger: GCATTTGGCTCCTGGCCCTCCCACCCTAGCCAGTCAGTCCCGGCTGTTGTCTGCCCTGTCTCCTAGGATAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | GGCAAATGCCATCCATGGCTCCCACATCATTTGCAGTaGACAGGGTCCAGCCTGGGGGTCAGGGGAGGTCCA | + |
Preference number: 3 (lower is better) Translates to: GKCHPWLPHHLQ*TGSSLGVRGGP Trigger: TGGACCTCCCCTGACCCCCAGGCTGGACCCTGTGCACTGCAAATGATGTGGGAGCCATGGATGGCATTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | GGCTCCCACATCATTTGCAGTGCACAGGGTCCAGCCTaGGGGTCAGGGGAGGTCCATCCATGGCGACAATGT | + |
Preference number: 3 (lower is better) Translates to: GSHIICSAQGPA*GSGEVHPWRQC Trigger: ACATTGTCGCCATGGATGGACCTCCCCTGACCCCCAGGCTGGACCCTGTGCACTGCAAATGATGTGGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR GCA 72 bp | ACAATAGCCACTCTTGGCCATCCAGCCTTCCAACACTaGTCTTCCCTGACCGATGCAGAGCCGCGGTGCACG | + |
Preference number: 3 (lower is better) Translates to: TIATLGHPAFQH*SSLTDAEPRCT Trigger: CGTGCACCGCGGCTCTGCATCGGTCAGGGAAGAGCAGTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CCGCGCCCTGCTGTGGGGTTTGACAATAGCCACTCTTaGCCATCCAGCCTTCCAACACTGCTCTTCCCTGAC | + |
Preference number: 3 (lower is better) Translates to: PRPAVGFDNSHS*PSSLPTLLFPD Trigger: GTCAGGGAAGAGCAGTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGGGCGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CTGACCCTATTTCCTGTGGACTCCCGCGCCCTGCTGTaGGGTTTGACAATAGCCACTCTTGGCCATCCAGCC | + |
Preference number: 3 (lower is better) Translates to: LTLFPVDSRALL*GLTIATLGHPA Trigger: GGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGGGCGCGGGAGTCCACAGGAAATAGGGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CCACCAGCGGCAGCCACAGTGTCACCTAAATCCAAGTaGGGCAAATCCCAGAGCAAGTCTGGGGTGCTGCCA | + |
Preference number: 3 (lower is better) Translates to: PPAAATVSPKSK*GKSQSKSGVLP Trigger: TGGCAGCACCCCAGACTTGCTCTGGGATTTGCCCCACTTGGATTTAGGTGACACTGTGGCTGCCGCTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | TACAAGGATGGACACAAGTCTCCACGCTCCTCCGACTaGCCCACAGAGACTCTGACATGGGCGGGGACGAAT | + |
Preference number: 3 (lower is better) Translates to: YKDGHKSPRSSD*PTETLTWAGTN Trigger: ATTCGTCCCCGCCCATGTCAGAGTCTCTGTGGGTCAGTCGGAGGAGCGTGGAGACTTGTGTCCATCCTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | CCAAGTGGGGCAAATCCCAGAGCAAGTCTGGGGTGCTaGCAGGACACAGCGGCACTTAGCCTATCTATCCTA | + |
Preference number: 3 (lower is better) Translates to: PSGANPRASLGC*QDTAALSLSIL Trigger: TAGGATAGATAGGCTAAGTGCCGCTGTGTCCTGGCAGCACCCCAGACTTGCTCTGGGATTTGCCCCACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | TGCCCAGAATGGCAGCAGTGCCCCGTGGAACATCCGTaGGAGGACGTGTCCTGGTGCAGATTCAAGTATTCT | + |
Preference number: 3 (lower is better) Translates to: CPEWQQCPVEHP*EDVSWCRFKYS Trigger: AGAATACTTGAATCTGCACCAGGACACGTCCTCCCACGGATGTTCCACGGGGCACTGCTGCCATTCTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CTTTTGATCATAGAGAAGACACTCGGGTGCCCAGAATaGCAGCAGTGCCCCGTGGAACATCCGTGGGAGGAC | + |
Preference number: 3 (lower is better) Translates to: LLIIEKTLGCPE*QQCPVEHPWED Trigger: GTCCTCCCACGGATGTTCCACGGGGCACTGCTGCCATTCTGGGCACCCGAGTGTCTTCTCTATGATCAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | ACCCAAGGTCAGAGGACCTGGGCCTCTTTGGATCTGTaGCCATCACAGATCTGTCAGTCACTGGGCCACTCT | + |
Preference number: 3 (lower is better) Translates to: TQGQRTWASLDL*PSQICQSLGHS Trigger: AGAGTGGCCCAGTGACTGACAGATCTGTGATGGTCACAGATCCAAAGAGGCCCAGGTCCTCTGACCTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | CTCTCCTCGGCAGCCCTGCCACCCACTTCTGGGTTATaGACTACAAAGGACACTGCTCAGGTTGTGAACGGT | + |
Preference number: 3 (lower is better) Translates to: LSSAALPPTSGL*TTKDTAQVVNG Trigger: ACCGTTCACAACCTGAGCAGTGTCCTTTGTAGTTCATAACCCAGAAGTGGGTGGCAGGGCTGCCGAGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | AAGCCCAGAAAAGGGGTCTGCTACGTCAGCATCACCTaGGGCAGCCTGTCACCTGCTCTAGTCCTTTCAGGA | + |
Preference number: 3 (lower is better) Translates to: KPRKGVCYVSIT*GSLSPALVLSG Trigger: TCCTGAAAGGACTAGAGCAGGTGACAGGCTGCCTCAGGTGATGCTGACGTAGCAGACCCCTTTTCTGGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | AAGGAAAGTGGAGAGGCTGAGGGCAGGGTGAGGCTTTaGCTGCTGTCTAGCAAATCAACGGGGCAAATGCCA | + |
Preference number: 3 (lower is better) Translates to: KESGEAEGRVRL*LLSSKSTGQMP Trigger: TGGCATTTGCCCCGTTGATTTGCTAGACAGCAGGCAAAGCCTCACCCTGCCCTCAGCCTCTCCACTTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | AGGAAAACAGAACGGTGGCTAGGTTATCCTGTGCCCTaGCTTTCCCTAGCCCTCCACAGCACAGGACCTACT | + |
