Pregenerated sensors for CMTM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000110430Ensembl transcript IDs: ENSMUST00000159039.2, ENSMUST00000160596.8, ENSMUST00000164175.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAACAGGAACCAGACAGTCCCACCCTCCATGCACCAGCATTCACTaGGCCCCACCGGTCCTAGCCAGGCCGCCCTCAAAAAGGAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: ATGTRQSHPPCTSIH*APPVLARPPSKRSP Trigger: GGGACTCCTTTTTGAGGGCGGCCTGGCTAGGACCGGTGGGGCTCAGTGAATGCTGGTGCATGGAGGGTGGGACTGTCTGGTTCCTGTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR GCA 90 bp | TGGCGCGAGCCCACCTCATCTAGTGGACCAGCAGGATCTCCTCCATaGAACAGGAACCAGACAGTCCCACCCTCCATGCACCAGCATTCA | + |
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Preference number: 1 (lower is better) Translates to: WREPTSSSGPAGSPP*NRNQTVPPSMHQHS Trigger: TGAATGCTGGTGCATGGAGGGTGGGACTGTCTGGTTCCTGTTGCATGGAGGAGATCCTGCTGGTCCACTAGATGAGGTGGGCTCGCGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR TCA 90 bp | CGTGCCTTTAAGGTCACACTCACGTACGTGGGCATGGGAGCTCCGTaGTGGCCTGGTGGGAGTGATTATACATGTAGATATGATCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: RAFKVTLTYVGMGAP*WPGGSDYTCRYDLV Trigger: CACAAGATCATATCTACATGTATAATCACTCCCACCAGGCCATCACGGAGCTCCCATGCCCACGTACGTGAGTGTGACCTTAAAGGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAGGAACCAGACAGTCCCACCCTCCATGCACCAGCATTCACTGAGCCCCACTTTGCTCCCACTCCCTaGGGTCCTTTTCCTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: QQEPDSPTLHAPAFTEPHFAPTP*GPFPPN Trigger: GTTGGGAGGAAAAGGACCCCAGGGAGTGGGAGCAAA...GTGGGGCTCAGTGAATGCTGGTGCATGGAGGGTGGGACTGTCTGGTTCCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTCGTGTCCTCTCTGGGCTGACCTCCTCTGGGCCGAAATGGAAACTTTATAGAAAGCAGAAGTGCTaGCAGCATAGAAGCCGTGCC | + |
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Preference number: 2 (lower is better) Translates to: WGRVLSGLTSSGPKWKLYRKQKC*QHRSRA Trigger: GGCACGGCTTCTATGCTGGCAGCACTTCTGCTTTCT...ATAAAGTTTCCATTTCGGCCCAGAGGAGGTCAGCCCAGAGAGGACACGACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCATACAGATGAGCAGGATCAGGACCGGATGTGGGAGCATTGTTTCAAAGTAGGCATGGGAGCTCCGTaGTGGCCTGGTGGGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: FHTDEQDQDRMWEHCFKVGMGAP*WPGGSD Trigger: ATCACTCCCACCAGGCCATCACGGAGCTCCCATGCC...TACTTTGAAACAATGCTCCCACATCCGGTCCTGATCCTGCTCATCTGTATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCATACAGATGAGCAGGATCAGGACCGGATGTGGGAGCATTGTTTCAAAGTAGAGATCATGCAGCCGTaGGCATGGGAGCTCCGTGAT | + |
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Preference number: 2 (lower is better) Translates to: FHTDEQDQDRMWEHCFKVEIMQP*AWELRD Trigger: ATCACGGAGCTCCCATGCCCACGGCTGCATGATCTC...TACTTTGAAACAATGCTCCCACATCCGGTCCTGATCCTGCTCATCTGTATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCAGGATCTCCTCCATGCAACAGGAACCAGACAGTCCCACCCTCCATGCACACCTCCAGGGGCAGCTaGTGGAGCAAGAGGCAATGG | + |
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Preference number: 3 (lower is better) Translates to: PAGSPPCNRNQTVPPSMHTSRGS*WSKRQW Trigger: CCATTGCCTCTTGCTCCACAAGCTGCCCCTGGAGGT...GTGCATGGAGGGTGGGACTGTCTGGTTCCTGTTGCATGGAGGAGATCCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR TCA 72 bp | GAACAGGCCCAGCTCGAGAGAGAGCCTGGTGTCTCCTaGCCTGTTCAAGGGTGGCTCTCAACTGACCACTGG | + |
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Preference number: 3 (lower is better) Translates to: EQAQLEREPGVS*PVQGWLSTDHW Trigger: CCAGTGGTCAGTTGAGAGCCACCCTTGAACAGGTCAGGAGACACCAGGCTCTCTCTCGAGCTGGGCCTGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR-3UTR CAA 90 bp | ACCGGTCCTAGCCAGGCCGCCCTCAAAAAGGAGTCCCAGGTTTGTGGCTGGCCTCATGTAGATATGATCTaGTGTCACCCAGCGGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: TGPSQAALKKESQVCGWPHVDMI*CHPAEG Trigger: GCCCTCCGCTGGGTGACACAAGATCATATCTACATG...AGGCCAGCCACAAACCTGGGACTCCTTTTTGAGGGCGGCCTGGCTAGGACCGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGGGTCGTGTCCTCTCTGGGCTGACCTCCTCTGGGCCGAAATGGAAACTTTAGTTTGTGGCTGGCCTTaGCTCCCACTCCCTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: LGSCPLWADLLWAEMETLVCGWP*LPLPGV Trigger: GACCCCAGGGAGTGGGAGCAAAGGCCAGCCACAAAC...TAAAGTTTCCATTTCGGCCCAGAGGAGGTCAGCCCAGAGAGGACACGACCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR CCA 72 bp | ATAGAAGCCGTGCCTTTAAGGTCACACTCACGTACGTaGGCATGGGAGCTCCGTGATGGCCTGGTGGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: IEAVPLRSHSRT*AWELRDGLVGV Trigger: CACTCCCACCAGGCCATCACGGAGCTCCCATGCCCACGTACGTGAGTGTGACCTTAAAGGCACGGCTTCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR TCA 72 bp | TGCAGAGATCATGCAGCCGTGGGCATGGGAGCTCCGTaGTGGCCTGGTGGGAGTGATTATACATGTAGATAT | + |
