Pregenerated sensors for CLVS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019785Ensembl transcript IDs: ENSMUST00000019920.13, ENSMUST00000160299.2, ENSMUST00000161692.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCCACATGGCTGGTTAATTATGTCTCCTTCTTTCTCAGCCTGCTaGTGCTTCTATGTTTGGCTGGCAAAACCTCCCATGCCTGACTCC | + |
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Preference number: 1 (lower is better) Translates to: LPHGWLIMSPSFSAC*CFYVWLAKPPMPDS Trigger: GGAGTCAGGCATGGGAGGTTTTGCCAGCCAAACATAGAAGCAGCAGCAGGCTGAGAAAGAAGGAGACATAATTAACCAGCCATGTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR GCA 90 bp | GTCCTGCCACATGGCTGGTTAATTATGTCTCCTTCTTTCTCAGCCTaGTGCTGCTTCTATGTTTGGCTGGCAAAACCTCCCATGCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: VLPHGWLIMSPSFSA*CCFYVWLAKPPMPD Trigger: GTCAGGCATGGGAGGTTTTGCCAGCCAAACATAGAAGCAGCAGCAGGCTGAGAAAGAAGGAGACATAATTAACCAGCCATGTGGCAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR CCA 90 bp | TTATGTCTCCTTCTTTCTCAGCCTGCTGCTGCTTCTATGTTTGGCTaGCAAAACCTCCCATGCCTGACTCCCAGAGTTCCTATCTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LCLLLSQPAAASMFG*QNLPCLTPRVPISF Trigger: GAAAGAGATAGGAACTCTGGGAGTCAGGCATGGGAGGTTTTGCCAGCCAAACATAGAAGCAGCAGCAGGCTGAGAAAGAAGGAGACATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR GCA 90 bp | ACCCATGGTTTAGGCAAATGTGAAAGCCAGATGTCGTGTGCATTATaGTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCACA | + |
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Preference number: 1 (lower is better) Translates to: THGLGKCESQMSCAL*YMNMSKVFQQVNPT Trigger: TGTGGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCTTTCACATTTGCCTAAACCATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| 3UTR TCA 90 bp | GCTAGTTCGAATGAGATATCTCCCCAAGGCTCAAATATCAATGTTTaGTCTCAGTTGGTTGTTTGGTCATGTTTAGGAGGAGGTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: ASSNEISPQGSNINV*SQLVVWSCLGGGVL Trigger: TAACACACCTCCTCCTAAACATGACCAAACAACCAACTGAGATCAAACATTGATATTTGAGCCTTGGGGAGATATCTCATTCGAACTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR GCA 90 bp | CTTAGTCTTCCATCCCGAGCTCATCTACCTCAATTCACTTCTTATTaGAGTCACATCAGAATGGATTCACTATATACTTGTAACTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: LSLPSRAHLPQFTSY*SHIRMDSLYTCNSH Trigger: GTGAGAGTTACAAGTATATAGTGAATCCATTCTGATGTGACTGCAATAAGAAGTGAATTGAGGTAGATGAGCTCGGGATGGAAGACTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR TCA 90 bp | GCCTTTCTTACAGGCCATCAGCTTTTTATTGAACCAATCAGAAGATaGGAGAGGGAGTGTTTACAAAATAGGATGTGTCCATATGAACAA | + |
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Preference number: 1 (lower is better) Translates to: AFLTGHQLFIEPIRR*ERECLQNRMCPYEQ Trigger: TTGTTCATATGGACACATCCTATTTTGTAAACACTCCCTCTCTCATCTTCTGATTGGTTCAATAAAAAGCTGATGGCCTGTAAGAAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR CCA 90 bp | CAAAGACTGAACTGTTTCAGGCATTTCAAACATTTTATGCTTAATTaGCTTCCCAGGAAGGTACCTTACGTTTCCAAGTCACATTCATTG | + |
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Preference number: 1 (lower is better) Translates to: QRLNCFRHFKHFMLN*LPRKVPYVSKSHSL Trigger: CAATGAATGTGACTTGGAAACGTAAGGTACCTTCCTGGGAAGCCAATTAAGCATAAAATGTTTGAAATGCCTGAAACAGTTCAGTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR TCA 90 bp | GGATACAGACACAGGTATAAGTATCAATTTGGACTGAAGATAATTTaGAGTTATAGCTTGGTGCCTCATGTGCTAGTTCGAATGAGATAT | + |
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Preference number: 1 (lower is better) Translates to: GYRHRYKYQFGLKII*SYSLVPHVLVRMRY Trigger: ATATCTCATTCGAACTAGCACATGAGGCACCAAGCTATAACTTCAAATTATCTTCAGTCCAAATTGATACTTATACCTGTGTCTGTATCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR TCA 90 bp | CAGGAGTCAACAATAATAACAGAAAACAACCCTTGGGAAAATCATTaGTGTGCAGATGCAGATAATACTACTTATCAGCTGAAATATGTG | + |
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Preference number: 1 (lower is better) Translates to: QESTIITENNPWENH*CADADNTTYQLKYV Trigger: CACATATTTCAGCTGATAAGTAGTATTATCTGCATCTGCACATCAATGATTTTCCCAAGGGTTGTTTTCTGTTATTATTGTTGACTCCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGTGTTGTCCCTGTTGCTaGAAGCCAGGACCTCCCATT | + |
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Preference number: 2 (lower is better) Translates to: SQMSCALCYMNMSKVFQQCCPCC*KPGPPI Trigger: AATGGGAGGTCCTGGCTTTCAGCAACAGGGACAACA...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| 3UTR CAA 90 bp | CCTAGCCTCTCCTCCCTGCCTTTCTTACAGGCCATCAGCTTTTTATaGAACCAATCAGAAGATGAGAGAGGGAGTGTTTACAAAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: PSLSSLPFLQAISFL*NQSEDERGSVYKIG Trigger: TCCTATTTTGTAAACACTCCCTCTCTCATCTTCTGATTGGTTCAATAAAAAGCTGATGGCCTGTAAGAAAGGCAGGGAGGAGAGGCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCCATATGAACAACAAAACCAAAGTTCAGTCTGCAGTCAACTCTGTGGGCAATAAAGCAGGCACCTaGAAGATATCACAGACCTTC | + |
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Preference number: 2 (lower is better) Translates to: CVHMNNKTKVQSAVNSVGNKAGT*KISQTF Trigger: GAAGGTCTGTGATATCTTGCAGGTGCCTGCTTTATT...GCCCACAGAGTTGACTGCAGACTGAACTTTGGTTTTGTTGTTCATATGGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCTTGTCCCTACATGTGGACCTATaGTATTTTCCATGTATCTTT | + |
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Preference number: 2 (lower is better) Translates to: SEHILHPPLFELSRFTLSLHVDL*YFPCIF Trigger: AAAGATACATGGAAAATAGCATAGGTCCACATGTAG...GGACAAGGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAGACTGAACTGTTTCAGGCATTTCAAACATTTTATGCTTAATTGGCTTCCCTCACCTTTTCAGCTATaGCTGAAGTGCCCACCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QRLNCFRHFKHFMLNWLPSPFQL*LKCPPH Trigger: ATGAGGTGGGCACTTCAGCCATAGCTGAAAAGGTGA...GGGAAGCCAATTAAGCATAAAATGTTTGAAATGCCTGAAACAGTTCAGTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTAACTGGCTCAAACATGTaGGTCAATCTTTCCCAAACT | + |
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Preference number: 2 (lower is better) Translates to: LQNAASDGSRKVPLKQKLTGSNM*VNLSQT Trigger: AGTTTGGGAAAGATTGACTCACATGTTTGAGCCAGT...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| 3UTR-3UTR GCA 90 bp | ATAAATAACGCAATGACAGTCTTTACAAAGTGTACAAAACCAGTCTTCAGCACTAGAAGACCCACATCCTaGTTTCTCTTTGCTTGTTCG | + |
