Pregenerated sensors for CMKLR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042190Ensembl transcript IDs: ENSMUST00000047936.13, ENSMUST00000132065.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCAGGGGAGGAAAGCCTGATCCTGGGCTGCCCACGGGGCTGTTaGTACATTCAAGGAGGACTCGGGAAAGCTGGTCAGCTGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LPGEESLILGCPRGC*YIQGGLGKAGQLPR Trigger: TCTGGGCAGCTGACCAGCTTTCCCGAGTCCTCCTTGAATGTATCAACAGCCCCGTGGGCAGCCCAGGATCAGGCTTTCCTCCCCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR TCA 90 bp | ACATGCATGGGACATGCTAACGAAGTGCACACCACCCCTCCTCCATaGGGAATGATGTCAAGCCAGACGGAGCAGGGCTCGGGTCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: TCMGHANEVHTTPPP*GMMSSQTEQGSGLL Trigger: CAAAAGACCCGAGCCCTGCTCCGTCTGGCTTGACATCATTCCTCATGGAGGAGGGGTGGTGTGCACTTCGTTAGCATGTCCCATGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 90 bp | GACTGCGCAGCATGTTCAGGGCATGCACGGCGACATCGTGTATGTTaGCCTGTATGTTGGTCACAGCTCAAGTCTTGGCTTCAGAGATGC | + |
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Preference number: 1 (lower is better) Translates to: DCAACSGHARRHRVC*PVCWSQLKSWLQRC Trigger: GCATCTCTGAAGCCAAGACTTGAGCTGTGACCAACATACAGGCCAACATACACGATGTCGCCGTGCATGCCCTGAACATGCTGCGCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 90 bp | GCCAAGCCCACTGCGATTCGAATCCAGTCTCTACCAACATCTAACTaGGTCCCCTCGGGCCAGTTGCTTAACCTCTCTGAGTCTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: AKPTAIRIQSLPTSN*VPSGQLLNLSESLL Trigger: AAGCAGAGACTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGTTAGATGTTGGTAGAGACTGGATTCGAATCGCAGTGGGCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR GCA 90 bp | CATGATGGTGTAAGATATCCTGTACCCACATCCTTTGGGATTCTCTaGTCTCCGTCTCCTCCTCTTTACCACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: HDGVRYPVPTSFGIL*SPSPPLYHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGGTAAAGAGGAGGAGACGGAGAGCAGAGAATCCCAAAGGATGTGGGTACAGGATATCTTACACCATCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 90 bp | CCAAAGTCAAGGTCTTGGAGGATGTTGGGGTGTAGTGGGCTTTGTTaGTTTGACTGTCATGTTGCCATAACAGGTCTGCAATGGGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: PKSRSWRMLGCSGLC*FDCHVAITGLQWVC Trigger: GCAAACCCATTGCAGACCTGTTATGGCAACATGACAGTCAAACCAACAAAGCCCACTACACCCCAACATCCTCCAAGACCTTGACTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 90 bp | CCTGCCAGGGGAGGAAAGCCTGATCCTGGGCTGCCCACGGGGCTGTaGATACATTCAAGGAGGACTCGGGAAAGCTGGTCAGCTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PARGGKPDPGLPTGL*IHSRRTRESWSAAQ Trigger: CTGGGCAGCTGACCAGCTTTCCCGAGTCCTCCTTGAATGTATCAACAGCCCCGTGGGCAGCCCAGGATCAGGCTTTCCTCCCCTGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCTGCTCCTGTTGTAGAGGCTCGGGTTGCTTGCCTGCCATTTTACTGGAAGTCCCTAGGCGTCCCTaGGCCGTGGCACCTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VPCSCCRGSGCLPAILLEVPRRP*AVAPLG Trigger: CCCCAAAGGTGCCACGGCCCAGGGACGCCTAGGGAC...TTCCAGTAAAATGGCAGGCAAGCAACCCGAGCCTCTACAACAGGAGCAGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAGAGATGCTCCCTTTTCTGAGTCAGTCACAGTCGGTCCCCTGCTCCTGTGGCGTCCCTGGGCCGTaGCACCTTTGGGGGACATTC | + |