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Preference number: 3 (lower is better) Translates to: CRDHAAVGMGAP*WPGGSDYTCRY Trigger: ATATCTACATGTATAATCACTCCCACCAGGCCATCACGGAGCTCCCATGCCCACGGCTGCATGATCTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| 3UTR GCA 72 bp | CCTGTTCAAGGGTGGCTCTCAACTGACCACTGGAACTaGAGAATTCTAACGCTTGCTCTTGATTGGCGCGAG | + |
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Preference number: 3 (lower is better) Translates to: PVQGWLSTDHWN*RILTLALDWRE Trigger: CTCGCGCCAATCAAGAGCAAGCGTTAGAATTCTGCAGTTCCAGTGGTCAGTTGAGAGCCACCCTTGAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR TCA 72 bp | TGGTGTCTCCTGACCTGTTCAAGGGTGGCTCTCAACTaGCCACTGGAACTGCAGAATTCTAACGCTTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: WCLLTCSRVALN*PLELQNSNACS Trigger: AGAGCAAGCGTTAGAATTCTGCAGTTCCAGTGGTCAGTTGAGAGCCACCCTTGAACAGGTCAGGAGACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| 3UTR-3UTR CAA 90 bp | TATGCAGATTGCCGCTTCCATACAGATGAGCAGGATCAGGACCGGATGTGGGAGCATGTAGATATGATCTaGTGTCACCCAGCCAATCAG | + |
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Preference number: 3 (lower is better) Translates to: YADCRFHTDEQDQDRMWEHVDMI*CHPANQ Trigger: CTGATTGGCTGGGTGACACAAGATCATATCTACATG...CTCCCACATCCGGTCCTGATCCTGCTCATCTGTATGGAAGCGGCAATCTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCTGGCCTTTGCTCCCACTCCCTGGGGTCCTTTTCCTCCCAACCTCCAGGAGGTCCCTGGTGAGGTaGAGCAGAGGCAGCATACGC | + |
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Preference number: 4 (lower is better) Translates to: CGWPLLPLPGVLFLPTSRRSLVR*SRGSIR Trigger: GCGTATGCTGCCTCTGCTCCACCTCACCAGGGACCT...CCTGGAGGTTGGGAGGAAAAGGACCCCAGGGAGTGGGAGCAAAGGCCAGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR GCA 90 bp | AAGGAGTCCCAGGTTTGTGGCTGGCCTTTGCTCCCACTCCCTGGGGTCCTTTTCGACACACAGGACTGCTaGCGAGAGGCACAGGATCCC | + |
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Preference number: 4 (lower is better) Translates to: KESQVCGWPLLPLPGVLFDTQDC*REAQDP Trigger: GGGATCCTGTGCCTCTCGGCAGCAGTCCTGTGTGTC...GAAAAGGACCCCAGGGAGTGGGAGCAAAGGCCAGCCACAAACCTGGGACTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | TTGGGGTCGTGTCCTCTCTGGGCTGACCTCCTCTGGGCCGAAATGGAAACTTTACTGAAGGTCCCTGGCTaGCTGGTGTCCCGGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: LGSCPLWADLLWAEMETLLKVPG*LVSRVL Trigger: CAGTACCCGGGACACCAGCCAGCCAGGGACCTTCAG...TAAAGTTTCCATTTCGGCCCAGAGGAGGTCAGCCCAGAGAGGACACGACCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR TCA 90 bp | TCTCCTGACCTGTTCAAGGGTGGCTCTCAACTGACCACTGGAACTGCAGAATTCTGGTGTCCCGGGTACTaGAGGTCCCTGGCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SPDLFKGGSQLTTGTAEFWCPGY*RSLAGW Trigger: CCAGCCAGCCAGGGACCTTCAGTACCCGGGACACCA...GAATTCTGCAGTTCCAGTGGTCAGTTGAGAGCCACCCTTGAACAGGTCAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR GCA 90 bp | GGTTTGTGGCTGGCCTTTGCTCCCACTCCCTGGGGTCCTTTTCCTCCCAACCTCTCTCTGTACACTGACTaGAAGGACCTAGTGGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: GLWLAFAPTPWGPFPPNLSLYTD*KDLVGR Trigger: GCGACCCACTAGGTCCTTGCAGTCAGTGTACAGAGA...GAGGTTGGGAGGAAAAGGACCCCAGGGAGTGGGAGCAAAGGCCAGCCACAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR TCA 90 bp | AGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTGACTGGTGTCCCGGGTACTaGAGGTCCCTGGCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SDYTCRYDLVSPSGGLGDWCPGY*RSLAGW Trigger: CCAGCCAGCCAGGGACCTTCAGTACCCGGGACACCA...GTCACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | GGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTCTGAAGGTCCCTGGCTaGCTGGTGTCCCGGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: GSDYTCRYDLVSPSGGLGLKVPG*LVSRVL Trigger: CAGTACCCGGGACACCAGCCAGCCAGGGACCTTCAG...ACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR TCA 90 bp | GGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTGACTGAAGGTCCCTGGTaGGGTGGAGCAGAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GVIIHVDMILCHPAEGWVTEGPW*GGAEAA Trigger: TGCTGCCTCTGCTCCACCTCACCAGGGACCTTCAGT...CACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR TCA 90 bp | CCTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGACTGAAGGTCCCTGGTaGGGTGGAGCAGAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGGSDYTCRYDLVSPSGGTEGPW*GGAEAA Trigger: TGCTGCCTCTGCTCCACCTCACCAGGGACCTTCAGT...CCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR GCA 90 bp | GGCCTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGACACACAGGACTGCTaGCGAGAGGCACAGGATCCC | + |
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Preference number: 4 (lower is better) Translates to: GLVGVIIHVDMILCHPAEDTQDC*REAQDP Trigger: GGGATCCTGTGCCTCTCGGCAGCAGTCCTGTGTGTC...CTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR TCA 90 bp | ACCGGTCCTAGCCAGGCCGCCCTCAAAAAGGAGTCCCAGGTTTGTGGCTGGCCTTCCAAGAAATACTGTTaGAATGGCAGAGTTGATCAG | + |
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Preference number: 4 (lower is better) Translates to: TGPSQAALKKESQVCGWPSKKYC*NGRVDQ Trigger: CTGATCAACTCTGCCATTTCAACAGTATTTCTTGGA...AGGCCAGCCACAAACCTGGGACTCCTTTTTGAGGGCGGCCTGGCTAGGACCGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR GCA 90 bp | TATGCAGATTGCCGCTTCCATACAGATGAGCAGGATCAGGACCGGATGTGGGAGTCTCTGTACACTGACTaGAAGGACCTAGTGGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: YADCRFHTDEQDQDRMWESLYTD*KDLVGR Trigger: GCGACCCACTAGGTCCTTGCAGTCAGTGTACAGAGA...CTCCCACATCCGGTCCTGATCCTGCTCATCTGTATGGAAGCGGCAATCTGCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAAGGTCCCTGGTGAGGTaGAGCAGAGGCAGCATACGC | + |
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Preference number: 4 (lower is better) Translates to: WPGGSDYTCRYDLVSPSGRSLVR*SRGSIR Trigger: GCGTATGCTGCCTCTGCTCCACCTCACCAGGGACCT...TCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | AGCAGGATCTCCTCCATGCAACAGGAACCAGACAGTCCCACCCTCCATGCACCAACTACAAACAGCTCCTaGGCACCACCAATGACGAAA | + |
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Preference number: 4 (lower is better) Translates to: SRISSMQQEPDSPTLHAPTTNSS*APPMTK Trigger: TTTCGTCATTGGTGGTGCCCAGGAGCTGTTTGTAGT...TGGTGCATGGAGGGTGGGACTGTCTGGTTCCTGTTGCATGGAGGAGATCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | TCGTGTCCTCTCTGGGCTGACCTCCTCTGGGCCGAAATGGAAACTTTATCGGTGTGCTTCTGCCTCAGTTaGGTGGCAGAGAGCTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: SCPLWADLLWAEMETLSVCFCLS*VAESLV Trigger: AACTAAGCTCTCTGCCACCCAACTGAGGCAGAAGCA...CACCGATAAAGTTTCCATTTCGGCCCAGAGGAGGTCAGCCCAGAGAGGACACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR TCA 90 bp | TTCCATACAGATGAGCAGGATCAGGACCGGATGTGGGAGCATTGTTTCAAAGTAACTGAAGGTCCCTGGTaGGGTGGAGCAGAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FHTDEQDQDRMWEHCFKVTEGPW*GGAEAA Trigger: TGCTGCCTCTGCTCCACCTCACCAGGGACCTTCAGT...TACTTTGAAACAATGCTCCCACATCCGGTCCTGATCCTGCTCATCTGTATGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| CDS-3UTR TCA 90 bp | GATCTCCTCCATGCAACAGGAACCAGACAGTCCCACCCTCCATGCACCAGCATTTTGAAATGGCAGAGTTaGTCAGATCAAGCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: DLLHATGTRQSHPPCTSILKWQS*SDQAEA Trigger: GGCCTCTGCTTGATCTGATCAACTCTGCCATTTCAA...AATGCTGGTGCATGGAGGGTGGGACTGTCTGGTTCCTGTTGCATGGAGGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | GGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTGCTGACTGGATGGTGTaGCACGTACTGAAGGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: GSDYTCRYDLVSPSGGLGADWMV*HVLKVA Trigger: AGCGACCTTCAGTACGTGCCACACCATCCAGTCAGC...ACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | GTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTGACGGCTGACTGGATGGTGTaGCACGTACTGAAGGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: VIIHVDMILCHPAEGWVTADWMV*HVLKVA Trigger: AGCGACCTTCAGTACGTGCCACACCATCCAGTCAGC...CGTCACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | TGTGGCTGGCCTTTGCTCCCACTCCCTGGGGTCCTTTTCCTCCCAACCTCCAGGGGCACTTTCTCATGTTaGGTGTATTTCTTTGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: CGWPLLPLPGVLFLPTSRGTFSC*VYFFGN Trigger: ATTACCAAAGAAATACACCCAACATGAGAAAGTGCC...CCTGGAGGTTGGGAGGAAAAGGACCCCAGGGAGTGGGAGCAAAGGCCAGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | TATGCAGATTGCCGCTTCCATACAGATGAGCAGGATCAGGACCGGATGTGGGAGGACCAGTCGAGTTGGTaGCACTTTCTCATGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: YADCRFHTDEQDQDRMWEDQSSW*HFLMLG Trigger: ACCCAACATGAGAAAGTGCCACCAACTCGACTGGTC...CTCCCACATCCGGTCCTGATCCTGCTCATCTGTATGGAAGCGGCAATCTGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGTCGTGTCCTCTCTGGGCTGACCTCCTCTGGGCCGAAATGGAAACTTTATTGGACCAGTCGAGTTaGTGGCACTTTCTCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: LGSCPLWADLLWAEMETLLDQSS*WHFLML Trigger: CAACATGAGAAAGTGCCACCAACTCGACTGGTCCAA...TAAAGTTTCCATTTCGGCCCAGAGGAGGTCAGCCCAGAGAGGACACGACCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR GCA 90 bp | GGTCGTGTCCTCTCTGGGCTGACCTCCTCTGGGCCGAAATGGAAACTTTATCGGGCTGAGCAGCAAAAATaGCAGAAGCTATCTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: GRVLSGLTSSGPKWKLYRAEQQK*QKLSLN Trigger: ATTCAGAGATAGCTTCTGGCATTTTTGCTGCTCAGC...CCGATAAAGTTTCCATTTCGGCCCAGAGGAGGTCAGCCCAGAGAGGACACGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCCAATCAGCTAGGTCCCTGGTGAGGTaGAGCAGAGGCAGCATACGC | + |
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Preference number: 4 (lower is better) Translates to: GGSDYTCRYDLVSPSQSARSLVR*SRGSIR Trigger: GCGTATGCTGCCTCTGCTCCACCTCACCAGGGACCT...AGCTGATTGGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| CDS-3UTR CCA 90 bp | CTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTCAAGCAGAGGCCAGTaGATACAGGCCATCGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LVGVIIHVDMILCHPAEGSSRGQ*IQAIVV Trigger: AACCACGATGGCCTGTATCCACTGGCCTCTGCTTGA...GCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | GTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTGACGTCAAGCAGAGGCCAGTaGATACAGGCCATCGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VIIHVDMILCHPAEGWVTSSRGQ*IQAIVV Trigger: AACCACGATGGCCTGTATCCACTGGCCTCTGCTTGA...CGTCACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | TCTCCTGACCTGTTCAAGGGTGGCTCTCAACTGACCACTGGAACTGCAGAATTCGACCAGTCGAGTTGGTaGCACTTTCTCATGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SPDLFKGGSQLTTGTAEFDQSSW*HFLMLG Trigger: ACCCAACATGAGAAAGTGCCACCAACTCGACTGGTC...GAATTCTGCAGTTCCAGTGGTCAGTTGAGAGCCACCCTTGAACAGGTCAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR TCA 90 bp | TCTCCTGACCTGTTCAAGGGTGGCTCTCAACTGACCACTGGAACTGCAGAATTCCAACATCCCATTGGCTaGGCAGCAAAAATGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SPDLFKGGSQLTTGTAEFQHPIG*AAKMPE Trigger: TTCTGGCATTTTTGCTGCTCAGCCAATGGGATGTTG...GAATTCTGCAGTTCCAGTGGTCAGTTGAGAGCCACCCTTGAACAGGTCAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | CCTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGTGCTTCTGCCTCAGTTaGGTGGCAGAGAGCTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: PGGSDYTCRYDLVSPSGGCFCLS*VAESLV Trigger: AACTAAGCTCTCTGCCACCCAACTGAGGCAGAAGCA...CCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR TCA 90 bp | AGCAGAAGTGCTGCCAGCATAGAAGCCGTGCCTTTAAGGTCACACTCACGTACGACGATGCAGGTTTCCTaGATCATGATGACTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRSAASIEAVPLRSHSRTTMQVS*IMMTTN Trigger: GTTTGTAGTCATCATGATTCAGGAAACCTGCATCGT...CGTACGTGAGTGTGACCTTAAAGGCACGGCTTCTATGCTGGCAGCACTTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGTTGAAATGGCAGAGTTaGTCAGATCAAGCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSDYTCRYDLVSPSGGLLKWQS*SDQAEA Trigger: GGCCTCTGCTTGATCTGATCAACTCTGCCATTTCAA...CAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCCAATCAGCTGCTGACTGGATGGTGTaGCACGTACTGAAGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSDYTCRYDLVSPSQSAADWMV*HVLKVA