Pregenerated sensors for CLUAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014232Ensembl transcript IDs: ENSMUST00000040881.14, ENSMUST00000139294.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAACCTCTTTGCCCAGCAAGTCATACAGAGAGGCTCCTTTGGCAGTaGTTTCAGACGCAAGCTGTCTGGCTGCTTTCAAATCTGCAATCT | + |
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Preference number: 1 (lower is better) Translates to: QPLCPASHTERLLWQ*FQTQAVWLLSNLQS Trigger: AGATTGCAGATTTGAAAGCAGCCAGACAGCTTGCGTCTGAAATCACTGCCAAAGGAGCCTCTCTGTATGACTTGCTGGGCAAAGAGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR GCA 90 bp | CATTGCATTATAGAGAACAGATGTGATCTTCAGCAGCTCTTTCACTaGATACCCGTCAGCTTGATAGAGCTTCTTGGTATTGAGTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: HCIIENRCDLQQLFH*IPVSLIELLGIEFY Trigger: ATAAAACTCAATACCAAGAAGCTCTATCAAGCTGACGGGTATGCAGTGAAAGAGCTGCTGAAGATCACATCTGTTCTCTATAATGCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR TCA 90 bp | CATAAAGGCCGGCCTGACACTCTGCAGGGTCTGCAGTCGCTTCCGATTTCTTTCAGGCTCCTTTGGCAGTaGTTTCAGACGCAAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: HKGRPDTLQGLQSLPISFRLLWQ*FQTQAV Trigger: GACAGCTTGCGTCTGAAATCACTGCCAAAGGAGCCT...GAAAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGTCAGGCCGGCCTTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTGTGCTGAGGCTCTTAATCTaGCTGGGCCCCTTGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: DGVVNKTHVTFPACRVPVLRLLI*LGPLAR Trigger: CCTTGCCAAGGGGCCCAGGCAGATTAAGAGCCTCAG...CACAGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCCTGACACTCTGCAGGGTCTGCAGTCGCTTCCGATTTCTTTCCAGTTCTCAGACGCAAGCTGTCTaGCTGCTTTCAAATCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: AGLTLCRVCSRFRFLSSSQTQAV*LLSNLQ Trigger: TTGCAGATTTGAAAGCAGCCAGACAGCTTGCGTCTG...AGAACTGGAAAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGTCAGGCCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR CAA 90 bp | CTCAGCTCAACCTCTTTGCCCAGCAAGTCATACAGAGAGGCTCCTTaGGCAGTGATTTCAGACGCAAGCTGTCTGGCTGCTTTCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: LSSTSLPSKSYREAP*AVISDASCLAAFKS Trigger: AGATTTGAAAGCAGCCAGACAGCTTGCGTCTGAAATCACTGCCAAAGGAGCCTCTCTGTATGACTTGCTGGGCAAAGAGGTTGAGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCCAGCAAGTCATACAGAGAGGCTCCTTTGGCAGTGATTTCAGACGCAAGCCAGCAGCTCTTTCACTaGATACCCGTCAGCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: LPSKSYREAPLAVISDASQQLFH*IPVSLI Trigger: TATCAAGCTGACGGGTATGCAGTGAAAGAGCTGCTG...GCTTGCGTCTGAAATCACTGCCAAAGGAGCCTCTCTGTATGACTTGCTGGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR TCA 90 bp | CATAAAGGCCGGCCTGACACTCTGCAGGGTCTGCAGTCGCTTCCGATTTCTTTCTATAGAGAACAGATGTaGTCTTCAGCAGCTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: HKGRPDTLQGLQSLPISFYREQM*SSAALS Trigger: TGAAAGAGCTGCTGAAGATCACATCTGTTCTCTATA...GAAAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGTCAGGCCGGCCTTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTCCTGCTCCATCCTGTGGTGATCCTCAAGCTGCTGCTCCAGGTAAGCCACCCTTTGGTCTTCATTaGATTATAGAGAACAGATGT | + |
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Preference number: 2 (lower is better) Translates to: TSPAPSCGDPQAAAPGKPPFGLH*IIENRC Trigger: ACATCTGTTCTCTATAATGCAATGAAGACCAAAGGG...TGGCTTACCTGGAGCAGCAGCTTGAGGATCACCACAGGATGGAGCAGGAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCTCAACCTCTTTGCCCAGCAAGTCATACAGAGAGGCTCCTTTGGCAGTGTTTGTGGCCATGAACTaGGCAATTGCCTTAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: LSSTSLPSKSYREAPLAVFVAMN*AIALMK Trigger: CTTCATTAAGGCAATTGCCCAGTTCATGGCCACAAA...CACTGCCAAAGGAGCCTCTCTGTATGACTTGCTGGGCAAAGAGGTTGAGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCAGACGGAGAGTATTTTCAGCTTCTTCAAACCTCTCCTGCTCCATCCTGTGGGCCAAAAGATCTTTaGTTGCAATCCTCATCACCT | + |
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Preference number: 2 (lower is better) Translates to: ASDGEYFQLLQTSPAPSCGPKDL*LQSSSP Trigger: AGGTGATGAGGATTGCAATCAAAGATCTTTTGGCCC...ACAGGATGGAGCAGGAGAGGTTTGAAGAAGCTGAAAATACTCTCCGTCTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR CAA 90 bp | TGTGGCCATGAACTGGGCAATTGCCTTAATGAAGAAAACTCTGTCTaGTTCAGTCTCAATGTCAGAAGGGATGTCAGTCTGCGGCTCATA | + |