Preference number: 3 (lower is better) Translates to: RKTERWLGYPVP*LSLALHSTGPT Trigger: AGTAGGTCCTGTGCTGTGGAGGGCTAGGGAAAGCCAGGGCACAGGATAACCTAGCCACCGTTCTGTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | CTGGCTGTAAAGGTGAGGGGCCTGTTCATCACGCTATaGGAGCATGTACAAGCCACTTCTGGCTCTACGGGA | + |
Preference number: 3 (lower is better) Translates to: LAVKVRGLFITL*EHVQATSGSTG Trigger: TCCCGTAGAGCCAGAAGTGGCTTGTACATGCTCTCATAGCGTGATGAACAGGCCCCTCACCTTTACAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | CCACACACAACGGGCTCAGGTTGGAAAAGCACAATGTaGACAATGTGCCGACTCACTCAACTCGGCCAGCAA | + |
Preference number: 3 (lower is better) Translates to: PHTTGSGWKSTM*TMCRLTQLGQQ Trigger: TTGCTGGCCGAGTTGAGTGAGTCGGCACATTGTGCACATTGTGCTTTTCCAACCTGAGCCCGTTGTGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | GGCTTTGCCTGCTGTCTAGCAAATCAACGGGGCAAATaGCATCCATGGCTCCCACATCATTTGCAGTGCACA | + |
Preference number: 3 (lower is better) Translates to: GFACCLANQRGK*HPWLPHHLQCT Trigger: TGTGCACTGCAAATGATGTGGGAGCCATGGATGGCATTTGCCCCGTTGATTTGCTAGACAGCAGGCAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | GCCACCCACTTCTGGGTTATGAACTACAAAGGACACTaGTCAGGTTGTGAACGGTCCTTAGGACATAGTGGG | + |
Preference number: 3 (lower is better) Translates to: ATHFWVMNYKGH*SGCERSLGHSG Trigger: CCCACTATGTCCTAAGGACCGTTCACAACCTGAGCAGTGTCCTTTGTAGTTCATAACCCAGAAGTGGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | GAGCCTTTGGCAGGGAAGGTAGAGAAGACTGGTACCTaGCATTCAGTCGAGATCAACAGGGCCAAAATACAC | + |
Preference number: 3 (lower is better) Translates to: EPLAGKVEKTGT*HSVEINRAKIH Trigger: GTGTATTTTGGCCCTGTTGATCTCGACTGAATGCCAGGTACCAGTCTTCTCTACCTTCCCTGCCAAAGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | AATCATGAAATTCTCTCCAGAAGCATCCAGCCAGGGTaGAGGACAAGGCATACCAGGTCTGCCCGTAAGTCT | + |
Preference number: 3 (lower is better) Translates to: NHEILSRSIQPG*RTRHTRSARKS Trigger: AGACTTACGGGCAGACCTGGTATGCCTTGTCCTCCACCCTGGCTGGATGCTTCTGGAGAGAATTTCATGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | CACACTATCCTCCTGCCAGCCACATCTTCTCCTTGGTaGGGCGACCCACAAAATCTTAGAGCTACAAGATCT | + |
Preference number: 3 (lower is better) Translates to: HTILLPATSSPW*GDPQNLRATRS Trigger: AGATCTTGTAGCTCTAAGATTTTGTGGGTCGCCTCACCAAGGAGAAGATGTGGCTGGCAGGAGGATAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | TTGAAGGGACTTGGGAAAGCGAGCAGAAACCCCATCTaGATGCTTCTTTCTTCCGCCTCACTTCAAAGGTGG | + |
Preference number: 3 (lower is better) Translates to: LKGLGKASRNPI*MLLSSASLQRW Trigger: CCACCTTTGAAGTGAGGCGGAAGAAAGAAGCATTCAGATGGGGTTTCTGCTCGCTTTCCCAAGTCCCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | GACACTAGCTTTTCCTATCCCTGTACCATACAAGCCTaGCAAGGAAGTTACAGGGACACACCCTTTCGTCAG | + |
Preference number: 3 (lower is better) Translates to: DTSFSYPCTIQA*QGSYRDTPFRQ Trigger: CTGACGAAAGGGTGTGTCCCTGTAACTTCCTTGCCAGGCTTGTATGGTACAGGGATAGGAAAAGCTAGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR CAA 90 bp | TTCTTGACTGCAGTCTTACCCTCTGAGCCTTTGGCAGGGAAGGTAGAGAAGACTGGATTATACTGGATATaGGTTTTAGGGAGCCAGCCC | + |
Preference number: 3 (lower is better) Translates to: FLTAVLPSEPLAGKVEKTGLYWI*VLGSQP Trigger: GGGCTGGCTCCCTAAAACCAATATCCAGTATAATCC...AGTCTTCTCTACCTTCCCTGCCAAAGGCTCAGAGGGTAAGACTGCAGTCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR CAA 90 bp | TGGGAAACTCAGTACTGCAAACAACACAAATTCAAGGTTCTTAAACGGCCCTCATGCAAGGGACAGGACTaGCCAGAGGGGGTCGTTTTG | + |
Preference number: 3 (lower is better) Translates to: WETQYCKQHKFKVLKRPSCKGQD*PEGVVL Trigger: CAAAACGACCCCCTCTGGCAAGTCCTGTCCCTTGCA...TGAGGGCCGTTTAAGAACCTTGAATTTGTGTTGTTTGCAGTACTGAGTTTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | GTACCTTTACTCAGCAATGGCTCAGTGAGTTTTTCCTaGCCAGACAACTCCATGGTGCAGGGTCAGGAAAAC | + |
Preference number: 3 (lower is better) Translates to: VPLLSNGSVSFS*PDNSMVQGQEN Trigger: GTTTTCCTGACCCTGCACCATGGAGTTGTCTGGTCAGGAAAAACTCACTGAGCCATTGCTGAGTAAAGGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | ACGAACACACCACATGTCCCCAACAACTGCATGTCTTaGCATGTTTTCTCCACCCAAGAAAGTGAAGCCATC | + |
Preference number: 3 (lower is better) Translates to: TNTPHVPNNCMS*HVFSTQESEAI Trigger: GATGGCTTCACTTTCTTGGGTGGAGAAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGTGTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | CATGTCTCCACGAACACACCACATGTCCCCAACAACTaGATGTCTTGCCATGTTTTCTCCACCCAAGAAAGT | + |
Preference number: 3 (lower is better) Translates to: HVSTNTPHVPNN*MSCHVFSTQES Trigger: ACTTTCTTGGGTGGAGAAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGTGTTCGTGGAGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | TCCGAAGACAAGTTAATATCCATCAAGACTACCAAGTaGCAGAGGGTGTCAACCCCATGTCTCCACGAACAC | + |