Trigger: AGCGACCTTCAGTACGTGCCACACCATCCAGTCAGC...AGCTGATTGGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCACTACAAACAGCTCCTaGGCACCACCAATGACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVGVIIHVDMILCHPAEGTTNSS*APPMTK Trigger: TTTCGTCATTGGTGGTGCCCAGGAGCTGTTTGTAGT...GCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS-3UTR CCA 90 bp | GTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTGACGCCTTCAACATCCCATTaGCTGAGCAGCAAAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIIHVDMILCHPAEGWVTPSTSH*LSSKNA Trigger: GGCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGG...CGTCACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCACGATGCAGGTTTCCTaGATCATGATGACTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVGVIIHVDMILCHPAEGTMQVS*IMMTTN Trigger: GTTTGTAGTCATCATGATTCAGGAAACCTGCATCGT...GCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS-3UTR TCA 90 bp | GTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTGACGGACGAAACAAAACACTaGGGTTGCCGTAATACACAT | + |
|
Preference number: 4 (lower is better) Translates to: VIIHVDMILCHPAEGWVTDETKH*GCRNTH Trigger: ATGTGTATTACGGCAACCTCAGTGTTTTGTTTCGTC...CGTCACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR GCA 90 bp | AGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTGACGTAATCTGTCGGCAATaGGATCTCTGTACACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SDYTCRYDLVSPSGGLGDVICRQ*DLCTLT Trigger: AGTCAGTGTACAGAGATCGCATTGCCGACAGATTAC...GTCACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGATGAAGAATATGCAGATTGCCGCTTCCATACAGATGAGCAGGATCAGGTTGGACCAGTCGAGTTaGTGGCACTTTCTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKMKNMQIAASIQMSRIRLDQSS*WHFLML Trigger: CAACATGAGAAAGTGCCACCAACTCGACTGGTCCAA...CCTGATCCTGCTCATCTGTATGGAAGCGGCAATCTGCATATTCTTCATCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGGGTTCCAAGAAATACTGTTaGAATGGCAGAGTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSDYTCRYDLVSPSGGLGSKKYC*NGRVDQ Trigger: CTGATCAACTCTGCCATTTCAACAGTATTTCTTGGA...ACCCAGCCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCCAATCAGCTCAACATCCCATTGGCTaGGCAGCAAAAATGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGSDYTCRYDLVSPSQSAQHPIG*AAKMPE Trigger: TTCTGGCATTTTTGCTGCTCAGCCAATGGGATGTTG...AGCTGATTGGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCCAATCAGCTCCTTCAACATCCCATTaGCTGAGCAGCAAAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSDYTCRYDLVSPSQSAPSTSH*LSSKNA Trigger: GGCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGG...AGCTGATTGGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
||
| CDS-3UTR GCA 90 bp | TTAAGGAAGATGAAGAATATGCAGATTGCCGCTTCCATACAGATGAGCAGGATCGCTGAGCAGCAAAAATaGCAGAAGCTATCTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRKMKNMQIAASIQMSRIAEQQK*QKLSLN Trigger: ATTCAGAGATAGCTTCTGGCATTTTTGCTGCTCAGC...GATCCTGCTCATCTGTATGGAAGCGGCAATCTGCATATTCTTCATCTTCCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCCAATCAGCTGGCACTTTCTCATGTTaGGTGTATTTCTTTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGSDYTCRYDLVSPSQSAGTFSC*VYFFGN Trigger: ATTACCAAAGAAATACACCCAACATGAGAAAGTGCC...AGCTGATTGGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
||
| CDS CCA 90 bp | AAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTaGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVPGWLVSRVLKVPG*LVSRVLKVPGWLVS Trigger: GGACACCAGCCAGCCAGGGACCTTCAGTACCCGGGACACCAGCCAGCCAGGGACCTTCAGTACCCGGGACACCAGCCAGCCAGGGACCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS CCA 90 bp | AAGATTGCTGGCGGGATGGTGTTCCGGGTACTGAAGGTCCCTGGCTaGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGGCTGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KIAGGMVFRVLKVPG*LVSRVLKVPGWLVS Trigger: GGACACCAGCCAGCCAGGGACCTTCAGTACCCGGGACACCAGCCAGCCAGGGACCTTCAGTACCCGGAACACCATCCCGCCAGCAATCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS TCA 90 bp | GAAGGTCCCTGGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGTaGGGTGGAGCAGAGGCAGCATACGCCTGTGAATCCGAAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGPWLAGVPGTEGPW*GGAEAAYACESEGE