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Preference number: 2 (lower is better) Translates to: CGHELGNCLNEENSV*FSLNVRRDVSLRLI Trigger: TATGAGCCGCAGACTGACATCCCTTCTGACATTGAGACTGAACAAGACAGAGTTTTCTTCATTAAGGCAATTGCCCAGTTCATGGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCATGAACTGGGCAATTGCCTTAATGAAGAAAACTCTGTCTTGTTCAGTCTCGAAGGGATGTCAGTCTaGGGCTCATACCTTTTCACA | + |
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Preference number: 2 (lower is better) Translates to: GHELGNCLNEENSVLFSLEGMSV*GSYLFT Trigger: TGTGAAAAGGTATGAGCCGCAGACTGACATCCCTTC...GAGACTGAACAAGACAGAGTTTTCTTCATTAAGGCAATTGCCCAGTTCATGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR CAA 90 bp | GCCAAAAGATCTTTGATTGCAATCCTCATCACCTTTTCAGTCTCATaGATCTCTAGAGGTCTAGCAATGGCTTCTGTCCTCAGTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: AKRSLIAILITFSVS*ISRGLAMASVLSSL Trigger: GAGGGAACTGAGGACAGAAGCCATTGCTAGACCTCTAGAGATCAATGAGACTGAAAAGGTGATGAGGATTGCAATCAAAGATCTTTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR GCA 90 bp | CTACATTGGAGCCCTCCATCCCTTTGGTCTTCATTGCATTATAGAGAACAGATGCATGAACTGGGCAATTaGCTTAATGAAGAAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: LHWSPPSLWSSLHYREQMHELGN*LNEENS Trigger: AGAGTTTTCTTCATTAAGGCAATTGCCCAGTTCATG...CATCTGTTCTCTATAATGCAATGAAGACCAAAGGGATGGAGGGCTCCAATGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCCCAGCAAGTCATACAGAGAGGCTCCTTTGGCAGTGATTTCAGACGCAAGCTCTTCCTCTCCTACATaGGAGCCCTCCATCCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LPSKSYREAPLAVISDASSSSPT*EPSIPL Trigger: CAAAGGGATGGAGGGCTCCAATGTAGGAGAGGAAGA...GCTTGCGTCTGAAATCACTGCCAAAGGAGCCTCTCTGTATGACTTGCTGGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTCTCCTGCTCCATCCTGTGGTGATCCTCAAGCTGCTGCTCCAGGTAAGCCATCCCTTTGGTCTTCATaGCATTATAGAGAACAGATG | + |
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Preference number: 3 (lower is better) Translates to: TSPAPSCGDPQAAAPGKPSLWSS*HYREQM Trigger: CATCTGTTCTCTATAATGCAATGAAGACCAAAGGGA...TGGCTTACCTGGAGCAGCAGCTTGAGGATCACCACAGGATGGAGCAGGAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR TCA 72 bp | TGCCCAGCAAGTCATACAGAGAGGCTCCTTTGGCAGTaGTTTCAGACGCAAGCTGTCTGGCTGCTTTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: CPASHTERLLWQ*FQTQAVWLLSN Trigger: ATTTGAAAGCAGCCAGACAGCTTGCGTCTGAAATCACTGCCAAAGGAGCCTCTCTGTATGACTTGCTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR GCA 72 bp | TTCTCATATTCATCCATAAAGGCCGGCCTGACACTCTaGAGGGTCTGCAGTCGCTTCCGATTTCTTTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: FSYSSIKAGLTL*RVCSRFRFLSS Trigger: ACTGGAAAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGTCAGGCCGGCCTTTATGGATGAATATGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCCTCAGTTCCCTCAGCTCAACCTCTTTGCCCAGCAAGTCATACAGAGAGGCTTCAAATCTGCAATCTaGGAGCCGAGATCAAACTTG | + |
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Preference number: 3 (lower is better) Translates to: CPQFPQLNLFAQQVIQRGFKSAI*EPRSNL Trigger: CAAGTTTGATCTCGGCTCCAAGATTGCAGATTTGAA...GCCTCTCTGTATGACTTGCTGGGCAAAGAGGTTGAGCTGAGGGAACTGAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR GCA 72 bp | TCATCCATAAAGGCCGGCCTGACACTCTGCAGGGTCTaGAGTCGCTTCCGATTTCTTTCCAGTTCTAATTTT | + |
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Preference number: 3 (lower is better) Translates to: SSIKAGLTLCRV*SRFRFLSSSNF Trigger: AAAATTAGAACTGGAAAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGTCAGGCCGGCCTTTATGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR GCA 72 bp | ATAGAGAACAGATGTGATCTTCAGCAGCTCTTTCACTaGATACCCGTCAGCTTGATAGAGCTTCTTGGTATT | + |