Preference number: 3 (lower is better) Translates to: SEDKLISIKTTK*QRVSTPCLHEH Trigger: GTGTTCGTGGAGACATGGGGTTGACACCCTCTGGCACTTGGTAGTCTTGATGGATATTAACTTGTCTTCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | ATGCCAACCTGGAACTGCAGCAGAACTGGATTATACTaGATATTGGTTTTAGGGAGCCAGCCCCTAGTACTC | + |
Preference number: 3 (lower is better) Translates to: MPTWNCSRTGLY*ILVLGSQPLVL Trigger: GAGTACTAGGGGCTGGCTCCCTAAAACCAATATCCAGTATAATCCAGTTCTGCTGCAGTTCCAGGTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | ACATGGGAACATGCCAACCTGGAACTGCAGCAGAACTaGATTATACTGGATATTGGTTTTAGGGAGCCAGCC | + |
Preference number: 3 (lower is better) Translates to: TWEHANLELQQN*IILDIGFREPA Trigger: GGCTGGCTCCCTAAAACCAATATCCAGTATAATCCAGTTCTGCTGCAGTTCCAGGTTGGCATGTTCCCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | GCGCTCACTAGACCCAGCAAGCAGGAAGGTGGCACATaGTTGAAACTTGTGAAAAATGAGACCACTTTCTTC | + |
Preference number: 3 (lower is better) Translates to: ALTRPSKQEGGT*LKLVKNETTFF Trigger: GAAGAAAGTGGTCTCATTTTTCACAAGTTTCAACCATGTGCCACCTTCCTGCTTGCTGGGTCTAGTGAGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | TTCCTACCTCAGAGGAGCCGTACCTTTACTCAGCAATaGCTCAGTGAGTTTTTCCTGACCAGACAACTCCAT | + |
Preference number: 3 (lower is better) Translates to: FLPQRSRTFTQQ*LSEFFLTRQLH Trigger: ATGGAGTTGTCTGGTCAGGAAAAACTCACTGAGCCATTGCTGAGTAAAGGTACGGCTCCTCTGAGGTAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CTATTAACATTGTCTCCCAAGAGTGCCACTATTAAATaGAGTGGCAGTGGCCAGTCCTGGCAGAAAGCTGTC | + |
Preference number: 3 (lower is better) Translates to: LLTLSPKSATIK*SGSGQSWQKAV Trigger: GACAGCTTTCTGCCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACTCTTGGGAGACAATGTTAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | GGTCCATCCATGGCGACAATGTCAGATGGGCCCAGATaGGAAACTCAGTACTGCAAACAACACAAATTCAAG | + |
Preference number: 3 (lower is better) Translates to: GPSMATMSDGPR*ETQYCKQHKFK Trigger: CTTGAATTTGTGTTGTTTGCAGTACTGAGTTTCCCATCTGGGCCCATCTGACATTGTCGCCATGGATGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | AAGGCCTCCTTTCATCACAGGATAAAACGGGTTTATTaGAGGGACTTGGGAAAGCGAGCAGAAACCCCATCT | + |
Preference number: 3 (lower is better) Translates to: KASFHHRIKRVY*RDLGKRAETPS Trigger: AGATGGGGTTTCTGCTCGCTTTCCCAAGTCCCTTCAATAAACCCGTTTTATCCTGTGATGAAAGGAGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | GCTATCCCAGCATTTAGGAGGAAGAAACAGGGGGATTaGTATAAGTTAGAGGTCAGACAGGACTACCTAGCA | + |
Preference number: 3 (lower is better) Translates to: AIPAFRRKKQGD*YKLEVRQDYLA Trigger: TGCTAGGTAGTCCTGTCTGACCTCTAACTTATAGCAATCCCCCTGTTTCTTCCTCCTAAATGCTGGGATAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CTTTGGATCTGTGACCATCACAGATCTGTCAGTCACTaGGCCACTCTAGGCAACCTTTCCCAAAGTGAATTT | + |
Preference number: 3 (lower is better) Translates to: LWICDHHRSVSH*ATLGNLSQSEF Trigger: AAATTCACTTTGGGAAAGGTTGCCTAGAGTGGCCCAGTGACTGACAGATCTGTGATGGTCACAGATCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CTCACGTACAATGCTCCAAACCTAAGCAAGCGGCACTaGTCCACAGGGGGCTTAATAAACACAAAAATATGC | + |
Preference number: 3 (lower is better) Translates to: LTYNAPNLSKRH*STGGLINTKIC Trigger: GCATATTTTTGTGTTTATTAAGCCCCCTGTGGACCAGTGCCGCTTGCTTAGGTTTGGAGCATTGTACGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | AGTGGCAGTGGCCAGTCCTGGCAGAAAGCTGTCATTTaGCCACATAATAACTTGTGTTGTCACAGAATTACG | + |
Preference number: 3 (lower is better) Translates to: SGSGQSWQKAVI*PHNNLCCHRIT Trigger: CGTAATTCTGTGACAACACAAGTTATTATGTGGCCAAATGACAGCTTTCTGCCAGGACTGGCCACTGCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | AGTGCCACTATTAAATGGAGTGGCAGTGGCCAGTCCTaGCAGAAAGCTGTCATTTGGCCACATAATAACTTG | + |
Preference number: 3 (lower is better) Translates to: SATIKWSGSGQS*QKAVIWPHNNL Trigger: CAAGTTATTATGTGGCCAAATGACAGCTTTCTGCCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | AACCTATGGTCTAAATTTGATTCTGTGAGATGGCTTTaGACTCAATGGGCTTGGGTCCCTCCACCCCTTTAC | + |
Preference number: 3 (lower is better) Translates to: NLWSKFDSVRWL*TQWAWVPPPLY Trigger: GTAAAGGGGTGGAGGGACCCAAGCCCATTGAGTTCAAAGCCATCTCACAGAATCAAATTTAGACCATAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | GCTATTCTGACGAACAAGGAGGGGCCAGGTACTTCCTaGTGGGTACCAGATGCAATTATGAAAGAAAACAAA | + |