Trigger: CTCACCTTCGGATTCACAGGCGTATGCTGCCTCTGCTCCACCTCACCAGGGACCTTCAGTACCCGGGACACCAGCCAGCCAGGGACCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS CCA 90 bp | ATAAAAGATTGCTGGCGGGATGGTGTTCCGGGTACTGAAGGTCCCTaGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IKDCWRDGVPGTEGP*LAGVPGTEGPWLAG Trigger: ACCAGCCAGCCAGGGACCTTCAGTACCCGGGACACCAGCCAGCCAGGGACCTTCAGTACCCGGAACACCATCCCGCCAGCAATCTTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CAA 90 bp | ACCGGTCCTAGCCAGGCCGCCCTCAAAAAGGAGTCCCAGGTTTGTGGCTGGCCTCTGCTTCTGCCTCAGTaGGGTGGCAGAGAGCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGPSQAALKKESQVCGWPLLLPQ*GGRELS Trigger: ACTAAGCTCTCTGCCACCCAACTGAGGCAGAAGCAG...AGGCCAGCCACAAACCTGGGACTCCTTTTTGAGGGCGGCCTGGCTAGGACCGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAGTCCCAGGTTTGTGGCTGGCCTTTGCTCCCACTCCCTGGGGTCCTTTTCACCTTCAACATCCCATaGGCTGAGCAGCAAAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: KESQVCGWPLLPLPGVLFTFNIP*AEQQKC Trigger: GCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGGT...GAAAAGGACCCCAGGGAGTGGGAGCAAAGGCCAGCCACAAACCTGGGACTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
||
| CDS CCA 90 bp | ATAAAAGATTGCTGGCGGATTGGTGTGGCACGTATAAAAGATTGCTaGCGGGATGGTGTTCCGGGTACTGAAGGTCCCTGGCTGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IKDCWRIGVARIKDC*RDGVPGTEGPWLAG Trigger: ACCAGCCAGCCAGGGACCTTCAGTACCCGGAACACCATCCCGCCAGCAATCTTTTATACGTGCCACACCAATCCGCCAGCAATCTTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS-3UTR CAA 90 bp | GGTCGTGTCCTCTCTGGGCTGACCTCCTCTGGGCCGAAATGGAAACTTTATCGGTCCTCAGCCTGTGCTTaGACGACTTCAGGTATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GRVLSGLTSSGPKWKLYRSSACA*TTSGIL Trigger: TAAGATACCTGAAGTCGTCAAAGCACAGGCTGAGGA...CCGATAAAGTTTCCATTTCGGCCCAGAGGAGGTCAGCCCAGAGAGGACACGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS GCA 90 bp | CAGGGAACTTTTCGCTTTGTTCCTCCTCTTCTCAGTAAACAGCAATaGATCGATGACACACAGGACTGCTGCCGAGAGGCACAGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGTFRFVPPLLSKQQ*IDDTQDCCREAQDP Trigger: GGGATCCTGTGCCTCTCGGCAGCAGTCCTGTGTGTCATCGATGCATTGCTGTTTACTGAGAAGAGGAGGAACAAAGCGAAAAGTTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CAA 90 bp | TCGTGTCCTCTCTGGGCTGACCTCCTCTGGGCCGAAATGGAAACTTTATCGGTGGTTGAAATGGCAGAGTaGATCAGATCAAGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCPLWADLLWAEMETLSVVEMAE*IRSSRG Trigger: GCCTCTGCTTGATCTGATCAACTCTGCCATTTCAAC...CACCGATAAAGTTTCCATTTCGGCCCAGAGGAGGTCAGCCCAGAGAGGACACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS-3UTR CAA 90 bp | CCTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGGGCTGCTTCTGCCTCAGTaGGGTGGCAGAGAGCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGGSDYTCRYDLVSPSGGLLLPQ*GGRELS Trigger: ACTAAGCTCTCTGCCACCCAACTGAGGCAGAAGCAG...CCCTCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS-3UTR CAA 90 bp | TTTCAAAGTAGTCTAGTGCAGAGATCATGCAGCCGTGGGCATGGGAGCTCCGTGACCTTCAACATCCCATaGGCTGAGCAGCAAAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: FQSSLVQRSCSRGHGSSVTFNIP*AEQQKC Trigger: GCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGGT...CACGGAGCTCCCATGCCCACGGCTGCATGATCTCTGCACTAGACTACTTTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| CDS GCA 90 bp | CACATCCTCAAGACCTTCAACATCCCATTGGCTGAGCAGCAAAAATaGCAGAAGCTATCTCTGAATCTTTTTGAGCGCTTGTCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HILKTFNIPLAEQQK*QKLSLNLFERLSWS Trigger: GGACCAGGACAAGCGCTCAAAAAGATTCAGAGATAGCTTCTGGCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGGTCTTGAGGATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS GCA 90 bp | ACCATCCTCAAGACCTTCAACATCCCATTGGCTGAGCAGCAAAAATaGCAGAAGCTATCTCTGAATCTTTTTGAGCGCTTGTCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TILKTFNIPLAEQQK*QKLSLNLFERLSWS Trigger: GGACCAGGACAAGCGCTCAAAAAGATTCAGAGATAGCTTCTGGCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGGTCTTGAGGATGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGTGGGAGTGATTATACATGTAGATATGATCTTGTGTCACCCAGCGGAGTTGAAATGGCAGAGTaGATCAGATCAAGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WPGGSDYTCRYDLVSPSGVEMAE*IRSSRG