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Preference number: 3 (lower is better) Translates to: IENRCDLQQLFH*IPVSLIELLGI Trigger: AATACCAAGAAGCTCTATCAAGCTGACGGGTATGCAGTGAAAGAGCTGCTGAAGATCACATCTGTTCTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| 3UTR TCA 72 bp | GTATTTCTCCTCAAAGGATTTTCTTGTAGATTTGAATaGCTTAGAACACAGGTATGGGGATCCCAAGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: VFLLKGFSCRFE*LRTQVWGSQVL Trigger: TAACACTTGGGATCCCCATACCTGTGTTCTAAGTCATTCAAATCTACAAGAAAATCCTTTGAGGAGAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR GCA 90 bp | GCCGGCCTGACACTCTGCAGGGTCTGCAGTCGCTTCCGATTTCTTTCCAGTTCTCAGGGACCCACGGCCTaGCTGGGCCCACGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGLTLCRVCSRFRFLSSSQGPTA*LGPRLW Trigger: CCAGAGCCGTGGGCCCAGGCAGGCCGTGGGTCCCTG...AGAACTGGAAAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGTCAGGCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| CDS-3UTR CCA 90 bp | TCCATAAAGGCCGGCCTGACACTCTGCAGGGTCTGCAGTCGCTTCCGATTTCTTAGTTCTGTCAGCCCCTaGCTGGCCCAGGGACCCACG | + |
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Preference number: 4 (lower is better) Translates to: SIKAGLTLCRVCSRFRFLSSVSP*LAQGPT Trigger: CGTGGGTCCCTGGGCCAGCCAGGGGCTGACAGAACT...AAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGTCAGGCCGGCCTTTATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| CDS-3UTR CCA 90 bp | TCTGCAATCTTGGAGCCGAGATCAAACTTGAATTTGCTGATGTCTTCCTCTCCTCTGTCAGCCCCTGGCTaGCCCAGGGACCCACGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SAILEPRSNLNLLMSSSPLSAPG*PRDPRP Trigger: AGGCCGTGGGTCCCTGGGCCAGCCAGGGGCTGACAG...AGGAGAGGAAGACATCAGCAAATTCAAGTTTGATCTCGGCTCCAAGATTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| CDS-3UTR TCA 90 bp | GATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTGTGTGGGCCTTCCTTGCATaGGCACCTCCATCGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: DGVVNKTHVTFPACRVPVWAFLA*APPSLS Trigger: GGACAGCGATGGAGGTGCTCATGCAAGGAAGGCCCA...CACAGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR GCA 90 bp | CAGCCTGCCGAGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGACACTCTGCAGGGTCTaGAGTCGCTTCCGATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QPAESLCTYTSEALNLPGTLCRV*SRFRFL Trigger: AAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGT...CCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGACTCGGCAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR GCA 90 bp | TCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTGGCAAGGTCTCCACCTTGCATTaGACCCACGATCCGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SLCTYTSEALNLPGPLGKVSTLH*THDPFA Trigger: AGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGAC...CTTGCCAAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| 3UTR CAA 72 bp | ACCTCTTTGCCCAGCAAGTCATACAGAGAGGCTCCTTaGGCAGTGATTTCAGACGCAAGCTGTCTGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TSLPSKSYREAP*AVISDASCLAA Trigger: AGCAGCCAGACAGCTTGCGTCTGAAATCACTGCCAAAGGAGCCTCTCTGTATGACTTGCTGGGCAAAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| CDS-3UTR CCA 90 bp | CAGCCTGCCGAGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGTTCTCCATAGAAATATaGCGTGGGTACCCCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QPAESLCTYTSEALNLPGFSIEI*RGYPKA Trigger: AGCCTTGGGGTACCCACGCCATATTTCTATGGAGAA...CCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGACTCGGCAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR CCA 90 bp | ATAAAGGCCGGCCTGACACTCTGCAGGGTCTGCAGTCGCTTCCGATTTCTTTCCTTCTCCATAGAAATATaGCGTGGGTACCCCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: IKAGLTLCRVCSRFRFLSFSIEI*RGYPKA Trigger: AGCCTTGGGGTACCCACGCCATATTTCTATGGAGAA...GGAAAGAAATCGGAAGCGACTGCAGACCCTGCAGAGTGTCAGGCCGGCCTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| CDS-3UTR TCA 90 bp | CCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTAGGCTCCTTTGGCAGTaGTTTCAGACGCAAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PDGVVNKTHVTFPACRVPRLLWQ*FQTQAV Trigger: GACAGCTTGCGTCTGAAATCACTGCCAAAGGAGCCT...AGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR TCA 