Pregenerated sensors for CLTB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047547Ensembl transcript IDs: ENSMUST00000049575.8, ENSMUST00000091609.11, ENSMUST00000140142.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTCCTCTaGCCCAGCAAGGCCCATGTGCTTCGCGGCCGTTCTCGTGACGGG | + |
|
Preference number: 1 (lower is better) Translates to: QLPEEVPLWRKQLLL*PSKAHVLRGRSRDG Trigger: CCCGTCACGAGAACGGCCGCGAAGCACATGGGCCTTGCTGGGGCAGAGGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| 3UTR GCA 90 bp | AGCTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGTGTGGCAGCTaGCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTCCTCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: SSQRFRGTEQAVCGS*QRKFHSGGSSCSSA Trigger: GGCAGAGGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| 3UTR CCA 90 bp | GAGCAAGGTTGCAGACCCTGTCTCGTGAAAATTTGCCTTTCTTCTTaGAGGGCAGACAGCAGACACAGACAGGTTGGGGTTCCTGCTTCC | + |
|
Preference number: 1 (lower is better) Translates to: EQGCRPCLVKICLSS*RADSRHRQVGVPAS Trigger: GGAAGCAGGAACCCCAACCTGTCTGTGTCTGCTGTCTGCCCTCCAAGAAGAAAGGCAAATTTTCACGAGACAGGGTCTGCAACCTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CCA 90 bp | TATTTGCCACCCTTACTCAGGCCTAGACACAGCCTTAGAGCACGCTaGCCTCACTTCCTTTCTACACAAAAGCCAATTCTGTTTGGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: YLPPLLRPRHSLRAR*PHFLSTQKPILFGE Trigger: CTCCCCAAACAGAATTGGCTTTTGTGTAGAAAGGAAGTGAGGCCAGCGTGCTCTAAGGCTGTGTCTAGGCCTGAGTAAGGGTGGCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CCA 90 bp | AGCACGCTGGCCTCACTTCCTTTCTACACAAAAGCCAATTCTGTTTaGGGAGTCTTAGTTTTCTCAGCTATACATGAGGACAGCAGAGTC | + |
|
Preference number: 1 (lower is better) Translates to: STLASLPFYTKANSV*GVLVFSAIHEDSRV Trigger: GACTCTGCTGTCCTCATGTATAGCTGAGAAAACTAAGACTCCCCAAACAGAATTGGCTTTTGTGTAGAAAGGAAGTGAGGCCAGCGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR GCA 90 bp | TATCAGATCCCATTACAGATGGTTTTAAGTTTCCATGTAGTTAGTTaGTGGGCATTGATCTCAGAACCTCTGGAAGAGCAGCCAGTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: YQIPLQMVLSFHVVS*WALISEPLEEQPVL Trigger: GAGCACTGGCTGCTCTTCCAGAGGTTCTGAGATCAATGCCCAGCAACTAACTACATGGAAACTTAAAACCATCTGTAATGGGATCTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR CCA 90 bp | ACAGACAGGTTGGGGTTCCTGCTTCCAGCTGCGAGCTCTGGGTTTCTAAGACTAGGAGTCATGAGGGGCTaGGCCAGGGGACCAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TDRLGFLLPAASSGFLRLGVMRG*ARGPGR Trigger: CCTTCCTGGTCCCCTGGCCCAGCCCCTCATGACTCC...TAGTCTTAGAAACCCAGAGCTCGCAGCTGGAAGCAGGAACCCCAACCTGTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR CCA 90 bp | CATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGGGGCTGGAGAACAGGCTGTGTGTaGCAGCTGCCAGAGGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: HQEGQSQLSGLTGVMRGWRTGCV*QLPEEV Trigger: AACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCT...CCAGCCCCTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| 3UTR CAA 90 bp | GAGGCACATCTGTACTGCAGCAGGCCTGCATGTCTTAAGAGGGTCTaGGTCACTCTCGAGGAAGAAGGTTGGGCGGATGCTGTATTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: EAHLYCSRPACLKRV*VTLEEEGWADAVFA Trigger: GGCAAATACAGCATCCGCCCAACCTTCTTCCTCGAGAGTGACCAAGACCCTCTTAAGACATGCAGGCCTGCTGCAGTACAGATGTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR CCA 90 bp | ACATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGGGGCTGAGAACAGGCTGTGTGTaGCAGCTGCCAGAGGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TSGGTVTIEWADRSHEGLRTGCV*QLPEEV Trigger: AACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCT...CAGCCCCTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| 3UTR-3UTR GCA 90 bp | ACAGACAGGTTGGGGTTCCTGCTTCCAGCTGCGAGCTCTGGGTTTCTAAGACTAAGCGCTGACACCAGTTaGGGCTTCCAGAGAAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: TDRLGFLLPAASSGFLRLSADTS*GFQRNE Trigger: CTCATTTCTCTGGAAGCCGCAACTGGTGTCAGCGCT...TAGTCTTAGAAACCCAGAGCTCGCAGCTGGAAGCAGGAACCCCAACCTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAGAGGGAGGCACATCTGTACTGCAGCAGGCCTGCATGTCTTAAGAGGGTCAGAAGGTTGGGCGGATaGTGTATTTGCCACCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LKREAHLYCSRPACLKRVRRLGG*CICHPY Trigger: GTAAGGGTGGCAAATACAGCATCCGCCCAACCTTCT...GACCCTCTTAAGACATGCAGGCCTGCTGCAGTACAGATGTGCCTCCCTCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CAA 90 bp | AAATTTGCCTTTCTTCTTGGAGGGCAGACAGCAGACACAGACAGGTaGGGGTTCCTGCTTCCAGCTGCGAGCTCTGGGTTTCTAAGACTA | + |
|
Preference number: 2 (lower is better) Translates to: KFAFLLGGQTADTDR*GFLLPAASSGFLRL Trigger: TAGTCTTAGAAACCCAGAGCTCGCAGCTGGAAGCAGGAACCCCAACCTGTCTGTGTCTGCTGTCTGCCCTCCAAGAAGAAAGGCAAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR GCA 90 bp | ACACACGCATGCCAGAAGAGGGTATCAGATCCCATTACAGATGGTTTTAAGTTTTCTGGCGGAAGCAGCTaGTCCTCTGCCCCAGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: THACQKRVSDPITDGFKFSGGSS*SSAPAR Trigger: CCTTGCTGGGGCAGAGGAGCAGCTGCTTCCGCCAGA...AAACTTAAAACCATCTGTAATGGGATCTGATACCCTCTTCTGGCATGCGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR CCA 90 bp | CACATCTGTACTGCAGCAGGCCTGCATGTCTTAAGAGGGTCTTGGTCACTCTCGACAGTCACAATTGAGTaGGCTGACAGGAGTCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: HICTAAGLHVLRGSWSLSTVTIE*ADRSHE Trigger: CTCATGACTCCTGTCAGCCCACTCAATTGTGACTGT...CGAGAGTGACCAAGACCCTCTTAAGACATGCAGGCCTGCTGCAGTACAGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTCACTTCCTTTCTACACAAAAGCCAATTCTGTTTGGGGAGTCTTAGTTTTGCTGTGTGTGGCAGCTaGCAGAGGAAGTTCCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: GLTSFLHKSQFCLGSLSFAVCGS*QRKFHS Trigger: AGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGC...AAAACTAAGACTCCCCAAACAGAATTGGCTTTTGTGTAGAAAGGAAGTGAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CAA 90 bp | TTTTCTCAGCTATACATGAGGACAGCAGAGTCCCTACCTTCAGACTaGTTAAAGAATCACAGAGAGCAAGGTTGCAGACCCTGTCTCGTG | + |
|
Preference number: 2 (lower is better) Translates to: FSQLYMRTAESLPSD*LKNHREQGCRPCLV Trigger: CACGAGACAGGGTCTGCAACCTTGCTCTCTGTGATTCTTTAACAAGTCTGAAGGTAGGGACTCTGCTGTCCTCATGTATAGCTGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CAA 90 bp | CCATTACAGATGGTTTTAAGTTTCCATGTAGTTAGTTGCTGGGCATaGATCTCAGAACCTCTGGAAGAGCAGCCAGTGCTCTTAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: PLQMVLSFHVVSCWA*ISEPLEEQPVLLTT Trigger: AGTGGTTAAGAGCACTGGCTGCTCTTCCAGAGGTTCTGAGATCAATGCCCAGCAACTAACTACATGGAAACTTAAAACCATCTGTAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CAA 90 bp | GAATTGAGACAACAGATTTCTGATGCTCTAAGGCAGCCAGGTTTTTaGGTATTCTTTAATGGCAATCTTAGGGAACTAATACTGTTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: ELRQQISDALRQPGF*VFFNGNLRELILLA Trigger: TGCTAACAGTATTAGTTCCCTAAGATTGCCATTAAAGAATACCAAAAAACCTGGCTGCCTTAGAGCATCAGAAATCTGTTGTCTCAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR GCA 72 bp | AGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTaGTCCTCTGCCCCAGCAAGGCCCATGTGCTTCGCG | + |
|
