Pregenerated sensors for CMTM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031875Ensembl transcript IDs: ENSMUST00000034343.5, ENSMUST00000211885.2, ENSMUST00000212081.2, ENSMUST00000212139.2, ENSMUST00000212948.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGGAGTGTAATCTTGAGAGACGGGCTCCTCGGTCTGTTCTCCCATaGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGCGTGG | + |
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Preference number: 1 (lower is better) Translates to: RECNLERRAPRSVLP*AFLPCSRSPVRTAW Trigger: CCACGCTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGGAGCCCGTCTCTCAAGATTACACTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| 3UTR TCA 90 bp | GGTCCCCAGGAAGAGAGTGCTTGGCTGGGCCTGCCCAGCCACTTGTaGCTTGGTCACTGCCACTATACTGGTTGGCTCCCTGTCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GPQEESAWLGLPSHL*LGHCHYTGWLPVSG Trigger: CCCAGAGACAGGGAGCCAACCAGTATAGTGGCAGTGACCAAGTCACAAGTGGCTGGGCAGGCCCAGCCAAGCACTCTCTTCCTGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 90 bp | AAAGGGGCTCAAGGACAGAAAGGGGAGAAGGAAGGCTTGTCAACGTaGCCTACCACGCTAGCTCAGCAGTGCCAAGCCAGCACAGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: KGAQGQKGEKEGLST*PTTLAQQCQASTAN Trigger: ATTGGCTGTGCTGGCTTGGCACTGCTGAGCTAGCGTGGTAGGGCACGTTGACAAGCCTTCCTTCTCCCCTTTCTGTCCTTGAGCCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 90 bp | TGTCCAGAGGAAGCACTTTGTCTTTTAGGGTCCCCAGGAAGAGAGTaGTTGGCTGGGCCTGCCCAGCCACTTGTGACTTGGTCACTGCCA | + |
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Preference number: 1 (lower is better) Translates to: CPEEALCLLGSPGRE*LAGPAQPLVTWSLP Trigger: TGGCAGTGACCAAGTCACAAGTGGCTGGGCAGGCCCAGCCAAGCACTCTCTTCCTGGGGACCCTAAAAGACAAAGTGCTTCCTCTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 90 bp | ACTTTGTCTTTTAGGGTCCCCAGGAAGAGAGTGCTTGGCTGGGCCTaGCCAGCCACTTGTGACTTGGTCACTGCCACTATACTGGTTGGC | + |
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Preference number: 1 (lower is better) Translates to: TLSFRVPRKRVLGWA*PATCDLVTATILVG Trigger: GCCAACCAGTATAGTGGCAGTGACCAAGTCACAAGTGGCTGGGCAGGCCCAGCCAAGCACTCTCTTCCTGGGGACCCTAAAAGACAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR-3UTR CCA 90 bp | CGCCCCCAAGGGACTACAGAGAAGTCCATGTCACCAGTGGTCCTGCCCAGGTGTGTGCAGGTTTGGGGCTaGTGGTCCAGCCTGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RPQGTTEKSMSPVVLPRCVQVWG*WSSLLW Trigger: CCACAGCAGGCTGGACCACCAGCCCCAAACCTGCAC...ACACCTGGGCAGGACCACTGGTGACATGGACTTCTCTGTAGTCCCTTGGGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR-3UTR CCA 90 bp | CGCCCCCAAGGGACTACAGAGAAGTCCATGTCACCAGTGGTCCTGCCCAGGTGTCAGGAAGAGAGTGCTTaGCTGGGCCTGCCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: RPQGTTEKSMSPVVLPRCQEESA*LGLPSH Trigger: GTGGCTGGGCAGGCCCAGCCAAGCACTCTCTTCCTG...ACACCTGGGCAGGACCACTGGTGACATGGACTTCTCTGTAGTCCCTTGGGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CAA 90 bp | GTCCATGTCACCAGTGGTCCTGCCCAGGTGTCCAGAGGAAGCACTTaGTCTTTTAGGGTCCCCAGGAAGAGAGTGCTTGGCTGGGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VHVTSGPAQVSRGST*SFRVPRKRVLGWAC Trigger: GCAGGCCCAGCCAAGCACTCTCTTCCTGGGGACCCTAAAAGACAAAGTGCTTCCTCTGGACACCTGGGCAGGACCACTGGTGACATGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CAA 90 bp | AGTGAGGTTAAAGGGGCTCAAGGACAGAAAGGGGAGAAGGAAGGCTaGTCAACGTGCCCTACCACGCTAGCTCAGCAGTGCCAAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SEVKGAQGQKGEKEG*STCPTTLAQQCQAS Trigger: GCTGGCTTGGCACTGCTGAGCTAGCGTGGTAGGGCACGTTGACAAGCCTTCCTTCTCCCCTTTCTGTCCTTGAGCCCCTTTAACCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CAA 90 bp | GGGCCTGCCCAGCCACTTGTGACTTGGTCACTGCCACTATACTGGTaGGCTCCCTGTCTCTGGGCCCTAGTAAACAAATCTTTGGGTCCG | + |
