Pregenerated sensors for CMAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030282Ensembl transcript IDs: ENSMUST00000032419.9, ENSMUST00000133248.8, ENSMUST00000144920.4, ENSMUST00000204147.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATGCATGTCTCTGCACCTTGTGTATACAGTGCCTCTGGAGGCCTaGAGAGGGCGCTGGATCCCCTGGGCTGGAGTTACAGCTGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: ACMSLHLVYTVPLEA*RGRWIPWAGVTAGC Trigger: ACAACCAGCTGTAACTCCAGCCCAGGGGATCCAGCGCCCTCTTCAGGCCTCCAGAGGCACTGTATACACAAGGTGCAGAGACATGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR TCA 90 bp | TCAACACTCGTCGTCGTGTGTGGGCACAGCGGCGAGGAGGCCAGGTaGGTGTCAGAGGTCTCTCAGTCGTTAGCTTGCTCATGTACTTGG | + |
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Preference number: 1 (lower is better) Translates to: STLVVVCGHSGEEAR*VSEVSQSLACSCTW Trigger: CCAAGTACATGAGCAAGCTAACGACTGAGAGACCTCTGACACTCACCTGGCCTCCTCGCCGCTGTGCCCACACACGACGACGAGTGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR GCA 90 bp | GCCACTAAACACAGATGCTGGCACAGTCCACTCGTGTGCATGGGCTaGTGGTGTGGGACAGGAGGTGGCTCCTTTTCTCTCTGTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: ATKHRCWHSPLVCMG*WCGTGGGSFSLCQW Trigger: CCACTGACAGAGAGAAAAGGAGCCACCTCCTGTCCCACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTGTTTAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CCA 90 bp | GGGACAGCTTGTGGGAGCTGCTTCTCTCCTCCTACCATGAGGCTTTaGAGCAAGTCCTGTGATCCACTGGGCCATCGTGCTGGCTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: GTACGSCFSPPTMRL*SKSCDPLGHRAGSS Trigger: TGAAGAGCCAGCACGATGGCCCAGTGGATCACAGGACTTGCTCCAAAGCCTCATGGTAGGAGGAGAGAAGCAGCTCCCACAAGCTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR GCA 90 bp | TCTGAACATGCCACTAAACACAGATGCTGGCACAGTCCACTCGTGTaGATGGGCTGCTGGTGTGGGACAGGAGGTGGCTCCTTTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: SEHATKHRCWHSPLV*MGCWCGTGGGSFSL Trigger: GAGAGAAAAGGAGCCACCTCCTGTCCCACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTGTTTAGTGGCATGTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CCA 90 bp | AACATGCCACTAAACACAGATGCTGGCACAGTCCACTCGTGTGCATaGGCTGCTGGTGTGGGACAGGAGGTGGCTCCTTTTCTCTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: NMPLNTDAGTVHSCA*AAGVGQEVAPFLSV Trigger: GACAGAGAGAAAAGGAGCCACCTCCTGTCCCACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTGTTTAGTGGCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CCA 90 bp | TCATGTACTTGGTGTGTGTGCACACGGAAGGCAGGGGACAGCTTGTaGGAGCTGCTTCTCTCCTCCTACCATGAGGCTTTGGAGCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: SCTWCVCTRKAGDSL*ELLLSSYHEALEQV Trigger: GACTTGCTCCAAAGCCTCATGGTAGGAGGAGAGAAGCAGCTCCCACAAGCTGTCCCCTGCCTTCCGTGTGCACACACACCAAGTACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR TCA 90 bp | ACCAGACATATCCTAGGGAGCAACCTCTGGTTACCAGATGGGAAGTaGCTGCCATTACACACCAGCCTTCTCCCGGGCCCAGACTGTACT | + |
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Preference number: 1 (lower is better) Translates to: TRHILGSNLWLPDGK*LPLHTSLLPGPDCT Trigger: AGTACAGTCTGGGCCCGGGAGAAGGCTGGTGTGTAATGGCAGTCACTTCCCATCTGGTAACCAGAGGTTGCTCCCTAGGATATGTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR GCA 90 bp | GCTAAGCACATCTCACACAGCTCTGAACATGCCACTAAACACAGATaGTGGCACAGTCCACTCGTGTGCATGGGCTGCTGGTGTGGGACA | + |
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Preference number: 1 (lower is better) Translates to: AKHISHSSEHATKHR*WHSPLVCMGCWCGT Trigger: TGTCCCACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTGTTTAGTGGCATGTTCAGAGCTGTGTGAGATGTGCTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CCA 90 bp | AAGCACATCTCACACAGCTCTGAACATGCCACTAAACACAGATGCTaGCACAGTCCACTCGTGTGCATGGGCTGCTGGTGTGGGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: KHISHSSEHATKHRC*HSPLVCMGCWCGTG Trigger: TCCTGTCCCACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTGTTTAGTGGCATGTTCAGAGCTGTGTGAGATGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR TCA 90 bp | TCTCCTTCCTCCACTCATCCACGGTGGCCAGCTTATCGGACACACTaGCTTCTGTTTTACAGTCCAGCTTTAGGGCAGAGAGCGTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SPSSTHPRWPAYRTH*LLFYSPALGQRASA Trigger: AGCAGACGCTCTCTGCCCTAAAGCTGGACTGTAAAACAGAAGTCAGTGTGTCCGATAAGCTGGCCACCGTGGATGAGTGGAGGAAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR GCA 90 bp | ACACTGACTTCTGTTTTACAGTCCAGCTTTAGGGCAGAGAGCGTCTaGTTGGAGCAGGCCCGTTCTGAGATGAGCCTCACCTCAATACCG | + |
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Preference number: 1 (lower is better) Translates to: TLTSVLQSSFRAESV*LEQARSEMSLTSIP Trigger: CGGTATTGAGGTGAGGCTCATCTCAGAACGGGCCTGCTCCAAGCAGACGCTCTCTGCCCTAAAGCTGGACTGTAAAACAGAAGTCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144920.4 ENSMUST00000204147.2 |
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| 3UTR GCA 90 bp | GAGGGCGCTGGATCCCCTGGGCTGGAGTTACAGCTGGTTGTAAACTaGTGTGTGTGCTGGAAATCAAACTTGTGTTCTCTGAGAATAGCA | + |
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Preference number: 1 (lower is better) Translates to: EGAGSPGLELQLVVN*CVCWKSNLCSLRIA Trigger: TGCTATTCTCAGAGAACACAAGTTTGATTTCCAGCACACACAGCAGTTTACAACCAGCTGTAACTCCAGCCCAGGGGATCCAGCGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR GCA 90 bp | TCTACAGGCTTGATGCTGATTCAGGCAACTAGTTCCACGTGTGCATaGAGCAGGGATCAGCTAAGCACATCTCACACAGCTCTGAACATG | + |
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Preference number: 1 (lower is better) Translates to: STGLMLIQATSSTCA*SRDQLSTSHTALNM Trigger: CATGTTCAGAGCTGTGTGAGATGTGCTTAGCTGATCCCTGCTGCATGCACACGTGGAACTAGTTGCCTGAATCAGCATCAAGCCTGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CCA 90 bp | GCACACAGTCATTCATATGGAAGCCTCTTTGAGCCTCATGGAAAATaGGTACAGCAGGAATCCTATGTATCACATGGGTGGTGCTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: AHSHSYGSLFEPHGK*VQQESYVSHGWCFL Trigger: TAGAAAGCACCACCCATGTGATACATAGGATTCCTGCTGTACCCATTTTCCATGAGGCTCAAAGAGGCTTCCATATGAATGACTGTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CCA 90 bp | AAGACAGAGTCATATCCTTCTTCTCGGATCATTTCTGCAACTTTCTaGAGGTCAGTGGGATGTAAACATGGAGATGTGGCTTGGATATTC | + |
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Preference number: 1 (lower is better) Translates to: KTESYPSSRIISATF*RSVGCKHGDVAWIF Trigger: GAATATCCAAGCCACATCTCCATGTTTACATCCCACTGACCTCCAGAAAGTTGCAGAAATGATCCGAGAAGAAGGATATGACTCTGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133248.8 ENSMUST00000144920.4 |
