Pregenerated sensors for CLYBL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025545Ensembl transcript IDs: ENSMUST00000026625.7
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCATCCATTCAGCCCGCCTaGGGAGGGCTTCATTTAACA | + |
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Preference number: 2 (lower is better) Translates to: SSMLASCPGYCGLSLRSPSIQPA*GGLHLT Trigger: TGTTAAATGAAGCCCTCCTCAGGCGGGCTGAATGGA...TGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CCA 90 bp | GAGGTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTGGGATGCCTTCAGCCTaGGCAGCGCCGCCGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EVLIQHASKLPWVLRFVFGMPSA*AAPPLH Trigger: GTGGAGCGGCGGCGCTGCCCAGGCTGAAGGCATCCC...AAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR TCA 90 bp | GAGGTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTTCACCTGTTTACCAGTaGAGCCCATGGCGGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: EVLIQHASKLPWVLRFVFSPVYQ*SPWRLL Trigger: AAGCAGCCGCCATGGGCTTCACTGGTAAACAGGTGA...AAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR GCA 90 bp | GAGGTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTGCTCCCTTTCCCAGCTaGTGGTGTTCTTTGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: EVLIQHASKLPWVLRFVFAPFPS*WCSLKA Trigger: TGCCTTCAAAGAACACCAGCAGCTGGGAAAGGGAGC...AAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CCA 90 bp | GAGGTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTCCCTTTCCCAGCTGCTaGTGTTCTTTGAAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EVLIQHASKLPWVLRFVFPFPSC*CSLKAA Trigger: TGCTGCCTTCAAAGAACACCAGCAGCTGGGAAAGGG...AAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| 3UTR CAA 72 bp | TCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTaGTCTTTAAGAAGCCCACAGTATCCATTCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SSMLASCPGYCG*SLRSPQYPFSP Trigger: CGGGCTGAATGGATACTGTGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR TCA 90 bp | CTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCAAAGGCTTTTGCCGTaGCAACAACCTTCTGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LIQHASKLPWVLRFVFKKQRLLP*QQPSAG Trigger: CCCGGCAGAAGGTTGTTGTCACGGCAAAAGCCTTTG...CTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR TCA 90 bp | GAGGTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTGCTGCTGGTGTTCTTTaGAGGCAGCAATCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: EVLIQHASKLPWVLRFVFAAGVL*RQQSAL Trigger: AAGAGCTGATTGCTGCCTTCAAAGAACACCAGCAGC...AAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR GCA 90 bp | AGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCACAGAGGGACATAGAGCACTaGTCTCCGGGGGACATACTT | + |
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Preference number: 4 (lower is better) Translates to: SMLASCPGYCGLSLRSPQRDIEH*SPGDIL Trigger: AAGTATGTCCCCCGGAGAGCAGTGCTCTATGTCCCT...CTGTGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR TCA 90 bp | CTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCTTCCCTTGACTGTCTaGGAAGTCCGTCTTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: LIQHASKLPWVLRFVFKKLPLTV*EVRLHL Trigger: GAGATGAAGACGGACTTCTCAGACAGTCAAGGGAAG...CTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR GCA 90 bp | TCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCAACAATGTTCTGGGCCTaGTTCAGTAATGGCATGTCG | + |
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Preference number: 4 (lower is better) Translates to: SSMLASCPGYCGLSLRSPTMFWA*FSNGMS Trigger: CGACATGCCATTACTGAAGCAGGCCCAGAACATTGT...TGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR TCA 90 bp | ATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCACAGTATAGGCAAAGACCCACTTaGGGTCCAGTCTTTAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: MLASCPGYCGLSLRSPQYRQRPT*GPVFSV Trigger: AACACTAAAGACTGGACCTCAAGTGGGTCTTTGCCT...ATACTGTGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR GCA 90 bp | GAGGTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTATTCTTTTTGTTTTCTaGAACACCATCCTCGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: EVLIQHASKLPWVLRFVFILFVF*NTILAV Trigger: GACTGCGAGGATGGTGTTGCAGAAAACAAAAAGAAT...AAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR GCA 90 bp | CTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGGTCTTTGTTGCTTGTTaGACCTATGCTGGCTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: LIQHASKLPWVLRFVFKKVFVAC*TYAGSK Trigger: TTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGAC...CTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CCA 90 bp | ATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCACAGTATAGCGTAACAATGTTCTaGGCCTGCTTCAGTAATGGC | + |