90 bp | AGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTGGCACATTGCTTCCACTCTTaGGCAGTCGCTTCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPCVPIHLRLLICLGPLAHCFHS*AVASLL Trigger: AAGAAGAGAAGCGACTGCTCAAGAGTGGAAGCAATG...TGCCAAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR CCA 90 bp | TCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTGGCAAGCAGACGCAAGCTGTCTaGCTGCTTTCAAATCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: SLCTYTSEALNLPGPLGKQTQAV*LLSNLQ Trigger: TTGCAGATTTGAAAGCAGCCAGACAGCTTGCGTCTG...CTTGCCAAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR TCA 90 bp | GCCGAGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTTTGGATGTCTATGTCTaGGTCATCATTGCTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: AESLCTYTSEALNLPGPLLDVYV*VIIAST Trigger: AGTGGAAGCAATGATGACTCAGACATAGACATCCAA...AAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGACTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR TCA 90 bp | GGGTTAAGCCCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCACTGGGCTTAGCTGGTaGGAGAGCAATGCTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: GLSPDGVVNKTHVTFPACTGLSW*ESNAFI Trigger: GATGAAAGCATTGCTCTCTCACCAGCTAAGCCCAGT...GCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGGGCTTAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR GCA 90 bp | GCTTTCAAATCTGCAATCTTGGAGCCGAGATCAAACTTGAATTTGCTGATGTCTCGGGTGCAGCCTTACTaGGGAGGTCGCGGAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: AFKSAILEPRSNLNLLMSRVQPY*GGRGKT Trigger: TGTCTTTCCGCGACCTCCGCAGTAAGGCTGCACCCG...AGACATCAGCAAATTCAAGTTTGATCTCGGCTCCAAGATTGCAGATTTGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| CDS-3UTR GCA 90 bp | AAGCCCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCAGCAGCTCTTTCACTaGATACCCGTCAGCTTGATA | + |
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Preference number: 4 (lower is better) Translates to: KPRWCSEQNTCYLSSLPSQQLFH*IPVSLI Trigger: TATCAAGCTGACGGGTATGCAGTGAAAGAGCTGCTG...ACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR GCA 90 bp | GCCGAGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTCCCTTTGGTCTTCATTaGATTATAGAGAACAGATGT | + |
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Preference number: 4 (lower is better) Translates to: AESLCTYTSEALNLPGPLPFGLH*IIENRC Trigger: ACATCTGTTCTCTATAATGCAATGAAGACCAAAGGG...AAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGACTCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR GCA 90 bp | TTGATCTCTAGAGGTCTAGCAATGGCTTCTGTCCTCAGTTCCCTCAGCTCAACCCGAACTTTCCAAAGGTaGTGTAAAGTTCTGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LISRGLAMASVLSSLSSTRTFQR*CKVLSA Trigger: GGCTGACAGAACTTTACAGCACCTTTGGAAAGTTCG...GGTTGAGCTGAGGGAACTGAGGACAGAAGCCATTGCTAGACCTCTAGAGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| CDS-3UTR CCA 90 bp | AGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTGTCATAGAAATATGGCGTaGGTACCCCAAGGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RWCSEQNTCYLSSLPSPCHRNMA*VPQGSH Trigger: ATGAGAGCCTTGGGGTACCCACGCCATATTTCTATG...ACAGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR CCA 90 bp | CTGTCTTGTTCAGTCTCAATGTCAGAAGGGATGTCAGTCTGCGGCTCATACCTTCATAGAAATATGGCGTaGGTACCCCAAGGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LSCSVSMSEGMSVCGSYLHRNMA*VPQGSH Trigger: ATGAGAGCCTTGGGGTACCCACGCCATATTTCTATG...AAGGTATGAGCCGCAGACTGACATCCCTTCTGACATTGAGACTGAACAAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
