Pregenerated sensors for CLU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022037Ensembl transcript IDs: ENSMUST00000022616.14, ENSMUST00000127387.8, ENSMUST00000128539.8, ENSMUST00000138191.8, ENSMUST00000138665.2, ENSMUST00000144619.2, ENSMUST00000153460.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGAGGCCTACTCGCCTGGAGACATGTGGAGTTCTCTAGGGGTCTaGAGCCACCTCGGGGAGCTGGGAGATTCCCTCCCAGACACTCCT | + |
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Preference number: 1 (lower is better) Translates to: GEAYSPGDMWSSLGV*SHLGELGDSLPDTP Trigger: AGGAGTGTCTGGGAGGGAATCTCCCAGCTCCCCGAGGTGGCTGCAGACCCCTAGAGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| 3UTR GCA 90 bp | CGACCAGCCCTGAGCCGCTCCTGCAGACACGTGCATAGAACTTCATaGAGGTATGCTTCAGGCAGGGCTTGCACTCCTCCCAGAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: RPALSRSCRHVHRTS*RYASGRACTPPRGP Trigger: TGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGCATACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGCGGCTCAGGGCTGGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR TCA 90 bp | CAGGCATTAGTGTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTaGGGCCTACTCGCCTGGAGACATGTGGAGTTCTCTAGGGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: QALVYRIQRKGRLLG*GLLAWRHVEFSRGL Trigger: CAGACCCCTAGAGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTACACTAATGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| 3UTR GCA 90 bp | TTAGAAACTCCTCTAGCTGCTGGCCGACCAGCCCTGAGCCGCTCCTaGAGACACGTGCATAGAACTTCATGCAGGTATGCTTCAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LETPLAAGRPALSRS*RHVHRTSCRYASGR Trigger: CCTGCCTGAAGCATACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGCGGCTCAGGGCTGGTCGGCCAGCAGCTAGAGGAGTTTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR GCA 90 bp | AGACACGTGCATAGAACTTCATGCAGGTATGCTTCAGGCAGGGCTTaGACTCCTCCCAGAGGGCCATCATGGTCTCGTTACACACTTCCG | + |
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Preference number: 1 (lower is better) Translates to: RHVHRTSCRYASGRA*TPPRGPSWSRYTLP Trigger: CGGAAGTGTGTAACGAGACCATGATGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGCATACCTGCATGAAGTTCTATGCACGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR CCA 90 bp | AGGTATGCTTCAGGCAGGGCTTGCACTCCTCCCAGAGGGCCATCATaGTCTCGTTACACACTTCCGGGAATGCCTTCAGCTTCATTTCAG | + |
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Preference number: 1 (lower is better) Translates to: RYASGRACTPPRGPS*SRYTLPGMPSASFQ Trigger: CTGAAATGAAGCTGAAGGCATTCCCGGAAGTGTGTAACGAGACCATGATGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGCATACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGCTCTGGTTTAGAAACTCCTCTAGCTGCTGGCCGACCAGCCCTGAGCCGAACTTCATGCAGGTATaGTTCAGGCAGGGCTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: GELWFRNSSSCWPTSPEPNFMQV*FRQGLH Trigger: GTGCAAGCCCTGCCTGAAGCATACCTGCATGAAGTT...CGGCTCAGGGCTGGTCGGCCAGCAGCTAGAGGAGTTTCTAAACCAGAGCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTGAGCTCTGGTTTAGAAACTCCTCTAGCTGCTGGCCGACCAGCCCTGAGCCCAGAGGGCCATCATaGTCTCGTTACACACTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: KGELWFRNSSSCWPTSPEPRGPS*SRYTLP Trigger: CGGAAGTGTGTAACGAGACCATGATGGCCCTCTGGG...CTCAGGGCTGGTCGGCCAGCAGCTAGAGGAGTTTCTAAACCAGAGCTCACCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR-3UTR GCA 90 bp | CGTTCATCCAGAAGTAGAAGGGTGAGCTCTGGTTTAGAAACTCCTCTAGCTGCTGCTCCTGCAGACACGTaGATAGAACTTCATGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: RSSRSRRVSSGLETPLAAAPADT*IELHAG Trigger: ACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGC...AGCAGCTAGAGGAGTTTCTAAACCAGAGCTCACCCTTCTACTTCTGGATGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR CAA 90 bp | ATTTCAGAATCCCTAGTGTCCTCCAGAGCATCCTCTTTCTTCTTCTaGGCTTCCTCTAAACTGTTGAGCAAGGACTTGCGCTCTGCGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ISESLVSSRASSFFF*ASSKLLSKDLRSAL Trigger: CAACGCAGAGCGCAAGTCCTTGCTCAACAGTTTAGAGGAAGCCAAGAAGAAGAAAGAGGATGCTCTGGAGGACACTAGGGATTCTGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR-3UTR GCA 90 bp | CGTTCATCCAGAAGTAGAAGGGTGAGCTCTGGTTTAGAAACTCCTCTAGCTGCTATGAGAGTTTTTATGTaGTTCACTCCCTGGACGGCG | + |
|
Preference number: 2 (lower is better) Translates to: RSSRSRRVSSGLETPLAAMRVFM*FTPWTA Trigger: CGCCGTCCAGGGAGTGAAGCACATAAAAACTCTCAT...AGCAGCTAGAGGAGTTTCTAAACCAGAGCTCACCCTTCTACTTCTGGATGAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR GCA 72 bp | TACTCGCCTGGAGACATGTGGAGTTCTCTAGGGGTCTaGAGCCACCTCGGGGAGCTGGGAGATTCCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: YSPGDMWSSLGV*SHLGELGDSLP Trigger: TGGGAGGGAATCTCCCAGCTCCCCGAGGTGGCTGCAGACCCCTAGAGAACTCCACATGTCTCCAGGCGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| 3UTR GCA 72 bp | CCTCTAGCTGCTGGCCGACCAGCCCTGAGCCGCTCCTaGAGACACGTGCATAGAACTTCATGCAGGTATGCT | + |