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Preference number: 4 (lower is better) Translates to: MLASCPGYCGLSLRSPQYSVTMF*ACFSNG Trigger: GCCATTACTGAAGCAGGCCCAGAACATTGTTACGCT...ATACTGTGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR GCA 90 bp | ATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCACAGTATATTGAGCAAACCCATTaGAGTCTCCACAAAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: MLASCPGYCGLSLRSPQYIEQTH*SLHKGD Trigger: ATCCCCTTTGTGGAGACTGCAATGGGTTTGCTCAAT...ATACTGTGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CCA 90 bp | CTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGTGTACACAAGATCTATaGCTTGTAGGCCAAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LIQHASKLPWVLRFVFKKCTQDL*LVGQRL Trigger: AAGCCTTTGGCCTACAAGCCATAGATCTTGTGTACA...CTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR GCA 90 bp | CTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGGTCTTCAAGAGTTTTTaGTATTCTCAATCGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LIQHASKLPWVLRFVFKKVFKSF*YSQSSF Trigger: GAAGCTCGATTGAGAATAGCAAAAACTCTTGAAGAC...CTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CCA 90 bp | TCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCATTTCGGCCTTTTAAGTaGAGTGAAAATTTGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSMLASCPGYCGLSLRSPFRPFK*SENLSE Trigger: TTCAGACAAATTTTCACTCCACTTAAAAGGCCGAAA...TGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CCA 90 bp | GGGGTTGGAGTAAACTGTTCCTGTACCACTGCGATCTGGTTAGGGTaGATCACCTGTTTACCAGTGAAGCCCATGGCGGCTGCTTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: GVGVNCSCTTAIWLG*ITCLPVKPMAAASL Trigger: AAGGGAAGCAGCCGCCATGGGCTTCACTGGTAAACAGGTGATCCACCCTAACCAGATCGCAGTGGTACAGGAACAGTTTACTCCAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS TCA 90 bp | GTGGATCACCTGTTTACCAGTGAAGCCCATGGCGGCTGCTTCCCTTaGCTGTCTGAGAAGTCCGTCTTCATCTCGGAAGTCAATGTACAC | + |
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Preference number: 5 (lower is better) Translates to: VDHLFTSEAHGGCFP*LSEKSVFISEVNVH Trigger: GTGTACATTGACTTCCGAGATGAAGACGGACTTCTCAGACAGTCAAGGGAAGCAGCCGCCATGGGCTTCACTGGTAAACAGGTGATCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | GAGGTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTTCTTGGGTGTCTTTGTaGCTTGTTGCACCTATGCTG | + |
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Preference number: 5 (lower is better) Translates to: EVLIQHASKLPWVLRFVFSWVSL*LVAPML Trigger: CAGCATAGGTGCAACAAGCAACAAAGACACCCAAGA...AAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | GAGGTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTGGCATAGAGGATGTCTaGGGTGTCTTTGTTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: EVLIQHASKLPWVLRFVFGIEDV*GVFVAC Trigger: ACAAGCAACAAAGACACCCAAGACATCCTCTATGCC...AAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | ATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCAGCTGCTGGTGTTCTTaGAAGGCAGCAATCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: IQHASKLPWVLRFVFKKPSCWCS*KAAISS Trigger: AGAGCTGATTGCTGCCTTCAAAGAACACCAGCAGCT...GGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | AGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCACAGCCACTAGACACCGAGTaGATTCTCACACACTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SMLASCPGYCGLSLRSPQPLDTE*ILTHFS Trigger: GGAAAAGTGTGTGAGAATCAACTCGGTGTCTAGTGG...CTGTGGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS GCA 90 bp | CTTCTGCCGGGCATAGAGGATGTCTTGGGTGTCTTTGTTGCTTGTTaGACCTATGCTGGCTCGAAAATCTTCTCCTCCAAAAACGACTGC | + |