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| 3UTR TCA 90 bp | ACAATAAATAAAATCCCAGCATCATTAACACCACACACACTAGTTTaGCAGGGCACAATACAGAGTGGATTGTTTATGAGGTCGGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: TINKIPASLTPHTLV*QGTIQSGLFMRSEQ Trigger: TTGCTCCGACCTCATAAACAATCCACTCTGTATTGTGCCCTGTCAAACTAGTGTGTGTGGTGTTAATGATGCTGGGATTTTATTTATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| 3UTR CCA 90 bp | TTCTCTGAGAATAGCAGTGCTCTTAGTGAACCATTTTTACAGGCCTaGCATGTATTCTTATGTGCCTTTTTGAAACAGTGCTTGCATTCT | + |
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Preference number: 1 (lower is better) Translates to: FSENSSALSEPFLQA*HVFLCAFLKQCLHS Trigger: AGAATGCAAGCACTGTTTCAAAAAGGCACATAAGAATACATGCCAGGCCTGTAAAAATGGTTCACTAAGAGCACTGCTATTCTCAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR TCA 90 bp | CTGGCATGTATTCTTATGTGCCTTTTTGAAACAGTGCTTGCATTCTaGAGTAAACATTTAGGAAGTATTCTCTACTTCCTAATCTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: LACILMCLFETVLAF*SKHLGSILYFLISK Trigger: CTTGGAGATTAGGAAGTAGAGAATACTTCCTAAATGTTTACTTCAGAATGCAAGCACTGTTTCAAAAAGGCACATAAGAATACATGCCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CAA 90 bp | CGGCGAGGAGGCCAGGTGAGTGTCAGAGGTCTCTCAGTCGTTAGCTaGCTCATGTACTTGGTGTGTGTGCACACGGAAGGCAGGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: RRGGQVSVRGLSVVS*LMYLVCVHTEGRGQ Trigger: CTGTCCCCTGCCTTCCGTGTGCACACACACCAAGTACATGAGCAAGCTAACGACTGAGAGACCTCTGACACTCACCTGGCCTCCTCGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTCCCATGCTGGGCCTATGGGCACACAGCACCACGTCCAGCACAGTACTACAGAGAGCGTCTGCTTaGAGCAGGCCCGTTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: CLPMLGLWAHSTTSSTVLQRASA*SRPVLR Trigger: TCTCAGAACGGGCCTGCTCCAAGCAGACGCTCTCTG...TAGTACTGTGCTGGACGTGGTGCTGTGTGCCCATAGGCCCAGCATGGGAAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CAA 90 bp | TGCTCATGTACTTGGTGTGTGTGCACACGGAAGGCAGGGGACAGCTaGTGGGAGCTGCTTCTCTCCTCCTACCATGAGGCTTTGGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: CSCTWCVCTRKAGDS*WELLLSSYHEALEQ Trigger: TTGCTCCAAAGCCTCATGGTAGGAGGAGAGAAGCAGCTCCCACAAGCTGTCCCCTGCCTTCCGTGTGCACACACACCAAGTACATGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CAA 90 bp | AGACGTATGTGTCTGAATGGTTACCTGCATGCATGTCTCTGCACCTaGTGTATACAGTGCCTCTGGAGGCCTGAAGAGGGCGCTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: RRMCLNGYLHACLCT*CIQCLWRPEEGAGS Trigger: GGATCCAGCGCCCTCTTCAGGCCTCCAGAGGCACTGTATACACAAGGTGCAGAGACATGCATGCAGGTAACCATTCAGACACATACGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CAA 90 bp | AGTAAAAAGTGTTATGTGTCAGAGCCTGCTGGCCCTTTGCCTGGATaGTACAGCCTCTGTAGCAGCCCTAAGACATCGACTCCTGACACG | + |
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Preference number: 2 (lower is better) Translates to: SKKCYVSEPAGPLPG*YSLCSSPKTSTPDT Trigger: CGTGTCAGGAGTCGATGTCTTAGGGCTGCTACAGAGGCTGTACAATCCAGGCAAAGGGCCAGCAGGCTCTGACACATAACACTTTTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR TCA 90 bp | AGCACCACGTCCAGCACAGTACTAACACTGCTCAGGAATCTTCAAAGACGTATGTCACTCCATCGAAACTaGTGGCGCCTCACAACGGAG | + |
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Preference number: 2 (lower is better) Translates to: STTSSTVLTLLRNLQRRMSLHRN*WRLTTE Trigger: CTCCGTTGTGAGGCGCCATCAGTTTCGATGGAGTGA...CATACGTCTTTGAAGATTCCTGAGCAGTGTTAGTACTGTGCTGGACGTGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR GCA 90 bp | GGTACAGCAGGAATCCTATGTATCACATGGGTGGTGCTTTCTATAGCAAATGTGAGGGCAGAGAGCGTCTaGTTGGAGCAGGCCCGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GTAGILCITWVVLSIANVRAESV*LEQARS Trigger: AGAACGGGCCTGCTCCAAGCAGACGCTCTCTGCCCT...CACATTTGCTATAGAAAGCACCACCCATGTGATACATAGGATTCCTGCTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCATCCCAGTCTTGTCGACGAGGCCGTTTCGCTGGATTCAAGTTCAGAGGGTAAACATGGAGATGTaGCTTGGATATTCCCCACAA | + |
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Preference number: 2 (lower is better) Translates to: LSIPVLSTRPFRWIQVQRVNMEM*LGYSPQ Trigger: TTGTGGGGAATATCCAAGCCACATCTCCATGTTTAC...CCTCTGAACTTGAATCCAGCGAAACGGCCTCGTCGACAAGACTGGGATGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133248.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGCCTCCCAGTGCTTAGTGTCCACCCACAGAAATGTTCCCCTGTAACTCACAAATGTGGCCATTGGTaGGACATCCATCAATATTAC | + |
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Preference number: 2 (lower is better) Translates to: HCLPVLSVHPQKCSPVTHKCGHW*DIHQYY Trigger: GTAATATTGATGGATGTCTCACCAATGGCCACATTT...GTGAGTTACAGGGGAACATTTCTGTGGGTGGACACTAAGCACTGGGAGGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | CACTCCATCGAAACTGATGGCGCCTCACAACGGAGAAGACAGAGTCATATCCTTCTTTCTGGAGGTCAGTaGGATGTAAACATGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: HSIETDGASQRRRQSHILLSGGQ*DVNMEM Trigger: CATCTCCATGTTTACATCCCACTGACCTCCAGAAAG...AAGGATATGACTCTGTCTTCTCCGTTGTGAGGCGCCATCAGTTTCGATGGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133248.8 ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | AGCACCACGTCCAGCACAGTACTAACACTGCTCAGGAATCTTCAAAGACGTATGATGGATATCTGTGGGTaGGGTAGTGGTGGTAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: STTSSTVLTLLRNLQRRMMDICG*GSGGKH Trigger: ATGCTTACCACCACTACCCCACCCACAGATATCCAT...CATACGTCTTTGAAGATTCCTGAGCAGTGTTAGTACTGTGCTGGACGTGGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | GGTACAGCAGGAATCCTATGTATCACATGGGTGGTGCTTTCTATAGCAAATGTGGTGTGGGACAGGAGGTaGCTCCTTTTCTCTCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GTAGILCITWVVLSIANVVWDRR*LLFSLS Trigger: TGACAGAGAGAAAAGGAGCCACCTCCTGTCCCACAC...CACATTTGCTATAGAAAGCACCACCCATGTGATACATAGGATTCCTGCTGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR GCA 90 bp | TGTATCACATGGGTGGTGCTTTCTATAGCAAATGTGCTATTGGACTGTTCTCTAGTGGTGGTAAGCATGTaGCAGGGCTCTCATGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: CITWVVLSIANVLLDCSLVVVSM*QGSHVE Trigger: CTCCACATGAGAGCCCTGGCACATGCTTACCACCAC...TAGAGAACAGTCCAATAGCACATTTGCTATAGAAAGCACCACCCATGTGATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CAA 90 bp | TGTCTAAAGTTAAATTCTTCTTACAAGAGTTATCGAGATGCAAGCTaGAACCTACGATCCTCCTGCCTTCCCATGCTGGGCCTATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: CLKLNSSYKSYRDAS*NLRSSCLPMLGLWA Trigger: TGCCCATAGGCCCAGCATGGGAAGGCAGGAGGATCGTAGGTTCAAGCTTGCATCTCGATAACTCTTGTAAGAAGAATTTAACTTTAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR GCA 90 bp | CCCACAGAAATGTTCCCCTGTAACTCACGTACTGAACTGAATGGTTCCCATGGATTCTCGGATCATTTCTaGAACTTTCTGGAGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PTEMFPCNSRTELNGSHGFSDHF*NFLEVS Trigger: ACTGACCTCCAGAAAGTTGCAGAAATGATCCGAGAA...TCCATGGGAACCATTCAGTTCAGTACGTGAGTTACAGGGGAACATTTCTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | AATAGCCAAATCTCAGAACTCTTTGCTCTGCGATCGGCCAATCGATGTCCACGTGTAAACATGGAGATGTaGCTTGGATATTCCCCACAA | + |