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Preference number: 3 (lower is better) Translates to: PLAAGRPALSRS*RHVHRTSCRYA Trigger: AGCATACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGCGGCTCAGGGCTGGTCGGCCAGCAGCTAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR CCA 72 bp | AAGGGTGAGCTCTGGTTTAGAAACTCCTCTAGCTGCTaGCCGACCAGCCCTGAGCCGCTCCTGCAGACACGT | + |
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Preference number: 3 (lower is better) Translates to: KGELWFRNSSSC*PTSPEPLLQTR Trigger: ACGTGTCTGCAGGAGCGGCTCAGGGCTGGTCGGCCAGCAGCTAGAGGAGTTTCTAAACCAGAGCTCACCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCGATGCGGTCGCCGTTCATCCAGAAGTAGAAGGGTGAGCTCTGGTTTAGAATGCTTCAGGCAGGGCTaGCACTCCTCCCAGAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SRCGRRSSRSRRVSSGLECFRQG*HSSQRA Trigger: GGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGCA...TTCTAAACCAGAGCTCACCCTTCTACTTCTGGATGAACGGCGACCGCATCGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR GCA 72 bp | CTGAGCCGCTCCTGCAGACACGTGCATAGAACTTCATaGAGGTATGCTTCAGGCAGGGCTTGCACTCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LSRSCRHVHRTS*RYASGRACTPP Trigger: GGGAGGAGTGCAAGCCCTGCCTGAAGCATACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGCGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR CCA 72 bp | TCAGGCAGGGCTTGCACTCCTCCCAGAGGGCCATCATaGTCTCGTTACACACTTCCGGGAATGCCTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SGRACTPPRGPS*SRYTLPGMPSA Trigger: AGCTGAAGGCATTCCCGGAAGTGTGTAACGAGACCATGATGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| 3UTR GCA 72 bp | CATAGAACTTCATGCAGGTATGCTTCAGGCAGGGCTTaGACTCCTCCCAGAGGGCCATCATGGTCTCGTTAC | + |
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Preference number: 3 (lower is better) Translates to: HRTSCRYASGRA*TPPRGPSWSRY Trigger: GTAACGAGACCATGATGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGCATACCTGCATGAAGTTCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| CDS-3UTR TCA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGCTGGCCGACCAGCCCTaGGCCGCTCCTGCAGACACG | + |
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Preference number: 4 (lower is better) Translates to: VQNPEEGQAAWVRPTRLELADQP*AAPADT Trigger: CGTGTCTGCAGGAGCGGCTCAGGGCTGGTCGGCCAG...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR TCA 90 bp | GGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTTCTAGTGGGAGGGAGACATaGGGCTGCGGACCAAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GRAGCLGEAYSPGDMWSSSGRET*GCGPSG Trigger: CCCGCTTGGTCCGCAGCCTCATGTCTCCCTCCCACT...AGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | AGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTGCTTCAGGCAGGGCTTaGACTCCTCCCAGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGCLGEAYSPGDMWSASGRA*TPPRGP Trigger: TGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGC...ACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR TCA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACGGGAGGGGACCTCTaGGTCAGAGGAATGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQNPEEGQAAWVRPTRLETGGDL*VRGMGG Trigger: ACCACCCATTCCTCTGACTCAGAGGTCCCCTCCCGT...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | GGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTTCTCCAGCAGGGAGTCGATaGGGTCGCCGTTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGCLGEAYSPGDMWSSPAGSR*GRRSSR Trigger: TCTGGATGAACGGCGACCGCATCGACTCCCTGCTGG...AGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | GAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGAGGACTTGGCTCTGCTaGCGGTCACTCTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESRGRAGCLGEAYSPGDMRTWLC*RSLSSR Trigger: CCTGCTGGAGAGTGACCGGCAGCAGAGCCAAGTCCT...CATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | CAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGGAAGGCTGGGCTGTaGAGCTGGACATCCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: QNPEEGQAAWVRPTRLETWKAGL*SWTSMA Trigger: GGCCATGGATGTCCAGCTCCACAGCCCAGCCTTCCA...TGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | GAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTCCACGTCTGGGAACTaGAAGGCTGGGCTGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ESRGRAGCLGEAYSPGDMSTSGN*KAGLWS Trigger: GCTCCACAGCCCAGCCTTCCAGTTCCCAGACGTGGA...CATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR TCA 90 bp | GGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTTCTGCTGGGACACCCAGTTaGACTGGTCGTTCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GRAGCLGEAYSPGDMWSSAGTPS*TGRSAA Trigger: AGCAGCTGAACGACCAGTTCAACTGGGTGTCCCAGC...AGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR TCA 90 bp | GCAGGCATTAGTGTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTTCACCACCACCTCAGTaGCACGGGAGGGGACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: AGISVQNPEEGQAAWVRPSPPPQ*HGRGPL Trigger: CAGAGGTCCCCTCCCGTGTCACTGAGGTGGTGGTGA...AGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTACACTAATGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGATGGCATCCAGGACTTaGCTCTGCTGCCGGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: VQNPEEGQAAWVRPTRLEMASRT*LCCRSL Trigger: GAGTGACCGGCAGCAGAGCCAAGTCCTGGATGCCAT...