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Preference number: 2 (lower is better) Translates to: INNAMTVFTKCTKPVFSTRRPTS*FLFACS Trigger: CGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTTCT...AGTGCTGAAGACTGGTTTTGTACACTTTGTAAAGACTGTCATTGCGTTATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGACTGAACTGTTTCAGGCATTTCAAACATTTTATGCTTAATTGGCTTCCCGTTGATGGGACTTACTaGTTTGGTAGAGGTAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: QRLNCFRHFKHFMLNWLPVDGTY*FGRGSV Trigger: AACACTACCTCTACCAAAGCAGTAAGTCCCATCAAC...GGGAAGCCAATTAAGCATAAAATGTTTGAAATGCCTGAAACAGTTCAGTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAGGGAGTGTTTACAAAATAGGATGTGTCCATATGAACAACAAAACCAAACTGCAGTCAACTCTGTaGGCACAGAAATCAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: ERGSVYKIGCVHMNNKTKLQSTL*AQKSTN Trigger: ATTTGTTGATTTCTGTGCCCACAGAGTTGACTGCAG...TTTGGTTTTGTTGTTCATATGGACACATCCTATTTTGTAAACACTCCCTCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGACTGAACTGTTTCAGGCATTTCAAACATTTTATGCTTAATTGGCTTCCCCATTTTCTCTCTCCTTaGCCTTATGGTTCAACTTAT | + |
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Preference number: 2 (lower is better) Translates to: QRLNCFRHFKHFMLNWLPHFLSP*PYGSTY Trigger: ATAAGTTGAACCATAAGGTCAAGGAGAGAGAAAATG...GGGAAGCCAATTAAGCATAAAATGTTTGAAATGCCTGAAACAGTTCAGTCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAATAACGCAATGACAGTCTTTACAAAGTGTACAAAACCAGTCTTCAGCACTATCCTGCTTTCTCTTTaGTTGTTCGATCCTTATTTA | + |
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Preference number: 2 (lower is better) Translates to: INNAMTVFTKCTKPVFSTILLSL*LFDPYL Trigger: TAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGAT...AGTGCTGAAGACTGGTTTTGTACACTTTGTAAAGACTGTCATTGCGTTATTTAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR TCA 72 bp | CTGCTTCTATGTTTGGCTGGCAAAACCTCCCATGCCTaGCTCCCAGAGTTCCTATCTCTTTCCAGAAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: LLLCLAGKTSHA*LPEFLSLSRSP Trigger: AGGACTTCTGGAAAGAGATAGGAACTCTGGGAGTCAGGCATGGGAGGTTTTGCCAGCCAAACATAGAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR TCA 72 bp | TGTGTGGCAGGGCAGCCATCTGAATCTAGCTCTGTTTaGCATCTGAGCATATCCTGCATCCACCCTTATTTG | + |
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Preference number: 3 (lower is better) Translates to: CVAGQPSESSSV*HLSISCIHPYL Trigger: CAAATAAGGGTGGATGCAGGATATGCTCAGATGTCAAACAGAGCTAGATTCAGATGGCTGCCCTGCCACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR GCA 72 bp | GGCTGGTTAATTATGTCTCCTTCTTTCTCAGCCTGCTaGTGCTTCTATGTTTGGCTGGCAAAACCTCCCATG | + |
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Preference number: 3 (lower is better) Translates to: GWLIMSPSFSAC*CFYVWLAKPPM Trigger: CATGGGAGGTTTTGCCAGCCAAACATAGAAGCAGCAGCAGGCTGAGAAAGAAGGAGACATAATTAACCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR GCA 72 bp | CATGGCTGGTTAATTATGTCTCCTTCTTTCTCAGCCTaGTGCTGCTTCTATGTTTGGCTGGCAAAACCTCCC | + |
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Preference number: 3 (lower is better) Translates to: HGWLIMSPSFSA*CCFYVWLAKPP Trigger: GGGAGGTTTTGCCAGCCAAACATAGAAGCAGCAGCAGGCTGAGAAAGAAGGAGACATAATTAACCAGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGACAGTGTTGTCCCTGTaGCTGAAAGCCAGGACCTCC | + |
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Preference number: 3 (lower is better) Translates to: SQMSCALCYMNMSKVFQQTVLSL*LKARTS Trigger: GGAGGTCCTGGCTTTCAGCAACAGGGACAACACTGT...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCACAGTGTaGTCCCTGTTGCTGAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: SQMSCALCYMNMSKVFQQVNPTV*SLLLKA Trigger: GGCTTTCAGCAACAGGGACAACACTGTGGGATTGAC...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| 3UTR TCA 72 bp | AAATCTAGCTCAGGGCACCCATGGTTTAGGCAAATGTaGAAGCCAGATGTCGTGTGCATTATGCTACATGAA | + |
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Preference number: 3 (lower is better) Translates to: KSSSGHPWFRQM*KPDVVCIMLHE Trigger: TTCATGTAGCATAATGCACACGACATCTGGCTTTCACATTTGCCTAAACCATGGGTGCCCTGAGCTAGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| 3UTR GCA 72 bp | TCTTCAGCACTTATATGTCCAAATAAAGCAGGCACCTaGAAGATATCACAGACCTTCCCTATTAGAAGACCC | + |
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Preference number: 3 (lower is better) Translates to: SSALICPNKAGT*KISQTFPIRRP Trigger: GGGTCTTCTAATAGGGAAGGTCTGTGATATCTTGCAGGTGCCTGCTTTATTTGGACATATAAGTGCTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR GCA 72 bp | AAAGTCCCTTTTTGTCCTTGTCCCTTTAGCAAATTTTaGACAATCTTCCAGGCCAACACTGTCTTCGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: KVPFCPCPFSKF*TIFQANTVFAN Trigger: GTTTGCGAAGACAGTGTTGGCCTGGAAGATTGTGCAAAATTTGCTAAAGGGACAAGGACAAAAAGGGACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR GCA 72 bp | TTAGGCAAATGTGAAAGCCAGATGTCGTGTGCATTATaGTACATGAACATGAGTAAAGTTTTCCAGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: LGKCESQMSCAL*YMNMSKVFQQV Trigger: GACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCTTTCACATTTGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| 3UTR CCA 72 bp | AACTATCCCATTTATACTAATCTAAGTCCTGCCACATaGCTGGTTAATTATGTCTCCTTCTTTCTCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: NYPIYTNLSPAT*LVNYVSFFLSL Trigger: CAGGCTGAGAAAGAAGGAGACATAATTAACCAGCCATGTGGCAGGACTTAGATTAGTATAAATGGGATAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| 3UTR-3UTR CAA 90 bp | TATCTGCCAGTGAACATCAATAAAGTACAAAAACATAGGGCAGTCGTTTGTGACCTAGAGCTTCTCAGATaGAGGAATTACTGGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: YLPVNINKVQKHRAVVCDLELLR*RNYWIS Trigger: AGAAATCCAGTAATTCCTCAATCTGAGAAGCTCTAG...GTCACAAACGACTGCCCTATGTTTTTGTACTTTATTGATGTTCACTGGCAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAGACTGAACTGTTTCAGGCATTTCAAACATTTTATGCTTAATTGGCTTCCCGTTAAATGGTATAGCTaGAAGTCTTCTATCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: QRLNCFRHFKHFMLNWLPVKWYS*KSSIPA Trigger: TGCTGGGATAGAAGACTTCAAGCTATACCATTTAAC...GGGAAGCCAATTAAGCATAAAATGTTTGAAATGCCTGAAACAGTTCAGTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR TCA 72 bp | CCAGGAAGGTACCTTACGTTTCCAAGTCACATTCATTaGTTTCCAATAAAACTTCCTGTTTCTATGACTACA | + |