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Preference number: 2 (lower is better) Translates to: ASEMLPFLSQSQSVPCSCGVPGP*HLWGTF Trigger: GAATGTCCCCCAAAGGTGCCACGGCCCAGGGACGCC...ACAGGAGCAGGGGACCGACTGTGACTGACTCAGAAAAGGGAGCATCTCTGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAGAGATGCTCCCTTTTCTGAGTCAGTCACAGTCGGTCCCCTGCTCCTGTGGGCCGTGGCACCTTTaGGGGACATTCCCAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ASEMLPFLSQSQSVPCSCGPWHL*GTFPGE Trigger: CTCACCTGGGAATGTCCCCCAAAGGTGCCACGGCCC...ACAGGAGCAGGGGACCGACTGTGACTGACTCAGAAAAGGGAGCATCTCTGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACAGAACCCTGTGTaGCCCTTGCAAAGTTCCATGAAGCCCCTCAGGTCCTCGTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTQNPV*PLQSSMKPLRSSFP Trigger: GGGGAACGAGGACCTGAGGGGCTTCATGGAACTTTGCAAGGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 90 bp | ACTCGGGAAAGCTGGTCAGCTGCCCAGATGACCAGCCAGACAGCCTaGGGAAGACACTCTGAAGATGGAGTCCCAAAACTCCGTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: TRESWSAAQMTSQTA*GRHSEDGVPKLRSR Trigger: TCTAGAACGGAGTTTTGGGACTCCATCTTCAGAGTGTCTTCCCAAGGCTGTCTGGCTGGTCATCTGGGCAGCTGACCAGCTTTCCCGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGTCCCCTCGGGCCAGTTGCTTAACCTCTCTGAGTCTCTGCTTGTCCTCATCCTTTGGGATTCTCTaGTCTCCGTCTCCTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TGSPRASCLTSLSLCLSSSFGIL*SPSPPL Trigger: AAGAGGAGGAGACGGAGAGCAGAGAATCCCAAAGGA...TGAGGACAAGCAGAGACTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTCCCCTCGGGCCAGTTGCTTAACCTCTCTGAGTCTCTGCTTGTCCTCATGTTGGCCTGTATGTTaGTCACAGCTCAAGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: TGSPRASCLTSLSLCLSSCWPVC*SQLKSW Trigger: CCAAGACTTGAGCTGTGACCAACATACAGGCCAACA...TGAGGACAAGCAGAGACTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCCCCTCGGGTTGCTTGCCTaGCATTTTACTGGAAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTQNPVLPLGLLA*HFTGRV Trigger: CACTCTTCCAGTAAAATGGCAGGCAAGCAACCCGAG...GGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | TTGATACATTCAAGGAGGACTCGGGAAAGCTGGTCAGCTGCCCAGATGACCAGCGGTCTTGGAGGATGTTaGGGTGTAGTGGGCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LIHSRRTRESWSAAQMTSGLGGC*GVVGFV Trigger: AACAAAGCCCACTACACCCCAACATCCTCCAAGACC...GCTGGTCATCTGGGCAGCTGACCAGCTTTCCCGAGTCCTCCTTGAATGTATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR TCA 90 bp | TCCGTTCTAGACCAGTCTCTGGGACATTCTAAGCCCTTTTTCCAGCCAGCATTGAGATGCTCCCTTTTCTaGGTCAGTCACAGTCGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SVLDQSLGHSKPFFQPALRCSLF*VSHSRS Trigger: GGACCGACTGTGACTGACTCAGAAAAGGGAGCATCT...CAATGCTGGCTGGAAAAAGGGCTTAGAATGTCCCAGAGACTGGTCTAGAACGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR TCA 90 bp | TTGATACATTCAAGGAGGACTCGGGAAAGCTGGTCAGCTGCCCAGATGACCAGCAGTGAGTATACACACTaGAGCAAAGAGCTGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: LIHSRRTRESWSAAQMTSSEYTH*SKELPP Trigger: TGGTGGCAGCTCTTTGCTTCAGTGTGTATACTCACT...GCTGGTCATCTGGGCAGCTGACCAGCTTTCCCGAGTCCTCCTTGAATGTATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR GCA 90 bp | TCCGTTCTAGACCAGTCTCTGGGACATTCTAAGCCCTTTTTCCAGCCAGCATTGACTGAAGCAAAGAGCTaGCACCACCTGAACCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SVLDQSLGHSKPFFQPALTEAKS*HHLNPQ Trigger: TTGGGGGTTCAGGTGGTGGCAGCTCTTTGCTTCAGT...CAATGCTGGCTGGAAAAAGGGCTTAGAATGTCCCAGAGACTGGTCTAGAACGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCCCCCAAAGTCAAGGTCTTaGAGGATGTTGGGGTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTQNPVLPPKSRS*RMLGCS Trigger: ACTACACCCCAACATCCTCCAAGACCTTGACTTTGG...GGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | TTGATACATTCAAGGAGGACTCGGGAAAGCTGGTCAGCTGCCCAGATGACCAGCAAGAGTGTCCACACTTaGGAACCCCACTTAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: LIHSRRTRESWSAAQMTSKSVHT*EPHLKH Trigger: ATGTTTTAAGTGGGGTTCCCAAGTGTGGACACTCTT...GCTGGTCATCTGGGCAGCTGACCAGCTTTCCCGAGTCCTCCTTGAATGTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTCTAGACCAGTCTCTGGGACATTCTAAGCCCTTTTTCCAGCCAGCATTGTGCCTGCCATTTTACTaGAAGAGTGTCCACACTTGG | + |