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| CDS-3UTR GCA 90 bp | ACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTGTGTACCTATACATCTGAAGGGATGTCAGTCTaGGGCTCATACCTTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: TKHMLPFQPAESLCTYTSEGMSV*GSYLFT Trigger: TGTGAAAAGGTATGAGCCGCAGACTGACATCCCTTC...AGATGTATAGGTACACAGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR CCA 90 bp | CCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTTTTGTGGCCATGAACTaGGCAATTGCCTTAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: PDGVVNKTHVTFPACRVPFVAMN*AIALMK Trigger: CTTCATTAAGGCAATTGCCCAGTTCATGGCCACAAA...AGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR TCA 90 bp | TACCTTTCCAGCCTGCCGAGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTATAGAGAACAGATGTaGTCTTCAGCAGCTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YLSSLPSPCVPIHLRLLIYREQM*SSAALS Trigger: TGAAAGAGCTGCTGAAGATCACATCTGTTCTCTATA...GATTAAGAGCCTCAGATGTATAGGTACACAGGGACTCGGCAGGCTGGAAAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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| CDS-3UTR TCA 90 bp | GTTGGGGTTAAGCCCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCGGGCCAAAAGATCTTTaGTTGCAATCCTCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VGVKPRWCSEQNTCYLSSGPKDL*LQSSSP Trigger: AGGTGATGAGGATTGCAATCAAAGATCTTTTGGCCC...GCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGGGCTTAACCCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR TCA 90 bp | CTGTATTTCTCCTCAAAGGATTTTCTTGTAGATTTGAATGACTTAGAACACAGGTGCTCCATCCTGTGGTaGTCCTCAAGCTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFSSKDFLVDLNDLEHRCSILW*SSSCCS Trigger: GGAGCAGCAGCTTGAGGATCACCACAGGATGGAGCA...CCTGTGTTCTAAGTCATTCAAATCTACAAGAAAATCCTTTGAGGAGAAATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCATGAACTGGGCAATTaGCTTAATGAAGAAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPDGVVNKTHVTFPACRVHELGN*LNEENS Trigger: AGAGTTTTCTTCATTAAGGCAATTGCCCAGTTCATG...GACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGTGTTAGGAGATAGACAAAAGAACATCTTTGTTGGGGTTAAGCCCAGAACGTCATACTGCTTCTaGAGGTCTTCCTCAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQVLGDRQKNIFVGVKPRTSYCF*RSSSTF Trigger: GAAGGTTGAGGAAGACCTGCAGAAGCAGTATGACGT...TCTGGGCTTAACCCCAACAAAGATGTTCTTTTGTCTATCTCCTAACACTTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR GCA 90 bp | ACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTGTGTACCTATACATCTCTGGTGAGAGAGCAATaGTTTCATCTTCCAAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TKHMLPFQPAESLCTYTSLVREQ*FHLPNR Trigger: ACGATTTGGAAGATGAAAGCATTGCTCTCTCACCAG...AGATGTATAGGTACACAGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CCA 90 bp | GTTGGGGTTAAGCCCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCAGCCCTCCATCCCTTTaGTCTTCATTGCATTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGVKPRWCSEQNTCYLSSSPPSL*SSLHYR Trigger: TCTATAATGCAATGAAGACCAAAGGGATGGAGGGCT...GCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGGGCTTAACCCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CCA 90 bp | GTTAAGCCCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGGATTCATCATCCTCTTaGATGTCTATGTCTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKPRWCSEQNTCYLSSLPDSSSS*MSMSES Trigger: TGACTCAGACATAGACATCCAAGAGGATGATGAATC...CGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGGGCTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| 3UTR CAA 72 bp | GAACTGGGCAATTGCCTTAATGAAGAAAACTCTGTCTaGTTCAGTCTCAATGTCAGAAGGGATGTCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELGNCLNEENSV*FSLNVRRDVSL Trigger: CAGACTGACATCCCTTCTGACATTGAGACTGAACAAGACAGAGTTTTCTTCATTAAGGCAATTGCCCAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| 3UTR CAA 72 bp | TCAAACTTGAATTTGCTGATGTCTTCCTCTCCTACATaGGAGCCCTCCATCCCTTTGGTCTTCATTGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SNLNLLMSSSPT*EPSIPLVFIAL Trigger: TAATGCAATGAAGACCAAAGGGATGGAGGGCTCCAATGTAGGAGAGGAAGACATCAGCAAATTCAAGTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| 3UTR CAA 72 bp | GCTTTCAAATCTGCAATCTTGGAGCCGAGATCAAACTaGAATTTGCTGATGTCTTCCTCTCCTACATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFKSAILEPRSN*NLLMSSSPTLE Trigger: CTCCAATGTAGGAGAGGAAGACATCAGCAAATTCAAGTTTGATCTCGGCTCCAAGATTGCAGATTTGAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| 3UTR CAA 72 bp | TCTTTGATTGCAATCCTCATCACCTTTTCAGTCTCATaGATCTCTAGAGGTCTAGCAATGGCTTCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLIAILITFSVS*ISRGLAMASVL Trigger: GAGGACAGAAGCCATTGCTAGACCTCTAGAGATCAATGAGACTGAAAAGGTGATGAGGATTGCAATCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS-3UTR GCA 90 bp | CTGTATTTCTCCTCAAAGGATTTTCTTGTAGATTTGAATGACTTAGAACACAGGGGCTGCTTTCAAATCTaGAATCTTGGAGCCGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LYFSSKDFLVDLNDLEHRGCFQI*NLGAEI Trigger: GATCTCGGCTCCAAGATTGCAGATTTGAAAGCAGCC...CCTGTGTTCTAAGTCATTCAAATCTACAAGAAAATCCTTTGAGGAGAAATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| 3UTR CAA 72 bp | AGTCTGTATTTCTCCTCAAAGGATTTTCTTGTAGATTaGAATGACTTAGAACACAGGTATGGGGATCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYFSSKDFLVD*NDLEHRYGDPK Trigger: CTTGGGATCCCCATACCTGTGTTCTAAGTCATTCAAATCTACAAGAAAATCCTTTGAGGAGAAATACAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR GCA 90 bp | CTGTATTTCTCCTCAAAGGATTTTCTTGTAGATTTGAATGACTTAGAACACAGGCAAAAGATCTTTGATTaGAATCCTCATCACCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYFSSKDFLVDLNDLEHRQKIFD*NPHHLF Trigger: GAAAAGGTGATGAGGATTGCAATCAAAGATCTTTTG...CCTGTGTTCTAAGTCATTCAAATCTACAAGAAAATCCTTTGAGGAGAAATACAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CCA 90 bp | AATCGAACTTTCCAAAGGTGCTGTAAAGTTCTGTCAGCCCCTGGCTaGCCCAGGGACCCACGGCCTGCCTGGGCCCACGGCTCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRTFQRCCKVLSAPG*PRDPRPAWAHGSGR Trigger: CCTGCCAGAGCCGTGGGCCCAGGCAGGCCGTGGGTCCCTGGGCCAGCCAGGGGCTGACAGAACTTTACAGCACCTTTGGAAAGTTCGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS GCA 90 bp | TCTCCACCTTGCATTGCACCCACGATCCGTTTGCTGGGCCTTCCTTaGATGAGCACCTCCATCGCTGTCCGAGGCTTAGACATCCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPPCIAPTIRLLGLP*MSTSIAVRGLDIRL Trigger: CAGACGGATGTCTAAGCCTCGGACAGCGATGGAGGTGCTCATGCAAGGAAGGCCCAGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS GCA 90 bp | ACTGTCCTCCGAGTCTTCGTCTTCATCCGAGTCTCCACCTTGCATTaGACCCACGATCCGTTTGCTGGGCCTTCCTTGCATGAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: TVLRVFVFIRVSTLH*THDPFAGPSLHEHL Trigger: GAGGTGCTCATGCAAGGAAGGCCCAGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGACTCGGATGAAGACGAAGACTCGGAGGACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS GCA 90 bp | ATTTCACTGTCCTCCGAGTCTTCGTCTTCATCCGAGTCTCCACCTTaGATTGCACCCACGATCCGTTTGCTGGGCCTTCCTTGCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISLSSESSSSSESPP*IAPTIRLLGLPCMS Trigger: GCTCATGCAAGGAAGGCCCAGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGACTCGGATGAAGACGAAGACTCGGAGGACAGTGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | AGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTGGCAAGTCTCCACCTTGCATaGCACCCACGATCCGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPCVPIHLRLLICLGPLASLHLA*HPRSVC Trigger: GCAAACGGATCGTGGGTGCAATGCAAGGTGGAGACT...TGCCAAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CCA 90 bp | AAGCCCAAAGTTGGGTGTGCGGAAATTCTCCATAGAAATATGGCGTaGGTACCCCAAGGCTCTCATCATCTCGGTGAAATTGCGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KPKVGCAEILHRNMA*VPQGSHHLGEIAEV Trigger: GACCTCCGCAATTTCACCGAGATGATGAGAGCCTTGGGGTACCCACGCCATATTTCTATGGAGAATTTCCGCACACCCAACTTTGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CCA 90 bp | GAGACAAGCCCAAAGTTGGGTGTGCGGAAATTCTCCATAGAAATATaGCGTGGGTACCCCAAGGCTCTCATCATCTCGGTGAAATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ETSPKLGVRKFSIEI*RGYPKALIISVKLR Trigger: CCGCAATTTCACCGAGATGATGAGAGCCTTGGGGTACCCACGCCATATTTCTATGGAGAATTTCCGCACACCCAACTTTGGGCTTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCATCATCTCGGTGAAATaGCGGAGGTCGCGGAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPDGVVNKTHVTFPACRVIISVK*RRSRKD Trigger: GTCTTTCCGCGACCTCCGCAATTTCACCGAGATGAT...GACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | GCCGAGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTTGCATACCCGTCAGCTaGATAGAGCTTCTTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: AESLCTYTSEALNLPGPLCIPVS*IELLGI