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Preference number: 5 (lower is better) Translates to: LLPGIEDVLGVFVAC*TYAGSKIFSSKNDC Trigger: GCAGTCGTTTTTGGAGGAGAAGATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATGCCCGGCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | ATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCCACACTGCCTTAAAATaGAGCAAACCCATTGCAGTC | + |
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Preference number: 5 (lower is better) Translates to: IQHASKLPWVLRFVFKKPHTALK*SKPIAV Trigger: GACTGCAATGGGTTTGCTCAATTTTAAGGCAGTGTG...GGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | ATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCATGTCTTGGGTGTCTTaGTTGCTTGTTGCACCTATG | + |
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Preference number: 5 (lower is better) Translates to: IQHASKLPWVLRFVFKKPMSWVS*LLVAPM Trigger: CATAGGTGCAACAAGCAACAAAGACACCCAAGACAT...GGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS TCA 90 bp | CAATGTACACAAGATCTATGGCTTGTAGGCCAAAGGCTTTTGCCGTaGCAACAACCTTCTGCCGGGCATAGAGGATGTCTTGGGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: QCTQDLWLVGQRLLP*QQPSAGHRGCLGCL Trigger: AAGACACCCAAGACATCCTCTATGCCCGGCAGAAGGTTGTTGTCACGGCAAAAGCCTTTGGCCTACAAGCCATAGATCTTGTGTACATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | CTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCGAGCTTCATTCTTTTaGTTTTCTGCAACACCATCC | + |
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Preference number: 5 (lower is better) Translates to: LIQHASKLPWVLRFVFKKRASFF*FSATPS Trigger: GGATGGTGTTGCAGAAAACAAAAAGAATGAAGCTCG...CTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | GTCCTGATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAGTCTTCAAGAGTTTTaGCTATTCTCAATCGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: VLIQHASKLPWVLRFVFKSLQEF*LFSIEL Trigger: AAGCTCGATTGAGAATAGCAAAAACTCTTGAAGACT...CTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGATCAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS-3UTR CAA 90 bp | ATCCAGCATGCTAGCAAGCTGCCCTGGGTACTGCGGTTTGTCTTTAAGAAGCCCAAGTGGAGTGAAAATTaGTCTGAAAACCATCGGATT | + |
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Preference number: 5 (lower is better) Translates to: IQHASKLPWVLRFVFKKPKWSEN*SENHRI Trigger: AATCCGATGGTTTTCAGACAAATTTTCACTCCACTT...GGGCTTCTTAAAGACAAACCGCAGTACCCAGGGCAGCTTGCTAGCATGCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CCA 90 bp | CATAGAGGATGTCTTGGGTGTCTTTGTTGCTTGTTGCACCTATGCTaGCTCGAAAATCTTCTCCTCCAAAAACGACTGCATCTAGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: HRGCLGCLCCLLHLC*LENLLLQKRLHLGK Trigger: TTTGCCTAGATGCAGTCGTTTTTGGAGGAGAAGATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS GCA 90 bp | CATTTTTCCTTGATGGATGTGGCAAGCGTAACAATGTTCTGGGCCTaGTTCAGTAATGGCATGTCGATCATACTTCCTCGGAAAGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: HFSLMDVASVTMFWA*FSNGMSIILPRKVK Trigger: CTTTACTTTCCGAGGAAGTATGATCGACATGCCATTACTGAAGCAGGCCCAGAACATTGTTACGCTTGCCACATCCATCAAGGAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS TCA 90 bp | AAATCTTCTCCTCCAAAAACGACTGCATCTAGGCAAAGACCCACTTaGGGTCCAGTCTTTAGTGTTTCTTCACACACTGCCTTAAAATTG | + |
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Preference number: 5 (lower is better) Translates to: KSSPPKTTASRQRPT*GPVFSVSSHTALKL Trigger: CAATTTTAAGGCAGTGTGTGAAGAAACACTAAAGACTGGACCTCAAGTGGGTCTTTGCCTAGATGCAGTCGTTTTTGGAGGAGAAGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CCA 72 bp | GTAAACTGTTCCTGTACCACTGCGATCTGGTTAGGGTaGATCACCTGTTTACCAGTGAAGCCCATGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: VNCSCTTAIWLG*ITCLPVKPMAA Trigger: AGCCGCCATGGGCTTCACTGGTAAACAGGTGATCCACCCTAACCAGATCGCAGTGGTACAGGAACAGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CAA 72 bp | CGTGACAACAACCTTCTGCCGGGCATAGAGGATGTCTaGGGTGTCTTTGTTGCTTGTTGCACCTATGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RDNNLLPGIEDV*GVFVACCTYAG Trigger: GCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATGCCCGGCAGAAGGTTGTTGTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CAA 90 bp | GGCTTTTGCCGTGACAACAACCTTCTGCCGGGCATAGAGGATGTCTaGGGTGTCTTTGTTGCTTGTTGCACCTATGCTGGCTCGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: GFCRDNNLLPGIEDV*GVFVACCTYAGSKI Trigger: GATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATGCCCGGCAGAAGGTTGTTGTCACGGCAAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CAA 72 bp | GCCGGGCATAGAGGATGTCTTGGGTGTCTTTGTTGCTaGTTGCACCTATGCTGGCTCGAAAATCTTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: AGHRGCLGCLCC*LHLCWLENLLL Trigger: GAGGAGAAGATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATGCCCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CAA 90 bp | CCTTCTGCCGGGCATAGAGGATGTCTTGGGTGTCTTTGTTGCTTGTaGCACCTATGCTGGCTCGAAAATCTTCTCCTCCAAAAACGACTG | + |