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Preference number: 2 (lower is better) Translates to: SVLDQSLGHSKPFFQPALCLPFY*KSVHTW Trigger: CCAAGTGTGGACACTCTTCCAGTAAAATGGCAGGCA...CAATGCTGGCTGGAAAAAGGGCTTAGAATGTCCCAGAGACTGGTCTAGAACGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCTGTAGTGGGCTTTGTTaGTTTGACTGTCATGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTHRTLCCCSGLC*FDCHVA Trigger: GGCAACATGACAGTCAAACCAACAAAGCCCACTACA...GCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR TCA 90 bp | TCCGTTCTAGACCAGTCTCTGGGACATTCTAAGCCCTTTTTCCAGCCAGCATTGGGGTTCAGTGCTAAGTaGGTATACACACTGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SVLDQSLGHSKPFFQPALGFSAK*VYTLKQ Trigger: TTGCTTCAGTGTGTATACTCACTTAGCACTGAACCC...CAATGCTGGCTGGAAAAAGGGCTTAGAATGTCCCAGAGACTGGTCTAGAACGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR TCA 72 bp | CAAGGAGGACTCGGGAAAGCTGGTCAGCTGCCCAGATaGCCAGCCAGACAGCCTTGGGAAGACACTCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: QGGLGKAGQLPR*PARQPWEDTLK Trigger: CTTCAGAGTGTCTTCCCAAGGCTGTCTGGCTGGTCATCTGGGCAGCTGACCAGCTTTCCCGAGTCCTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR TCA 72 bp | GAGGAAAGCCTGATCCTGGGCTGCCCACGGGGCTGTTaGTACATTCAAGGAGGACTCGGGAAAGCTGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: EESLILGCPRGC*YIQGGLGKAGQ Trigger: CTGACCAGCTTTCCCGAGTCCTCCTTGAATGTATCAACAGCCCCGTGGGCAGCCCAGGATCAGGCTTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR GCA 72 bp | ATGCTCCCTTTTCTGAGTCAGTCACAGTCGGTCCCCTaGTCCTGTTGTAGAGGCTCGGGTTGCTTGCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: MLPFLSQSQSVP*SCCRGSGCLPA Trigger: GGCAGGCAAGCAACCCGAGCCTCTACAACAGGAGCAGGGGACCGACTGTGACTGACTCAGAAAAGGGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR GCA 72 bp | CAGTCGGTCCCCTGCTCCTGTTGTAGAGGCTCGGGTTaGTTGCCTGCCATTTTACTGGAAGAGTGTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: QSVPCSCCRGSG*LPAILLEECPH Trigger: GTGTGGACACTCTTCCAGTAAAATGGCAGGCAAGCAACCCGAGCCTCTACAACAGGAGCAGGGGACCGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR GCA 72 bp | GATACATTCAAGGAGGACTCGGGAAAGCTGGTCAGCTaGCCAGATGACCAGCCAGACAGCCTTGGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: DTFKEDSGKLVS*PDDQPDSLGKT Trigger: TGTCTTCCCAAGGCTGTCTGGCTGGTCATCTGGGCAGCTGACCAGCTTTCCCGAGTCCTCCTTGAATGTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 72 bp | AAACATGAGCCGCCTTGTGCAAAATTCAGTGGGCATTaGAGCATTCCCAAAGGCTCCCGGCATGTCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: KHEPPCAKFSGH*SIPKGSRHVSH Trigger: GTGGGAGACATGCCGGGAGCCTTTGGGAATGCTCCAATGCCCACTGAATTTTGCACAAGGCGGCTCATGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGTCCCCTCGGGCCAGTTGCTTAACCTCTCTGAGTCTCTGCTTGTCCTCAAAAATTCAGTGGGCATaGGAGCATTCCCAAAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: TGSPRASCLTSLSLCLSSKIQWA*EHSQRL Trigger: GAGCCTTTGGGAATGCTCCAATGCCCACTGAATTTT...TGAGGACAAGCAGAGACTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGTCCCCTCGGGCCAGTTGCTTAACCTCTCTGAGTCTCTGCTTGTCCTCAATGTTGGCCTGTATGTaGGTCACAGCTCAAGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: TGSPRASCLTSLSLCLSSMLACM*VTAQVL Trigger: CAAGACTTGAGCTGTGACCAACATACAGGCCAACAT...TGAGGACAAGCAGAGACTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR TCA 72 bp | CAGCTCAAGTCTTGGCTTCAGAGATGCTCCCTTTTCTaGGTCAGTCACAGTCGGTCCCCTGCTCCTGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: QLKSWLQRCSLF*VSHSRSPAPVV Trigger: TACAACAGGAGCAGGGGACCGACTGTGACTGACTCAGAAAAGGGAGCATCTCTGAAGCCAAGACTTGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR GCA 72 bp | CTCTACCAACATCTAACTGGGTCCCCTCGGGCCAGTTaGTTAACCTCTCTGAGTCTCTGCTTGTCCTCATAC | + |