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Preference number: 2 (lower is better) Translates to: NSQISELFALRSANRCPRVNMEM*LGYSPQ Trigger: TTGTGGGGAATATCCAAGCCACATCTCCATGTTTAC...ACGTGGACATCGATTGGCCGATCGCAGAGCAAAGAGTTCTGAGATTTGGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGAAATGTTCCCCTGTAACTCACGTACTGAACTGAATGGTTCCCATGGAAACTGCTGTGTGTGCTaGAAATCAAACTTGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PTEMFPCNSRTELNGSHGNCCVC*KSNLCS Trigger: AGAACACAAGTTTGATTTCCAGCACACACAGCAGTT...TCCATGGGAACCATTCAGTTCAGTACGTGAGTTACAGGGGAACATTTCTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CAA 90 bp | ATCCTATGTATCACATGGGTGGTGCTTTCTATAGCAAATGTGCTATaGGACTGTTCTCTATATTGGGCTCCAAAGTTATCCCAGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: ILCITWVVLSIANVL*DCSLYWAPKLSQHL Trigger: GAGGTGCTGGGATAACTTTGGAGCCCAATATAGAGAACAGTCCAATAGCACATTTGCTATAGAAAGCACCACCCATGTGATACATAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR CAA 90 bp | TCACTCTTTGATGATGAGCACACAGTCATTCATATGGAAGCCTCTTaGAGCCTCATGGAAAATGGGTACAGCAGGAATCCTATGTATCAC | + |
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Preference number: 2 (lower is better) Translates to: SLFDDEHTVIHMEAS*SLMENGYSRNPMYH Trigger: GTGATACATAGGATTCCTGCTGTACCCATTTTCCATGAGGCTCAAAGAGGCTTCCATATGAATGACTGTGTGCTCATCATCAAAGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | AGCATCATTAACACCACACACACTAGTTTGACAGGGCACAATACAGAGTGGATTACAATGCAAAATGGCTaGAAAAGGCTTCAATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SIINTTHTSLTGHNTEWITMQNG*KRLQSP Trigger: GGGAGATTGAAGCCTTTTCCAGCCATTTTGCATTGT...AATCCACTCTGTATTGTGCCCTGTCAAACTAGTGTGTGTGGTGTTAATGATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| 3UTR CAA 90 bp | GAGTTACAGCTGGTTGTAAACTGCTGTGTGTGCTGGAAATCAAACTaGTGTTCTCTGAGAATAGCAGTGCTCTTAGTGAACCATTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: ELQLVVNCCVCWKSN*CSLRIAVLLVNHFY Trigger: GTAAAAATGGTTCACTAAGAGCACTGCTATTCTCAGAGAACACAAGTTTGATTTCCAGCACACACAGCAGTTTACAACCAGCTGTAACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR-3UTR CCA 90 bp | AACACAGGGGTGTCTTACCAGACTCATTGCTTTACAATAAATAAAATCCCAGCAGGGCACAATACAGAGTaGATTGTTTATGAGGTCGGA | + |
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Preference number: 2 (lower is better) Translates to: NTGVSYQTHCFTINKIPAGHNTE*IVYEVG Trigger: TCCGACCTCATAAACAATCCACTCTGTATTGTGCCC...TGCTGGGATTTTATTTATTGTAAAGCAATGAGTCTGGTAAGACACCCCTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| 3UTR-3UTR TCA 90 bp | ATTACCTCGCATCAAGAGGAAAACAGACATGATTATGTCATGGGTTCAGGAACCTTACACTTCGGGACTTaGTCAAAACAATGCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: ITSHQEENRHDYVMGSGTLHFGT*SKQCKM Trigger: CATTTTGCATTGTTTTGATCAAGTCCCGAAGTGTAA...GGTTCCTGAACCCATGACATAATCATGTCTGTTTTCCTCTTGATGCGAGGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| 3UTR-3UTR TCA 90 bp | AACGGTAACTTTATTAACACAGGGGTGTCTTACCAGACTCATTGCTTTACAATATGGGTTCAGGAACCATaGTTGGAGAAAACTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: NGNFINTGVSYQTHCFTIWVQEP*LEKTQL Trigger: AAGCTGAGTTTTCTCCAATCATGGTTCCTGAACCCA...TATTGTAAAGCAATGAGTCTGGTAAGACACCCCTGTGTTAATAAAGTTACCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| 3UTR TCA 72 bp | GTCGTCGTGTGTGGGCACAGCGGCGAGGAGGCCAGGTaGGTGTCAGAGGTCTCTCAGTCGTTAGCTTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: VVVCGHSGEEAR*VSEVSQSLACS Trigger: TGAGCAAGCTAACGACTGAGAGACCTCTGACACTCACCTGGCCTCCTCGCCGCTGTGCCCACACACGACGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR GCA 72 bp | GCCACTAAACACAGATGCTGGCACAGTCCACTCGTGTaGATGGGCTGCTGGTGTGGGACAGGAGGTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: ATKHRCWHSPLV*MGCWCGTGGGS Trigger: GGAGCCACCTCCTGTCCCACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTGTTTAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR GCA 72 bp | CACAGATGCTGGCACAGTCCACTCGTGTGCATGGGCTaGTGGTGTGGGACAGGAGGTGGCTCCTTTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: HRCWHSPLVCMG*WCGTGGGSFSL Trigger: GAGAGAAAAGGAGCCACCTCCTGTCCCACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
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| 3UTR TCA 72 bp | TCTCTGCACCTTGTGTATACAGTGCCTCTGGAGGCCTaGAGAGGGCGCTGGATCCCCTGGGCTGGAGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: SLHLVYTVPLEA*RGRWIPWAGVT Trigger: TGTAACTCCAGCCCAGGGGATCCAGCGCCCTCTTCAGGCCTCCAGAGGCACTGTATACACAAGGTGCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR TCA 72 bp | GGACAGCTTGTGGGAGCTGCTTCTCTCCTCCTACCATaGGGCTTTGGAGCAAGTCCTGTGATCCACTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GQLVGAASLLLP*GFGASPVIHWA Trigger: GGCCCAGTGGATCACAGGACTTGCTCCAAAGCCTCATGGTAGGAGGAGAGAAGCAGCTCCCACAAGCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | TGGTGTGTGTGCACACGGAAGGCAGGGGACAGCTTGTaGGAGCTGCTTCTCTCCTCCTACCATGAGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WCVCTRKAGDSL*ELLLSSYHEAL Trigger: CAAAGCCTCATGGTAGGAGGAGAGAAGCAGCTCCCACAAGCTGTCCCCTGCCTTCCGTGTGCACACACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR TCA 72 bp | ATCCTAGGGAGCAACCTCTGGTTACCAGATGGGAAGTaGCTGCCATTACACACCAGCCTTCTCCCGGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILGSNLWLPDGK*LPLHTSLLPGP Trigger: TGGGCCCGGGAGAAGGCTGGTGTGTAATGGCAGTCACTTCCCATCTGGTAACCAGAGGTTGCTCCCTAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR TCA 72 bp | CTCTCCTCCTACCATGAGGCTTTGGAGCAAGTCCTGTaGTCCACTGGGCCATCGTGCTGGCTCTTCAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LSSYHEALEQVL*STGPSCWLFRL Trigger: CAGTCTGAAGAGCCAGCACGATGGCCCAGTGGATCACAGGACTTGCTCCAAAGCCTCATGGTAGGAGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | CTAAACACAGATGCTGGCACAGTCCACTCGTGTGCATaGGCTGCTGGTGTGGGACAGGAGGTGGCTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNTDAGTVHSCA*AAGVGQEVAPF Trigger: AAAAGGAGCCACCTCCTGTCCCACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTGTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | AACCTACGATCCTCCTGCCTTCCCATGCTGGGCCTATaGGCACACAGCACCACGTCCAGCACAGTACTAACA | + |
|