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Preference number: 2 (lower is better) Translates to: GPAQPLVTWSLPLYW*APCLWALVNKSLGP Trigger: CGGACCCAAAGATTTGTTTACTAGGGCCCAGAGACAGGGAGCCAACCAGTATAGTGGCAGTGACCAAGTCACAAGTGGCTGGGCAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CAA 90 bp | CCAGAGGAAGCACTTTGTCTTTTAGGGTCCCCAGGAAGAGAGTGCTaGGCTGGGCCTGCCCAGCCACTTGTGACTTGGTCACTGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: PEEALCLLGSPGREC*AGPAQPLVTWSLPL Trigger: TAGTGGCAGTGACCAAGTCACAAGTGGCTGGGCAGGCCCAGCCAAGCACTCTCTTCCTGGGGACCCTAAAAGACAAAGTGCTTCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR-3UTR GCA 90 bp | TCAATGCAGTGCAGGTTTGGGGCTGGTGGTCCAGCCTGCTGTGGTTTTATCTGTACGCTAGCTCAGCAGTaGCAAGCCAGCACAGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: SMQCRFGAGGPACCGFICTLAQQ*QASTAN Trigger: ATTGGCTGTGCTGGCTTGGCACTGCTGAGCTAGCGT...ACAGATAAAACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGCATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 72 bp | GACGGGCTCCTCGGTCTGTTCTCCCATGGGCATTCCTaGCATGCTCCAGGAGCCCCGTCAGGACAGCGTGGG | + |
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Preference number: 3 (lower is better) Translates to: DGLLGLFSHGHS*HAPGAPSGQRG Trigger: CCCACGCTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGGAGCCCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| 3UTR GCA 72 bp | GCTCCTCGGTCTGTTCTCCCATGGGCATTCCTGCCATaGTCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: APRSVLPWAFLP*SRSPVRTAWVR Trigger: TCTCACCCACGCTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| 3UTR CCA 72 bp | AATCTTGAGAGACGGGCTCCTCGGTCTGTTCTCCCATaGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: NLERRAPRSVLP*AFLPCSRSPVR Trigger: CCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGGAGCCCGTCTCTCAAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| 3UTR CCA 72 bp | GAGTGCTTGGCTGGGCCTGCCCAGCCACTTGTGACTTaGTCACTGCCACTATACTGGTTGGCTCCCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: ECLAGPAQPLVT*SLPLYWLAPCL Trigger: GAGACAGGGAGCCAACCAGTATAGTGGCAGTGACCAAGTCACAAGTGGCTGGGCAGGCCCAGCCAAGCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR TCA 72 bp | GAAGAGAGTGCTTGGCTGGGCCTGCCCAGCCACTTGTaGCTTGGTCACTGCCACTATACTGGTTGGCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: EESAWLGLPSHL*LGHCHYTGWLP Trigger: AGGGAGCCAACCAGTATAGTGGCAGTGACCAAGTCACAAGTGGCTGGGCAGGCCCAGCCAAGCACTCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 72 bp | CAAGGACAGAAAGGGGAGAAGGAAGGCTTGTCAACGTaGCCTACCACGCTAGCTCAGCAGTGCCAAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QGQKGEKEGLST*PTTLAQQCQAS Trigger: GCTGGCTTGGCACTGCTGAGCTAGCGTGGTAGGGCACGTTGACAAGCCTTCCTTCTCCCCTTTCTGTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CCA 72 bp | GCCCCCAAGGGACTACAGAGAAGTCCATGTCACCAGTaGTCCTGCCCAGGTGTCCAGAGGAAGCACTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: APKGLQRSPCHQ*SCPGVQRKHFV Trigger: GACAAAGTGCTTCCTCTGGACACCTGGGCAGGACCACTGGTGACATGGACTTCTCTGTAGTCCCTTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR-3UTR CAA 90 bp | TGCAGTGCAGGTTTGGGGCTGGTGGTCCAGCCTGCTGTGGTTTTATCTGTCCCTCCAGCACAGCCAATTTaGAATGTGAGGCCTCGGGAG | + |