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Preference number: 6 (lower is better) Translates to: PSAGHRGCLGCLCCL*HLCWLENLLLQKRL Trigger: CAGTCGTTTTTGGAGGAGAAGATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATGCCCGGCAGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CAA 90 bp | AGAAATGTCTCCAGGTCGACTTCAGCCAGACCACTAGACACCGAGTaGATTCTCACACACTTTTCCGTTGTGCCCAGGTCAAAGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RNVSRSTSARPLDTE*ILTHFSVVPRSKSS Trigger: TGAAGACTTTGACCTGGGCACAACGGAAAAGTGTGTGAGAATCAACTCGGTGTCTAGTGGTCTGGCTGAAGTCGACCTGGAGACATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CAA 90 bp | CAACCTTCTGCCGGGCATAGAGGATGTCTTGGGTGTCTTTGTTGCTaGTTGCACCTATGCTGGCTCGAAAATCTTCTCCTCCAAAAACGA | + |
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Preference number: 6 (lower is better) Translates to: QPSAGHRGCLGCLCC*LHLCWLENLLLQKR Trigger: TCGTTTTTGGAGGAGAAGATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATGCCCGGCAGAAGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS TCA 72 bp | CCTCCAAAAACGACTGCATCTAGGCAAAGACCCACTTaGGGTCCAGTCTTTAGTGTTTCTTCACACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: PPKTTASRQRPT*GPVFSVSSHTA Trigger: GGCAGTGTGTGAAGAAACACTAAAGACTGGACCTCAAGTGGGTCTTTGCCTAGATGCAGTCGTTTTTGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS GCA 72 bp | TTGATGGATGTGGCAAGCGTAACAATGTTCTGGGCCTaGTTCAGTAATGGCATGTCGATCATACTTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LMDVASVTMFWA*FSNGMSIILPR Trigger: CCGAGGAAGTATGATCGACATGCCATTACTGAAGCAGGCCCAGAACATTGTTACGCTTGCCACATCCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CAA 72 bp | GGGCATAGAGGATGTCTTGGGTGTCTTTGTTGCTTGTaGCACCTATGCTGGCTCGAAAATCTTCTCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: GHRGCLGCLCCL*HLCWLENLLLQ Trigger: TTGGAGGAGAAGATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS GCA 72 bp | GGATGTCTTGGGTGTCTTTGTTGCTTGTTGCACCTATaGTGGCTCGAAAATCTTCTCCTCCAAAAACGACTG | + |
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Preference number: 6 (lower is better) Translates to: GCLGCLCCLLHL*WLENLLLQKRL Trigger: CAGTCGTTTTTGGAGGAGAAGATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS GCA 72 bp | GGCATAGAGGATGTCTTGGGTGTCTTTGTTGCTTGTTaGACCTATGCTGGCTCGAAAATCTTCTCCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GIEDVLGVFVAC*TYAGSKIFSSK Trigger: TTTGGAGGAGAAGATTTTCGAGCCAGCATAGGTGCAACAAGCAACAAAGACACCCAAGACATCCTCTATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS GCA 72 bp | TTTTTCTGGGGTTGGAGTAAACTGTTCCTGTACCACTaGGATCTGGTTAGGGTGGATCACCTGTTTACCAGT | + |
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Preference number: 6 (lower is better) Translates to: FFWGWSKLFLYH*DLVRVDHLFTS Trigger: ACTGGTAAACAGGTGATCCACCCTAACCAGATCGCAGTGGTACAGGAACAGTTTACTCCAACCCCAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS GCA 72 bp | TGCTATTCTCAATCGAGCTTCATTCTTTTTGTTTTCTaGAACACCATCCTCGCAGTCCAGCACGGCACAATC | + |
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Preference number: 6 (lower is better) Translates to: CYSQSSFILFVF*NTILAVQHGTI Trigger: GATTGTGCCGTGCTGGACTGCGAGGATGGTGTTGCAGAAAACAAAAAGAATGAAGCTCGATTGAGAATAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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| CDS CCA 72 bp | TTTTCCTTGATGGATGTGGCAAGCGTAACAATGTTCTaGGCCTGCTTCAGTAATGGCATGTCGATCATACTT | + |
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Preference number: 6 (lower is better) Translates to: FSLMDVASVTMF*ACFSNGMSIIL Trigger: AAGTATGATCGACATGCCATTACTGAAGCAGGCCCAGAACATTGTTACGCTTGCCACATCCATCAAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026625.7 |
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