Preference number: 3 (lower is better) Translates to: NLRSSCLPMLGL*AHSTTSSTVLT Trigger: TGTTAGTACTGTGCTGGACGTGGTGCTGTGTGCCCATAGGCCCAGCATGGGAAGGCAGGAGGATCGTAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | AACATCACCAAGTATGTCAACACTCGTCGTCGTGTGTaGGCACAGCGGCGAGGAGGCCAGGTGAGTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NITKYVNTRRRV*AQRRGGQVSVR Trigger: TCTGACACTCACCTGGCCTCCTCGCCGCTGTGCCCACACACGACGACGAGTGTTGACATACTTGGTGATGTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | CTCTCCATCCCAGTCTTGTCGACGAGGCCGTTTCGCTaGATTCAAGTTCAGAGGCTCAGTCACTTCACGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSIPVLSTRPFR*IQVQRLSHFTN Trigger: GTTCGTGAAGTGACTGAGCCTCTGAACTTGAATCCAGCGAAACGGCCTCGTCGACAAGACTGGGATGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133248.8 |
||
| 3UTR CCA 72 bp | CTGCCTGCCACGGTAGACTTGGAACAGCTGTGTCAATaGATATCTGTGGGTGGGGTAGTGGTGGTAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LPATVDLEQLCQ*ISVGGVVVVSM Trigger: CATGCTTACCACCACTACCCCACCCACAGATATCCATTGACACAGCTGTTCCAAGTCTACCGTGGCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | TCACACAGCTCTGAACATGCCACTAAACACAGATGCTaGCACAGTCCACTCGTGTGCATGGGCTGCTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SHSSEHATKHRC*HSPLVCMGCWC Trigger: ACACCAGCAGCCCATGCACACGAGTGGACTGTGCCAGCATCTGTGTTTAGTGGCATGTTCAGAGCTGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | CAGACATATCCTAGGGAGCAACCTCTGGTTACCAGATaGGAAGTGACTGCCATTACACACCAGCCTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QTYPREQPLVTR*EVTAITHQPSP Trigger: GGGAGAAGGCTGGTGTGTAATGGCAGTCACTTCCCATCTGGTAACCAGAGGTTGCTCCCTAGGATATGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCAAAGGCCATTTCTCTCTTTTTACCAGACATATCCTAGGGAGCAACCTCGCAGAGAGCGTCTGCTaGGAGCAGGCCCGTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TFKGHFSLFTRHILGSNLAESVC*EQARSE Trigger: CTCAGAACGGGCCTGCTCCAAGCAGACGCTCTCTGC...GAGGTTGCTCCCTAGGATATGTCTGGTAAAAAGAGAGAAATGGCCTTTGAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR GCA 72 bp | GTAAAAAGTGTTATGTGTCAGAGCCTGCTGGCCCTTTaGCTGGATTGTACAGCCTCTGTAGCAGCCCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VKSVMCQSLLAL*LDCTASVAALR Trigger: TCTTAGGGCTGCTACAGAGGCTGTACAATCCAGGCAAAGGGCCAGCAGGCTCTGACACATAACACTTTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR GCA 72 bp | TTGATGCTGATTCAGGCAACTAGTTCCACGTGTGCATaGAGCAGGGATCAGCTAAGCACATCTCACACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LMLIQATSSTCA*SRDQLSTSHTA Trigger: AGCTGTGTGAGATGTGCTTAGCTGATCCCTGCTGCATGCACACGTGGAACTAGTTGCCTGAATCAGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR GCA 72 bp | GGATCCCCTGGGCTGGAGTTACAGCTGGTTGTAAACTaGTGTGTGTGCTGGAAATCAAACTTGTGTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSPGLELQLVVN*CVCWKSNLCSL Trigger: CAGAGAACACAAGTTTGATTTCCAGCACACACAGCAGTTTACAACCAGCTGTAACTCCAGCCCAGGGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR GCA 72 bp | TTCTGGATCCGACTACCAGTAGCACTGAGAAAACACTaGCTCCCAGTGCTTAGTGTCCACCCACAGAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: FWIRLPVALRKH*LPVLSVHPQKC Trigger: ACATTTCTGTGGGTGGACACTAAGCACTGGGAGGCAGTGTTTTCTCAGTGCTACTGGTAGTCGGATCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR GCA 72 bp | GGGCTGGAGTTACAGCTGGTTGTAAACTGCTGTGTGTaGTGGAAATCAAACTTGTGTTCTCTGAGAATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLELQLVVNCCV*WKSNLCSLRIA Trigger: TGCTATTCTCAGAGAACACAAGTTTGATTTCCAGCACACACAGCAGTTTACAACCAGCTGTAACTCCAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | ACCACACACACTAGTTTGACAGGGCACAATACAGAGTaGATTGTTTATGAGGTCGGAGCAAGACTAGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TTHTSLTGHNTE*IVYEVGARLGQ Trigger: TTGACCTAGTCTTGCTCCGACCTCATAAACAATCCACTCTGTATTGTGCCCTGTCAAACTAGTGTGTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| 3UTR CCA 72 bp | CATTCATATGGAAGCCTCTTTGAGCCTCATGGAAAATaGGTACAGCAGGAATCCTATGTATCACATGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HSYGSLFEPHGK*VQQESYVSHGW Trigger: CCACCCATGTGATACATAGGATTCCTGCTGTACCCATTTTCCATGAGGCTCAAAGAGGCTTCCATATGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR TCA 72 bp | ATGATGAGCACACAGTCATTCATATGGAAGCCTCTTTaGGCCTCATGGAAAATGGGTACAGCAGGAATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: MMSTQSFIWKPL*ASWKMGTAGIL Trigger: TAGGATTCCTGCTGTACCCATTTTCCATGAGGCTCAAAGAGGCTTCCATATGAATGACTGTGTGCTCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | CTGGAGTTACAGCTGGTTGTAAACTGCTGTGTGTGCTaGAAATCAAACTTGTGTTCTCTGAGAATAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LELQLVVNCCVC*KSNLCSLRIAV Trigger: CACTGCTATTCTCAGAGAACACAAGTTTGATTTCCAGCACACACAGCAGTTTACAACCAGCTGTAACTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | ACTGCTCAGGAATCTTCAAAGACGTATGTGTCTGAATaGTTACCTGCATGCATGTCTCTGCACCTTGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: TAQESSKTYVSE*LPACMSLHLVY Trigger: ATACACAAGGTGCAGAGACATGCATGCAGGTAACCATTCAGACACATACGTCTTTGAAGATTCCTGAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | TGGAAAATGGGTACAGCAGGAATCCTATGTATCACATaGGTGGTGCTTTCTATAGCAAATGTGCTATTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: WKMGTAGILCIT*VVLSIANVLLD Trigger: GTCCAATAGCACATTTGCTATAGAAAGCACCACCCATGTGATACATAGGATTCCTGCTGTACCCATTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR TCA 72 bp | GGCTCTCATGTGGAGGTTAGAGAGTTAGAGGTTAAATaGCTTTCAAAGGCCATTTCTCTCTTTTTACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GSHVEVRELEVK*LSKAISLFLPD Trigger: GTCTGGTAAAAAGAGAGAAATGGCCTTTGAAAGTCATTTAACCTCTAACTCTCTAACCTCCACATGAGAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CCA 72 bp | TCTATAGCAAATGTGCTATTGGACTGTTCTCTATATTaGGCTCCAAAGTTATCCCAGCACCTCAAGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: SIANVLLDCSLY*APKLSQHLKNT Trigger: TGTGTTCTTGAGGTGCTGGGATAACTTTGGAGCCCAATATAGAGAACAGTCCAATAGCACATTTGCTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR TCA 72 bp | CTTTTTGGTCTCCTGATACATAAATGTGGCCATTGGTaGGACATCCATCAATATTACAAACCAAAAGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LFGLLIHKCGHW*DIHQYYKPKAL Trigger: TAAAGCTTTTGGTTTGTAATATTGATGGATGTCTCACCAATGGCCACATTTATGTATCAGGAGACCAAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCCACGGTAGACTTGGAACAGCTGTGTCAATGGATATCTGTGGGTGGGGTAGTGGGATGCCTTTGCTaGCGCCGCGGGCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PATVDLEQLCQWISVGGVVGCLC*RRGPAP Trigger: TGGTGCTGGCCCGCGGCGGCAGCAAAGGCATCCCAC...TACCCCACCCACAGATATCCATTGACACAGCTGTTCCAAGTCTACCGTGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| CDS-3UTR GCA 90 bp | CACTCCATCGAAACTGATGGCGCCTCACAACGGAGAAGACAGAGTCATATCCTTGTGGGATGCCTTTGCTaGCGCCGCGGGCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HSIETDGASQRRRQSHILVGCLC*RRGPAP Trigger: TGGTGCTGGCCCGCGGCGGCAGCAAAGGCATCCCAC...AAGGATATGACTCTGTCTTCTCCGTTGTGAGGCGCCATCAGTTTCGATGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133248.8 ENSMUST00000144920.4 |