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Preference number: 3 (lower is better) Translates to: PGRYLTFPSHIH*FPIKLPVSMTT Trigger: TGTAGTCATAGAAACAGGAAGTTTTATTGGAAATCAATGAATGTGACTTGGAAACGTAAGGTACCTTCCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR TCA 72 bp | ACAATAATAACAGAAAACAACCCTTGGGAAAATCATTaGTGTGCAGATGCAGATAATACTACTTATCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: TIITENNPWENH*CADADNTTYQL Trigger: CAGCTGATAAGTAGTATTATCTGCATCTGCACATCAATGATTTTCCCAAGGGTTGTTTTCTGTTATTATTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR GCA 90 bp | GATATCTGTGGGAAGCCAACTCCAAGATGGCGCCGGTTTCCGGTTGCCGTTGTCAACATATCCAGGTTCTaGTGCCGGTACTCAAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: DICGKPTPRWRRFPVAVVNISRF*CRYSKY Trigger: GTACTTTGAGTACCGGCAGCAGAACCTGGATATGTT...GACAACGGCAACCGGAAACCGGCGCCATCTTGGAGTTGGCTTCCCACAGATATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCATCAGCTTTTTATTGAACCAATCAGAAGATGAGAGAGGGAGTGTTTACCCTTCAGTGCCTGCTTaGTGCCAGGGTCAGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QAISFLLNQSEDERGSVYPSVPA*CQGQWP Trigger: AGGCCACTGACCCTGGCATCAAGCAGGCACTGAAGG...GTAAACACTCCCTCTCTCATCTTCTGATTGGTTCAATAAAAAGCTGATGGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR GCA 90 bp | TCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCTTGTCCCCATCCTTCAGTGCCTaGTTGATGCCAGGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SEHILHPPLFELSRFTLSPSFSA*LMPGSV Trigger: CACTGACCCTGGCATCAAGCAGGCACTGAAGGATGG...GGACAAGGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAAGTCCTAGCCTCTCCTCCCTGCCTTTCTTACAGGCCATCAGCTTTTTACTGGTGCAGAGTGTCTaGGTTCTCATTGAGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SRSPSLSSLPFLQAISFLLVQSV*VLIEFQ Trigger: CTGGAACTCAATGAGAACCCAGACACTCTGCACCAG...TAAAAAGCTGATGGCCTGTAAGAAAGGCAGGGAGGAGAGGCTAGGACTTCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR TCA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTACCTTCAGTGCCTGCTTaGTGCCAGGGTCAGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LQNAASDGSRKVPLKQKLPSVPA*CQGQWP Trigger: AGGCCACTGACCCTGGCATCAAGCAGGCACTGAAGG...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR GCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCCCATCCTTCAGTGCCTaGTTGATGCCAGGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPPSFSA*LMPGSV Trigger: CACTGACCCTGGCATCAAGCAGGCACTGAAGGATGG...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR GCA 90 bp | TTGACATCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCAAAGCCATCCTTCAGTaGCTGCTTGATGCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LTSEHILHPPLFELSRFTKAILQ*LLDARV Trigger: GACCCTGGCATCAAGCAGGCACTGAAGGATGGCTTT...GGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGATGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CCA 90 bp | TCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCTTGTCCCGGTACTCAAAGTACTaGGCCAAGAGGCGAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SEHILHPPLFELSRFTLSRYSKY*AKRRKA Trigger: AGCTTTTCGCCTCTTGGCCCAGTACTTTGAGTACCG...GGACAAGGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR TCA 90 bp | ATTCAAGCAAGGTCAGTAATTTCACAAGTACTTGATGTGTGGCAGGGCAGCCATAGTGTGTACCTGCTCTaGTCCCAGTTGGCAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: IQARSVISQVLDVWQGSHSVYLL*SQLAAK Trigger: TTTTGCTGCCAACTGGGATCAGAGCAGGTACACACT...ATGGCTGCCCTGCCACACATCAAGTACTTGTGAAATTACTGACCTTGCTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR GCA 90 bp | TTGACATCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCTCTTGGATGTCCTGGTaGAGAGTGTCTGGGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LTSEHILHPPLFELSRFTSWMSW*RVSGFS Trigger: TGAGAACCCAGACACTCTGCACCAGGACATCCAAGA...GGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGATGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR GCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCAAAGCCATCCTTCAGTaGCTGCTTGATGCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPKAILQ*LLDARV Trigger: GACCCTGGCATCAAGCAGGCACTGAAGGATGGCTTT...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR CCA 90 bp | TTGACATCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCCTGGTGCAGAGTGTCTaGGTTCTCATTGAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSEHILHPPLFELSRFTLVQSV*VLIEFQ Trigger: CTGGAACTCAATGAGAACCCAGACACTCTGCACCAG...GGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGATGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTCTCCTCCCTGCCTTTCTTACAGGCCATCAGCTTTTTATTGAACCAATCAATGTCCCTTACTTCTTaGATGTCCTGGTGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSLPFLQAISFLLNQSMSLTS*MSWCRV Trigger: CACTCTGCACCAGGACATCCAAGAAGTAAGGGACAT...TGATTGGTTCAATAAAAAGCTGATGGCCTGTAAGAAAGGCAGGGAGGAGAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAGTCCTAGCCTCTCCTCCCTGCCTTTCTTACAGGCCATCAGCTTTTTAAAGTCGCAGCATGTTTaGTGTAAGCTTAGAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSPSLSSLPFLQAISFLKSQHV*CKLRSL Trigger: CAAGCTTCTAAGCTTACACCAAACATGCTGCGACTT...TAAAAAGCTGATGGCCTGTAAGAAAGGCAGGGAGGAGAGGCTAGGACTTCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCTCAAGAAGATATCTGTGGGAAGCCAACTCCAAGATGGCGCCGGTTTCCAAGTCGCAGCATGTTTaGTGTAAGCTTAGAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSRRYLWEANSKMAPVSKSQHV*CKLRSL Trigger: CAAGCTTCTAAGCTTACACCAAACATGCTGCGACTT...GGAAACCGGCGCCATCTTGGAGTTGGCTTCCCACAGATATCTTCTTGAGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGAGTGTGTACCTGCTCTaGTCCCAGTTGGCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQMSCALCYMNMSKVFQQSVYLL*SQLAAK Trigger: TTTTGCTGCCAACTGGGATCAGAGCAGGTACACACT...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR GCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCTCTTGGATGTCCTGGTaGAGAGTGTCTGGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPSWMSW*RVSGFS Trigger: TGAGAACCCAGACACTCTGCACCAGGACATCCAAGA...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCACTTCTTGGATGTCCTaGTGCAGAGTGTCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPTSWMS*CRVSGF Trigger: GAACCCAGACACTCTGCACCAGGACATCCAAGAAGT...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCCGGTACTCAAAGTACTaGGCCAAGAGGCGAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPRYSKY*AKRRKA Trigger: AGCTTTTCGCCTCTTGGCCCAGTACTTTGAGTACCG...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR TCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCTCAAGAAGCGTAAGATaGAAGCGTCATCTGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPSRSVR*KRHLCA Trigger: TGCGCACAGATGACGCTTTCATCTTACGCTTCTTGA...