Preference number: 3 (lower is better) Translates to: AILTNKEGPGTS*WVPDAIMKENK Trigger: TTTGTTTTCTTTCATAATTGCATCTGGTACCCAGCAGGAAGTACCTGGCCCCTCCTTGTTCGTCAGAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR CAA 90 bp | TGTCTCCACGAACACACCACATGTCCCCAACAACTGCATGTCTTGCCATGTTTTTTTCAATTCACAGGGTaGCTGTACAAACCTCAAATC | + |
Preference number: 3 (lower is better) Translates to: CLHEHTTCPQQLHVLPCFFQFTG*LYKPQI Trigger: GATTTGAGGTTTGTACAGCAACCCTGTGAATTGAAA...AAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGTGTTCGTGGAGACA 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | CACTGTTCAAGAACCTATGGTCTAAATTTGATTCTGTaGGATGGCTTTGAACTCAATGGGCTTGGGTCCCTC | + |
Preference number: 3 (lower is better) Translates to: HCSRTYGLNLIL*DGFELNGLGSL Trigger: GAGGGACCCAAGCCCATTGAGTTCAAAGCCATCTCACAGAATCAAATTTAGACCATAGGTTCTTGAACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | TTAACTAAATGTACATCCCCGCCCCAATTCCATGATTaGCAAGAGTGCTTATGTGACACATGGAAGGCACCA | + |
Preference number: 3 (lower is better) Translates to: LTKCTSPPQFHD*QECLCDTWKAP Trigger: TGGTGCCTTCCATGTGTCACATAAGCACTCTTGTCAATCATGGAATTGGGGCGGGGATGTACATTTAGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR CAA 90 bp | AAGAGATCTCCTCCAAACAGTACATGCAAATCCACAAGGTCACAAACAAGGCTATCTATTACCTTCTGTTaGCACAGAGGCACAACAGGA | + |
Preference number: 3 (lower is better) Translates to: KRSPPNSTCKSTRSQTRLSITFC*HRGTTG Trigger: TCCTGTTGTGCCTCTGTGCAAACAGAAGGTAATAGA...TAGCCTTGTTTGTGACCTTGTGGATTTGCATGTACTGTTTGGAGGAGATCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | TCATCCTCTGAACATGGGAACATGCCAACCTGGAACTaGAGCAGAACTGGATTATACTGGATATTGGTTTTA | + |
Preference number: 3 (lower is better) Translates to: SSSEHGNMPTWN*SRTGLYWILVL Trigger: TAAAACCAATATCCAGTATAATCCAGTTCTGCTGCAGTTCCAGGTTGGCATGTTCCCATGTTCAGAGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | GTTGCTGTACAAACCTCAAATCTATTACCTTCTGTTTaGACAGAGGCACAACAGGAAAGATACAGGTGTCTC | + |
Preference number: 3 (lower is better) Translates to: VAVQTSNLLPSV*TEAQQERYRCL Trigger: GAGACACCTGTATCTTTCCTGTTGTGCCTCTGTGCAAACAGAAGGTAATAGATTTGAGGTTTGTACAGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CACCACATTATCATTTATTGGTATTCATGGTCTCAATaGGTCTCAGGATCATTTCTTTCAGCCGACAACACT | + |
Preference number: 3 (lower is better) Translates to: HHIIIYWYSWSQ*VSGSFLSADNT Trigger: AGTGTTGTCGGCTGAAAGAAATGATCCTGAGACCCATTGAGACCATGAATACCAATAAATGATAATGTGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CCA 72 bp | CTAAGACACCACCACATTATCATTTATTGGTATTCATaGTCTCAATGGGTCTCAGGATCATTTCTTTCAGCC | + |
Preference number: 3 (lower is better) Translates to: LRHHHIIIYWYS*SQWVSGSFLSA Trigger: GGCTGAAAGAAATGATCCTGAGACCCATTGAGACCATGAATACCAATAAATGATAATGTGGTGGTGTCTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR TCA 72 bp | ATGGAGTCTTTGCAACCCCATTTAAAGGGAATTCTCTaGGGCAGAAAGCCTGATTTTGATTATATAGGTATA | + |
Preference number: 3 (lower is better) Translates to: MESLQPHLKGIL*GRKPDFDYIGI Trigger: TATACCTATATAATCAAAATCAGGCTTTCTGCCTCAGAGAATTCCCTTTAAATGGGGTTGCAAAGACTCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR-3UTR CAA 90 bp | ACACTGATGCTATTGTCTTTCAGAGACGATGTCTACATAAACATTGATAGGTCATACTGCATTCTTGCTTaGTCTGTAGACAAAAGCAAT | + |
Preference number: 3 (lower is better) Translates to: TLMLLSFRDDVYINIDRSYCILA*SVDKSN Trigger: ATTGCTTTTGTCTACAGACAAAGCAAGAATGCAGTA...TGACCTATCAATGTTTATGTAGACATCGTCTCTGAAAGACAATAGCATCAGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR GCA 72 bp | CAAGATATAAATATTACAATGATTCTGTCACTAAGATaGAAATTGCTCTCAAGTCTCTTAGGCCCTAAGACA | + |
Preference number: 3 (lower is better) Translates to: QDINITMILSLR*KLLSSLLGPKT Trigger: TGTCTTAGGGCCTAAGAGACTTGAGAGCAATTTGCATCTTAGTGACAGAATCATTGTAATATTTATATCTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CCA 90 bp | TGTCCATACAATCGAAGTGTGGGTTTGAGCGTGCCACTCTGTACCATGAGGCCAGGCTCGGTGGTGGGTTaGTACGGGCTGCTGGCGCCC | + |
Preference number: 4 (lower is better) Translates to: CPYNRSVGLSVPLCTMRPGSVVG*YGLLAP Trigger: GGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCC...TGGCCTCATGGTACAGAGTGGCACGCTCAAACCCACACTTCGATTGTATGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR CCA 90 bp | GCCACTCTTGGCCATCCAGCCTTCCAACACTGCTCTTCCCTGACCGATGCAGAGAAGGCCAGAATCACTTaGGCGACCTTGAGGCGGCCG | + |
Preference number: 4 (lower is better) Translates to: ATLGHPAFQHCSSLTDAEKARIT*ATLRRP Trigger: CGGCCGCCTCAAGGTCGCCCAAGTGATTCTGGCCTT...CTCTGCATCGGTCAGGGAAGAGCAGTGTTGGAAGGCTGGATGGCCAAGAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR GCA 90 bp | CCTGCTGTGGGGTTTGACAATAGCCACTCTTGGCCATCCAGCCTTCCAACACTGCCGAGATCATGGAGGTaGTCGAGGCCTCGCCCTCGA | + |