||
| CDS-3UTR TCA 90 bp | TCAGAACTCTTTGCTCTGCGATCGGCCAATCGATGTCCACGTCGATATCCACACCCCCCGCCAGGCGCTTaGTGTTCTTCAGTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SELFALRSANRCPRRYPHPPPGA*CSSVGC Trigger: GCATCCCACTGAAGAACATCAAGCGCCTGGCGGGGG...GTGTGGATATCGACGTGGACATCGATTGGCCGATCGCAGAGCAAAGAGTTCTGA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| CDS-3UTR TCA 90 bp | TCATATAACTCTCCATCCCAGTCTTGTCGACGAGGCCGTTTCGCTGGATTCAAGCCCCCGCCAGGCGCTTaGTGTTCTTCAGTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SYNSPSQSCRRGRFAGFKPPPGA*CSSVGC Trigger: GCATCCCACTGAAGAACATCAAGCGCCTGGCGGGGG...CTTGAATCCAGCGAAACGGCCTCGTCGACAAGACTGGGATGGAGAGTTATATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133248.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACGGATCAGACCACACACCTGCAGGACCCAGCCAATaGGCGGAACCCCCGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLSFENRELAHGSDHTPAGPSQ*AEPPPG Trigger: GCCTGGCGGGGGTTCCGCTCATTGGCTGGGTCCTGC...AGGTGTGTGGTCTGATCCGTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | AGCGTCTGCTTGGAGCAGGCCCGTTCTGAGATGAGCCTCACCTCAATACCGCTTCTTGATGTTCTTCAGTaGGATGCCTTTGCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVCLEQARSEMSLTSIPLLDVLQ*DAFAAA Trigger: GGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAG...AAGCGGTATTGAGGTGAGGCTCATCTCAGAACGGGCCTGCTCCAAGCAGACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGACTAGGTCAATCCCTCGGTAATTACCTCGCATCAAGAGGAAAACAGACACTGCAAACTCGCGGATaGCTCCCCGGCCACCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARLGQSLGNYLASRGKQTLQTRG*LPGHRC Trigger: GCAGCGGTGGCCGGGGAGCCATCCGCGAGTTTGCAG...TGTCTGTTTTCCTCTTGATGCGAGGTAATTACCGAGGGATTGACCTAGTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR TCA 90 bp | TTGGAGCAGGCCCGTTCTGAGATGAGCCTCACCTCAATACCGCTTTTCTTTAATCCCCCGCCAGGCGCTTaGTGTTCTTCAGTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LEQARSEMSLTSIPLFFNPPPGA*CSSVGC Trigger: GCATCCCACTGAAGAACATCAAGCGCCTGGCGGGGG...ATTAAAGAAAAGCGGTATTGAGGTGAGGCTCATCTCAGAACGGGCCTGCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGTCTTGTCGACGAGGCCGTTTCGCTGGATTCAAGTTCAGAGGCTCAGCTTGATGTTCTTCAGTaGGATGCCTTTGCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPSLVDEAVSLDSSSEAQLDVLQ*DAFAAA Trigger: GGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAG...CTGAGCCTCTGAACTTGAATCCAGCGAAACGGCCTCGTCGACAAGACTGGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133248.8 |
||
| 3UTR CAA 72 bp | CTAGCCGATTCTGACACACTGCCTGCCACGGTAGACTaGGAACAGCTGTGTCAATGGATATCTGTGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LADSDTLPATVD*EQLCQWISVGG Trigger: CCCACCCACAGATATCCATTGACACAGCTGTTCCAAGTCTACCGTGGCAGGCAGTGTGTCAGAATCGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CAA 72 bp | TGTTATGTGTCAGAGCCTGCTGGCCCTTTGCCTGGATaGTACAGCCTCTGTAGCAGCCCTAAGACATCGACT | + |
|
Preference number: 4 (lower is better) Translates to: CYVSEPAGPLPG*YSLCSSPKTST Trigger: AGTCGATGTCTTAGGGCTGCTACAGAGGCTGTACAATCCAGGCAAAGGGCCAGCAGGCTCTGACACATAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CAA 72 bp | TGTCTGAATGGTTACCTGCATGCATGTCTCTGCACCTaGTGTATACAGTGCCTCTGGAGGCCTGAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLNGYLHACLCT*CIQCLWRPEEG Trigger: GCCCTCTTCAGGCCTCCAGAGGCACTGTATACACAAGGTGCAGAGACATGCATGCAGGTAACCATTCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| CDS-3UTR TCA 90 bp | AGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACGGATCAGACCACACACCTCCCCCGCCAGGCGCTTaGTGTTCTTCAGTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLSFENRELAHGSDHTPPPPGA*CSSVGC Trigger: GCATCCCACTGAAGAACATCAAGCGCCTGGCGGGGG...AGGTGTGTGGTCTGATCCGTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR GCA 90 bp | AACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACGGATCAGTGGGATGCCTTTGCTaGCGCCGCGGGCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NHDWRKLSFENRELAHGSVGCLC*RRGPAP Trigger: TGGTGCTGGCCCGCGGCGGCAGCAAAGGCATCCCAC...TGATCCGTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR GCA 90 bp | AGCATCATTAACACCACACACACTAGTTTGACAGGGCACAATACAGAGTGGATTTCAGTGGGATGCCTTTaGTGCCGCCGCGGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIINTTHTSLTGHNTEWISVGCL*CRRGPA Trigger: TGCTGGCCCGCGGCGGCAGCAAAGGCATCCCACTGA...AATCCACTCTGTATTGTGCCCTGTCAAACTAGTGTGTGTGGTGTTAATGATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR GCA 90 bp | AGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACGGAAGGGCAGAGAGCGTCTaGTTGGAGCAGGCCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNHDWRKLSFENRELAHGRAESV*LEQARS Trigger: AGAACGGGCCTGCTCCAAGCAGACGCTCTCTGCCCT...TCCGTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR GCA 90 bp | ACATCCATCAATATTACAAACCAAAAGCTTTATCTCCTTCAGCTTCTCTTTTCCGTGGGATGCCTTTGCTaGCGCCGCGGGCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TSINITNQKLYLLQLLFSVGCLC*RRGPAP Trigger: TGGTGCTGGCCCGCGGCGGCAGCAAAGGCATCCCAC...GGAAAAGAGAAGCTGAAGGAGATAAAGCTTTTGGTTTGTAATATTGATGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCAACTTTCTGGAGGTCAGTGGGATGTAAACATGGAGATGTGGCTTGGACTTGATGTTCTTCAGTaGGATGCCTTTGCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLQLSGGQWDVNMEMWLGLDVLQ*DAFAAA Trigger: GGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAG...TCCAAGCCACATCTCCATGTTTACATCCCACTGACCTCCAGAAAGTTGCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133248.8 ENSMUST00000144920.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGACTAGGTCAATCCCTCGGTAATTACCTCGCATCAAGAGGAAAACAGACAACGAGGCCGTTTCGCTaGATTCAAGTTCAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARLGQSLGNYLASRGKQTTRPFR*IQVQRL Trigger: GAGCCTCTGAACTTGAATCCAGCGAAACGGCCTCGT...TGTCTGTTTTCCTCTTGATGCGAGGTAATTACCGAGGGATTGACCTAGTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | GAGGAAAACAGACATGATTATGTCATGGGTTCAGGAACCATGATTGGAGAAAACCAGAGAGCGTCTGCTTaGAGCAGGCCCGTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EENRHDYVMGSGTMIGENQRASA*SRPVLR Trigger: TCTCAGAACGGGCCTGCTCCAAGCAGACGCTCTCTG...GTTTTCTCCAATCATGGTTCCTGAACCCATGACATAATCATGTCTGTTTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR TCA 90 bp | AACACAGGGGTGTCTTACCAGACTCATTGCTTTACAATAAATAAAATCCCAGCATCACTCCATCGAAACTaGTGGCGCCTCACAACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGVSYQTHCFTINKIPASLHRN*WRLTTE Trigger: CTCCGTTGTGAGGCGCCATCAGTTTCGATGGAGTGA...TGCTGGGATTTTATTTATTGTAAAGCAATGAGTCTGGTAAGACACCCCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGACTAGGTCAATCCCTCGGTAATTACCTCGCATCAAGAGGAAAACAGACAGCTTATCGGACACACTaGCTTCTGTTTTACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARLGQSLGNYLASRGKQTAYRTH*LLFYSP Trigger: TGGACTGTAAAACAGAAGTCAGTGTGTCCGATAAGC...TGTCTGTTTTCCTCTTGATGCGAGGTAATTACCGAGGGATTGACCTAGTCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR TCA 90 bp | AGCATCATTAACACCACACACACTAGTTTGACAGGGCACAATACAGAGTGGATTTCAGGCCCACTCTCTTaGGGCATTCTTCATCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SIINTTHTSLTGHNTEWISGPLS*GILHQT Trigger: TGTCTGATGAAGAATGCCTCAAGAGAGTGGGCCTGA...AATCCACTCTGTATTGTGCCCTGTCAAACTAGTGTGTGTGGTGTTAATGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACCTTGATGTTCTTCAGTaGGATGCCTTTGCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRNHDWRKLSFENRELAHLDVLQ*DAFAAA Trigger: GGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAG...GTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | AATGTGGCCATTGGTGAGACATCCATCAATATTACAAACCAAAAGCTTTATCTCCATTTTCCCACCCTCTaGAAGACCCCCGCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVAIGETSINITNQKLYLHFPTL*KTPASR Trigger: CCTGGATGCGGGGGTCTTCCAGAGGGTGGGAAAATG...GAGATAAAGCTTTTGGTTTGTAATATTGATGGATGTCTCACCAATGGCCACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204147.2 |
||
| 3UTR CAA 72 bp | GATGATGAGCACACAGTCATTCATATGGAAGCCTCTTaGAGCCTCATGGAAAATGGGTACAGCAGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: DDEHTVIHMEAS*SLMENGYSRNP Trigger: AGGATTCCTGCTGTACCCATTTTCCATGAGGCTCAAAGAGGCTTCCATATGAATGACTGTGTGCTCATCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CAA 72 bp | TTAAATTCTTCTTACAAGAGTTATCGAGATGCAAGCTaGAACCTACGATCCTCCTGCCTTCCCATGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNSSYKSYRDAS*NLRSSCLPMLG Trigger: GCCCAGCATGGGAAGGCAGGAGGATCGTAGGTTCAAGCTTGCATCTCGATAACTCTTGTAAGAAGAATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACTCTTCGATGGACCTGTaGACCAAACTGTTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FRNHDWRKLSFENRELAHSSMDL*TKLFGH Trigger: GTGGCCAAACAGTTTGGTGCACAGGTCCATCGAAGA...GTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGACTAGGTCAATCCCTCGGTAATTACCTCGCATCAAGAGGAAAACAGACATTCTCGGATCATTTCTaGAACTTTCTGGAGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARLGQSLGNYLASRGKQTFSDHF*NFLEVS Trigger: ACTGACCTCCAGAAAGTTGCAGAAATGATCCGAGAA...TGTCTGTTTTCCTCTTGATGCGAGGTAATTACCGAGGGATTGACCTAGTCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | ATTACCTCGCATCAAGAGGAAAACAGACATGATTATGTCATGGGTTCAGGAACCTCAGAACTTCTTCGATaGACCTGTGCACCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITSHQEENRHDYVMGSGTSELLR*TCAPNC Trigger: ACAGTTTGGTGCACAGGTCCATCGAAGAAGTTCTGA...GGTTCCTGAACCCATGACATAATCATGTCTGTTTTCCTCTTGATGCGAGGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | AGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACGGACATGGAGATGTGGCTTaGATATTCCCCACAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNHDWRKLSFENRELAHGHGDVA*IFPTMS Trigger: TGACATTGTGGGGAATATCCAAGCCACATCTCCATG...TCCGTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACATCAGTAGGAAAATGTaGTCTGCAAACTCGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FRNHDWRKLSFENRELAHISRKM*SANSRM Trigger: CATCCGCGAGTTTGCAGAGCACATTTTCCTACTGAT...GTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGACTAGGTCAATCCCTCGGTAATTACCTCGCATCAAGAGGAAAACAGACATTCTCAATTTCATCATaGTCTGTTGAAACCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ARLGQSLGNYLASRGKQTFSISS*SVETHT Trigger: TGTGTGGGTTTCAACAGACCATGATGAAATTGAGAA...TGTCTGTTTTCCTCTTGATGCGAGGTAATTACCGAGGGATTGACCTAGTCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACCTTTCTGGAGGTCAGTaGGATGTAAACATGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: FRNHDWRKLSFENRELAHLSGGQ*DVNMEM Trigger: CATCTCCATGTTTACATCCCACTGACCTCCAGAAAG...GTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| 3UTR CAA 72 bp | TTCTATAGCAAATGTGCTATTGGACTGTTCTCTATATaGGGCTCCAAAGTTATCCCAGCACCTCAAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: FYSKCAIGLFSI*GSKVIPAPQEH Trigger: GTGTTCTTGAGGTGCTGGGATAACTTTGGAGCCCAATATAGAGAACAGTCCAATAGCACATTTGCTATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CAA 72 bp | ATCACATGGGTGGTGCTTTCTATAGCAAATGTGCTATaGGACTGTTCTCTATATTGGGCTCCAAAGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: ITWVVLSIANVL*DCSLYWAPKLS Trigger: GGATAACTTTGGAGCCCAATATAGAGAACAGTCCAATAGCACATTTGCTATAGAAAGCACCACCCATGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| 3UTR CAA 72 bp | CATTTAGGAAGTATTCTCTACTTCCTAATCTCCAAGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLGSILYFLISK*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACAACTTGGAGATTAGGAAGTAGAGAATACTTCCTAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| CDS-3UTR TCA 90 bp | AACACAGGGGTGTCTTACCAGACTCATTGCTTTACAATAAATAAAATCCCAGCATTCATCATGGTCTGTTaGAACCCACACACTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTGVSYQTHCFTINKIPAFIMVC*NPHTLE Trigger: TTCCAGAGTGTGTGGGTTTCAACAGACCATGATGAA...TGCTGGGATTTTATTTATTGTAAAGCAATGAGTCTGGTAAGACACCCCTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CCA 90 bp | GAGGAAAACAGACATGATTATGTCATGGGTTCAGGAACCATGATTGGAGAAAACGTAAACATGGAGATGTaGCTTGGATATTCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: EENRHDYVMGSGTMIGENVNMEM*LGYSPQ Trigger: TTGTGGGGAATATCCAAGCCACATCTCCATGTTTAC...GTTTTCTCCAATCATGGTTCCTGAACCCATGACATAATCATGTCTGTTTTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACAAATGTGGCCATTGGTaGGACATCCATCAATATTAC | + |
|
Preference number: 4 (lower is better) Translates to: FRNHDWRKLSFENRELAHKCGHW*DIHQYY Trigger: GTAATATTGATGGATGTCTCACCAATGGCCACATTT...GTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| 3UTR CAA 72 bp | TCTGTTTTTCTCTCTAATGTTAGTACAGTTCACTCTTaGATGATGAGCACACAGTCATTCATATGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVFLSNVSTVHS*MMSTQSFIWKP Trigger: AGGCTTCCATATGAATGACTGTGTGCTCATCATCAAAGAGTGAACTGTACTAACATTAGAGAGAAAAACAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144920.4 |
||