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | AGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTGGAGCTGGACATCCATaGCCTGTTGAGCCTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: RGRAGCLGEAYSPGDMWSGAGHP*PVEPGG Trigger: TCCACCAGGCTCAACAGGCCATGGATGTCCAGCTCC...ACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | AGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTTGGGAACTGGAAGGCTaGGCTGTGGAGCTGGACATC | + |
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Preference number: 4 (lower is better) Translates to: RGRAGCLGEAYSPGDMWSWELEG*AVELDI Trigger: GATGTCCAGCTCCACAGCCCAGCCTTCCAGTTCCCA...ACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR TCA 90 bp | ACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACCTGCTCCAGCAGGGATaGGGTGTTGAGCATCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: TESRGRAGCLGEAYSPGDLLQQG*GVEHLR Trigger: TCGAAGATGCTCAACACCTCATCCCTGCTGGAGCAG...GTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | GGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTTCTCCAGATCAGCAGCAGTaGCACGCACAGCAGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: GRAGCLGEAYSPGDMWSSPDQQQ*HAQQEN Trigger: ATTCTCCTGCTGTGCGTGGCACTGCTGCTGATCTGG...AGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | GCAGGTATGCTTCAGGCAGGGCTTGCACTCCTCCCAGAGGGCCATCATGGTCTCCCAGATCAGCAGCAGTaGCACGCACAGCAGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: AGMLQAGLALLPEGHHGLPDQQQ*HAQQEN Trigger: ATTCTCCTGCTGTGCGTGGCACTGCTGCTGATCTGG...GAGACCATGATGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGCATACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| CDS-3UTR GCA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGGCTCTCCCAGGACCATaGCATTGTCCCAGATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VQNPEEGQAAWVRPTRLEALPGP*HCPRSA Trigger: TGCTGATCTGGGACAATGGCATGGTCCTGGGAGAGC...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | CAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATTGTCAGAGACCTCCTaGTCTCCCAGGACCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: QNPEEGQAAWVRPTRLETLSETS*SPRTMP Trigger: TGGCATGGTCCTGGGAGAGCAGGAGGTCTCTGACAA...TGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | ACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACCCCAGAGGGCCATCATaGTCTCGTTACACACTTCCG | + |
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Preference number: 4 (lower is better) Translates to: TESRGRAGCLGEAYSPGDPRGPS*SRYTLP Trigger: CGGAAGTGTGTAACGAGACCATGATGGCCCTCTGGG...GTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | CAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATCTTCAGGCATCCTGTaGAGTTGCGGCGGATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QNPEEGQAAWVRPTRLETSSGIL*SCGGSP Trigger: AGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGA...TGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | CAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACAGACACCCAGTTGAACTaGTCGTTCAGCTGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QNPEEGQAAWVRPTRLETDTQLN*SFSCSS Trigger: GCTGGAGCAGCTGAACGACCAGTTCAACTGGGTGTC...TGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | GAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGGTGAGGTTAGCCAGCTaGGACACCCAGTTGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: ESRGRAGCLGEAYSPGDMVRLAS*DTQLNW Trigger: CCAGTTCAACTGGGTGTCCCAGCTGGCTAACCTCAC...CATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGTCTGAGTCAGAGGAATaGGTGGTCACGGTGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: VQNPEEGQAAWVRPTRLESESEE*VVTVET Trigger: GGTCTCCACCGTGACCACCCATTCCTCTGACTCAGA...