Preference number: 4 (lower is better) Translates to: PAVGFDNSHSWPSSLPTLPRSWR*SRPRPR Trigger: TCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGG...CAGTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CCA 90 bp | ACATTGTCTCCCAAGAGTGCCACTATTAAATGGAGTGGCAGTGGCCAGTCCTGGTCACCGGCTCGGTGGTaGGTTGGTACGGGCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: TLSPKSATIKWSGSGQSWSPARW*VGTGCW Trigger: CCAGCAGCCCGTACCAACCCACCACCGAGCCGGTGA...CCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACTCTTGGGAGACAATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 72 bp | CTATTTCCTGTGGACTCCCGCGCCCTGCTGTGGGGTTaGACAATAGCCACTCTTGGCCATCCAGCCTTCCAA | + |
Preference number: 4 (lower is better) Translates to: LFPVDSRALLWG*TIATLGHPAFQ Trigger: TTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGGGCGCGGGAGTCCACAGGAAATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR GCA 90 bp | GCCACTCTTGGCCATCCAGCCTTCCAACACTGCTCTTCCCTGACCGATGCAGAGCTGACTCTCCATTTCTaGATGGCCAGGAATGTGCTC | + |
Preference number: 4 (lower is better) Translates to: ATLGHPAFQHCSSLTDAELTLHF*MARNVL Trigger: GAGCACATTCCTGGCCATGCAGAAATGGAGAGTCAG...CTCTGCATCGGTCAGGGAAGAGCAGTGTTGGAAGGCTGGATGGCCAAGAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CCA 90 bp | TTCTTGACTGCAGTCTTACCCTCTGAGCCTTTGGCAGGGAAGGTAGAGAAGACTCATGTGTCCAGGCGCTaGATCTCAGGGCGGCTGTCC | + |
Preference number: 4 (lower is better) Translates to: FLTAVLPSEPLAGKVEKTHVSRR*ISGRLS Trigger: GGACAGCCGCCCTGAGATCCAGCGCCTGGACACATG...AGTCTTCTCTACCTTCCCTGCCAAAGGCTCAGAGGGTAAGACTGCAGTCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR TCA 90 bp | AATTCACATACATGCAGGGACAAGAGAGTTAGGCCTTCATTTCTTCTAAGACTGTCACTTGGGCGACCTTaGGGCGGCCGAGCGCGCCGC | + |
Preference number: 4 (lower is better) Translates to: NSHTCRDKRVRPSFLLRLSLGRP*GGRARR Trigger: GCGGCGCGCTCGGCCGCCTCAAGGTCGCCCAAGTGA...CAGTCTTAGAAGAAATGAAGGCCTAACTCTCTTGTCCCTGCATGTATGTGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR TCA 90 bp | ACATTGTCTCCCAAGAGTGCCACTATTAAATGGAGTGGCAGTGGCCAGTCCTGGTCTGCTGGCGGACGCTaGCTCTCCATTTCTGCATGG | + |
Preference number: 4 (lower is better) Translates to: TLSPKSATIKWSGSGQSWSAGGR*LSISAW Trigger: CCATGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGA...CCAGGACTGGCCACTGCCACTCCATTTAATAGTGGCACTCTTGGGAGACAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CCA 90 bp | CCTGCTGTGGGGTTTGACAATAGCCACTCTTGGCCATCCAGCCTTCCAACACTGCTCTCCATTTCTGCATaGCCAGGAATGTGCTCACTG | + |
Preference number: 4 (lower is better) Translates to: PAVGFDNSHSWPSSLPTLLSISA*PGMCSL Trigger: CAGTGAGCACATTCCTGGCCATGCAGAAATGGAGAG...CAGTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
3UTR CAA 72 bp | AGTCTTCCTTCACTGACCTTTCTCCAGGCAGATTCCTaGGGTAGCTATTCTGACGAACAAGGAGGGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: SLPSLTFLQADS*GSYSDEQGGAR Trigger: CCTGGCCCCTCCTTGTTCGTCAGAATAGCTACCCAAGGAATCTGCCTGGAGAAAGGTCAGTGAAGGAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 72 bp | GGAACAGGTAGGCCTGGGTTACAATACGCCTTGCTCTaGCCCTCTCTGCCCCTTGACCTAGCCAATTCTTTA | + |
Preference number: 4 (lower is better) Translates to: GTGRPGLQYALL*PSLPLDLANSL Trigger: TAAAGAATTGGCTAGGTCAAGGGGCAGAGAGGGCAAGAGCAAGGCGTATTGTAACCCAGGCCTACCTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR GCA 90 bp | GCCACTCTTGGCCATCCAGCCTTCCAACACTGCTCTTCCCTGACCGATGCAGAGCTCGATGCAGATAAATaGAATCAAGGCCAGAATCAC | + |
Preference number: 4 (lower is better) Translates to: ATLGHPAFQHCSSLTDAELDADK*NQGQNH Trigger: GTGATTCTGGCCTTGATTGCATTTATCTGCATCGAG...CTCTGCATCGGTCAGGGAAGAGCAGTGTTGGAAGGCTGGATGGCCAAGAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR CCA 90 bp | AAGAGATCTCCTCCAAACAGTACATGCAAATCCACAAGGTCACAAACAAGGCTATGGCGCCCGAGATCATaGAGGTGCTCGAGGCCTCGC | + |
Preference number: 4 (lower is better) Translates to: KRSPPNSTCKSTRSQTRLWRPRS*RCSRPR Trigger: GCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCA...TAGCCTTGTTTGTGACCTTGTGGATTTGCATGTACTGTTTGGAGGAGATCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR CCA 90 bp | AATTCACATACATGCAGGGACAAGAGAGTTAGGCCTTCATTTCTTCTAAGACTGGGCTCACCGGCTCGGTaGTGGGTTGGTACGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: NSHTCRDKRVRPSFLLRLGSPAR*WVGTGC Trigger: GCAGCCCGTACCAACCCACCACCGAGCCGGTGAGCC...CAGTCTTAGAAGAAATGAAGGCCTAACTCTCTTGTCCCTGCATGTATGTGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR GCA 90 bp | TGTCCATACAATCGAAGTGTGGGTTTGAGCGTGCCACTCTGTACCATGAGGCCAGCTCACTGCATAGGCTaGTGTTGCCAAGAAGCCAAA | + |