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Preference number: 3 (lower is better) Translates to: CSAGLGLVVQPAVVLSVPPAQPI*NVRPRE Trigger: CTCCCGAGGCCTCACATTCAAAATTGGCTGTGCTGG...AGGGACAGATAAAACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 72 bp | GGCTTGTCAACGTGCCCTACCACGCTAGCTCAGCAGTaGCAAGCCAGCACAGCCAATTTTGAATGTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: GLSTCPTTLAQQ*QASTANFECEA Trigger: GGCCTCACATTCAAAATTGGCTGTGCTGGCTTGGCACTGCTGAGCTAGCGTGGTAGGGCACGTTGACAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 72 bp | GAAGCACTTTGTCTTTTAGGGTCCCCAGGAAGAGAGTaGTTGGCTGGGCCTGCCCAGCCACTTGTGACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: EALCLLGSPGRE*LAGPAQPLVTW Trigger: CCAAGTCACAAGTGGCTGGGCAGGCCCAGCCAAGCACTCTCTTCCTGGGGACCCTAAAAGACAAAGTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 72 bp | TCCCTGTTAGTAACAGAAAGTCCCACCCCACCCCCATaGTGCCACATGATTGGCTGTAGTGATTGGCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: SLLVTESPTPPP*CHMIGCSDWLR Trigger: ACGGAGCCAATCACTACAGCCAATCATGTGGCAGCATGGGGGTGGGGTGGGACTTTCTGTTACTAACAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CCA 72 bp | GCAGTGCAGGTTTGGGGCTGGTGGTCCAGCCTGCTGTaGTTTTATCTGTCCCTGTTAGTAACAGAAAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: AVQVWGWWSSLL*FYLSLLVTESP Trigger: GGGACTTTCTGTTACTAACAGGGACAGATAAAACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CCA 72 bp | CCTGAAAGTCATCTCAATGCAGTGCAGGTTTGGGGCTaGTGGTCCAGCCTGCTGTGGTTTTATCTGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PESHLNAVQVWG*WSSLLWFYLSL Trigger: CAGGGACAGATAAAACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGCATTGAGATGACTTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CCA 72 bp | GCCCAGCCACTTGTGACTTGGTCACTGCCACTATACTaGTTGGCTCCCTGTCTCTGGGCCCTAGTAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: AQPLVTWSLPLY*LAPCLWALVNK Trigger: TTTGTTTACTAGGGCCCAGAGACAGGGAGCCAACCAGTATAGTGGCAGTGACCAAGTCACAAGTGGCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 72 bp | CTGTTAGTAACAGAAAGTCCCACCCCACCCCCATGCTaGCACATGATTGGCTGTAGTGATTGGCTCCGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLVTESPTPPPC*HMIGCSDWLRL Trigger: CAAACGGAGCCAATCACTACAGCCAATCATGTGGCAGCATGGGGGTGGGGTGGGACTTTCTGTTACTAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CCA 72 bp | GAAAGTCATCTCAATGCAGTGCAGGTTTGGGGCTGGTaGTCCAGCCTGCTGTGGTTTTATCTGTCCCTGTTA | + |
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Preference number: 3 (lower is better) Translates to: ESHLNAVQVWGW*SSLLWFYLSLL Trigger: TAACAGGGACAGATAAAACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGCATTGAGATGACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CCA 72 bp | AAGGTTCCTGAAAGTCATCTCAATGCAGTGCAGGTTTaGGGCTGGTGGTCCAGCCTGCTGTGGTTTTATCTG | + |