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR TCA 90 bp | ACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACACATCCATGGCCTGTTaGGCCTGGTGGATCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: TESRGRAGCLGEAYSPGDTSMAC*AWWIIS Trigger: TGAGATGATCCACCAGGCTCAACAGGCCATGGATGT...GTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | GCAGGCATTAGTGTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTGGCATCCTGTGGAGTTaGGGCGGATCTCCTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: AGISVQNPEEGQAAWVRPGILWS*GGSPCT Trigger: TGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCC...AGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTACACTAATGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTTCTTTGAGCATCTTCGACTaGAAGGACTGCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRAGCLGEAYSPGDMWSSLSIFD*KDCSSS Trigger: GGAGCTGCTGCAGTCCTTCCAGTCGAAGATGCTCAA...AGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | CGACCAGCCCTGAGCCGCTCCTGCAGACACGTGCATAGAACTTCATGCAGGTATGCTCTCCCAGGACCATaGCATTGTCCCAGATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RPALSRSCRHVHRTSCRYALPGP*HCPRSA Trigger: TGCTGATCTGGGACAATGGCATGGTCCTGGGAGAGC...ATACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGCGGCTCAGGGCTGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| CDS-3UTR GCA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGAACTTCATGCAGGTATaGTTCAGGCAGGGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VQNPEEGQAAWVRPTRLENFMQV*FRQGLH Trigger: GTGCAAGCCCTGCCTGAAGCATACCTGCATGAAGTT...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS-3UTR GCA 90 bp | AGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTGCTCCTGCAGACACGTaGATAGAACTTCATGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGRAGCLGEAYSPGDMWSAPADT*IELHAG Trigger: ACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGC...ACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR GCA 90 bp | GCAGGCATTAGTGTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTTGCGGCGGATCTCCTTaGACACAGTGCGGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGISVQNPEEGQAAWVRPCGGSP*TQCGHL Trigger: AAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCA...AGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTACACTAATGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CCA 90 bp | GGCATTAGTGTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTTGTGTGGGAAGCCGATaGGGGAGAAGTAGTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GISVQNPEEGQAAWVRPTCVGSR*GRSSGG Trigger: ACCCCCACTACTTCTCCCCCATCGGCTTCCCACACA...AGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTACACTAATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CCA 90 bp | CAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACAACAGACAAGATCTCCTaGCACTTTTCACACTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QNPEEGQAAWVRPTRLETTDKIS*HFSHWP Trigger: GGGCCAGTGTGAAAAGTGCCAGGAGATCTTGTCTGT...TGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR TCA 90 bp | ACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATATACCTACTCCCTTaGGTGGACAGTTCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TESRGRAGCLGEAYSPGDIYLLP*VDSSWS Trigger: GCTCCAAGAACTGTCCACTCAAGGGAGTAGGTATAT...GTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR GCA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGATGAGAGTTTTTATGTaGTTCACTCCCTGGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VQNPEEGQAAWVRPTRLEMRVFM*FTPWTA Trigger: CGCCGTCCAGGGAGTGAAGCACATAAAAACTCTCAT...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTTCTTGGCACTTTTCACACTaGCCCTTCATCTTCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGCLGEAYSPGDMWSSWHFSH*PFIFRH Trigger: ATGCCTGAAGATGAAGGGCCAGTGTGAAAAGTGCCA...AGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CCA 90 bp | GCACTCCTCCCAGAGGGCCATCATGGTCTCGTTACACACTTCCGGGAATGCCTTTGGACAGTTCTACCTTaGAGCTCATTGTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ALLPEGHHGLVTHFRECLWTVLP*SSLSET Trigger: GGTCTCTGACAATGAGCTCCAAGGTAGAACTGTCCA...AAGGCATTCCCGGAAGTGTGTAACGAGACCATGATGGCCCTCTGGGAGGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
||
| CDS-3UTR CCA 90 bp | AATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTATCTCAAAGAAAGGCTaGAACATGTTGTGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NPEEGQAAWVRPTRLETCISKKG*NMLWKL Trigger: GAGCTTCCACAACATGTTCCAGCCTTTCTTTGAGAT...ACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | GAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGCTTCAGGCAGGGCTaGCACTCCTCCCAGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ESRGRAGCLGEAYSPGDMCFRQG*HSSQRA Trigger: GGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGCA...CATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS CCA 90 bp | ATGCCAGATGCCCGAGCAAAGCTGTCCTGCATGGCATCCAGGACTTaGCTCTGCTGCCGGTCACTCTCCAGCAGGGAGTCGATGCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MPDARAKLSCMASRT*LCCRSLSSRESMRS Trigger: CGACCGCATCGACTCCCTGCTGGAGAGTGACCGGCAGCAGAGCCAAGTCCTGGATGCCATGCAGGACAGCTTTGCTCGGGCATCTGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000153460.