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR TCA 90 bp | ATAAGTTCTCAACTTTCTGCTCAAGTCACCTTGCCTCCACTCTTTCATCACAGATCAAGAAGCGTAAGATaGAAGCGTCATCTGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISSQLSAQVTLPPLFHHRSRSVR*KRHLCA Trigger: TGCGCACAGATGACGCTTTCATCTTACGCTTCTTGA...TCTGTGATGAAAGAGTGGAGGCAAGGTGACTTGAGCAGAAAGTTGAGAACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCTTGTCCTCCTGCAATAAAGGCTaGAGACCTTCAATTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SEHILHPPLFELSRFTLSSCNKG*RPSIAS Trigger: ACTTGCAATTGAAGGTCTTCAGCCTTTATTGCAGGA...GGACAAGGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGATATCCAGGTTCTGCTaGCGGTACTCAAAGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQMSCALCYMNMSKVFQQISRFC*RYSKYW Trigger: CCAGTACTTTGAGTACCGGCAGCAGAACCTGGATAT...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR GCA 90 bp | TGTCCATATGAACAACAAAACCAAAGTTCAGTCTGCAGTCAACTCTGTGGGCACAACATATCCAGGTTCTaGTGCCGGTACTCAAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CPYEQQNQSSVCSQLCGHNISRF*CRYSKY Trigger: GTACTTTGAGTACCGGCAGCAGAACCTGGATATGTT...GTGCCCACAGAGTTGACTGCAGACTGAACTTTGGTTTTGTTGTTCATATGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR GCA 90 bp | GAAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATTATTTCCCATCCTTCAGTGCCTaGTTGATGCCAGGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EDPHPAFSLLVRSLFNYFPSFSA*LMPGSV Trigger: CACTGACCCTGGCATCAAGCAGGCACTGAAGGATGG...GAAATAATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCATGTCCCTTACTTCTTaGATGTCCTGGTGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPMSLTS*MSWCRV Trigger: CACTCTGCACCAGGACATCCAAGAAGTAAGGGACAT...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CCA 90 bp | TCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCTTGTCCTGCTCTGATCCCAGTTaGCAGCAAAAAGGACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEHILHPPLFELSRFTLSCSDPS*QQKGLK Trigger: TTTTAGTCCTTTTTGCTGCCAACTGGGATCAGAGCA...GGACAAGGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCTGTGCCCATGTCATATaGGGGCAACATTCCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPCAHVI*GQHSSK Trigger: TTTGGAGGAATGTTGCCCCCATATGACATGGGCACA...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CCA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGTCATCATCATACTCATaGTCTAGCAGGGTTCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQMSCALCYMNMSKVFQQSSSYS*SSRVRA Trigger: GGCACGAACCCTGCTAGACCATGAGTATGATGATGA...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR GCA 90 bp | GTATTCCCAAAGAAGGTGTACCATTATTGCATAAATTGCATATCACAGCTCCCATCTTGGATGTCCTGGTaGAGAGTGTCTGGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFPKKVYHYCINCISQLPSWMSW*RVSGFS Trigger: TGAGAACCCAGACACTCTGCACCAGGACATCCAAGA...TGGGAGCTGTGATATGCAATTTATGCAATAATGGTACACCTTCTTTGGGAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR GCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCAACATATCCAGGTTCTaGTGCCGGTACTCAAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPNISRF*CRYSKY Trigger: GTACTTTGAGTACCGGCAGCAGAACCTGGATATGTT...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR GCA 90 bp | CTATTAGAAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATAAAGCCATCCTTCAGTaGCTGCTTGATGCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEDPHPAFSLLVRSLFNKAILQ*LLDARV Trigger: GACCCTGGCATCAAGCAGGCACTGAAGGATGGCTTT...ATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTTCTAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR GCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCCTGAAGACCTTCAATTaGAAGTCGCAGCATGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPLKTFN*KSQHVW Trigger: CCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAG...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CCA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTACTGGTGCAGAGTGTCTaGGTTCTCATTGAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQNAASDGSRKVPLKQKLLVQSV*VLIEFQ Trigger: CTGGAACTCAATGAGAACCCAGACACTCTGCACCAG...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCATCTCTTCATGGATTTaGGGGAGAGTTCCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPISSWI*GRVPCP Trigger: TGGACAAGGAACTCTCCCCCAAATCCATGAAGAGAT...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR TCA 90 bp | CTATTAGAAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATAGTGTGTACCTGCTCTaGTCCCAGTTGGCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLEDPHPAFSLLVRSLFNSVYLL*SQLAAK Trigger: TTTTGCTGCCAACTGGGATCAGAGCAGGTACACACT...ATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTTCTAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR GCA 90 bp | GTATTCCCAAAGAAGGTGTACCATTATTGCATAAATTGCATATCACAGCTCCCAATATCCAGGTTCTGCTaGCGGTACTCAAAGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFPKKVYHYCINCISQLPISRFC*RYSKYW Trigger: CCAGTACTTTGAGTACCGGCAGCAGAACCTGGATAT...TGGGAGCTGTGATATGCAATTTATGCAATAATGGTACACCTTCTTTGGGAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CCA 90 bp | AAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATTATTTCCACTTCTTGGATGTCCTaGTGCAGAGTGTCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTHILLSLCLFDPYLIISTSWMS*CRVSGF Trigger: GAACCCAGACACTCTGCACCAGGACATCCAAGAAGT...GGAAATAATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCAGTGATGAAATTTCCTaGCCCTCAAGAAGCGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPSDEIS*PSRSVR Trigger: TCTTACGCTTCTTGAGGGCCAGGAAATTTCATCACT...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CCA 90 bp | CTATTAGAAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATCGGTACTCAAAGTACTaGGCCAAGAGGCGAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEDPHPAFSLLVRSLFNRYSKY*AKRRKA Trigger: AGCTTTTCGCCTCTTGGCCCAGTACTTTGAGTACCG...ATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTTCTAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCTGCTCTGATCCCAGTTaGCAGCAAAAAGGACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPCSDPS*QQKGLK Trigger: TTTTAGTCCTTTTTGCTGCCAACTGGGATCAGAGCA...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR TCA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTAGGTAGGATCTCAGGATaGATTAGTTGGTGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQNAASDGSRKVPLKQKLGRISG*ISWCRL Trigger: CAGTCTACACCAACTAATTCATCCTGAGATCCTACC...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR GCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCGTAAGCTTAGAAGCTTaGTTGAAGGTGAAGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPVSLEA*LKVKLL Trigger: GAGTAACTTCACCTTCAAGCAAGCTTCTAAGCTTAC...