Trigger: GCCTCTGCTTGATCTGATCAACTCTGCCATTTCAAC...TCCGCTGGGTGACACAAGATCATATCTACATGTATAATCACTCCCACCAGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS TCA 90 bp | CTACTATACCAACTATTCCAAGAAATACTGTTGAAATGGCAGAGTTaGTCAGATCAAGCAGAGGCCAGTGGATACAGGCCATCGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLYQLFQEILLKWQS*SDQAEASGYRPSWF Trigger: AAACCACGATGGCCTGTATCCACTGGCCTCTGCTTGATCTGATCAACTCTGCCATTTCAACAGTATTTCTTGGAATAGTTGGTATAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS CCA 72 bp | GGCTGGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTaGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GWLVSRVLKVPG*LVSRVLKVPGW Trigger: CCAGCCAGGGACCTTCAGTACCCGGGACACCAGCCAGCCAGGGACCTTCAGTACCCGGGACACCAGCCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS CCA 72 bp | GGCGGGATGGTGTTCCGGGTACTGAAGGTCCCTGGCTaGCTGGTGTCCCGGGTACTGAAGGTCCCTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGMVFRVLKVPG*LVSRVLKVPGW Trigger: CCAGCCAGGGACCTTCAGTACCCGGGACACCAGCCAGCCAGGGACCTTCAGTACCCGGAACACCATCCCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS CCA 72 bp | GACTGGATGGTGTGGCACGTACTGAAGGTCGCTGACTaGATGGTGTGGCACGTACTGAAGGTCGCTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: DWMVWHVLKVAD*MVWHVLKVADW Trigger: CCAGTCAGCGACCTTCAGTACGTGCCACACCATCCAGTCAGCGACCTTCAGTACGTGCCACACCATCCAGTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 ENSMUST00000164175.2 |
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| CDS TCA 72 bp | GTGTGGCACGTACTGAAGGTCGCTGACTGGATGGTATaGCGTGTACTAAAGGTCGCTGGCTGGATGGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: VWHVLKVADWMV*RVLKVAGWMVW Trigger: CCATACCATCCAGCCAGCGACCTTTAGTACACGTCATACCATCCAGTCAGCGACCTTCAGTACGTGCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 ENSMUST00000164175.2 |
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| CDS CAA 90 bp | TGGGTGGCAGAGAGCTTAGTTTCCCTCGCCAGGGAACTTTTCGCTTaGTTCCTCCTCTTCTCAGTAAACAGCAATGCATCGATGACACAC | + |
|
Preference number: 6 (lower is better) Translates to: WVAESLVSLARELFA*FLLFSVNSNASMTH Trigger: GTGTGTCATCGATGCATTGCTGTTTACTGAGAAGAGGAGGAACAAAGCGAAAAGTTCCCTGGCGAGGGAAACTAAGCTCTCTGCCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS GCA 72 bp | TTTCGCTTTGTTCCTCCTCTTCTCAGTAAACAGCAATaGATCGATGACACACAGGACTGCTGCCGAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FRFVPPLLSKQQ*IDDTQDCCREA Trigger: TGCCTCTCGGCAGCAGTCCTGTGTGTCATCGATGCATTGCTGTTTACTGAGAAGAGGAGGAACAAAGCGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS CAA 72 bp | CTCCTGCTCACCATCCTCAAGACCTTCAACATCCCATaGGCTGAGCAGCAAAAATGCCAGAAGCTATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLTILKTFNIP*AEQQKCQKLSL Trigger: CAGAGATAGCTTCTGGCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGGTCTTGAGGATGGTGAGCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
||
| CDS TCA 72 bp | CATTGGCTGAGCAGCAAAAATGCCAGAAGCTATCTCTaGATCTTTTTGAGCGCTTGTCCTGGTCCTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HWLSSKNARSYL*IFLSACPGPQP Trigger: AGGCTGAGGACCAGGACAAGCGCTCAAAAAGATTCAGAGATAGCTTCTGGCATTTTTGCTGCTCAGCCAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000160596.8 ENSMUST00000164175.2 |
||
| CDS TCA 72 bp | CAGCTCCTGGGCACCACCAATGACGAAACAAAACACTaGGGTTGCCGTAATACACATCCTCAAGACCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QLLGTTNDETKH*GCRNTHPQDLQ Trigger: TTGAAGGTCTTGAGGATGTGTATTACGGCAACCTCAGTGTTTTGTTTCGTCATTGGTGGTGCCCAGGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
||
| CDS CCA 72 bp | CCTTGGACCAGTCGAGTTGGTGGCACTTTCTCATGTTaGGTGTATTTCTTTGGTAATCTGTCGGCAATGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PWTSRVGGTFSC*VYFFGNLSAMR Trigger: TCGCATTGCCGACAGATTACCAAAGAAATACACCCAACATGAGAAAGTGCCACCAACTCGACTGGTCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160596.8 ENSMUST00000164175.2 |
||