Preference number: 4 (lower is better) Translates to: CPYNRSVGLSVPLCTMRPAHCIG*CCQEAK Trigger: TTTGGCTTCTTGGCAACAGCAGCCTATGCAGTGAGC...TGGCCTCATGGTACAGAGTGGCACGCTCAAACCCACACTTCGATTGTATGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR GCA 90 bp | TGTCTCCACGAACACACCACATGTCCCCAACAACTGCATGTCTTGCCATGTTTTGCATGGCCAGGAATGTaGTCACTGCATAGGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: CLHEHTTCPQQLHVLPCFAWPGM*SLHRLL Trigger: CAGCAGCCTATGCAGTGAGCACATTCCTGGCCATGC...AAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGTGTTCGTGGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR GCA 90 bp | TTCTTGACTGCAGTCTTACCCTCTGAGCCTTTGGCAGGGAAGGTAGAGAAGACTCATCTCTCGACTCGGTaGGAGCTCGGATGTAGTCAT | + |
Preference number: 4 (lower is better) Translates to: FLTAVLPSEPLAGKVEKTHLSTR*ELGCSH Trigger: ATGACTACATCCGAGCTCGCACCGAGTCGAGAGATG...AGTCTTCTCTACCTTCCCTGCCAAAGGCTCAGAGGGTAAGACTGCAGTCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR CCA 90 bp | AGTATGGACCACAGGAAGGTGATTCACGTGAGAAAGAATCAAGTGATTTCTCAGGTTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGG | + |
Preference number: 4 (lower is better) Translates to: SMDHRKVIHVRKNQVISQVGTGC*RPRSWR Trigger: CCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAAC...CTGAGAAATCACTTGATTCTTTCTCACGTGAATCACCTTCCTGTGGTCCATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR GCA 90 bp | CGTGGAACATCCGTGGGAGGACGTGTCCTGGTGCAGATTCAAGTATTCTCAAATCCCAGTCACCACAAATaGACTGCAGCTTACGAACTC | + |
Preference number: 4 (lower is better) Translates to: RGTSVGGRVLVQIQVFSNPSHHK*TAAYEL Trigger: GAGTTCGTAAGCTGCAGTGCATTTGTGGTGACTGGG...ATTTGAGAATACTTGAATCTGCACCAGGACACGTCCTCCCACGGATGTTCCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR TCA 90 bp | TGTCTCCACGAACACACCACATGTCCCCAACAACTGCATGTCTTGCCATGTTTTTGGGGGATCCTCATATaGAGGTTGAGGCTGAAGAGA | + |
Preference number: 4 (lower is better) Translates to: CLHEHTTCPQQLHVLPCFWGILI*RLRLKR Trigger: TCTCTTCAGCCTCAACCTTCATATGAGGATCCCCCA...AAAACATGGCAAGACATGCAGTTGTTGGGGACATGTGGTGTGTTCGTGGAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
||
CDS-3UTR GCA 90 bp | AGGTTGGAAAAGCACAATGTGCACAATGTGCCGACTCACTCAACTCGGCCAGCATGCATAGGCTGCTGTTaGCAAGAAGCCAAATATCAC | + |
Preference number: 4 (lower is better) Translates to: RLEKHNVHNVPTHSTRPACIGCC*QEAKYH Trigger: GTGATATTTGGCTTCTTGGCAACAGCAGCCTATGCA...TGCTGGCCGAGTTGAGTGAGTCGGCACATTGTGCACATTGTGCTTTTCCAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 72 bp | GAAGGCCTCCTTTCATCACAGGATAAAACGGGTTTATaGAAGGGACTTGGGAAAGCGAGCAGAAACCCCATC | + |
Preference number: 4 (lower is better) Translates to: EGLLSSQDKTGL*KGLGKASRNPI Trigger: GATGGGGTTTCTGCTCGCTTTCCCAAGTCCCTTCAATAAACCCGTTTTATCCTGTGATGAAAGGAGGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR GCA 90 bp | ACACTGATGCTATTGTCTTTCAGAGACGATGTCTACATAAACATTGATAGGTCATGGGTTGGTACGGGCTaGTGGCGCCCGAGATCATGG | + |
Preference number: 4 (lower is better) Translates to: TLMLLSFRDDVYINIDRSWVGTG*WRPRSW Trigger: CCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCA...TGACCTATCAATGTTTATGTAGACATCGTCTCTGAAAGACAATAGCATCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CCA 90 bp | AAGAGATCTCCTCCAAACAGTACATGCAAATCCACAAGGTCACAAACAAGGCTATCCGCTCCGGTTTTATaGTTTAGAGCAGCCAACACG | + |
Preference number: 4 (lower is better) Translates to: KRSPPNSTCKSTRSQTRLSAPVL*FRAANT Trigger: CGTGTTGGCTGCTCTAAACCATAAAACCGGAGCGGA...TAGCCTTGTTTGTGACCTTGTGGATTTGCATGTACTGTTTGGAGGAGATCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CCA 90 bp | ACACTGATGCTATTGTCTTTCAGAGACGATGTCTACATAAACATTGATAGGTCATCATTAGTGCTCTGCTaGCGGACGCTGACTCTCCAT | + |
Preference number: 4 (lower is better) Translates to: TLMLLSFRDDVYINIDRSSLVLC*RTLTLH Trigger: ATGGAGAGTCAGCGTCCGCCAGCAGAGCACTAATGA...TGACCTATCAATGTTTATGTAGACATCGTCTCTGAAAGACAATAGCATCAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 72 bp | GGTTGCTGTACAAACCTCAAATCTATTACCTTCTGTTaGCACAGAGGCACAACAGGAAAGATACAGGTGTCT | + |
Preference number: 4 (lower is better) Translates to: GCCTNLKSITFC*HRGTTGKIQVS Trigger: AGACACCTGTATCTTTCCTGTTGTGCCTCTGTGCAAACAGAAGGTAATAGATTTGAGGTTTGTACAGCAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 72 bp | CTCTTAGGCCCTAAGACACCACCACATTATCATTTATaGGTATTCATGGTCTCAATGGGTCTCAGGATCATT | + |