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Preference number: 3 (lower is better) Translates to: LYQHLTGSPRAS*LTSLSLCLSSY Trigger: GTATGAGGACAAGCAGAGACTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGTTAGATGTTGGTAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 72 bp | CATGCACGGCGACATCGTGTATGTTGGCCTGTATGTTaGTCACAGCTCAAGTCTTGGCTTCAGAGATGCTCC | + |
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Preference number: 3 (lower is better) Translates to: HARRHRVCWPVC*SQLKSWLQRCS Trigger: GGAGCATCTCTGAAGCCAAGACTTGAGCTGTGACCAACATACAGGCCAACATACACGATGTCGCCGTGCATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 72 bp | GCATGTTCAGGGCATGCACGGCGACATCGTGTATGTTaGCCTGTATGTTGGTCACAGCTCAAGTCTTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: ACSGHARRHRVC*PVCWSQLKSWL Trigger: AAGCCAAGACTTGAGCTGTGACCAACATACAGGCCAACATACACGATGTCGCCGTGCATGCCCTGAACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 72 bp | ACTGCGATTCGAATCCAGTCTCTACCAACATCTAACTaGGTCCCCTCGGGCCAGTTGCTTAACCTCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: TAIRIQSLPTSN*VPSGQLLNLSE Trigger: CTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGTTAGATGTTGGTAGAGACTGGATTCGAATCGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 72 bp | GTTGTAGAGGCTCGGGTTGCTTGCCTGCCATTTTACTaGAAGAGTGTCCACACTTGGGAACCCCACTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: VVEARVACLPFY*KSVHTWEPHLK Trigger: TTTTAAGTGGGGTTCCCAAGTGTGGACACTCTTCCAGTAAAATGGCAGGCAAGCAACCCGAGCCTCTACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR-3UTR CAA 90 bp | TCTGAAATCCAAAGTCAAGGTCTTGGAGGATGTTGGGGTGTAGTGGGCTTTGTTAGAGGCTCGGGTTGCTaGCCTGCCATTTTACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: SEIQSQGLGGCWGVVGFVRGSGC*PAILLE Trigger: TTCCAGTAAAATGGCAGGCAAGCAACCCGAGCCTCT...AACAAAGCCCACTACACCCCAACATCCTCCAAGACCTTGACTTTGGATTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR GCA 72 bp | GTAAGATATCCTGTACCCACATCCTTTGGGATTCTCTaGTCTCCGTCTCCTCCTCTTTACCACACACACACA | + |
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Preference number: 3 (lower is better) Translates to: VRYPVPTSFGIL*SPSPPLYHTHT Trigger: TGTGTGTGTGTGGTAAAGAGGAGGAGACGGAGAGCAGAGAATCCCAAAGGATGTGGGTACAGGATATCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 72 bp | AGGTCTTGGAGGATGTTGGGGTGTAGTGGGCTTTGTTaGTTTGACTGTCATGTTGCCATAACAGGTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: RSWRMLGCSGLC*FDCHVAITGLQ Trigger: TTGCAGACCTGTTATGGCAACATGACAGTCAAACCAACAAAGCCCACTACACCCCAACATCCTCCAAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CCA 72 bp | TCTTCTGAAATCCAAAGTCAAGGTCTTGGAGGATGTTaGGGTGTAGTGGGCTTTGTTGGTTTGACTGTCATG | + |
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Preference number: 3 (lower is better) Translates to: SSEIQSQGLGGC*GVVGFVGLTVM Trigger: CATGACAGTCAAACCAACAAAGCCCACTACACCCCAACATCCTCCAAGACCTTGACTTTGGATTTCAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | GTCCCCTGCTCCTGTTGTAGAGGCTCGGGTTGCTTGCCTGCCATTTTACTGGAACGAGTGGGCGGGATGTaGGGAGGACTCAGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: VPCSCCRGSGCLPAILLERVGGM*GGLRRG Trigger: GCCGCGCCTGAGTCCTCCCCACATCCCGCCCACTCG...TTCCAGTAAAATGGCAGGCAAGCAACCCGAGCCTCTACAACAGGAGCAGGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR TCA 90 bp | TTTCTGAGTCAGTCACAGTCGGTCCCCTGCTCCTGTTGTAGAGGCTCGGGTTGCGGGGTAGCCCCAGGCTaGAGACAGAGCTTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: FLSQSQSVPCSCCRGSGCGVAPG*RQSLAQ Trigger: CTGTGCCAAGCTCTGTCTTCAGCCTGGGGCTACCCC...GCAACCCGAGCCTCTACAACAGGAGCAGGGGACCGACTGTGACTGACTCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCTGCAGCTGTTGGCGATaGCGACGGCCGTGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTHRTLCCCSCWR*RRPWPG