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR GCA 90 bp | ATAAGTTCTCAACTTTCTGCTCAAGTCACCTTGCCTCCACTCTTTCATCACAGAGTAAGCTTAGAAGCTTaGTTGAAGGTGAAGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: ISSQLSAQVTLPPLFHHRVSLEA*LKVKLL Trigger: GAGTAACTTCACCTTCAAGCAAGCTTCTAAGCTTAC...TCTGTGATGAAAGAGTGGAGGCAAGGTGACTTGAGCAGAAAGTTGAGAACTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGAACTGTTTCAGGCATTTCAAACATTTTATGCTTAATTGGCTTCCCATGTCCCTTACTTCTTaGATGTCCTGGTGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRLNCFRHFKHFMLNWLPMSLTS*MSWCRV Trigger: CACTCTGCACCAGGACATCCAAGAAGTAAGGGACAT...GGGAAGCCAATTAAGCATAAAATGTTTGAAATGCCTGAAACAGTTCAGTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CCA 90 bp | TTGACATCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCATTTACTTGAAGCTCTaGATCTTCAATCATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTSEHILHPPLFELSRFTIYLKL*IFNHGF Trigger: GAAGCCATGATTGAAGATCCAGAGCTTCAAGTAAAT...GGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGATGTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTAACTGAGATCTCTTCATaGATTTGGGGGAGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQNAASDGSRKVPLKQKLTEISS*IWGRVP Trigger: AGGAACTCTCCCCCAAATCCATGAAGAGATCTCAGT...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR TCA 90 bp | ATAAATAACGCAATGACAGTCTTTACAAAGTGTACAAAACCAGTCTTCAGCACTTCAAGAAGCGTAAGATaGAAGCGTCATCTGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: INNAMTVFTKCTKPVFSTSRSVR*KRHLCA Trigger: TGCGCACAGATGACGCTTTCATCTTACGCTTCTTGA...AGTGCTGAAGACTGGTTTTGTACACTTTGTAAAGACTGTCATTGCGTTATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGACAAATCCATTTACTTaGAGCTCTGGATCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SQMSCALCYMNMSKVFQQTNPFT*SSGSSI Trigger: GATTGAAGATCCAGAGCTTCAAGTAAATGGATTTGT...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGGGAGTGTTTACAAAATAGGATGTGTCCATATGAACAACAAAACCAAACTGAAGACCTTCAATTaGAAGTCGCAGCATGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERGSVYKIGCVHMNNKTKLKTFN*KSQHVW Trigger: CCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAG...TTTGGTTTTGTTGTTCATATGGACACATCCTATTTTGTAAACACTCCCTCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGAGAGCAAGTAAAGGCTaGATGTTTTCTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SQMSCALCYMNMSKVFQQRASKG*MFSSSL Trigger: AAGTGAAGAAGAAAACATGCAGCCTTTACTTGCTCT...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR CCA 90 bp | GTATTCCCAAAGAAGGTGTACCATTATTGCATAAATTGCATATCACAGCTCCCAAGTGATGAAATTTCCTaGCCCTCAAGAAGCGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFPKKVYHYCINCISQLPSDEIS*PSRSVR Trigger: TCTTACGCTTCTTGAGGGCCAGGAAATTTCATCACT...TGGGAGCTGTGATATGCAATTTATGCAATAATGGTACACCTTCTTTGGGAATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR CCA 90 bp | TATCTGCCAGTGAACATCAATAAAGTACAAAAACATAGGGCAGTCGTTTGTGACAGTGATGAAATTTCCTaGCCCTCAAGAAGCGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLPVNINKVQKHRAVVCDSDEIS*PSRSVR Trigger: TCTTACGCTTCTTGAGGGCCAGGAAATTTCATCACT...GTCACAAACGACTGCCCTATGTTTTTGTACTTTATTGATGTTCACTGGCAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCCTAAAGAAAGTAAGATaGCACGCAAAATATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPLKKVR*HAKYPP Trigger: TGGTGGATATTTTGCGTGCCATCTTACTTTCTTTAG...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR CCA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCATTTACTTGAAGCTCTaGATCTTCAATCATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCALCYMNMSKVFQQVNPIYLKL*IFNHGF Trigger: GAAGCCATGATTGAAGATCCAGAGCTTCAAGTAAAT...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTAAAGTCGCAGCATGTTTaGTGTAAGCTTAGAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQNAASDGSRKVPLKQKLKSQHV*CKLRSL Trigger: CAAGCTTCTAAGCTTACACCAAACATGCTGCGACTT...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR GCA 90 bp | GTCAGTTATCTACTGATCAACCATAAACCCAGTTATGCCACAATGAAAAAGTTTCTGAAGACCTTCAATTaGAAGTCGCAGCATGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSYLLINHKPSYATMKKFLKTFN*KSQHVW Trigger: CCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAG...AAACTTTTTCATTGTGGCATAACTGGGTTTATGGTTGATCAGTAGATAACTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CCA 90 bp | GAGAGAGGGAGTGTTTACAAAATAGGATGTGTCCATATGAACAACAAAACCAAATGCTCTGATCCCAGTTaGCAGCAAAAAGGACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERGSVYKIGCVHMNNKTKCSDPS*QQKGLK Trigger: TTTTAGTCCTTTTTGCTGCCAACTGGGATCAGAGCA...TTTGGTTTTGTTGTTCATATGGACACATCCTATTTTGTAAACACTCCCTCTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR TCA 90 bp | TATCTGCCAGTGAACATCAATAAAGTACAAAAACATAGGGCAGTCGTTTGTGACACAAATCCATTTACTTaGAGCTCTGGATCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: YLPVNINKVQKHRAVVCDTNPFT*SSGSSI Trigger: GATTGAAGATCCAGAGCTTCAAGTAAATGGATTTGT...GTCACAAACGACTGCCCTATGTTTTTGTACTTTATTGATGTTCACTGGCAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR GCA 90 bp | AAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATTATTTCCGTAAGCTTAGAAGCTTaGTTGAAGGTGAAGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KTHILLSLCLFDPYLIISVSLEA*LKVKLL Trigger: GAGTAACTTCACCTTCAAGCAAGCTTCTAAGCTTAC...GGAAATAATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CCA 90 bp | GTATTCCCAAAGAAGGTGTACCATTATTGCATAAATTGCATATCACAGCTCCCAATTTACTTGAAGCTCTaGATCTTCAATCATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFPKKVYHYCINCISQLPIYLKL*IFNHGF Trigger: GAAGCCATGATTGAAGATCCAGAGCTTCAAGTAAAT...TGGGAGCTGTGATATGCAATTTATGCAATAATGGTACACCTTCTTTGGGAATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR TCA 90 bp | CTATTAGAAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATACAAATCCATTTACTTaGAGCTCTGGATCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLEDPHPAFSLLVRSLFNTNPFT*SSGSSI Trigger: GATTGAAGATCCAGAGCTTCAAGTAAATGGATTTGT...ATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTTCTAATAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CCA 90 bp | AAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATTATTTCCCTAAAGAAAGTAAGATaGCACGCAAAATATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KTHILLSLCLFDPYLIISLKKVR*HAKYPP Trigger: TGGTGGATATTTTGCGTGCCATCTTACTTTCTTTAG...GGAAATAATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGAACTGTTTCAGGCATTTCAAACATTTTATGCTTAATTGGCTTCCCCTAAAGAAAGTAAGATaGCACGCAAAATATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLNCFRHFKHFMLNWLPLKKVR*HAKYPP Trigger: TGGTGGATATTTTGCGTGCCATCTTACTTTCTTTAG...GGGAAGCCAATTAAGCATAAAATGTTTGAAATGCCTGAAACAGTTCAGTCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| 3UTR CAA 72 bp | AGTATTCCCAAAGAAGGTGTACCATTATTGCATAAATaGCATATCACAGCTCCCATTTACCAACAAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIPKEGVPLLHK*HITAPIYQQRD Trigger: ATCTCTTTGTTGGTAAATGGGAGCTGTGATATGCAATTTATGCAATAATGGTACACCTTCTTTGGGAATACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS GCA 90 bp | GCCAGGAGACTGACCAATCCCAGGGGGCCACGGAGCCTTCTCCTGTaGTGGGTGCATATAAGCAGAGCTCCCTGGGTGTCGGGGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARRLTNPRGPRSLLL*WVHISRAPWVSGVP Trigger: GGGGACCCCCGACACCCAGGGAGCTCTGCTTATATGCACCCAGCACAGGAGAAGGCTCCGTGGCCCCCTGGGATTGGTCAGTCTCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS GCA 90 bp | CGAATTTGGCGCCAACCCCTCCCGAGCGGGTGCATGCAAATTGGGTaGCAGGAGACTGACCAATCCCAGGGGGCCACGGAGCCTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RIWRQPLPSGCMQIG*QETDQSQGATEPSP Trigger: AGGAGAAGGCTCCGTGGCCCCCTGGGATTGGTCAGTCTCCTGGCACCCAATTTGCATGCACCCGCTCGGGAGGGGTTGGCGCCAAATTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAGTCCTAGCCTCTCCTCCCTGCCTTTCTTACAGGCCATCAGCTTTTTATCCTTCAGTGCCTGCTaGATGCCAGGGTCAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRSPSLSSLPFLQAISFLSFSAC*MPGSVA Trigger: GGCCACTGACCCTGGCATCAAGCAGGCACTGAAGGA...TAAAAAGCTGATGGCCTGTAAGAAAGGCAGGGAGGAGAGGCTAGGACTTCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS GCA 90 bp | CCAGGGTCAGTGGCCTTGAAGCTTTTGAACATATCCAGGTTCTGCTaGCGGTACTCAAAGTACTGGGCCAAGAGGCGAAAAGCTTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGSVALKLLNISRFC*RYSKYWAKRRKASK Trigger: CTTCGAAGCTTTTCGCCTCTTGGCCCAGTACTTTGAGTACCGGCAGCAGAACCTGGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS GCA 90 bp | ATGCCAGGGTCAGTGGCCTTGAAGCTTTTGAACATATCCAGGTTCTaGTGCCGGTACTCAAAGTACTGGGCCAAGAGGCGAAAAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: MPGSVALKLLNISRF*CRYSKYWAKRRKAS Trigger: CGAAGCTTTTCGCCTCTTGGCCCAGTACTTTGAGTACCGGCAGCAGAACCTGGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS-3UTR CAA 90 bp | ATTCAAGCAAGGTCAGTAATTTCACAAGTACTTGATGTGTGGCAGGGCAGCCATTCCTTCAGTGCCTGCTaGATGCCAGGGTCAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IQARSVISQVLDVWQGSHSFSAC*MPGSVA Trigger: GGCCACTGACCCTGGCATCAAGCAGGCACTGAAGGA...ATGGCTGCCCTGCCACACATCAAGTACTTGTGAAATTACTGACCTTGCTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS GCA 90 bp | CACTGTCATCATCATACTCATGGTCTAGCAGGGTTCGTGCCCATGTaGCCATGTCATATGGGGGCAACATTCCTCCAAACTCAGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HCHHHTHGLAGFVPM*PCHMGATFLQTQKV Trigger: TACCTTCTGAGTTTGGAGGAATGTTGCCCCCATATGACATGGGCACATGGGCACGAACCCTGCTAGACCATGAGTATGATGATGACAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCTCCTTCAGTGCCTGCTaGATGCCAGGGTCAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCALCYMNMSKVFQQVNPSFSAC*MPGSVA Trigger: GGCCACTGACCCTGGCATCAAGCAGGCACTGAAGGA...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | TCCAGAAGTCCTAGCCTCTCCTCCCTGCCTTTCTTACAGGCCATCAGCTTTTTAGTGGCCTTGAAGCTTTaGAACATATCCAGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSPSLSSLPFLQAISFLVALKL*NISRFC Trigger: GCAGAACCTGGATATGTTCAAAAGCTTCAAGGCCAC...TAAAAAGCTGATGGCCTGTAAGAAAGGCAGGGAGGAGAGGCTAGGACTTCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CAA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCTTGGGGGAGAGTTCCTaGTCCACGTCCTTCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCALCYMNMSKVFQQVNPLGESS*STSFTG Trigger: GCCTGTGAAGGACGTGGACAAGGAACTCTCCCCCAA...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR CAA 90 bp | AGCCTCTCCTCCCTGCCTTTCTTACAGGCCATCAGCTTTTTATTGAACCAATCACATGTCCCTTACTTCTaGGATGTCCTGGTGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSSLPFLQAISFLLNQSHVPYF*DVLVQS Trigger: ACTCTGCACCAGGACATCCAAGAAGTAAGGGACATG...TGATTGGTTCAATAAAAAGCTGATGGCCTGTAAGAAAGGCAGGGAGGAGAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS TCA 90 bp | TTCTTCACTTTTATCCATTCGTTTCAGTGCTGTAGGGTCCACTACTaGCTGAGATCTCTTCATGGATTTGGGGGAGAGTTCCTTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FFTFIHSFQCCRVHY*LRSLHGFGGEFLVH Trigger: GTGGACAAGGAACTCTCCCCCAAATCCATGAAGAGATCTCAGTCAGTAGTGGACCCTACAGCACTGAAACGAATGGATAAAAGTGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGCATGTCCCTTACTTCTaGGATGTCCTGGTGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQMSCALCYMNMSKVFQQHVPYF*DVLVQS Trigger: ACTCTGCACCAGGACATCCAAGAAGTAAGGGACATG...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | GTCAGTTATCTACTGATCAACCATAAACCCAGTTATGCCACAATGAAAAAGTTTGCGGGTGCATGCAAATaGGGTGCCAGGAGACTGACC | + |
|
Preference number: 5 (lower is better) Translates to: VSYLLINHKPSYATMKKFAGACK*GARRLT Trigger: GGTCAGTCTCCTGGCACCCAATTTGCATGCACCCGC...AAACTTTTTCATTGTGGCATAACTGGGTTTATGGTTGATCAGTAGATAACTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTGGCCTTGAAGCTTTaGAACATATCCAGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQMSCALCYMNMSKVFQQVALKL*NISRFC Trigger: GCAGAACCTGGATATGTTCAAAAGCTTCAAGGCCAC...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCCCTGAAGACCTTCAATaGCAAGTCGCAGCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCALCYMNMSKVFQQVNPPEDLQ*QVAACL Trigger: CAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGG...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | TATCTGCCAGTGAACATCAATAAAGTACAAAAACATAGGGCAGTCGTTTGTGACCATGTCCCTTACTTCTaGGATGTCCTGGTGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YLPVNINKVQKHRAVVCDHVPYF*DVLVQS Trigger: ACTCTGCACCAGGACATCCAAGAAGTAAGGGACATG...GTCACAAACGACTGCCCTATGTTTTTGTACTTTATTGATGTTCACTGGCAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CAA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTACCAGGGTCAGTGGCCTaGAAGCTTTTGAACATATCC | + |
|
Preference number: 5 (lower is better) Translates to: LQNAASDGSRKVPLKQKLPGSVA*KLLNIS Trigger: GGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGG...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | TATCTGCCAGTGAACATCAATAAAGTACAAAAACATAGGGCAGTCGTTTGTGACCCAGGGTCAGTGGCCTaGAAGCTTTTGAACATATCC | + |
|