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Preference number: 3 (lower is better) Translates to: KVPESHLNAVQV*GWWSSLLWFYL Trigger: CAGATAAAACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGCATTGAGATGACTTTCAGGAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR GCA 72 bp | TTGAATAAAAGGTTCCTGAAAGTCATCTCAATGCAGTaGAGGTTTGGGGCTGGTGGTCCAGCCTGCTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: LNKRFLKVISMQ*RFGAGGPACCG Trigger: ACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGCATTGAGATGACTTTCAGGAACCTTTTATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CCA 72 bp | AAGGTTACAAATGCCCAAGACATGGGCCCTTATTCATaGGGCCTCTTAGGTTACAGAAAAGACCATTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: KVTNAQDMGPYS*GLLGYRKDHLL Trigger: TAACAAATGGTCTTTTCTGTAACCTAAGAGGCCCCATGAATAAGGGCCCATGTCTTGGGCATTTGTAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR CCA 90 bp | CCATGCTCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGAGGGCCGAGTGGCTCTGCCATGCGCGGACTCTaGATCGGGCTCTGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PCSRSPVRTAWVRGPSGSAMRGL*IGLWLC Trigger: GCAGAGCCAGAGCCCGATCCAGAGTCCGCGCATGGC...AGAGCCACTCGGCCCTCTCACCCACGCTGTCCTGACGGGGCTCCTGGAGCATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGAGGGCCGAGTGGCTCTAGTTGTGCCATGCGCGGACTCTaGATCGGGCTCTGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRSPVRTAWVRGPSGSSCAMRGL*IGLWLC Trigger: GCAGAGCCAGAGCCCGATCCAGAGTCCGCGCATGGC...ACAACTAGAGCCACTCGGCCCTCTCACCCACGCTGTCCTGACGGGGCTCCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR TCA 90 bp | CGGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGCAGGAGGCGGCCTTTaGGAGAGCAGAGGAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RSVLPWAFLPCSRSPVRTAGGGL*ESRGRR Trigger: GCGCCTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGC...TGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR TCA 90 bp | GGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGGCAGGAGGCGGCCTTTaGGAGAGCAGAGGAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GLFSHGHSCHAPGAPSGQAGGGL*ESRGRR Trigger: GCGCCTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGC...CTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR TCA 90 bp | CTCGGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACCAGCAGAGGCACTGTaGGGAAGGCAGATGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LGLFSHGHSCHAPGAPSGPAEAL*GRQMRR Trigger: CCTCCGCATCTGCCTTCCTCACAGTGCCTCTGCTGG...TCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGAGGGCCGAGTGGCTCTAGTGCAGGAAGTCCATCATaGGCCAGCACAAACCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CSRSPVRTAWVRGPSGSSAGSPS*ASTNPA Trigger: GGCAGGGTTTGTGCTGGCCCATGATGGACTTCCTGC...ACTAGAGCCACTCGGCCCTCTCACCCACGCTGTCCTGACGGGGCTCCTGGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR TCA 90 bp | CCATGCTCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGAGGGCCGAGTGGCTCTGATGAAGGTGATGAATaGAAGACCCGACTCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PCSRSPVRTAWVRGPSGSDEGDE*KTRLGQ Trigger: CTGGCCGAGTCGGGTCTTTCATTCATCACCTTCATC...AGAGCCACTCGGCCCTCTCACCCACGCTGTCCTGACGGGGCTCCTGGAGCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR GCA 90 bp | CCTCGGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGTGTGAGGAAGGCAGATaGGGAGGACACCACGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: PRSVLPWAFLPCSRSPVRCEEGR*GGHHVA Trigger: TGCTACGTGGTGTCCTCCGCATCTGCCTTCCTCACA...CCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CCA 90 bp | CGCCCCCAAGGGACTACAGAGAAGTCCATGTCACCAGTGGTCCTGCCCAGGTGTGCAGGAAGTCCATCATaGGCCAGCACAAACCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RPQGTTEKSMSPVVLPRCAGSPS*ASTNPA Trigger: GGCAGGGTTTGTGCTGGCCCATGATGGACTTCCTGC...ACACCTGGGCAGGACCACTGGTGACATGGACTTCTCTGTAGTCCCTTGGGGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR CCA 90 bp | CCATGCTCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGAGGGCCGAGTGGCTCTAGTCTGAGTCCGAGTTaGAGTTCTCTTCTTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PCSRSPVRTAWVRGPSGSSLSPS*SSLLLS Trigger: GGACAGAAGAAGAGAACTCCAACTCGGACTCAGACT...AGAGCCACTCGGCCCTCTCACCCACGCTGTCCTGACGGGGCTCCTGGAGCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR TCA 90 bp | TCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGCGGATGAAGGTGATGAATaGAAGACCCGACTCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVLPWAFLPCSRSPVRTADEGDE*KTRLGQ Trigger: CTGGCCGAGTCGGGTCTTTCATTCATCACCTTCATC...CGCTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR GCA 90 bp | TCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGCGGGCCAGCACAAACCCTaGCATTTGTCATTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SVLPWAFLPCSRSPVRTAGQHKP*HLSFSC Trigger: GCAGCTGAATGACAAATGGCAGGGTTTGTGCTGGCC...CGCTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGAGGGCCGAGTGGCTCTAGTAGTCTGAGTCCGAGTTaGAGTTCTCTTCTTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CSRSPVRTAWVRGPSGSSSLSPS*SSLLLS Trigger: GGACAGAAGAAGAGAACTCCAACTCGGACTCAGACT...ACTAGAGCCACTCGGCCCTCTCACCCACGCTGTCCTGACGGGGCTCCTGGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR GCA 90 bp | GGCTCCTCGGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTTTCCCAGAGTCTCCTTaGTTGAGGAATTTGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: GSSVCSPMGIPAMLQEPRFPESP*LRNLAT Trigger: AGTGGCCAAATTCCTCAAGCAAGGAGACTCTGGGAA...ACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGAGGGCCGAGTGGCTCTAGTTGTTCTTCTTCTGTCCTATaGGCTGTGGTCTCATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SRSPVRTAWVRGPSGSSCSSSVL*AVVSFP Trigger: TGGGAATGAGACCACAGCCCATAGGACAGAAGAAGA...ACAACTAGAGCCACTCGGCCCTCTCACCCACGCTGTCCTGACGGGGCTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| 3UTR CAA 72 bp | AGAGTGCTTGGCTGGGCCTGCCCAGCCACTTGTGACTaGGTCACTGCCACTATACTGGTTGGCTCCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RVLGWACPATCD*VTATILVGSLS Trigger: AGACAGGGAGCCAACCAGTATAGTGGCAGTGACCAAGTCACAAGTGGCTGGGCAGGCCCAGCCAAGCACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGCCAGAGTCTCCTTGCTTaGGGAATTTGGCCACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VCSPMGIPAMLQEPRQDSQSLLA*GIWPLH Trigger: ATGAAGTGGCCAAATTCCTCAAGCAAGGAGACTCTG...GCTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR GCA 90 bp | ACCAGTGGTCCTGCCCAGGTGTCCAGAGGAAGCACTTTGTCTTTTAGGGTCCCCTGTGAGGAAGGCAGATaGGGAGGACACCACGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: TSGPAQVSRGSTLSFRVPCEEGR*GGHHVA Trigger: TGCTACGTGGTGTCCTCCGCATCTGCCTTCCTCACA...GGGGACCCTAAAAGACAAAGTGCTTCCTCTGGACACCTGGGCAGGACCACTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR GCA 90 bp | TCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGCGTTCCCAGAGTCTCCTTaGTTGAGGAATTTGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SVLPWAFLPCSRSPVRTAFPESP*LRNLAT Trigger: AGTGGCCAAATTCCTCAAGCAAGGAGACTCTGGGAA...CGCTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| 3UTR CAA 72 bp | AAAGGGGCTCAAGGACAGAAAGGGGAGAAGGAAGGCTaGTCAACGTGCCCTACCACGCTAGCTCAGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: KGAQGQKGEKEG*STCPTTLAQQC Trigger: GCACTGCTGAGCTAGCGTGGTAGGGCACGTTGACAAGCCTTCCTTCTCCCCTTTCTGTCCTTGAGCCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR CCA 90 bp | TGCAGTGCAGGTTTGGGGCTGGTGGTCCAGCCTGCTGTGGTTTTATCTGTCCCTCTGTCCTATGGGCTGTaGTCTCATTCCCAGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: CSAGLGLVVQPAVVLSVPLSYGL*SHSQSL Trigger: GAGACTCTGGGAATGAGACCACAGCCCATAGGACAG...AGGGACAGATAAAACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR CCA 90 bp | CGCCCCCAAGGGACTACAGAGAAGTCCATGTCACCAGTGGTCCTGCCCAGGTGTTCTTCTTCTGTCCTATaGGCTGTGGTCTCATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RPQGTTEKSMSPVVLPRCSSSVL*AVVSFP Trigger: TGGGAATGAGACCACAGCCCATAGGACAGAAGAAGA...ACACCTGGGCAGGACCACTGGTGACATGGACTTCTCTGTAGTCCCTTGGGGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR GCA 90 bp | GGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGCAGGTAGAAGTCAATTaGGAACACAATTGTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GLFSHGHSCHAPGAPSGQQVEVN*EHNCGK Trigger: TTTGCCACAATTGTGTTCGCAATTGACTTCTACCTG...CTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| 3UTR CAA 72 bp | TGCTGCCACATGATTGGCTGTAGTGATTGGCTCCGTTaGATGTGTGCTTCGGTGGGGGCAGTGAGGTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: CCHMIGCSDWLR*MCASVGAVRLK Trigger: CTTTAACCTCACTGCCCCCACCGAAGCACACATCAAACGGAGCCAATCACTACAGCCAATCATGTGGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR TCA 90 bp | AGGTTAAAGGGGCTCAAGGACAGAAAGGGGAGAAGGAAGGCTTGTCAACGTGCCCAGAGTCTCCTTGCTTaGGGAATTTGGCCACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RLKGLKDRKGRRKACQRAQSLLA*GIWPLH Trigger: ATGAAGTGGCCAAATTCCTCAAGCAAGGAGACTCTG...GGCACGTTGACAAGCCTTCCTTCTCCCCTTTCTGTCCTTGAGCCCCTTTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| 3UTR CAA 72 bp | CAGCCACTTGTGACTTGGTCACTGCCACTATACTGGTaGGCTCCCTGTCTCTGGGCCCTAGTAAACAAATCT | + |
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Preference number: 4 (lower is better) Translates to: QPLVTWSLPLYW*APCLWALVNKS Trigger: AGATTTGTTTACTAGGGCCCAGAGACAGGGAGCCAACCAGTATAGTGGCAGTGACCAAGTCACAAGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR GCA 90 bp | GAGGAGGGAAACTTCTTGAATAAAAGGTTCCTGAAAGTCATCTCAATGCAGTGCGGCCAGCACAAACCCTaGCATTTGTCATTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EEGNFLNKRFLKVISMQCGQHKP*HLSFSC Trigger: GCAGCTGAATGACAAATGGCAGGGTTTGTGCTGGCC...GCACTGCATTGAGATGACTTTCAGGAACCTTTTATTCAAGAAGTTTCCCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS GCA 90 bp | AACAGGGCTCGGAGTCCCGGCACTGTCCTGCCACTTCGGGGGCCATaGGCGGACTCTGGATCGGGCTCTGGCTCTGCGTCCGGGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: NRARSPGTVLPLRGP*ADSGSGSGSASGGH Trigger: GTGGCCCCCGGACGCAGAGCCAGAGCCCGATCCAGAGTCCGCGCATGGCCCCCGAAGTGGCAGGACAGTGCCGGGACTCCGAGCCCTGTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000034343.5 ENSMUST00000211885.2 ENSMUST00000212081.2 ENSMUST00000212139.2 ENSMUST00000212948.2 |