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACAGGCATCCTGTGGAGTaGCGGCGGATCTCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TESRGRAGCLGEAYSPGDRHPVE*RRISLH Trigger: GTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCT...GTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGTTGCGGCGGATCTCCTaGCACACAGTGCGGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VQNPEEGQAAWVRPTRLELRRIS*HTVRSS Trigger: AGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAA...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | ACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACAGCTGGGACACCCAGTaGAACTGGTCGTTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TESRGRAGCLGEAYSPGDSWDTQ*NWSFSC Trigger: GCAGCTGAACGACCAGTTCAACTGGGTGTCCCAGCT...GTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS GCA 90 bp | CCAGGACTTGGCTCTGCTGCCGGTCACTCTCCAGCAGGGAGTCGATaGGGTCGCCGTTCATCCAGAAGTAGAAGGGTGAGCTCTGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PGLGSAAGHSPAGSR*GRRSSRSRRVSSGL Trigger: TAAACCAGAGCTCACCCTTCTACTTCTGGATGAACGGCGACCGCATCGACTCCCTGCTGGAGAGTGACCGGCAGCAGAGCCAAGTCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000153460.8 |
||
| CDS GCA 90 bp | GTGTTGAGCATCTTCGACTGGAAGGACTGCAGCAGCTCCTTGTACTaGTCTGTCAGCCTCTCGGCCACCTGGAGCGAGTCGTTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSIFDWKDCSSSLY*SVSLSATWSESFSS Trigger: GGAGCTGAACGACTCGCTCCAGGTGGCCGAGAGGCTGACAGAGCAGTACAAGGAGCTGCTGCAGTCCTTCCAGTCGAAGATGCTCAACAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS GCA 90 bp | TGCTCCAGCAGGGATGAGGTGTTGAGCATCTTCGACTGGAAGGACTaGAGCAGCTCCTTGTACTGCTCTGTCAGCCTCTCGGCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSSRDEVLSIFDWKD*SSSLYCSVSLSATW Trigger: CCAGGTGGCCGAGAGGCTGACAGAGCAGTACAAGGAGCTGCTGCAGTCCTTCCAGTCGAAGATGCTCAACACCTCATCCCTGCTGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | GCAGGCATTAGTGTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTCATGGCATCCAGGACTaGGCTCTGCTGCCGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: AGISVQNPEEGQAAWVRPHGIQD*ALLPVT Trigger: AGTGACCGGCAGCAGAGCCAAGTCCTGGATGCCATG...AGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTACACTAATGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | GAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGGACATCCATGGCCTGTaGAGCCTGGTGGATCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESRGRAGCLGEAYSPGDMDIHGL*SLVDHL Trigger: GAGATGATCCACCAGGCTCAACAGGCCATGGATGTC...CATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS TCA 90 bp | GTCAAACAGCTTCACCACCACCTCAGTGACACGGGAGGGGACCTCTaGGTCAGAGGAATGGGTGGTCACGGTGGAGACCCGAAGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VKQLHHHLSDTGGDL*VRGMGGHGGDPKVV Trigger: TACTACCTTCGGGTCTCCACCGTGACCACCCATTCCTCTGACTCAGAGGTCCCCTCCCGTGTCACTGAGGTGGTGGTGAAGCTGTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | GCAGGCATTAGTGTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTGACTGCAGCAGCTCCTaGTACTGCTCTGTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGISVQNPEEGQAAWVRPDCSSS*YCSVSL Trigger: GAGGCTGACAGAGCAGTACAAGGAGCTGCTGCAGTC...AGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTACACTAATGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS TCA 90 bp | GGAACATGTTGTGGAAGCTCGGAGGCCCATAGTGGGAGGGAGACATaGGGCTGCGGACCAAGCGGGACTTGGGATATAAGAAATGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTCCGSSEAHSGRET*GCGPSGTWDIRNEA Trigger: GGCCTCATTTCTTATATCCCAAGTCCCGCTTGGTCCGCAGCCTCATGTCTCCCTCCCACTATGGGCCTCCGAGCTTCCACAACATGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022616.14 ENSMUST00000153460.8 |
||
| CDS CCA 90 bp | CCACGTCTGGGAACTGGAAGGCTGGGCTGTGGAGCTGGACATCCATaGCCTGTTGAGCCTGGTGGATCATCTCAAAGAAAGGCTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: PRLGTGRLGCGAGHP*PVEPGGSSQRKAGT Trigger: TGTTCCAGCCTTTCTTTGAGATGATCCACCAGGCTCAACAGGCCATGGATGTCCAGCTCCACAGCCCAGCCTTCCAGTTCCCAGACGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS CCA 90 bp | TCGTTCAGCTGCTCCAGCAGGGATGAGGTGTTGAGCATCTTCGACTaGAAGGACTGCAGCAGCTCCTTGTACTGCTCTGTCAGCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSCSSRDEVLSIFD*KDCSSSLYCSVSLS Trigger: CGAGAGGCTGACAGAGCAGTACAAGGAGCTGCTGCAGTCCTTCCAGTCGAAGATGCTCAACACCTCATCCCTGCTGGAGCAGCTGAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS CCA 90 bp | TCTTCGCCCTGTGTGAGGTTAGCCAGCTGGGACACCCAGTTGAACTaGTCGTTCAGCTGCTCCAGCAGGGATGAGGTGTTGAGCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSPCVRLASWDTQLN*SFSCSSRDEVLSIF Trigger: GAAGATGCTCAACACCTCATCCCTGCTGGAGCAGCTGAACGACCAGTTCAACTGGGTGTCCCAGCTGGCTAACCTCACACAGGGCGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | GTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGAGTTCTTGGAGCTCATaGTCAGAGACCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VQNPEEGQAAWVRPTRLESSWSS*SETSCS Trigger: AGAGCAGGAGGTCTCTGACAATGAGCTCCAAGAACT...CTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTCGCCTGGAGACATGTGGAGTGGGCAGGATTGTTGGTaGAACAGTCCACAGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGRAGCLGEAYSPGDMWSGQDCW*NSPQTR Trigger: TCTTGTCTGTGGACTGTTCAACCAACAATCCTGCCC...ACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS GCA 90 bp | GGCACTTTTCACACTGGCCCTTCATCTTCAGGCATCCTGTGGAGTTaGGGCGGATCTCCTTGCACACAGTGCGGTCATCTTCACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTFHTGPSSSGILWS*GGSPCTQCGHLHLL Trigger: GAGAAGGTGAAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGATGAAGGGCCAGTGTGAAAAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS CCA 90 bp | GGGACTTGGGATATAAGAAATGAGGCCTCTTGTGTGGGAAGCCGATaGGGGAGAAGTAGTGGGGGTCATGAAGCTCACGGGCGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: GTWDIRNEASCVGSR*GRSSGGHEAHGRRT Trigger: GGTTCTTCGCCCGTGAGCTTCATGACCCCCACTACTTCTCCCCCATCGGCTTCCCACACAAGAGGCCTCATTTCTTATATCCCAAGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000138191.8 ENSMUST00000153460.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTAGTGTACAGAATCCAGAGGAAGGGCAGGCTGCTTGGGTGAGGCCTACTGCCTGGGCAGGATTGTaGGTTGAACAGTCCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GISVQNPEEGQAAWVRPTAWAGL*VEQSTD Trigger: GTCTGTGGACTGTTCAACCAACAATCCTGCCCAGGC...AGTAGGCCTCACCCAAGCAGCCTGCCCTTCCTCTGGATTCTGTACACTAATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS-3UTR CAA 90 bp | AAGGGTGAGCTCTGGTTTAGAAACTCCTCTAGCTGCTGGCCGACCAGCCCTGAGCTACCTTGGAGCTCATaGTCAGAGACCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGELWFRNSSSCWPTSPELPWSS*SETSCS Trigger: AGAGCAGGAGGTCTCTGACAATGAGCTCCAAGGTAG...CTCAGGGCTGGTCGGCCAGCAGCTAGAGGAGTTTCTAAACCAGAGCTCACCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
||
| CDS-3UTR CAA 90 bp | CGACCAGCCCTGAGCCGCTCCTGCAGACACGTGCATAGAACTTCATGCAGGTATGTGGACAGTTCTACCTaGGAGCTCATTGTCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPALSRSCRHVHRTSCRYVDSST*ELIVRD Trigger: GTCTCTGACAATGAGCTCCAAGGTAGAACTGTCCAC...ATACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGCGGCTCAGGGCTGGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
||
| CDS GCA 90 bp | GGCCCTTCATCTTCAGGCATCCTGTGGAGTTGCGGCGGATCTCCTTaGACACAGTGCGGTCATCTTCACCTTCTCTTAAGAAATCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GPSSSGILWSCGGSP*TQCGHLHLLLRNPR Trigger: ACGTGGATTTCTTAAGAGAAGGTGAAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGATGAAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS CCA 90 bp | TTGGTTGAACAGTCCACAGACAAGATCTCCTGGCACTTTTCACACTaGCCCTTCATCTTCAGGCATCCTGTGGAGTTGCGGCGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVEQSTDKISWHFSH*PFIFRHPVELRRIS Trigger: GGAGATCCGCCGCAACTCCACAGGATGCCTGAAGATGAAGGGCCAGTGTGAAAAGTGCCAGGAGATCTTGTCTGTGGACTGTTCAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS GCA 90 bp | TCTTCAGGCATCCTGTGGAGTTGCGGCGGATCTCCTTGCACACAGTaGGGTCATCTTCACCTTCTCTTAAGAAATCCACGTCTGGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SSGILWSCGGSPCTQ*GHLHLLLRNPRLGT Trigger: AGTTCCCAGACGTGGATTTCTTAAGAGAAGGTGAAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS TCA 90 bp | CAAGCTGAGTCCCTTTCTTCCCATAAGAGCCTGAGGCAGGGCAGATaGATTTCCTGTGTCTCCAGAGCATATTTAACATGCCAAATACTA | + |
|
Preference number: 5 (lower is better) Translates to: QAESLSSHKSLRQGR*ISCVSRAYLTCQIL Trigger: TAGTATTTGGCATGTTAAATATGCTCTGGAGACACAGGAAATTCATCTGCCCTGCCTCAGGCTCTTATGGGAAGAAAGGGACTCAGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144619.2 |
||
| CDS CCA 72 bp | GCCCGAGCAAAGCTGTCCTGCATGGCATCCAGGACTTaGCTCTGCTGCCGGTCACTCTCCAGCAGGGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: ARAKLSCMASRT*LCCRSLSSRES Trigger: CGACTCCCTGCTGGAGAGTGACCGGCAGCAGAGCCAAGTCCTGGATGCCATGCAGGACAGCTTTGCTCGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000153460.8 |
||
| CDS TCA 72 bp | CTTCACCACCACCTCAGTGACACGGGAGGGGACCTCTaGGTCAGAGGAATGGGTGGTCACGGTGGAGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: LHHHLSDTGGDL*VRGMGGHGGDP Trigger: CGGGTCTCCACCGTGACCACCCATTCCTCTGACTCAGAGGTCCCCTCCCGTGTCACTGAGGTGGTGGTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS GCA 72 bp | GGCTCTGCTGCCGGTCACTCTCCAGCAGGGAGTCGATaGGGTCGCCGTTCATCCAGAAGTAGAAGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSAAGHSPAGSR*GRRSSRSRRVS Trigger: GCTCACCCTTCTACTTCTGGATGAACGGCGACCGCATCGACTCCCTGCTGGAGAGTGACCGGCAGCAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000153460.8 |
||
| CDS CAA 72 bp | TGGCCCGGCTGCACAGAGGAGCCAGGCTATCTGGAGTaGGAGGGGCCGAGCTCCAAGCTGAGTCCCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WPGCTEEPGYLE*EGPSSKLSPFL Trigger: AAGAAAGGGACTCAGCTTGGAGCTCGGCCCCTCCAACTCCAGATAGCCTGGCTCCTCTGTGCAGCCGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144619.2 |
||