| CDS CAA 72 bp | GAGAGCTTAGTTTCCCTCGCCAGGGAACTTTTCGCTTaGTTCCTCCTCTTCTCAGTAAACAGCAATGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: ESLVSLARELFA*FLLFSVNSNAS Trigger: CGATGCATTGCTGTTTACTGAGAAGAGGAGGAACAAAGCGAAAAGTTCCCTGGCGAGGGAAACTAAGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS TCA 72 bp | GCTCACCATCCTCAAGACCTTCAACATCCCATTGGCTaGGCAGCAAAAATGCCAGAAGCTATCTCTGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: AHHPQDLQHPIG*AAKMPEAISES Trigger: AGATTCAGAGATAGCTTCTGGCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGGTCTTGAGGATGGTGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164175.2 |
||
| CDS CAA 72 bp | AAATGCCAGAAGCTATCTCTGAATCTTTTTGAGCGCTaGTCCTGGTCCTCAGCCTGTGCTTTGACGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KCQKLSLNLFER*SWSSACALTTS Trigger: TGAAGTCGTCAAAGCACAGGCTGAGGACCAGGACAAGCGCTCAAAAAGATTCAGAGATAGCTTCTGGCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160596.8 ENSMUST00000164175.2 |
||
| CDS CAA 72 bp | CCAACTATTCCAAGAAATACTGTTGAAATGGCAGAGTaGATCAGATCAAGCAGAGGCCAGTGGATACAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PTIPRNTVEMAE*IRSSRGQWIQA Trigger: GGCCTGTATCCACTGGCCTCTGCTTGATCTGATCAACTCTGCCATTTCAACAGTATTTCTTGGAATAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS CAA 72 bp | CTTTTTGAGCGCTTGTCCTGGTCCTCAGCCTGTGCTTaGACGACTTCAGGTATCTTAATTTTCTTAGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: LFERLSWSSACA*TTSGILIFLDP Trigger: AGGGTCTAAGAAAATTAAGATACCTGAAGTCGTCAAAGCACAGGCTGAGGACCAGGACAAGCGCTCAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160596.8 ENSMUST00000164175.2 |
||
| CDS TCA 72 bp | CAACTATTCCAAGAAATACTGTTGAAATGGCAGAGTTaGTCAGATCAAGCAGAGGCCAGTGGATACAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QLFQEILLKWQS*SDQAEASGYRP Trigger: TGGCCTGTATCCACTGGCCTCTGCTTGATCTGATCAACTCTGCCATTTCAACAGTATTTCTTGGAATAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
||
| CDS GCA 72 bp | AAGACCTTCAACATCCCATTGGCTGAGCAGCAAAAATaGCAGAAGCTATCTCTGAATCTTTTTGAGCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KTFNIPLAEQQK*QKLSLNLFERL Trigger: CAAGCGCTCAAAAAGATTCAGAGATAGCTTCTGGCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGGTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000160596.8 ENSMUST00000164175.2 |
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| CDS CCA 72 bp | TTGACGACTTCAGGTATCTTAATTTTCTTAGACCCTTaGACCAGTCGAGTTGGTGGCACTTTCTCATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LTTSGILIFLDP*TSRVGGTFSCW Trigger: CCAACATGAGAAAGTGCCACCAACTCGACTGGTCCAAGGGTCTAAGAAAATTAAGATACCTGAAGTCGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160596.8 ENSMUST00000164175.2 |
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| CDS CAA 90 bp | ACTACTATACCAACTATTCCAAGAAATACTGTTGAAATGGCAGAGTaGATCAGATCAAGCAGAGGCCAGTGGATACAGGCCATCGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TTIPTIPRNTVEMAE*IRSSRGQWIQAIVV Trigger: AACCACGATGGCCTGTATCCACTGGCCTCTGCTTGATCTGATCAACTCTGCCATTTCAACAGTATTTCTTGGAATAGTTGGTATAGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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| CDS TCA 72 bp | AATACACATCCTCAAGACCTTCAACATCCCATTGGCTaGGCAGCAAAAATGCCAGAAGCTATCTCTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: NTHPQDLQHPIG*AAKMPEAISES Trigger: AGATTCAGAGATAGCTTCTGGCATTTTTGCTGCTCAGCCAATGGGATGTTGAAGGTCTTGAGGATGTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160596.8 |
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| CDS CAA 72 bp | TTTGACGACTTCAGGTATCTTAATTTTCTTAGACCCTaGGACCAGTCGAGTTGGTGGCACTTTCTCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: FDDFRYLNFLRP*DQSSWWHFLML Trigger: CAACATGAGAAAGTGCCACCAACTCGACTGGTCCAAGGGTCTAAGAAAATTAAGATACCTGAAGTCGTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160596.8 ENSMUST00000164175.2 |
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| CDS TCA 72 bp | AATGACTACTATACCAACTATTCCAAGAAATACTGTTaGAATGGCAGAGTTGATCAGATCAAGCAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: NDYYTNYSKKYC*NGRVDQIKQRP Trigger: TGGCCTCTGCTTGATCTGATCAACTCTGCCATTTCAACAGTATTTCTTGGAATAGTTGGTATAGTAGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159039.2 ENSMUST00000160596.8 |
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