Trigger: AATACCAAGAAGCTCTATCAAGCTGACGGGTATGCA...AAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGACTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CCA 90 bp | GAGACAAGCCCAAAGTTGGGTGTGCGGAAATTCTCCATAGAAATATaGCGTGGGTACCCCAAGGCTCTCATCATCTCGGTGAAATCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ETSPKLGVRKFSIEI*RGYPKALIISVKSN Trigger: GTTCGATTTCACCGAGATGATGAGAGCCTTGGGGTACCCACGCCATATTTCTATGGAGAATTTCCGCACACCCAACTTTGGGCTTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGCCGAGTCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGTTTTGGCTTCTAAGTTaGCTTCATCAGAGGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QPAESLCTYTSEALNLPGFWLLS*LHQRPH Trigger: ATGTGGCCTCTGATGAAGCAAACTTAGAAGCCAAAA...CCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGACTCGGCAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | TCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTGGCAAGATGTCTGAGTCATCATaGCTTCCACTCTTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLCTYTSEALNLPGPLGKMSESS*LPLLSS Trigger: ACTGCTCAAGAGTGGAAGCAATGATGACTCAGACAT...CTTGCCAAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS TCA 90 bp | ATCCAAGGGCTCCGGTTTACGGATCCTTCGACTGGGCTTAGCTGGTaGGAGAGCAATGCTTTCATCTTCCAAATCGTCATCATCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQGLRFTDPSTGLSW*ESNAFIFQIVIIFF Trigger: GAAGAAGATGATGACGATTTGGAAGATGAAAGCATTGCTCTCTCACCAGCTAAGCCCAGTCGAAGGATCCGTAAACCGGAGCCCTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CCA 90 bp | AAGCCCAAAGTTGGGTGTGCGGAAATTCTCCATAGAAATATGGCGTaGGTACCCCAAGGCTCTCATCATCTCGGTGAAATCGAACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPKVGCAEILHRNMA*VPQGSHHLGEIELS Trigger: GGAAAGTTCGATTTCACCGAGATGATGAGAGCCTTGGGGTACCCACGCCATATTTCTATGGAGAATTTCCGCACACCCAACTTTGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCTCATTGCTTCCACTCTaGAGCAGTCGCTTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPDGVVNKTHVTFPACRVSLLPL*SSRFSS Trigger: AGAAGAGAAGCGACTGCTCAAGAGTGGAAGCAATGA...GACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATCTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | TCCCTGTGTACCTATACATCTGAGGCTCTTAATCTGCCTGGGCCCCTTGGCAAGTCCCTTTGGTCTTCATaGCATTATAGAGAACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLCTYTSEALNLPGPLGKSLWSS*HYREQM Trigger: CATCTGTTCTCTATAATGCAATGAAGACCAAAGGGA...CTTGCCAAGGGGCCCAGGCAGATTAAGAGCCTCAGATGTATAGGTACACAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | GATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTGTGTTCAAATCTGCAATCTaGGAGCCGAGATCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGVVNKTHVTFPACRVPVFKSAI*EPRSNL Trigger: CAAGTTTGATCTCGGCTCCAAGATTGCAGATTTGAA...CACAGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | GATGGTGTAGTGAACAAAACACATGTTACCTTTCCAGCCTGCCGAGTCCCTGTGACCTTTTCAGTCTCATaGATCTCTAGAGGTCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DGVVNKTHVTFPACRVPVTFSVS*ISRGLA Trigger: TGCTAGACCTCTAGAGATCAATGAGACTGAAAAGGT...CACAGGGACTCGGCAGGCTGGAAAGGTAACATGTGTTTTGTTCACTACACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGATTTTCTTGTAGATTTGAATGACTTAGAACACAGGTATGGGGATCCCTACAGAGAGGCTCCTTaGGCAGTGATTTCAGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: SKDFLVDLNDLEHRYGDPYREAP*AVISDA Trigger: TGCGTCTGAAATCACTGCCAAAGGAGCCTCTCTGTA...GGGATCCCCATACCTGTGTTCTAAGTCATTCAAATCTACAAGAAAATCCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS-3UTR CAA 90 bp | CTGTATTTCTCCTCAAAGGATTTTCTTGTAGATTTGAATGACTTAGAACACAGGTCTTCCTCTCCTACATaGGAGCCCTCCATCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYFSSKDFLVDLNDLEHRSSSPT*EPSIPL Trigger: CAAAGGGATGGAGGGCTCCAATGTAGGAGAGGAAGA...CCTGTGTTCTAAGTCATTCAAATCTACAAGAAAATCCTTTGAGGAGAAATACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS GCA 72 bp | TCTGTCAGCCCCTGGCTGGCCCAGGGACCCACGGCCTaGCTGGGCCCACGGCTCTGGCAGGGGTCCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVSPWLAQGPTA*LGPRLWQGSGR Trigger: CCTGCCGGACCCCTGCCAGAGCCGTGGGCCCAGGCAGGCCGTGGGTCCCTGGGCCAGCCAGGGGCTGACAGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS CCA 72 bp | GCCCAGGGACCCACGGCCTGCCTGGGCCCACGGCTCTaGCAGGGGTCCGGCAGGGGAGTCTCGAGATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AQGPTACLGPRL*QGSGRGVSRSW Trigger: CCAGGATCTCGAGACTCCCCTGCCGGACCCCTGCCAGAGCCGTGGGCCCAGGCAGGCCGTGGGTCCCTGGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS CCA 72 bp | CTCTGGCAGGGGTCCGGCAGGGGAGTCTCGAGATCCTaGGAAGCCCACGGGAAAGCCGGGTGCAGCCTTACT | + |