Preference number: 4 (lower is better) Translates to: LLGPKTPPHYHL*VFMVSMGLRII Trigger: AATGATCCTGAGACCCATTGAGACCATGAATACCAATAAATGATAATGTGGTGGTGTCTTAGGGCCTAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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3UTR CAA 72 bp | ATAAATATTACAATGATTCTGTCACTAAGATGCAAATaGCTCTCAAGTCTCTTAGGCCCTAAGACACCACCA | + |
Preference number: 4 (lower is better) Translates to: INITMILSLRCK*LSSLLGPKTPP Trigger: TGGTGGTGTCTTAGGGCCTAAGAGACTTGAGAGCAATTTGCATCTTAGTGACAGAATCATTGTAATATTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CCA 90 bp | AGGCCGGCCAGCCCGCGGCGCTGGCTCACCGGCTCGGTGGTGGGTTaGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTGCTCGAGGCC | + |
Preference number: 5 (lower is better) Translates to: RPASPRRWLTGSVVG*YGLLAPEIMEVLEA Trigger: GGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCGGTGAGCCAGCGCCGCGGGCTGGCCGGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 90 bp | GCCCGCGGCGCTGGCTCACCGGCTCGGTGGTGGGTTGGTACGGGCTaGTGGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGCCCTCGA | + |
Preference number: 5 (lower is better) Translates to: ARGAGSPARWWVGTG*WRPRSWRCSRPRPR Trigger: TCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCGGTGAGCCAGCGCCGCGGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 90 bp | CGGTGGTGGGTTGGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTaGTCGAGGCCTCGCCCTCGAAGCCGTCCAGCTCCTCGCCGCCCC | + |
Preference number: 5 (lower is better) Translates to: RWWVGTGCWRPRSWR*SRPRPRSRPAPRRP Trigger: GGGGCGGCGAGGAGCTGGACGGCTTCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CCA 90 bp | CGCGGCGCTGGCTCACCGGCTCGGTGGTGGGTTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGCCCTCGAAGC | + |
Preference number: 5 (lower is better) Translates to: RGAGSPARWWVGTGC*RPRSWRCSRPRPRS Trigger: GCTTCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCGGTGAGCCAGCGCCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CCA 90 bp | CCGGCTCGGTGGTGGGTTGGTACGGGCTGCTGGCGCCCGAGATCATaGAGGTGCTCGAGGCCTCGCCCTCGAAGCCGTCCAGCTCCTCGC | + |
Preference number: 5 (lower is better) Translates to: PARWWVGTGCWRPRS*RCSRPRPRSRPAPR Trigger: GCGAGGAGCTGGACGGCTTCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CAA 90 bp | GCCACTCTTGGCCATCCAGCCTTCCAACACTGCTCTTCCCTGACCGATGCAGAGATCACTTGGGCGACCTaGAGGCGGCCGAGCGCGCCG | + |
Preference number: 5 (lower is better) Translates to: ATLGHPAFQHCSSLTDAEITWAT*RRPSAP Trigger: CGGCGCGCTCGGCCGCCTCAAGGTCGCCCAAGTGAT...CTCTGCATCGGTCAGGGAAGAGCAGTGTTGGAAGGCTGGATGGCCAAGAGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CAA 90 bp | CCTGCTGTGGGGTTTGACAATAGCCACTCTTGGCCATCCAGCCTTCCAACACTGCGGCTCGGTGGTGGGTaGGTACGGGCTGCTGGCGCC | + |
Preference number: 5 (lower is better) Translates to: PAVGFDNSHSWPSSLPTLRLGGG*VRAAGA Trigger: GGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCG...CAGTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CAA 90 bp | CCTGCTGTGGGGTTTGACAATAGCCACTCTTGGCCATCCAGCCTTCCAACACTGCAAGGCCAGAATCACTaGGGCGACCTTGAGGCGGCC | + |
Preference number: 5 (lower is better) Translates to: PAVGFDNSHSWPSSLPTLQGQNH*GDLEAA Trigger: GGCCGCCTCAAGGTCGCCCAAGTGATTCTGGCCTTG...CAGTGTTGGAAGGCTGGATGGCCAAGAGTGGCTATTGTCAAACCCCACAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 90 bp | GCGGACGCTGACTCTCCATTTCTGCATGGCCAGGAATGTGCTCACTaGATAGGCTGCTGTTGCCAAGAAGCCAAATATCACGGCAGCAAT | + |
Preference number: 5 (lower is better) Translates to: ADADSPFLHGQECAH*IGCCCQEAKYHGSN Trigger: ATTGCTGCCGTGATATTTGGCTTCTTGGCAACAGCAGCCTATGCAGTGAGCACATTCCTGGCCATGCAGAAATGGAGAGTCAGCGTCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 90 bp | GACTCTCCATTTCTGCATGGCCAGGAATGTGCTCACTGCATAGGCTaGTGTTGCCAAGAAGCCAAATATCACGGCAGCAATTTCCGCTCC | + |
Preference number: 5 (lower is better) Translates to: DSPFLHGQECAHCIG*CCQEAKYHGSNFRS Trigger: GGAGCGGAAATTGCTGCCGTGATATTTGGCTTCTTGGCAACAGCAGCCTATGCAGTGAGCACATTCCTGGCCATGCAGAAATGGAGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CAA 90 bp | GTAAGTCTTCCTGCCAAGAGTCCTAGAAGGGCCCTAGGGTCCCTCTCAGTGAGACTGCATAGGCTGCTGTaGCCAAGAAGCCAAATATCA | + |
Preference number: 5 (lower is better) Translates to: VSLPAKSPRRALGSLSVRLHRLL*PRSQIS Trigger: TGATATTTGGCTTCTTGGCAACAGCAGCCTATGCAG...TCTCACTGAGAGGGACCCTAGGGCCCTTCTAGGACTCTTGGCAGGAAGACTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 90 bp | CCATTTCTGCATGGCCAGGAATGTGCTCACTGCATAGGCTGCTGTTaGCAAGAAGCCAAATATCACGGCAGCAATTTCCGCTCCGGTTTT | + |