| CDS GCA 72 bp | TCCCAGGACCATGCCATTGTCCCAGATCAGCAGCAGTaGCACGCACAGCAGGAGAATCTTCATGGCGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQDHAIVPDQQQ*HAQQENLHGVA Trigger: GGCCACGCCATGAAGATTCTCCTGCTGTGCGTGGCACTGCTGCTGATCTGGGACAATGGCATGGTCCTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144619.2 |
||
| CDS CCA 72 bp | GCCTCCTTGGAATCTGGAGTCCCCTTCTATAGACACTaGAGACAGCGAGGCCCTGGGAAGAACCATGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ASLESGVPFYRH*RQRGPGKNHGP Trigger: CGGGCCATGGTTCTTCCCAGGGCCTCGCTGTCTCCAGTGTCTATAGAAGGGGACTCCAGATTCCAAGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144619.2 |
||
| CDS CAA 72 bp | TTGTCAGAGACCTCCTGCTCTCCCAGGACCATGCCATaGTCCCAGATCAGCAGCAGTGCCACGCACAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSETSCSPRTMP*SQISSSATHSR Trigger: CCTGCTGTGCGTGGCACTGCTGCTGATCTGGGACAATGGCATGGTCCTGGGAGAGCAGGAGGTCTCTGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000138665.2 ENSMUST00000144619.2 ENSMUST00000153460.8 |
||
| CDS CAA 90 bp | GATGAGGTGTTGAGCATCTTCGACTGGAAGGACTGCAGCAGCTCCTaGTACTGCTCTGTCAGCCTCTCGGCCACCTGGAGCGAGTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DEVLSIFDWKDCSSS*YCSVSLSATWSESF Trigger: GAACGACTCGCTCCAGGTGGCCGAGAGGCTGACAGAGCAGTACAAGGAGCTGCTGCAGTCCTTCCAGTCGAAGATGCTCAACACCTCATC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS TCA 72 bp | TGGGGTCAGAGTCAAACAGCTTCACCACCACCTCAGTaGCACGGGAGGGGACCTCTGAGTCAGAGGAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: WGQSQTASPPPQ*HGRGPLSQRNG Trigger: CCCATTCCTCTGACTCAGAGGTCCCCTCCCGTGTCACTGAGGTGGTGGTGAAGCTGTTTGACTCTGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
||
| CDS GCA 72 bp | GTGTCTATGATGCCAGATGCCCGAGCAAAGCTGTCCTaGATGGCATCCAGGACTTGGCTCTGCTGCCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: VSMMPDARAKLS*MASRTWLCCRS Trigger: TGACCGGCAGCAGAGCCAAGTCCTGGATGCCATGCAGGACAGCTTTGCTCGGGCATCTGGCATCATAGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000153460.8 |
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| CDS CAA 90 bp | TGGAGCTCATTGTCAGAGACCTCCTGCTCTCCCAGGACCATGCCATaGTCCCAGATCAGCAGCAGTGCCACGCACAGCAGGAGAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: WSSLSETSCSPRTMP*SQISSSATHSRRIF Trigger: GAAGATTCTCCTGCTGTGCGTGGCACTGCTGCTGATCTGGGACAATGGCATGGTCCTGGGAGAGCAGGAGGTCTCTGACAATGAGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000138665.2 ENSMUST00000144619.2 ENSMUST00000153460.8 |
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| CDS CAA 90 bp | TACTTGTCTTCGCCCTGTGTGAGGTTAGCCAGCTGGGACACCCAGTaGAACTGGTCGTTCAGCTGCTCCAGCAGGGATGAGGTGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: YLSSPCVRLASWDTQ*NWSFSCSSRDEVLS Trigger: GCTCAACACCTCATCCCTGCTGGAGCAGCTGAACGACCAGTTCAACTGGGTGTCCCAGCTGGCTAACCTCACACAGGGCGAAGACAAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS GCA 72 bp | GAACCGGTCCTGAAAGAGCGTGTCTATGATGCCAGATaGCCGAGCAAAGCTGTCCTGCATGGCATCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: EPVLKERVYDAR*PSKAVLHGIQD Trigger: GTCCTGGATGCCATGCAGGACAGCTTTGCTCGGGCATCTGGCATCATAGACACGCTCTTTCAGGACCGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000153460.8 |
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| CDS GCA 72 bp | CACACTGGCCCTTCATCTTCAGGCATCCTGTGGAGTTaGGGCGGATCTCCTTGCACACAGTGCGGTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: HTGPSSSGILWS*GGSPCTQCGHL Trigger: AAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGATGAAGGGCCAGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS CCA 72 bp | TCAGCAGCAGTGCCACGCACAGCAGGAGAATCTTCATaGCGTGGCCTCCTTGGAATCTGGAGTCCCCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SAAVPRTAGESS*RGLLGIWSPLL Trigger: TAGAAGGGGACTCCAGATTCCAAGGAGGCCACGCCATGAAGATTCTCCTGCTGTGCGTGGCACTGCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144619.2 |
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| CDS CAA 90 bp | ACCCAGTTGAACTGGTCGTTCAGCTGCTCCAGCAGGGATGAGGTGTaGAGCATCTTCGACTGGAAGGACTGCAGCAGCTCCTTGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: TQLNWSFSCSSRDEV*SIFDWKDCSSSLYC Trigger: GCAGTACAAGGAGCTGCTGCAGTCCTTCCAGTCGAAGATGCTCAACACCTCATCCCTGCTGGAGCAGCTGAACGACCAGTTCAACTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS GCA 72 bp | GTGGACAGTTCTTGGAGCTCATTGTCAGAGACCTCCTaGTCTCCCAGGACCATGCCATTGTCCCAGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VDSSWSSLSETS*SPRTMPLSQIS Trigger: GCTGATCTGGGACAATGGCATGGTCCTGGGAGAGCAGGAGGTCTCTGACAATGAGCTCCAAGAACTGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000144619.2 ENSMUST00000153460.8 |