Preference number: 5 (lower is better) Translates to: YLPVNINKVQKHRAVVCDPGSVA*KLLNIS Trigger: GGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGG...GTCACAAACGACTGCCCTATGTTTTTGTACTTTATTGATGTTCACTGGCAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGAGCTTAGAAGCTTGCTaGAAGGTGAAGTTACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQMSCALCYMNMSKVFQQSLEAC*KVKLLQ Trigger: CTGGAGTAACTTCACCTTCAAGCAAGCTTCTAAGCT...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | TCTGAGCATATCCTGCATCCACCCTTATTTGAGCTCTCTAGGTTTACCTTGTCCTGTAAGCTTAGAAGCTaGCTTGAAGGTGAAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SEHILHPPLFELSRFTLSCKLRS*LEGEVT Trigger: AGTAACTTCACCTTCAAGCAAGCTTCTAAGCTTACA...GGACAAGGTAAACCTAGAGAGCTCAAATAAGGGTGGATGCAGGATATGCTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS-3UTR CAA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTAGATCTCTTCATGGATTaGGGGGAGAGTTCCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQNAASDGSRKVPLKQKLDLFMD*GESSLS Trigger: GGACAAGGAACTCTCCCCCAAATCCATGAAGAGATC...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS TCA 90 bp | TATGGGGGCAACATTCCTCCAAACTCAGAAGGTAGGATCTCAGGATaGATTAGTTGGTGTAGACTGTTCAGGTTGTTACCATGCAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: YGGNIPPNSEGRISG*ISWCRLFRLLPCKN Trigger: ATTTTTGCATGGTAACAACCTGAACAGTCTACACCAACTAATTCATCCTGAGATCCTACCTTCTGAGTTTGGAGGAATGTTGCCCCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS CCA 90 bp | GTTACCATGCAAAAATATCCTTTTCCGAGTCTTCTCTTTCAGGAATaGGCGTATCACAGTGTACAGGGCATGGATATACCAAGGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: VTMQKYPFPSLLFQE*AYHSVQGMDIPRLI Trigger: AATCAACCTTGGTATATCCATGCCCTGTACACTGTGATACGCCCATTCCTGAAAGAGAAGACTCGGAAAAGGATATTTTTGCATGGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | CTATTAGAAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATCCAGGGTCAGTGGCCTaGAAGCTTTTGAACATATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLEDPHPAFSLLVRSLFNPGSVA*KLLNIS Trigger: GGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGG...ATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTTCTAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CAA 90 bp | CTTCAGAATGCAGCCAGTGATGGTTCCAGAAAAGTTCCTCTGAAACAAAAATTAGAATTCCTCCAAATCTaGCTGGGAAGCTGTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQNAASDGSRKVPLKQKLEFLQI*LGSCPE Trigger: TTCAGGACAGCTTCCCAGCAAGATTTGGAGGAATTC...TAATTTTTGTTTCAGAGGAACTTTTCTGGAACCATCACTGGCTGCATTCTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | TATCTGCCAGTGAACATCAATAAAGTACAAAAACATAGGGCAGTCGTTTGTGACGCTGAAGACCTTCAATaGCAAGTCGCAGCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YLPVNINKVQKHRAVVCDAEDLQ*QVAACL Trigger: CAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGC...GTCACAAACGACTGCCCTATGTTTTTGTACTTTATTGATGTTCACTGGCAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS GCA 90 bp | AAAGAAACAATAGCAGTGGTGTACTCTTACCTGAAGACCTTCAATTaGAAGTCGCAGCATGTTTGGTGTAAGCTTAGAAGCTTGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KETIAVVYSYLKTFN*KSQHVWCKLRSLLE Trigger: TTCAAGCAAGCTTCTAAGCTTACACCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGGTAAGAGTACACCACTGCTATTGTTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS-3UTR CAA 90 bp | TCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGGTCAATCCCTGTAAGCTTAGAAGCTaGCTTGAAGGTGAAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SCALCYMNMSKVFQQVNPCKLRS*LEGEVT Trigger: AGTAACTTCACCTTCAAGCAAGCTTCTAAGCTTACA...GGGATTGACCTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS-3UTR CAA 90 bp | CTATTAGAAGACCCACATCCTGCTTTCTCTTTGCTTGTTCGATCCTTATTTAATAGCTTAGAAGCTTGCTaGAAGGTGAAGTTACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLEDPHPAFSLLVRSLFNSLEAC*KVKLLQ Trigger: CTGGAGTAACTTCACCTTCAAGCAAGCTTCTAAGCT...ATTAAATAAGGATCGAACAAGCAAAGAGAAAGCAGGATGTGGGTCTTCTAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR CAA 90 bp | ATAAATAACGCAATGACAGTCTTTACAAAGTGTACAAAACCAGTCTTCAGCACTCCTGAAGACCTTCAATaGCAAGTCGCAGCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: INNAMTVFTKCTKPVFSTPEDLQ*QVAACL Trigger: CAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGG...AGTGCTGAAGACTGGTTTTGTACACTTTGTAAAGACTGTCATTGCGTTATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATGTCGTGTGCATTATGCTACATGAACATGAGTAAAGTTTTCCAGCAGTGTAGACTGTTCAGGTaGTTACCATGCAAAAATATC | + |
|
Preference number: 5 (lower is better) Translates to: SQMSCALCYMNMSKVFQQCRLFR*LPCKNI Trigger: GATATTTTTGCATGGTAACAACCTGAACAGTCTACA...CTGCTGGAAAACTTTACTCATGTTCATGTAGCATAATGCACACGACATCTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
||
| CDS-3UTR CAA 90 bp | GTCAGTTATCTACTGATCAACCATAAACCCAGTTATGCCACAATGAAAAAGTTTAGCTTAGAAGCTTGCTaGAAGGTGAAGTTACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSYLLINHKPSYATMKKFSLEAC*KVKLLQ Trigger: CTGGAGTAACTTCACCTTCAAGCAAGCTTCTAAGCT...AAACTTTTTCATTGTGGCATAACTGGGTTTATGGTTGATCAGTAGATAACTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS-3UTR CAA 90 bp | ATAAATAACGCAATGACAGTCTTTACAAAGTGTACAAAACCAGTCTTCAGCACTTGTAAGCTTAGAAGCTaGCTTGAAGGTGAAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: INNAMTVFTKCTKPVFSTCKLRS*LEGEVT Trigger: AGTAACTTCACCTTCAAGCAAGCTTCTAAGCTTACA...AGTGCTGAAGACTGGTTTTGTACACTTTGTAAAGACTGTCATTGCGTTATTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
||
| CDS GCA 72 bp | CGCCAACCCCTCCCGAGCGGGTGCATGCAAATTGGGTaGCAGGAGACTGACCAATCCCAGGGGGCCACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RQPLPSGCMQIG*QETDQSQGATE Trigger: CTCCGTGGCCCCCTGGGATTGGTCAGTCTCCTGGCACCCAATTTGCATGCACCCGCTCGGGAGGGGTTGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS CCA 72 bp | ACCAATCCCAGGGGGCCACGGAGCCTTCTCCTGTGCTaGGTGCATATAAGCAGAGCTCCCTGGGTGTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TNPRGPRSLLLC*VHISRAPWVSG Trigger: CCCCGACACCCAGGGAGCTCTGCTTATATGCACCCAGCACAGGAGAAGGCTCCGTGGCCCCCTGGGATTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS GCA 72 bp | CTGACCAATCCCAGGGGGCCACGGAGCCTTCTCCTGTaGTGGGTGCATATAAGCAGAGCTCCCTGGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LTNPRGPRSLLL*WVHISRAPWVS Trigger: CGACACCCAGGGAGCTCTGCTTATATGCACCCAGCACAGGAGAAGGCTCCGTGGCCCCCTGGGATTGGTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
||