Trigger: CCCTGGCCACGGCCGTCGCCATCGCCAACAGCTGCA...GCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCCCATGCTGCGGTGGTTCTaGGACCAGACGGGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTQNPVLPMLRWF*DQTGSS Trigger: GCTGCTCCCCGTCTGGTCCCAGAACCACCGCAGCAT...GGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 72 bp | GGAGGAAAGCCTGATCCTGGGCTGCCCACGGGGCTGTaGATACATTCAAGGAGGACTCGGGAAAGCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GGKPDPGLPTGL*IHSRRTRESWS Trigger: TGACCAGCTTTCCCGAGTCCTCCTTGAATGTATCAACAGCCCCGTGGGCAGCCCAGGATCAGGCTTTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR GCA 90 bp | TTTCTGAGTCAGTCACAGTCGGTCCCCTGCTCCTGTTGTAGAGGCTCGGGTTGCACAGAATGGGGTTCATaGAGCTGTTGGCGATGGCGA | + |
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Preference number: 4 (lower is better) Translates to: FLSQSQSVPCSCCRGSGCTEWGS*SCWRWR Trigger: TCGCCATCGCCAACAGCTGCATGAACCCCATTCTGT...GCAACCCGAGCCTCTACAACAGGAGCAGGGGACCGACTGTGACTGACTCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | ATGTTGGCCTGTATGTTGGTCACAGCTCAAGTCTTGGCTTCAGAGATGCTCCCTGGTTCATGCAGCTGTTaGCGATGGCGACGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLACMLVTAQVLASEMLPGSCSC*RWRRPW Trigger: CCACGGCCGTCGCCATCGCCAACAGCTGCATGAACC...AGGGAGCATCTCTGAAGCCAAGACTTGAGCTGTGACCAACATACAGGCCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 72 bp | AGCTGGTCAGCTGCCCAGATGACCAGCCAGACAGCCTaGGGAAGACACTCTGAAGATGGAGTCCCAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SWSAAQMTSQTA*GRHSEDGVPKL Trigger: GAGTTTTGGGACTCCATCTTCAGAGTGTCTTCCCAAGGCTGTCTGGCTGGTCATCTGGGCAGCTGACCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | TCTGAAATCCAAAGTCAAGGTCTTGGAGGATGTTGGGGTGTAGTGGGCTTTGTTAGGCGGATGCTGCGGTaGTTCTGGGACCAGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEIQSQGLGGCWGVVGFVRRMLR*FWDQTG Trigger: CCCCGTCTGGTCCCAGAACCACCGCAGCATCCGCCT...AACAAAGCCCACTACACCCCAACATCCTCCAAGACCTTGACTTTGGATTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | ACTGGGTCCCCTCGGGCCAGTTGCTTAACCTCTCTGAGTCTCTGCTTGTCCTCATCTTCCCATGAATGTTaGCGGTGTCCCGGAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TGSPRASCLTSLSLCLSSSSHEC*RCPGRQ Trigger: TTGTCTTCCGGGACACCGCCAACATTCATGGGAAGA...TGAGGACAAGCAGAGACTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 72 bp | CACACACACACACACACACAGAACCCTGTGTTGCCCTaGCAAAGTTCCATGAAGCCCCTCAGGTCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTQNPVLP*QSSMKPLRSSF Trigger: GAACGAGGACCTGAGGGGCTTCATGGAACTTTGCAAGGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 72 bp | CACACACACACACACACACACACACAGAACCCTGTGTaGCCCTTGCAAAGTTCCATGAAGCCCCTCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTQNPV*PLQSSMKPLRS Trigger: GGACCTGAGGGGCTTCATGGAACTTTGCAAGGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR TCA 90 bp | GTCCCCTGCTCCTGTTGTAGAGGCTCGGGTTGCTTGCCTGCCATTTTACTGGAATCGGCAAAAAGATGTTaGACAGGAAGTCGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VPCSCCRGSGCLPAILLESAKRC*TGSRPQ Trigger: CTGTGGCCGACTTCCTGTTCAACATCTTTTTGCCGA...TTCCAGTAAAATGGCAGGCAAGCAACCCGAGCCTCTACAACAGGAGCAGGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCCCGTCTGCTGTACCCTGTaGAAACTACTTGCGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTQNPVLPVCCTL*KLLASG Trigger: CCCACTCGCAAGTAGTTTCCACAGGGTACAGCAGAC...GGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 72 bp | GCATGCACGGCGACATCGTGTATGTTGGCCTGTATGTaGGTCACAGCTCAAGTCTTGGCTTCAGAGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACTATSCMLACM*VTAQVLASEML Trigger: GAGCATCTCTGAAGCCAAGACTTGAGCTGTGACCAACATACAGGCCAACATACACGATGTCGCCGTGCATGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | ATGTTGGCCTGTATGTTGGTCACAGCTCAAGTCTTGGCTTCAGAGATGCTCCCTGCTGAAGACAGAGCTTaGCACAGCTGTGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MLACMLVTAQVLASEMLPAEDRA*HSCVVE Trigger: CTCCACCACACAGCTGTGCCAAGCTCTGTCTTCAGC...AGGGAGCATCTCTGAAGCCAAGACTTGAGCTGTGACCAACATACAGGCCAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR GCA 90 bp | TCTGAAATCCAAAGTCAAGGTCTTGGAGGATGTTGGGGTGTAGTGGGCTTTGTTGCCAGGCGGTTGCGCTaGAGCTTGAAGACGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SEIQSQGLGGCWGVVGFVARRLR*SLKTMV Trigger: TACCATCGTCTTCAAGCTGCAGCGCAACCGCCTGGC...AACAAAGCCCACTACACCCCAACATCCTCCAAGACCTTGACTTTGGATTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CCA 90 bp | TCTGAAATCCAAAGTCAAGGTCTTGGAGGATGTTGGGGTGTAGTGGGCTTTGTTAGGGCTTCTTGTTCTTaGCCAGGCGGTTGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEIQSQGLGGCWGVVGFVRASCS*PGGCAA Trigger: TGCAGCGCAACCGCCTGGCCAAGAACAAGAAGCCCT...AACAAAGCCCACTACACCCCAACATCCTCCAAGACCTTGACTTTGGATTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| 3UTR CAA 72 bp | TGTATGTTGGCCTGTATGTTGGTCACAGCTCAAGTCTaGGCTTCAGAGATGCTCCCTTTTCTGAGTCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CMLACMLVTAQV*ASEMLPFLSQS Trigger: TGACTGACTCAGAAAAGGGAGCATCTCTGAAGCCAAGACTTGAGCTGTGACCAACATACAGGCCAACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS GCA 90 bp | GTGACAGTGACCGCCACGTGTCTGCTGTACCCTGTGGAAACTACTTaGGAGTGGGCGGGATGTGGGGAGGACTCAGGCGCGGCCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTVTATCLLYPVETT*EWAGCGEDSGAAKL Trigger: CAGCTTGGCCGCGCCTGAGTCCTCCCCACATCCCGCCCACTCGCAAGTAGTTTCCACAGGGTACAGCAGACACGTGGCGGTCACTGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CCA 90 bp | AGCACACCAAGCTGTAGATCACCACCAGGAAGACCGGGGCCACCTTaGCCTCCCACGGACTCGCCTCCTCCAAGTCCACAAAGTAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: STPSCRSPPGRPGPP*PPTDSPPPSPQSSQ Trigger: TTGGCTACTTTGTGGACTTGGAGGAGGCGAGTCCGTGGGAGGCCAAGGTGGCCCCGGTCTTCCTGGTGGTGATCTACAGCTTGGTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS-3UTR CAA 90 bp | GCTTCAGAGATGCTCCCTTTTCTGAGTCAGTCACAGTCGGTCCCCTGCTCCTGTGGGTTCATGCAGCTGTaGGCGATGGCGACGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASEMLPFLSQSQSVPCSCGFMQL*AMATAV Trigger: CACGGCCGTCGCCATCGCCAACAGCTGCATGAACCC...ACAGGAGCAGGGGACCGACTGTGACTGACTCAGAAAAGGGAGCATCTCTGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS CCA 90 bp | GTGTCTGCTGTACCCTGTGGAAACTACTTGCGAGTGGGCGGGATGTaGGGAGGACTCAGGCGCGGCCAAGCTGAAGTTGTTGAAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSAVPCGNYLRVGGM*GGLRRGQAEVVEAG Trigger: ACCTGCTTCAACAACTTCAGCTTGGCCGCGCCTGAGTCCTCCCCACATCCCGCCCACTCGCAAGTAGTTTCCACAGGGTACAGCAGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCTCCTCACTCAGGGCGTaGGCCAGGCGGGAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTHRTLCCSSLRA*ARREKR Trigger: CCTCTTCTCCCGCCTGGCCAACGCCCTGAGTGAGGA...GCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS TCA 90 bp | TCAGGCGCGGCCAAGCTGAAGTTGTTGAAGCAGGTTATCTTCCCATaGATGTTGGCGGTGTCCCGGAAGACAAGGGACGGGGAGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGAAKLKLLKQVIFP*MLAVSRKTRDGELK Trigger: CTTGAGCTCCCCGTCCCTTGTCTTCCGGGACACCGCCAACATTCATGGGAAGATAACCTGCTTCAACAACTTCAGCTTGGCCGCGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCCCAAGGGCTTCTTGTTCTaGGCCAGGCGGTTGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTQNPVLPKGFLF*ARRLRC Trigger: GCAGCGCAACCGCCTGGCCAAGAACAAGAAGCCCTT...GGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCCCACAATCACCAGGCCGTaGCCTAGGAGACCGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTQNPVLPTITRP*PRRPRK