|
Preference number: 6 (lower is better) Translates to: LWQGSGRGVSRS*EAHGKAGCSLT Trigger: AGTAAGGCTGCACCCGGCTTTCCCGTGGGCTTCCCAGGATCTCGAGACTCCCCTGCCGGACCCCTGCCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS CAA 90 bp | GTCTCCACCTTGCATTGCACCCACGATCCGTTTGCTGGGCCTTCCTaGCATGAGCACCTCCATCGCTGTCCGAGGCTTAGACATCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSTLHCTHDPFAGPS*HEHLHRCPRLRHPS Trigger: AGACGGATGTCTAAGCCTCGGACAGCGATGGAGGTGCTCATGCAAGGAAGGCCCAGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CAA 72 bp | TCCGAGTCTCCACCTTGCATTGCACCCACGATCCGTTaGCTGGGCCTTCCTTGCATGAGCACCTCCATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SESPPCIAPTIR*LGLPCMSTSIA Trigger: AGCGATGGAGGTGCTCATGCAAGGAAGGCCCAGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGACTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CAA 72 bp | CCGAGTCTTCGTCTTCATCCGAGTCTCCACCTTGCATaGCACCCACGATCCGTTTGCTGGGCCTTCCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PSLRLHPSLHLA*HPRSVCWAFLA Trigger: TGCAAGGAAGGCCCAGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGACTCGGATGAAGACGAAGACTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS GCA 72 bp | CGAGTCTTCGTCTTCATCCGAGTCTCCACCTTGCATTaGACCCACGATCCGTTTGCTGGGCCTTCCTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RVFVFIRVSTLH*THDPFAGPSLH Trigger: ATGCAAGGAAGGCCCAGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGACTCGGATGAAGACGAAGACTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CAA 90 bp | AATTTCACTGTCCTCCGAGTCTTCGTCTTCATCCGAGTCTCCACCTaGCATTGCACCCACGATCCGTTTGCTGGGCCTTCCTTGCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: NFTVLRVFVFIRVST*HCTHDPFAGPSLHE Trigger: CTCATGCAAGGAAGGCCCAGCAAACGGATCGTGGGTGCAATGCAAGGTGGAGACTCGGATGAAGACGAAGACTCGGAGGACAGTGAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CCA 72 bp | CCAAAGTTGGGTGTGCGGAAATTCTCCATAGAAATATaGCGTGGGTACCCCAAGGCTCTCATCATCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PKLGVRKFSIEI*RGYPKALIISV Trigger: CACCGAGATGATGAGAGCCTTGGGGTACCCACGCCATATTTCTATGGAGAATTTCCGCACACCCAACTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040881.14 ENSMUST00000139294.2 |
||
| CDS TCA 72 bp | CTCCGGTTTACGGATCCTTCGACTGGGCTTAGCTGGTaGGAGAGCAATGCTTTCATCTTCCAAATCGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LRFTDPSTGLSW*ESNAFIFQIVI Trigger: GATGACGATTTGGAAGATGAAAGCATTGCTCTCTCACCAGCTAAGCCCAGTCGAAGGATCCGTAAACCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
||
| CDS CCA 72 bp | GTTGGGTGTGCGGAAATTCTCCATAGAAATATGGCGTaGGTACCCCAAGGCTCTCATCATCTCGGTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: VGCAEILHRNMA*VPQGSHHLGEI Trigger: GATTTCACCGAGATGATGAGAGCCTTGGGGTACCCACGCCATATTTCTATGGAGAATTTCCGCACACCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS TCA 72 bp | TATGGCGTGGGTACCCCAAGGCTCTCATCATCTCGGTaGAATCGAACTTTCCAAAGGTGCTGTAAAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YGVGTPRLSSSR*NRTFQRCCKVL Trigger: CAGAACTTTACAGCACCTTTGGAAAGTTCGATTTCACCGAGATGATGAGAGCCTTGGGGTACCCACGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139294.2 |
||
| CDS CCA 72 bp | GTTGGGTGTGCGGAAATTCTCCATAGAAATATGGCGTaGGTACCCCAAGGCTCTCATCATCTCGGTGAAATT | + |
|
Preference number: 6 (lower is better) Translates to: VGCAEILHRNMA*VPQGSHHLGEI Trigger: AATTTCACCGAGATGATGAGAGCCTTGGGGTACCCACGCCATATTTCTATGGAGAATTTCCGCACACCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040881.14 |
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