| CDS CCA 90 bp | CCAGCCAATGAGCGGAACCCCCGCCAGGCGCTTGATGTTCTTCAGTaGGATGCCTTTGCTGCCGCCGCGGGCCAGCACCAGCGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PANERNPRQALDVLQ*DAFAAAAGQHQRCQ Trigger: CTGGCAGCGCTGGTGCTGGCCCGCGGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAGCGCCTGGCGGGGGTTCCGCTCATTGGCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032419.9 ENSMUST00000133248.8 ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS TCA 90 bp | CCCCGGAGCAGGCGTCGGCAGGAACAGCGCTCAGGCCCACTCTCTTaGGGCATTCTTCATCAGACACTTCATTGCCGAGATAGGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PRSRRRQEQRSGPLS*GILHQTLHCRDRPL Trigger: AAGTGGCCTATCTCGGCAATGAAGTGTCTGATGAAGAATGCCTCAAGAGAGTGGGCCTGAGCGCTGTTCCTGCCGACGCCTGCTCCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGAGCGTCTGCTTGGAGCAGGCCCGTTCTGAGATGAGCCTCACCTCAATAACCCCCGCCAGGCGCTaGATGTTCTTCAGTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AESVCLEQARSEMSLTSITPARR*MFFSGM Trigger: CATCCCACTGAAGAACATCAAGCGCCTGGCGGGGGT...TATTGAGGTGAGGCTCATCTCAGAACGGGCCTGCTCCAAGCAGACGCTCTCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS GCA 90 bp | GTCCACGTCGATATCCACACTGTGCTCAGCTCGCATTTCATAATATaGCATTTTCCCACCCTCTGGAAGACCCCCGCATCCAGGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VHVDIHTVLSSHFII*HFPTLWKTPASRAA Trigger: CGCCGCCCTGGATGCGGGGGTCTTCCAGAGGGTGGGAAAATGGCATATTATGAAATGCGAGCTGAGCACAGTGTGGATATCGACGTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204147.2 |
||
| CDS TCA 90 bp | TGCACCAAACTGTTTGGCCACATTCTCAATTTCATCATGGTCTGTTaGAACCCACACACTCTGGAAGACCCCCGCATCCAGGGCGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CTKLFGHILNFIMVC*NPHTLEDPRIQGGA Trigger: CGCGCCGCCCTGGATGCGGGGGTCTTCCAGAGTGTGTGGGTTTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGACTAGGTCAATCCCTCGGTAATTACCTCGCATCAAGAGGAAAACAGACACTCTCCATCCCAGTCTaGTCGACGAGGCCGTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ARLGQSLGNYLASRGKQTLSIPV*STRPFR Trigger: GCGAAACGGCCTCGTCGACAAGACTGGGATGGAGAG...TGTCTGTTTTCCTCTTGATGCGAGGTAATTACCGAGGGATTGACCTAGTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS CCA 90 bp | TGGACCTGTGCACCAAACTGTTTGGCCACATTCTCAATTTCATCATaGTCTGTTGAAACCCACACACTCTGGAAGACCCCCGCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WTCAPNCLATFSISS*SVETHTLWKTPASR Trigger: CCTGGATGCGGGGGTCTTCCAGAGTGTGTGGGTTTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCACAGGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCTCAGCTCGCATTTCATAATATGCCATTTTCCCACCCTGTAAGTAACCCAACCCCCGCCAGGCGCTaGATGTTCTTCAGTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CAQLAFHNMPFSHPVSNPTPARR*MFFSGM Trigger: CATCCCACTGAAGAACATCAAGCGCCTGGCGGGGGT...TGGGTTACTTACAGGGTGGGAAAATGGCATATTATGAAATGCGAGCTGAGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133248.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAAACAGACATGATTATGTCATGGGTTCAGGAACCATGATTGGAGAAAACGCAGAGAGCGTCTGCTaGGAGCAGGCCCGTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EENRHDYVMGSGTMIGENAESVC*EQARSE Trigger: CTCAGAACGGGCCTGCTCCAAGCAGACGCTCTCTGC...GTTTTCTCCAATCATGGTTCCTGAACCCATGACATAATCATGTCTGTTTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS-3UTR CAA 90 bp | ATGAGCCTCACCTCAATACCGCTTTTCTTTAATAAACTTATGCCAATAGCGTCTACCCCCGCCAGGCGCTaGATGTTCTTCAGTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MSLTSIPLFFNKLMPIASTPARR*MFFSGM Trigger: CATCCCACTGAAGAACATCAAGCGCCTGGCGGGGGT...AGACGCTATTGGCATAAGTTTATTAAAGAAAAGCGGTATTGAGGTGAGGCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS-3UTR CAA 90 bp | AACGGTAACTTTATTAACACAGGGGTGTCTTACCAGACTCATTGCTTTACAATAACCCCCGCCAGGCGCTaGATGTTCTTCAGTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NGNFINTGVSYQTHCFTITPARR*MFFSGM Trigger: CATCCCACTGAAGAACATCAAGCGCCTGGCGGGGGT...TATTGTAAAGCAATGAGTCTGGTAAGACACCCCTGTGTTAATAAAGTTACCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS GCA 90 bp | GGTAGAGCTGTCTTTGGACGTTTCAGAACTTCTTCGATGGACCTGTaGACCAAACTGTTTGGCCACATTCTCAATTTCATCATGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRAVFGRFRTSSMDL*TKLFGHILNFIMVC Trigger: ACAGACCATGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCACAGGTCCATCGAAGAAGTTCTGAAACGTCCAAAGACAGCTCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS CCA 90 bp | TCTAGTGAGGTAGAGCTGTCTTTGGACGTTTCAGAACTTCTTCGATaGACCTGTGCACCAAACTGTTTGGCCACATTCTCAATTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSEVELSLDVSELLR*TCAPNCLATFSISS Trigger: TGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCACAGGTCCATCGAAGAAGTTCTGAAACGTCCAAAGACAGCTCTACCTCACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS CCA 90 bp | CATATCCTTCTTCTCGGATCATTTCTGCAACTTTCTGGAGGTCAGTaGGATGTAAACATGGAGATGTGGCTTGGATATTCCCCACAATGT | + |
|
Preference number: 5 (lower is better) Translates to: HILLLGSFLQLSGGQ*DVNMEMWLGYSPQC Trigger: ACATTGTGGGGAATATCCAAGCCACATCTCCATGTTTACATCCCACTGACCTCCAGAAAGTTGCAGAAATGATCCGAGAAGAAGGATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS CCA 90 bp | TTTCTGCAACTTTCTGGAGGTCAGTGGGATGTAAACATGGAGATGTaGCTTGGATATTCCCCACAATGTCAACCTCATTGTGATAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLQLSGGQWDVNMEM*LGYSPQCQPHCDNS Trigger: TGAATTATCACAATGAGGTTGACATTGTGGGGAATATCCAAGCCACATCTCCATGTTTACATCCCACTGACCTCCAGAAAGTTGCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CAA 90 bp | AGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACGGATGTGCACCAAACTGTTaGGCCACATTCTCAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RNHDWRKLSFENRELAHGCAPNC*ATFSIS Trigger: TGAAATTGAGAATGTGGCCAAACAGTTTGGTGCACA...TCCGTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGGAACCATGATTGGAGAAAACTCAGCTTTGAGAATAGAGAACTAGCTCACGAGGTAGAGCTGTCTTaGGACGTTTCAGAACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FRNHDWRKLSFENRELAHEVELS*DVSELL Trigger: AAGAAGTTCTGAAACGTCCAAAGACAGCTCTACCTC...GTGAGCTAGTTCTCTATTCTCAAAGCTGAGTTTTCTCCAATCATGGTTCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CAA 90 bp | AACGGTAACTTTATTAACACAGGGGTGTCTTACCAGACTCATTGCTTTACAATAACATGGAGATGTGGCTaGGATATTCCCCACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: NGNFINTGVSYQTHCFTITWRCG*DIPHNV Trigger: GACATTGTGGGGAATATCCAAGCCACATCTCCATGT...TATTGTAAAGCAATGAGTCTGGTAAGACACCCCTGTGTTAATAAAGTTACCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS-3UTR CAA 90 bp | AACGGTAACTTTATTAACACAGGGGTGTCTTACCAGACTCATTGCTTTACAATATTTCATCATGGTCTGTaGAAACCCACACACTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NGNFINTGVSYQTHCFTIFHHGL*KPTHSG Trigger: TCCAGAGTGTGTGGGTTTCAACAGACCATGATGAAA...TATTGTAAAGCAATGAGTCTGGTAAGACACCCCTGTGTTAATAAAGTTACCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS CAA 90 bp | AGCGGAACCCCCGCCAGGCGCTTGATGTTCTTCAGTGGGATGCCTTaGCTGCCGCCGCGGGCCAGCACCAGCGCTGCCAGGTGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGTPARRLMFFSGMP*LPPRASTSAARCGG Trigger: GCCGCCGCACCTGGCAGCGCTGGTGCTGGCCCGCGGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAGCGCCTGGCGGGGGTTCCGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032419.9 