Trigger: CTTCCTCGGTCTCCTAGGCAACGGCCTGGTGATTGT...GGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCTTCTTGGCCAGGCGGTaGCGCTGCAGCTTGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTHRTLCCFLARR*RCSLKT Trigger: CGTCTTCAAGCTGCAGCGCAACCGCCTGGCCAAGAA...GCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | ACTGGGTCCCCTCGGGCCAGTTGCTTAACCTCTCTGAGTCTCTGCTTGTCCTCAAAGAAGTTGCTGATCTaGCACATGGCCTTCCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGSPRASCLTSLSLCLSSKKLLI*HMAFPN Trigger: GTTCGGGAAGGCCATGTGCAAGATCAGCAACTTCTT...TGAGGACAAGCAGAGACTCAGAGAGGTTAAGCAACTGGCCCGAGGGGACCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | GTCCCCTGCTCCTGTTGTAGAGGCTCGGGTTGCTTGCCTGCCATTTTACTGGAAGAGAAGAGGGCCACCTaGAATTTTCTGAAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPCSCCRGSGCLPAILLEEKRAT*NFLKSW Trigger: CCACGACTTCAGAAAATTCAAGGTGGCCCTCTTCTC...TTCCAGTAAAATGGCAGGCAAGCAACCCGAGCCTCTACAACAGGAGCAGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | ATGTTGGCCTGTATGTTGGTCACAGCTCAAGTCTTGGCTTCAGAGATGCTCCCTTCGGCCACAGCCAGGTaGACAAACCACACAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MLACMLVTAQVLASEMLPSATAR*TNHTVF Trigger: GAACACTGTGTGGTTTGTCAACCTGGCTGTGGCCGA...AGGGAGCATCTCTGAAGCCAAGACTTGAGCTGTGACCAACATACAGGCCAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | GTCCCCTGCTCCTGTTGTAGAGGCTCGGGTTGCTTGCCTGCCATTTTACTGGAAGCCAAGCTGAAGTTGTaGAAGCAGGTTATCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPCSCCRGSGCLPAILLEAKLKL*KQVIFP Trigger: TGGGAAGATAACCTGCTTCAACAACTTCAGCTTGGC...TTCCAGTAAAATGGCAGGCAAGCAACCCGAGCCTCTACAACAGGAGCAGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACAGAACCCTGTGTTGCCCACGGTCTTCTTCATCTaGAAGGTGGCGATGACAATC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTQNPVLPTVFFI*KVAMTI Trigger: GATTGTCATCGCCACCTTCAAGATGAAGAAGACCGT...GGGCAACACAGGGTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | TCCGTTCTAGACCAGTCTCTGGGACATTCTAAGCCCTTTTTCCAGCCAGCATTGATCTTGAAGGGCTTCTaGTTCTTGGCCAGGCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVLDQSLGHSKPFFQPALILKGF*FLARRL Trigger: CAACCGCCTGGCCAAGAACAAGAAGCCCTTCAAGAT...CAATGCTGGCTGGAAAAAGGGCTTAGAATGTCCCAGAGACTGGTCTAGAACGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | TCTGAAATCCAAAGTCAAGGTCTTGGAGGATGTTGGGGTGTAGTGGGCTTTGTTTGGCTGAGCAAGAAGTaGCTGATCTTGCACATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SEIQSQGLGGCWGVVGFVWLSKK*LILHMA Trigger: GGCCATGTGCAAGATCAGCAACTTCTTGCTCAGCCA...AACAAAGCCCACTACACCCCAACATCCTCCAAGACCTTGACTTTGGATTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS-3UTR CAA 90 bp | TTGATACATTCAAGGAGGACTCGGGAAAGCTGGTCAGCTGCCCAGATGACCAGCATGGTGATAATGATCTaGAAGGGCTTCTTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIHSRRTRESWSAAQMTSMVIMI*KGFLFL Trigger: CAAGAACAAGAAGCCCTTCAAGATCATTATCACCAT...GCTGGTCATCTGGGCAGCTGACCAGCTTTCCCGAGTCCTCCTTGAATGTATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS GCA 72 bp | ACCGCCACGTGTCTGCTGTACCCTGTGGAAACTACTTaGGAGTGGGCGGGATGTGGGGAGGACTCAGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TATCLLYPVETT*EWAGCGEDSGA Trigger: CGCGCCTGAGTCCTCCCCACATCCCGCCCACTCGCAAGTAGTTTCCACAGGGTACAGCAGACACGTGGCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CAA 72 bp | GACCGCCACGTGTCTGCTGTACCCTGTGGAAACTACTaGCGAGTGGGCGGGATGTGGGGAGGACTCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DRHVSAVPCGNY*RVGGMWGGLRR Trigger: GCGCCTGAGTCCTCCCCACATCCCGCCCACTCGCAAGTAGTTTCCACAGGGTACAGCAGACACGTGGCGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CAA 90 bp | GGTGACAGTGACCGCCACGTGTCTGCTGTACCCTGTGGAAACTACTaGCGAGTGGGCGGGATGTGGGGAGGACTCAGGCGCGGCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GDSDRHVSAVPCGNY*RVGGMWGGLRRGQA Trigger: AGCTTGGCCGCGCCTGAGTCCTCCCCACATCCCGCCCACTCGCAAGTAGTTTCCACAGGGTACAGCAGACACGTGGCGGTCACTGTCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CCA 72 bp | AGCTGTAGATCACCACCAGGAAGACCGGGGCCACCTTaGCCTCCCACGGACTCGCCTCCTCCAAGTCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SCRSPPGRPGPP*PPTDSPPPSPQ Trigger: TTGTGGACTTGGAGGAGGCGAGTCCGTGGGAGGCCAAGGTGGCCCCGGTCTTCCTGGTGGTGATCTACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CCA 72 bp | ACGTGTCTGCTGTACCCTGTGGAAACTACTTGCGAGTaGGCGGGATGTGGGGAGGACTCAGGCGCGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TCLLYPVETTCE*AGCGEDSGAAK Trigger: CTTGGCCGCGCCTGAGTCCTCCCCACATCCCGCCCACTCGCAAGTAGTTTCCACAGGGTACAGCAGACACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CAA 72 bp | CTCAGGGCGTTGGCCAGGCGGGAGAAGAGGGCCACCTaGAATTTTCTGAAGTCGTGGCCCATGAAGACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LRALARREKRAT*NFLKSWPMKTY Trigger: GTACGTCTTCATGGGCCACGACTTCAGAAAATTCAAGGTGGCCCTCTTCTCCCGCCTGGCCAACGCCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047936.13 |
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| CDS TCA 72 bp | GCCAAGCTGAAGTTGTTGAAGCAGGTTATCTTCCCATaGATGTTGGCGGTGTCCCGGAAGACAAGGGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: AKLKLLKQVIFP*MLAVSRKTRDG Trigger: CCCGTCCCTTGTCTTCCGGGACACCGCCAACATTCATGGGAAGATAACCTGCTTCAACAACTTCAGCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CAA 90 bp | ACAGCCAGGTTGACAAACCACACAGTGTTCACGGTCTTCTTCATCTaGAAGGTGGCGATGACAATCACCAGGCCGTTGCCTAGGAGACCG | + |
|
Preference number: 6 (lower is better) Translates to: TARLTNHTVFTVFFI*KVAMTITRPLPRRP Trigger: CGGTCTCCTAGGCAACGGCCTGGTGATTGTCATCGCCACCTTCAAGATGAAGAAGACCGTGAACACTGTGTGGTTTGTCAACCTGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
||
| CDS CAA 72 bp | AAGACGCTGGTGTACATGTTGTGGCTGAGCAAGAAGTaGCTGATCTTGCACATGGCCTTCCCGAACACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KTLVYMLWLSKK*LILHMAFPNTQ Trigger: CTGGGTGTTCGGGAAGGCCATGTGCAAGATCAGCAACTTCTTGCTCAGCCACAACATGTACACCAGCGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
||
| CDS CAA 72 bp | TTGACAAACCACACAGTGTTCACGGTCTTCTTCATCTaGAAGGTGGCGATGACAATCACCAGGCCGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LTNHTVFTVFFI*KVAMTITRPLP Trigger: AGGCAACGGCCTGGTGATTGTCATCGCCACCTTCAAGATGAAGAAGACCGTGAACACTGTGTGGTTTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CAA 72 bp | ATGATGGTGATAATGATCTTGAAGGGCTTCTTGTTCTaGGCCAGGCGGTTGCGCTGCAGCTTGAAGACGATG | + |
|
Preference number: 6 (lower is better) Translates to: MMVIMILKGFLF*ARRLRCSLKTM Trigger: CATCGTCTTCAAGCTGCAGCGCAACCGCCTGGCCAAGAACAAGAAGCCCTTCAAGATCATTATCACCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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| CDS CAA 90 bp | TGCATCGGCAAAAAGATGTTGAACAGGAAGTCGGCCACAGCCAGGTaGACAAACCACACAGTGTTCACGGTCTTCTTCATCTTGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CIGKKMLNRKSATAR*TNHTVFTVFFILKV Trigger: CACCTTCAAGATGAAGAAGACCGTGAACACTGTGTGGTTTGTCAACCTGGCTGTGGCCGACTTCCTGTTCAACATCTTTTTGCCGATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
||
| CDS CAA 72 bp | AAAAAGATGTTGAACAGGAAGTCGGCCACAGCCAGGTaGACAAACCACACAGTGTTCACGGTCTTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: KKMLNRKSATAR*TNHTVFTVFFI Trigger: GATGAAGAAGACCGTGAACACTGTGTGGTTTGTCAACCTGGCTGTGGCCGACTTCCTGTTCAACATCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047936.13 ENSMUST00000132065.8 |
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