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| CDS CCA 72 bp | GGAACTGGAAGGCTGGGCTGTGGAGCTGGACATCCATaGCCTGTTGAGCCTGGTGGATCATCTCAAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: GTGRLGCGAGHP*PVEPGGSSQRK Trigger: CTTTCTTTGAGATGATCCACCAGGCTCAACAGGCCATGGATGTCCAGCTCCACAGCCCAGCCTTCCAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS CCA 72 bp | ACTTTTCACACTGGCCCTTCATCTTCAGGCATCCTGTaGAGTTGCGGCGGATCTCCTTGCACACAGTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: TFHTGPSSSGIL*SCGGSPCTQCG Trigger: ACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGATGAAGGGCCAGTGTGAAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS CCA 72 bp | TGCTCCAGCAGGGATGAGGTGTTGAGCATCTTCGACTaGAAGGACTGCAGCAGCTCCTTGTACTGCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: CSSRDEVLSIFD*KDCSSSLYCSV Trigger: GACAGAGCAGTACAAGGAGCTGCTGCAGTCCTTCCAGTCGAAGATGCTCAACACCTCATCCCTGCTGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS CAA 72 bp | TTCAGCTCCTGGCGCAGGTTAGCCTGGGCAGGATTGTaGGTTGAACAGTCCACAGACAAGATCTCCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: FSSWRRLAWAGL*VEQSTDKISWH Trigger: GTGCCAGGAGATCTTGTCTGTGGACTGTTCAACCAACAATCCTGCCCAGGCTAACCTGCGCCAGGAGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS CAA 90 bp | TGGCACTTTTCACACTGGCCCTTCATCTTCAGGCATCCTGTGGAGTaGCGGCGGATCTCCTTGCACACAGTGCGGTCATCTTCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: WHFSHWPFIFRHPVE*RRISLHTVRSSSPS Trigger: AGAAGGTGAAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGATGAAGGGCCAGTGTGAAAAGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS CAA 90 bp | TGGAGCGAGTCGTTCAGCTCCTGGCGCAGGTTAGCCTGGGCAGGATaGTTGGTTGAACAGTCCACAGACAAGATCTCCTGGCACTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: WSESFSSWRRLAWAG*LVEQSTDKISWHFS Trigger: TGAAAAGTGCCAGGAGATCTTGTCTGTGGACTGTTCAACCAACAATCCTGCCCAGGCTAACCTGCGCCAGGAGCTGAACGACTCGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS GCA 72 bp | ACAGTTCTACCTTGGAGCTCATTGTCAGAGACCTCCTaGTCTCCCAGGACCATGCCATTGTCCCAGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: TVLPWSSLSETS*SPRTMPLSQIS Trigger: GCTGATCTGGGACAATGGCATGGTCCTGGGAGAGCAGGAGGTCTCTGACAATGAGCTCCAAGGTAGAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| CDS CCA 72 bp | TCTTCACCTTCTCTTAAGAAATCCACGTCTGGGAACTaGAAGGCTGGGCTGTGGAGCTGGACATCCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSPSLKKSTSGN*KAGLWSWTSMA Trigger: GGCCATGGATGTCCAGCTCCACAGCCCAGCCTTCCAGTTCCCAGACGTGGATTTCTTAAGAGAAGGTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS CAA 72 bp | TACTCCCTTGAGTGGACAGTTCTACCTTGGAGCTCATaGTCAGAGACCTCCTGCTCTCCCAGGACCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: YSLEWTVLPWSS*SETSCSPRTMP Trigger: TGGCATGGTCCTGGGAGAGCAGGAGGTCTCTGACAATGAGCTCCAAGGTAGAACTGTCCACTCAAGGGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138665.2 |
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| CDS GCA 72 bp | TCTTCAGGCATCCTGTGGAGTTGCGGCGGATCTCCTTaGACACAGTGCGGTCATCTTCACCTTCTCTTAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSGILWSCGGSP*TQCGHLHLLLR Trigger: TCTTAAGAGAAGGTGAAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS GCA 72 bp | ATCCTGTGGAGTTGCGGCGGATCTCCTTGCACACAGTaGGGTCATCTTCACCTTCTCTTAAGAAATCCACGT | + |
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Preference number: 6 (lower is better) Translates to: ILWSCGGSPCTQ*GHLHLLLRNPR Trigger: ACGTGGATTTCTTAAGAGAAGGTGAAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022616.14 |
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| CDS CAA 90 bp | TCCCTGGACGGCGTTCTGAATCTCCTTATTAATATACCTACTCCCTaGAGTGGACAGTTCTTGGAGCTCATTGTCAGAGACCTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLDGVLNLLINIPTP*SGQFLELIVRDLLL Trigger: GAGCAGGAGGTCTCTGACAATGAGCTCCAAGAACTGTCCACTCAAGGGAGTAGGTATATTAATAAGGAGATTCAGAACGCCGTCCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000144619.2 ENSMUST00000153460.8 |
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| CDS TCA 72 bp | TCCCTTTCTTCCCATAAGAGCCTGAGGCAGGGCAGATaGATTTCCTGTGTCTCCAGAGCATATTTAACATGC | + |
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Preference number: 6 (lower is better) Translates to: SLSSHKSLRQGR*ISCVSRAYLTC Trigger: GCATGTTAAATATGCTCTGGAGACACAGGAAATTCATCTGCCCTGCCTCAGGCTCTTATGGGAAGAAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144619.2 |
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| CDS CAA 72 bp | GGCGTTCTGAATCTCCTTATTAATATACCTACTCCCTaGAGTGGACAGTTCTTGGAGCTCATTGTCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: GVLNLLINIPTP*SGQFLELIVRD Trigger: GTCTCTGACAATGAGCTCCAAGAACTGTCCACTCAAGGGAGTAGGTATATTAATAAGGAGATTCAGAACGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022616.14 ENSMUST00000127387.8 ENSMUST00000128539.8 ENSMUST00000138191.8 ENSMUST00000144619.2 ENSMUST00000153460.8 |
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