ENSMUST00000133248.8 ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS CAA 90 bp | GCGGCGCGCAGGACCCAGCCAATGAGCGGAACCCCCGCCAGGCGCTaGATGTTCTTCAGTGGGATGCCTTTGCTGCCGCCGCGGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AARRTQPMSGTPARR*MFFSGMPLLPPRAS Trigger: GCTGGCCCGCGGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAGCGCCTGGCGGGGGTTCCGCTCATTGGCTGGGTCCTGCGCGCCGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032419.9 ENSMUST00000133248.8 ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS CAA 72 bp | CCCGCCAGGCGCTTGATGTTCTTCAGTGGGATGCCTTaGCTGCCGCCGCGGGCCAGCACCAGCGCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PARRLMFFSGMP*LPPRASTSAAR Trigger: CCTGGCAGCGCTGGTGCTGGCCCGCGGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAGCGCCTGGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032419.9 ENSMUST00000133248.8 ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS CCA 72 bp | GAGCGGAACCCCCGCCAGGCGCTTGATGTTCTTCAGTaGGATGCCTTTGCTGCCGCCGCGGGCCAGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ERNPRQALDVLQ*DAFAAAAGQHQ Trigger: CTGGTGCTGGCCCGCGGCGGCAGCAAAGGCATCCCACTGAAGAACATCAAGCGCCTGGCGGGGGTTCCGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032419.9 ENSMUST00000133248.8 ENSMUST00000144920.4 ENSMUST00000204147.2 |
||
| CDS GCA 72 bp | GCTCTGCAAACTCGCGGATGGCTCCCCGGCCACCGCTaGATTTGCAGATGTACCCCACAGCCTTCTGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALQTRGWLPGHR*ICRCTPQPSGP Trigger: GGGCCCAGAAGGCTGTGGGGTACATCTGCAAATGCAGCGGTGGCCGGGGAGCCATCCGCGAGTTTGCAGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS CCA 72 bp | AGCTCGCATTTCATAATATGCCATTTTCCCACCCTCTaGAAGACCCCCGCATCCAGGGCGGCGCGCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SSHFIICHFPTL*KTPASRAARRT Trigger: GGTCCTGCGCGCCGCCCTGGATGCGGGGGTCTTCCAGAGGGTGGGAAAATGGCATATTATGAAATGCGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204147.2 |
||
| CDS CAA 72 bp | CAGGCGTCGGCAGGAACAGCGCTCAGGCCCACTCTCTaGAGGCATTCTTCATCAGACACTTCATTGCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QASAGTALRPTL*RHSSSDTSLPR Trigger: TCTCGGCAATGAAGTGTCTGATGAAGAATGCCTCAAGAGAGTGGGCCTGAGCGCTGTTCCTGCCGACGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS TCA 72 bp | AGGCGTCGGCAGGAACAGCGCTCAGGCCCACTCTCTTaGGGCATTCTTCATCAGACACTTCATTGCCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RRRQEQRSGPLS*GILHQTLHCRD Trigger: ATCTCGGCAATGAAGTGTCTGATGAAGAATGCCTCAAGAGAGTGGGCCTGAGCGCTGTTCCTGCCGACGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
||
| CDS CCA 72 bp | CTATCAGTAGGAAAATGTGCTCTGCAAACTCGCGGATaGCTCCCCGGCCACCGCTGCATTTGCAGATGTACC | + |
|
Preference number: 6 (lower is better) Translates to: LSVGKCALQTRG*LPGHRCICRCT Trigger: GGTACATCTGCAAATGCAGCGGTGGCCGGGGAGCCATCCGCGAGTTTGCAGAGCACATTTTCCTACTGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CAA 90 bp | GTGCACCAAACTGTTTGGCCACATTCTCAATTTCATCATGGTCTGTaGAAACCCACACACTCTGGAAGACCCCCGCATCCAGGGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: VHQTVWPHSQFHHGL*KPTHSGRPPHPGRR Trigger: GCGCCGCCCTGGATGCGGGGGTCTTCCAGAGTGTGTGGGTTTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS TCA 72 bp | CTGTTTGGCCACATTCTCAATTTCATCATGGTCTGTTaGAACCCACACACTCTGGAAGACCCCCGCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: LFGHILNFIMVC*NPHTLEDPRIQ Trigger: CTGGATGCGGGGGTCTTCCAGAGTGTGTGGGTTTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CCA 72 bp | GCACCAAACTGTTTGGCCACATTCTCAATTTCATCATaGTCTGTTGAAACCCACACACTCTGGAAGACCCCC | + |
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Preference number: 6 (lower is better) Translates to: APNCLATFSISS*SVETHTLWKTP Trigger: GGGGGTCTTCCAGAGTGTGTGGGTTTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CAA 72 bp | ACTGTTTGGCCACATTCTCAATTTCATCATGGTCTGTaGAAACCCACACACTCTGGAAGACCCCCGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: TVWPHSQFHHGL*KPTHSGRPPHP Trigger: TGGATGCGGGGGTCTTCCAGAGTGTGTGGGTTTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CCA 72 bp | GTAGAGCTGTCTTTGGACGTTTCAGAACTTCTTCGATaGACCTGTGCACCAAACTGTTTGGCCACATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VELSLDVSELLR*TCAPNCLATFS Trigger: TGAGAATGTGGCCAAACAGTTTGGTGCACAGGTCCATCGAAGAAGTTCTGAAACGTCCAAAGACAGCTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CCA 72 bp | CTTTCTGGAGGTCAGTGGGATGTAAACATGGAGATGTaGCTTGGATATTCCCCACAATGTCAACCTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: LSGGQWDVNMEM*LGYSPQCQPHC Trigger: ACAATGAGGTTGACATTGTGGGGAATATCCAAGCCACATCTCCATGTTTACATCCCACTGACCTCCAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CAA 72 bp | AATTCTACAATGGCGTCTAGTGAGGTAGAGCTGTCTTaGGACGTTTCAGAACTTCTTCGATGGACCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: NSTMASSEVELS*DVSELLRWTCA Trigger: TGCACAGGTCCATCGAAGAAGTTCTGAAACGTCCAAAGACAGCTCTACCTCACTAGACGCCATTGTAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CAA 90 bp | TTGGACGTTTCAGAACTTCTTCGATGGACCTGTGCACCAAACTGTTaGGCCACATTCTCAATTTCATCATGGTCTGTTGAAACCCACACA | + |
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Preference number: 6 (lower is better) Translates to: LDVSELLRWTCAPNC*ATFSISSWSVETHT Trigger: TGTGTGGGTTTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCACAGGTCCATCGAAGAAGTTCTGAAACGTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS GCA 72 bp | GTCTTTGGACGTTTCAGAACTTCTTCGATGGACCTGTaGACCAAACTGTTTGGCCACATTCTCAATTTCATC | + |
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Preference number: 6 (lower is better) Translates to: VFGRFRTSSMDL*TKLFGHILNFI Trigger: GATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCACAGGTCCATCGAAGAAGTTCTGAAACGTCCAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CCA 72 bp | CAGAACTTCTTCGATGGACCTGTGCACCAAACTGTTTaGCCACATTCTCAATTTCATCATGGTCTGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: QNFFDGPVHQTV*PHSQFHHGLLK Trigger: TTTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCACAGGTCCATCGAAGAAGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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| CDS CAA 72 bp | TCAGAACTTCTTCGATGGACCTGTGCACCAAACTGTTaGGCCACATTCTCAATTTCATCATGGTCTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SELLRWTCAPNC*ATFSISSWSVE Trigger: TTCAACAGACCATGATGAAATTGAGAATGTGGCCAAACAGTTTGGTGCACAGGTCCATCGAAGAAGTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032419.9 |
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