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| CDS-3UTR CAA 90 bp | CCTCGGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGAGCAGGAGGCGGCCTTaGAGAGAGCAGAGGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: PRSVLPWAFLPCSRSPVRSRRRP*REQRKA Trigger: CGCCTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCT...CCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CAA 90 bp | CCTCGGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGGCCCCATCTGAGTATTaGGCGACAGCAGTGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: PRSVLPWAFLPCSRSPVRAPSEY*ATAVME Trigger: CTCCATCACTGCTGTCGCCAAATACTCAGATGGGGC...CCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CAA 90 bp | TCCAGGAGCCCCGTCAGGACAGCGTGGGTGAGAGGGCCGAGTGGCTCTAGTTGTGCCCCATCTGAGTATTaGGCGACAGCAGTGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: SRSPVRTAWVRGPSGSSCAPSEY*ATAVME Trigger: CTCCATCACTGCTGTCGCCAAATACTCAGATGGGGC...ACAACTAGAGCCACTCGGCCCTCTCACCCACGCTGTCCTGACGGGGCTCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CAA 90 bp | CCTCGGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGATTCCCAGAGTCTCCTaGCTTGAGGAATTTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: PRSVLPWAFLPCSRSPVRIPRVS*LEEFGH Trigger: GTGGCCAAATTCCTCAAGCAAGGAGACTCTGGGAAT...CCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACCGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CAA 90 bp | TCTCAATGCAGTGCAGGTTTGGGGCTGGTGGTCCAGCCTGCTGTGGTTTTATCTAGCAGGAGGCGGCCTTaGAGAGAGCAGAGGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: SQCSAGLGLVVQPAVVLSSRRRP*REQRKA Trigger: CGCCTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCT...AGATAAAACCACAGCAGGCTGGACCACCAGCCCCAAACCTGCACTGCATTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS-3UTR CAA 90 bp | GGTCTGTTCTCCCATGGGCATTCCTGCCATGCTCCAGGAGCCCCGTCAGGACAGATTCCCAGAGTCTCCTaGCTTGAGGAATTTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: GLFSHGHSCHAPGAPSGQIPRVS*LEEFGH Trigger: GTGGCCAAATTCCTCAAGCAAGGAGACTCTGGGAAT...CTGTCCTGACGGGGCTCCTGGAGCATGGCAGGAATGCCCATGGGAGAACAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS-3UTR CAA 90 bp | CCCACCCCACCCCCATGCTGCCACATGATTGGCTGTAGTGATTGGCTCCGTTTGCCTTGCTTGAGGAATTaGGCCACTTCATTAAAGATC | + |
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Preference number: 5 (lower is better) Translates to: PTPPPCCHMIGCSDWLRLPCLRN*ATSLKI Trigger: GATCTTTAATGAAGTGGCCAAATTCCTCAAGCAAGG...CAAACGGAGCCAATCACTACAGCCAATCATGTGGCAGCATGGGGGTGGGGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034343.5 |
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| CDS CCA 90 bp | CCATCATGGGCCAGCACAAACCCTGCCATTTGTCATTCAGCTGCATaGCATCAGCAAAGAGGAAGTAAACGGCCAACAGAAACTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PSWASTNPAICHSAA*HQQRGSKRPTETPA Trigger: TGCTGGAGTTTCTGTTGGCCGTTTACTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAATGGCAGGGTTTGTGCTGGCCCATGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 ENSMUST00000212139.2 ENSMUST00000212948.2 |