| CDS CAA 90 bp | CAATTCGAATTTGGCGCCAACCCCTCCCGAGCGGGTGCATGCAAATaGGGTGCCAGGAGACTGACCAATCCCAGGGGGCCACGGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: QFEFGANPSRAGACK*GARRLTNPRGPRSL Trigger: AAGGCTCCGTGGCCCCCTGGGATTGGTCAGTCTCCTGGCACCCAATTTGCATGCACCCGCTCGGGAGGGGTTGGCGCCAAATTCGAATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS CAA 72 bp | TCCTTCAGTGCCTGCTTGATGCCAGGGTCAGTGGCCTaGAAGCTTTTGAACATATCCAGGTTCTGCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SFSACLMPGSVA*KLLNISRFCCR Trigger: CCGGCAGCAGAACCTGGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGGCATCAAGCAGGCACTGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS CAA 90 bp | TCCTTCAGTGCCTGCTTGATGCCAGGGTCAGTGGCCTTGAAGCTTTaGAACATATCCAGGTTCTGCTGCCGGTACTCAAAGTACTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SFSACLMPGSVALKL*NISRFCCRYSKYWA Trigger: GGCCCAGTACTTTGAGTACCGGCAGCAGAACCTGGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGGCATCAAGCAGGCACTGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS CAA 72 bp | GCCTGCTTGATGCCAGGGTCAGTGGCCTTGAAGCTTTaGAACATATCCAGGTTCTGCTGCCGGTACTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ACLMPGSVALKL*NISRFCCRYSK Trigger: CTTTGAGTACCGGCAGCAGAACCTGGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGGCATCAAGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS CAA 90 bp | GGAAAGCCATCCTTCAGTGCCTGCTTGATGCCAGGGTCAGTGGCCTaGAAGCTTTTGAACATATCCAGGTTCTGCTGCCGGTACTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GKPSFSACLMPGSVA*KLLNISRFCCRYSK Trigger: CTTTGAGTACCGGCAGCAGAACCTGGATATGTTCAAAAGCTTCAAGGCCACTGACCCTGGCATCAAGCAGGCACTGAAGGATGGCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS CAA 90 bp | CAGAAAGCCAATGTCCGGCCTAGTGATGACCATGTCCCTTACTTCTaGGATGTCCTGGTGCAGAGTGTCTGGGTTCTCATTGAGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QKANVRPSDDHVPYF*DVLVQSVWVLIEFQ Trigger: CTGGAACTCAATGAGAACCCAGACACTCTGCACCAGGACATCCAAGAAGTAAGGGACATGGTCATCACTAGGCCGGACATTGGCTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS GCA 72 bp | CATCATACTCATGGTCTAGCAGGGTTCGTGCCCATGTaGCCATGTCATATGGGGGCAACATTCCTCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: HHTHGLAGFVPM*PCHMGATFLQT Trigger: AGTTTGGAGGAATGTTGCCCCCATATGACATGGGCACATGGGCACGAACCCTGCTAGACCATGAGTATGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS CCA 72 bp | GAATCCACGTTGTACTCACTGTCATCATCATACTCATaGTCTAGCAGGGTTCGTGCCCATGTGCCCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: ESTLYSLSSSYS*SSRVRAHVPMS Trigger: TGACATGGGCACATGGGCACGAACCCTGCTAGACCATGAGTATGATGATGACAGTGAGTACAACGTGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS CAA 72 bp | AATGTCCGGCCTAGTGATGACCATGTCCCTTACTTCTaGGATGTCCTGGTGCAGAGTGTCTGGGTTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: NVRPSDDHVPYF*DVLVQSVWVLI Trigger: AATGAGAACCCAGACACTCTGCACCAGGACATCCAAGAAGTAAGGGACATGGTCATCACTAGGCCGGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS TCA 72 bp | AGTGATGAAATTTCCTGGCCCTCAAGAAGCGTAAGATaGAAGCGTCATCTGTGCGCAGAAAGCCAATGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SDEISWPSRSVR*KRHLCAESQCP Trigger: CGGACATTGGCTTTCTGCGCACAGATGACGCTTTCATCTTACGCTTCTTGAGGGCCAGGAAATTTCATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS TCA 72 bp | TTTATCCATTCGTTTCAGTGCTGTAGGGTCCACTACTaGCTGAGATCTCTTCATGGATTTGGGGGAGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: FIHSFQCCRVHY*LRSLHGFGGEF Trigger: GAACTCTCCCCCAAATCCATGAAGAGATCTCAGTCAGTAGTGGACCCTACAGCACTGAAACGAATGGATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS TCA 72 bp | CCCATAGAAGCAGCAAGACATTCCTGCAATAAAGGCTaGAGACCTTCAATTGCAAGTCGCAGCATGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: PIEAARHSCNKG*RPSIASRSMFG Trigger: ACCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGCCTTTATTGCAGGAATGTCTTGCTGCTTCTATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS GCA 72 bp | AAATCTTGCTGGGAAGCTGTCCTGAAGACCTTCAATTaGAAGTCGCAGCATGTTTGGTGTAAGCTTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: KSCWEAVLKTFN*KSQHVWCKLRS Trigger: GCTTCTAAGCTTACACCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGGACAGCTTCCCAGCAAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS CCA 72 bp | GTCCTGAAGACCTTCAATTGCAAGTCGCAGCATGTTTaGTGTAAGCTTAGAAGCTTGCTTGAAGGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: VLKTFNCKSQHV*CKLRSLLEGEV Trigger: AACTTCACCTTCAAGCAAGCTTCTAAGCTTACACCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS CCA 72 bp | AGGCTGAAGACCTTCAATTGCAAGTCGCAGCATGTTTaGTGTAAGCTTAGAAGCTTGCTTGAAGGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RLKTFNCKSQHV*CKLRSLLEGEV Trigger: AACTTCACCTTCAAGCAAGCTTCTAAGCTTACACCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161692.2 |
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| CDS CCA 72 bp | CTGGATCTTCAATCATGGCTTCTAAAGAAAGTAAGATaGCACGCAAAATATCCACCAGTGTGTACCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LDLQSWLLKKVR*HAKYPPVCTCS Trigger: AGAGCAGGTACACACTGGTGGATATTTTGCGTGCCATCTTACTTTCTTTAGAAGCCATGATTGAAGATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019920.13 ENSMUST00000160299.2 ENSMUST00000161692.2 |
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| CDS CCA 72 bp | CAAAAATATCCTTTTCCGAGTCTTCTCTTTCAGGAATaGGCGTATCACAGTGTACAGGGCATGGATATACCA | + |
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Preference number: 6 (lower is better) Translates to: QKYPFPSLLFQE*AYHSVQGMDIP Trigger: TGGTATATCCATGCCCTGTACACTGTGATACGCCCATTCCTGAAAGAGAAGACTCGGAAAAGGATATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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| CDS CCA 72 bp | TACCTGAAGACCTTCAATTGCAAGTCGCAGCATGTTTaGTGTAAGCTTAGAAGCTTGCTTGAAGGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: YLKTFNCKSQHV*CKLRSLLEGEV Trigger: AACTTCACCTTCAAGCAAGCTTCTAAGCTTACACCAAACATGCTGCGACTTGCAATTGAAGGTCTTCAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160299.2 |
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| CDS TCA 72 bp | AACATTCCTCCAAACTCAGAAGGTAGGATCTCAGGATaGATTAGTTGGTGTAGACTGTTCAGGTTGTTACCA | + |
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Preference number: 6 (lower is better) Translates to: NIPPNSEGRISG*ISWCRLFRLLP Trigger: TGGTAACAACCTGAACAGTCTACACCAACTAATTCATCCTGAGATCCTACCTTCTGAGTTTGGAGGAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019920.13 |
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