Preference number: 5 (lower is better) Translates to: PFLHGQECAHCIGCC*QEAKYHGSNFRSGF Trigger: AAAACCGGAGCGGAAATTGCTGCCGTGATATTTGGCTTCTTGGCAACAGCAGCCTATGCAGTGAGCACATTCCTGGCCATGCAGAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CAA 90 bp | TGTCCATACAATCGAAGTGTGGGTTTGAGCGTGCCACTCTGTACCATGAGGCCATCTGTTAGATTCCAGTaGATCTGGGGGATCCTCATA | + |
Preference number: 5 (lower is better) Translates to: CPYNRSVGLSVPLCTMRPSVRFQ*IWGILI Trigger: TATGAGGATCCCCCAGATCAACTGGAATCTAACAGA...TGGCCTCATGGTACAGAGTGGCACGCTCAAACCCACACTTCGATTGTATGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS-3UTR CAA 90 bp | TGTCCATACAATCGAAGTGTGGGTTTGAGCGTGCCACTCTGTACCATGAGGCCAGTGCTGAGTCCAGTGTaGACCAAATCTGTTAGATTC | + |
Preference number: 5 (lower is better) Translates to: CPYNRSVGLSVPLCTMRPVLSPV*TKSVRF Trigger: GAATCTAACAGATTTGGTCAACACTGGACTCAGCAC...TGGCCTCATGGTACAGAGTGGCACGCTCAAACCCACACTTCGATTGTATGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CAA 90 bp | CAGGCCGGCCAGCCCGCGGCGCTGGCTCACCGGCTCGGTGGTGGGTaGGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTGCTCGAGGC | + |
Preference number: 6 (lower is better) Translates to: QAGQPAALAHRLGGG*VRAAGARDHGGARG Trigger: GCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCGGTGAGCCAGCGCCGCGGGCTGGCCGGCCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CCA 72 bp | AGCCCGCGGCGCTGGCTCACCGGCTCGGTGGTGGGTTaGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTG | + |
Preference number: 6 (lower is better) Translates to: SPRRWLTGSVVG*YGLLAPEIMEV Trigger: CACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCGGTGAGCCAGCGCCGCGGGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CCA 72 bp | GGCTCACCGGCTCGGTGGTGGGTTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGC | + |
Preference number: 6 (lower is better) Translates to: GSPARWWVGTGC*RPRSWRCSRPR Trigger: GCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCGGTGAGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 72 bp | GCTGGCTCACCGGCTCGGTGGTGGGTTGGTACGGGCTaGTGGCGCCCGAGATCATGGAGGTGCTCGAGGCCT | + |
Preference number: 6 (lower is better) Translates to: AGSPARWWVGTG*WRPRSWRCSRP Trigger: AGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAACCCACCACCGAGCCGGTGAGCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 72 bp | GTTGGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTaGTCGAGGCCTCGCCCTCGAAGCCGTCCAGCTCCT | + |
Preference number: 6 (lower is better) Translates to: VGTGCWRPRSWR*SRPRPRSRPAP Trigger: AGGAGCTGGACGGCTTCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CAA 90 bp | CATGATAGTCTCGATGCAGATAAATGCAATCAAGGCCAGAATCACTaGGGCGACCTTGAGGCGGCCGAGCGCGCCGCGCAGGTAGTCCGG | + |
Preference number: 6 (lower is better) Translates to: HDSLDADKCNQGQNH*GDLEAAERAAQVVR Trigger: CCGGACTACCTGCGCGGCGCGCTCGGCCGCCTCAAGGTCGCCCAAGTGATTCTGGCCTTGATTGCATTTATCTGCATCGAGACTATCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CAA 90 bp | TCCATTTCTGCATGGCCAGGAATGTGCTCACTGCATAGGCTGCTGTaGCCAAGAAGCCAAATATCACGGCAGCAATTTCCGCTCCGGTTT | + |
Preference number: 6 (lower is better) Translates to: SISAWPGMCSLHRLL*PRSQISRQQFPLRF Trigger: AAACCGGAGCGGAAATTGCTGCCGTGATATTTGGCTTCTTGGCAACAGCAGCCTATGCAGTGAGCACATTCCTGGCCATGCAGAAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 72 bp | CGGGGAGCACTCCATGATAGTCTCGATGCAGATAAATaGAATCAAGGCCAGAATCACTTGGGCGACCTTGAG | + |
Preference number: 6 (lower is better) Translates to: RGALHDSLDADK*NQGQNHLGDLE Trigger: CTCAAGGTCGCCCAAGTGATTCTGGCCTTGATTGCATTTATCTGCATCGAGACTATCATGGAGTGCTCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 72 bp | AGAGAATCAGCAGGACCCCAGTCACCACAAATGCACTaGAGCTTACGAACTCAAAGAAGTAGAGGCCTTCGC | + |
Preference number: 6 (lower is better) Translates to: RESAGPQSPQMH*SLRTQRSRGLR Trigger: GCGAAGGCCTCTACTTCTTTGAGTTCGTAAGCTGCAGTGCATTTGTGGTGACTGGGGTCCTGCTGATTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS GCA 72 bp | GACTCTCCATTTCTGCATGGCCAGGAATGTGCTCACTaGATAGGCTGCTGTTGCCAAGAAGCCAAATATCAC | + |
Preference number: 6 (lower is better) Translates to: DSPFLHGQECAH*IGCCCQEAKYH Trigger: GTGATATTTGGCTTCTTGGCAACAGCAGCCTATGCAGTGAGCACATTCCTGGCCATGCAGAAATGGAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |
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CDS CCA 72 bp | CCAAATATCACGGCAGCAATTTCCGCTCCGGTTTTATaGTTTAGAGCAGCCAACACGATTGAGGCGATAAAG | + |
Preference number: 6 (lower is better) Translates to: PNITAAISAPVL*FRAANTIEAIK Trigger: CTTTATCGCCTCAATCGTGTTGGCTGCTCTAAACCATAAAACCGGAGCGGAAATTGCTGCCGTGATATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179802.2 |