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| CDS CCA 72 bp | CACTGTCCTGCCACTTCGGGGGCCATGCGCGGACTCTaGATCGGGCTCTGGCTCTGCGTCCGGGGGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: HCPATSGAMRGL*IGLWLCVRGPH Trigger: ATGTGGCCCCCGGACGCAGAGCCAGAGCCCGATCCAGAGTCCGCGCATGGCCCCCGAAGTGGCAGGACAGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000034343.5 ENSMUST00000211885.2 ENSMUST00000212081.2 ENSMUST00000212139.2 ENSMUST00000212948.2 |
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| CDS CAA 90 bp | AAGGTGATGAATGAAAGACCCGACTCGGCCAGCAGGAGGCGGCCTTaGAGAGAGCAGAGGAAGGCGCGCGCGGGCAACAGGGCTCGGAGT | + |
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Preference number: 6 (lower is better) Translates to: KVMNERPDSASRRRP*REQRKARAGNRARS Trigger: ACTCCGAGCCCTGTTGCCCGCGCGCGCCTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCTGGCCGAGTCGGGTCTTTCATTCATCACCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034343.5 ENSMUST00000211885.2 ENSMUST00000212081.2 ENSMUST00000212139.2 ENSMUST00000212948.2 |
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| CDS TCA 72 bp | TGCGGAGGACACCACGTAGCAGATGAAGGTGATGAATaGAAGACCCGACTCGGCCAGCAGGAGGCGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CGGHHVADEGDE*KTRLGQQEAAF Trigger: AAAGGCCGCCTCCTGCTGGCCGAGTCGGGTCTTTCATTCATCACCTTCATCTGCTACGTGGTGTCCTCCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034343.5 ENSMUST00000211885.2 ENSMUST00000212081.2 ENSMUST00000212139.2 ENSMUST00000212948.2 |
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| CDS TCA 72 bp | AGTAAACGGCCAACAGAAACTCCAGCAGAGGCACTGTaGGGAAGGCAGATGCGGAGGACACCACGTAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SKRPTETPAEAL*GRQMRRTPRSR Trigger: TCTGCTACGTGGTGTCCTCCGCATCTGCCTTCCTCACAGTGCCTCTGCTGGAGTTTCTGTTGGCCGTTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034343.5 ENSMUST00000211885.2 ENSMUST00000212081.2 ENSMUST00000212139.2 ENSMUST00000212948.2 |
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| CDS GCA 72 bp | CAGCGCAGGAAGTCCATCATGGGCCAGCACAAACCCTaGCATTTGTCATTCAGCTGCATGGCATCAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: QRRKSIMGQHKP*HLSFSCMASAK Trigger: CTTTGCTGATGCCATGCAGCTGAATGACAAATGGCAGGGTTTGTGCTGGCCCATGATGGACTTCCTGCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 ENSMUST00000212139.2 ENSMUST00000212948.2 |
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| CDS CCA 72 bp | TCTGAGTCCGAGTTGGAGTTCTCTTCTTCTGTCCTATaGGCTGTGGTCTCATTCCCAGAGTCTCCTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SESELEFSSSVL*AVVSFPESPCL Trigger: CAAGCAAGGAGACTCTGGGAATGAGACCACAGCCCATAGGACAGAAGAAGAGAACTCCAACTCGGACTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 |
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| CDS TCA 72 bp | AAAGCCAAAAACTCCAGCTGCTTTGTAAGCCCCATCTaGGTATTTGGCGACAGCAGTGATGGAGATGACGAA | + |
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Preference number: 6 (lower is better) Translates to: KAKNSSCFVSPI*VFGDSSDGDDE Trigger: TTCGTCATCTCCATCACTGCTGTCGCCAAATACTCAGATGGGGCTTACAAAGCAGCTGGAGTTTTTGGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034343.5 ENSMUST00000212081.2 ENSMUST00000212948.2 |
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