Preference number: 3 (lower is better) Translates to: SCQRKFHSGGSS*SSAPARPMCFA Trigger: CGCGAAGCACATGGGCCTTGCTGGGGCAGAGGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| 3UTR GCA 72 bp | AGATTCAGAGGAACAGAACAGGCTGTGTGTGGCAGCTaGCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RFRGTEQAVCGS*QRKFHSGGSSC Trigger: GCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTCTGAATCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| 3UTR CCA 72 bp | CTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGTGTaGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPEIQRNRTGCV*QLPEEVPLWRK Trigger: CTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| 3UTR CCA 72 bp | TTCTTCTTGGAGGGCAGACAGCAGACACAGACAGGTTaGGGTTCCTGCTTCCAGCTGCGAGCTCTGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FFLEGRQQTQTG*GSCFQLRALGF Trigger: GAAACCCAGAGCTCGCAGCTGGAAGCAGGAACCCCAACCTGTCTGTGTCTGCTGTCTGCCCTCCAAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR CAA 90 bp | CGTAATGGCTTAAAGTCCTGTTATACGGCCTCTGCTGAAGGGGAAGAAGGTGTGGCAGACACAGACAGGTaGGGGTTCCTGCTTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RNGLKSCYTASAEGEEGVADTDR*GFLLPA Trigger: AGCTGGAAGCAGGAACCCCAACCTGTCTGTGTCTGC...CACACCTTCTTCCCCTTCAGCAGAGGCCGTATAACAGGACTTTAAGCCATTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR GCA 72 bp | CCCACTCCCCTCTCTCTCTCTGCATGTACACACGCATaGCAGAAGAGGGTATCAGATCCCATTACAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: PTPLSLSACTHA*QKRVSDPITDG Trigger: ACCATCTGTAATGGGATCTGATACCCTCTTCTGGCATGCGTGTGTACATGCAGAGAGAGAGAGGGGAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CCA 72 bp | CCCTTACTCAGGCCTAGACACAGCCTTAGAGCACGCTaGCCTCACTTCCTTTCTACACAAAAGCCAATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLLRPRHSLRAR*PHFLSTQKPIL Trigger: CAGAATTGGCTTTTGTGTAGAAAGGAAGTGAGGCCAGCGTGCTCTAAGGCTGTGTCTAGGCCTGAGTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR GCA 72 bp | AGAGAGCAAGGTTGCAGACCCTGTCTCGTGAAAATTTaGCTTTCTTCTTGGAGGGCAGACAGCAGACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: REQGCRPCLVKI*LSSWRADSRHR Trigger: TCTGTGTCTGCTGTCTGCCCTCCAAGAAGAAAGGCAAATTTTCACGAGACAGGGTCTGCAACCTTGCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTCACTTCCTTTCTACACAAAAGCCAATTCTGTTTGGGGAGTCTTAGTTTTGGGACCAGGAAGGAGTaGTGGGGTGAAAGGGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLTSFLHKSQFCLGSLSFGTRKE*WGERGK Trigger: CTTACCCCTTTCACCCCACAACTCCTTCCTGGTCCC...AAAACTAAGACTCCCCAAACAGAATTGGCTTTTGTGTAGAAAGGAAGTGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR-3UTR CAA 90 bp | CATGTACACACGCATGCCAGAAGAGGGTATCAGATCCCATTACAGATGGTTTTAGTTAGTTGCTGGGCATaGATCTCAGAACCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HVHTHARRGYQIPLQMVLVSCWA*ISEPLE Trigger: TTCCAGAGGTTCTGAGATCAATGCCCAGCAACTAAC...TAAAACCATCTGTAATGGGATCTGATACCCTCTTCTGGCATGCGTGTGTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR GCA 72 bp | CCTTCAGACTTGTTAAAGAATCACAGAGAGCAAGGTTaGAGACCCTGTCTCGTGAAAATTTGCCTTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSDLLKNHREQG*RPCLVKICLSS Trigger: AGAAGAAAGGCAAATTTTCACGAGACAGGGTCTGCAACCTTGCTCTCTGTGATTCTTTAACAAGTCTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR GCA 72 bp | CCATTACAGATGGTTTTAAGTTTCCATGTAGTTAGTTaGTGGGCATTGATCTCAGAACCTCTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLQMVLSFHVVS*WALISEPLEEQ Trigger: CTGCTCTTCCAGAGGTTCTGAGATCAATGCCCAGCAACTAACTACATGGAAACTTAAAACCATCTGTAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CCA 72 bp | GCCTCACTTCCTTTCTACACAAAAGCCAATTCTGTTTaGGGAGTCTTAGTTTTCTCAGCTATACATGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ASLPFYTKANSV*GVLVFSAIHED Trigger: GTCCTCATGTATAGCTGAGAAAACTAAGACTCCCCAAACAGAATTGGCTTTTGTGTAGAAAGGAAGTGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CCA 72 bp | TTACAGATGGTTTTAAGTTTCCATGTAGTTAGTTGCTaGGCATTGATCTCAGAACCTCTGGAAGAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LQMVLSFHVVSC*ALISEPLEEQP Trigger: TGGCTGCTCTTCCAGAGGTTCTGAGATCAATGCCCAGCAACTAACTACATGGAAACTTAAAACCATCTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAGTTGTGGGGTGAAAGGGGTAAGGGTCCCACTTCCTAGCTCCCAGAGACAGGAAGGCGGCCGCTaGGTCCTCCTCGGCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRSCGVKGVRVPLPSSQRQEGGR*VLLGGL Trigger: GAGGCCGCCGAGGAGGACCCAGCGGCCGCCTTCCTG...TCTCTGGGAGCTAGGAAGTGGGACCCTTACCCCTTTCACCCCACAACTCCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTCCTCTGCCCCAGATCTCGCTTTCCTGCTaGGCCAGGAAGGCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAARGSSTLAEAAAPLPQISLSC*ARKAAA Trigger: AGCGGCCGCCTTCCTGGCCCAGCAGGAAAGCGAGAT...CTGGGGCAGAGGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGCTCGCGAGTCCCGGCTaGGCAGAGGCCACCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSQRFRGTEQAVCGSCQRLASPG*AEATWL Trigger: CAGCCAGGTGGCCTCTGCGCAGCCGGGACTCGCGAG...CCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | GAGGAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGCAGAGGCCACCTGGCTaGCGGCAGGTGCCCCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EEQNRLCVAAARGSSTLAQRPPG*RQVPRN Trigger: GTTTCGGGGCACCTGCCGCCAGCCAGGTGGCCTCTG...CGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR GCA 90 bp | GAGGAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGCAATCTCGCTTTCCTaGTGGGCCAGGAAGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEQNRLCVAAARGSSTLAAISLS*WARKAA Trigger: GGCCGCCTTCCTGGCCCAGCAGGAAAGCGAGATTGC...CGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR GCA 90 bp | AGATTCAGAGGAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACCTCGCGAGTCCCGGCTaGGCAGAGGCCACCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFRGTEQAVCGSCQRKFHLASPG*AEATWL Trigger: CAGCCAGGTGGCCTCTGCGCAGCCGGGACTCGCGAG...GTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTCTGAATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTCCCGGGACAGTGGTGTTTaGTTCAGGGACATGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: AVCGSCQRKFHSGGSSCSRDSGV*FRDMST Trigger: GGTGCTCATGTCCCTGAAGCAAACACCACTGTCCCG...GGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | GGACCAGGAAGGAGTTGTGGGGTGAAAGGGGTAAGGGTCCCACTTCCTAGCTCCCCTCCAGGTCTTTCTTaGCCTTCTCCCGCCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPGRSCGVKGVRVPLPSSPPGLS*PSPATP Trigger: AGGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGG...GGAGCTAGGAAGTGGGACCCTTACCCCTTTCACCCCACAACTCCTTCCTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS-3UTR TCA 90 bp | CACATCTGTACTGCAGCAGGCCTGCATGTCTTAAGAGGGTCTTGGTCACTCTCGTTTGCTTCAGGGACATaGGCACCGAGCGCAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HICTAAGLHVLRGSWSLSFASGT*APSAGG Trigger: CCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAAA...CGAGAGTGACCAAGACCCTCTTAAGACATGCAGGCCTGCTGCAGTACAGATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR GCA 90 bp | GTAAGGGTCCCACTTCCTAGCTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGGCAATCTCGCTTTCCTaGTGGGCCAGGAAGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRVPLPSSQRFRGTEQAVAISLS*WARKAA Trigger: GGCCGCCTTCCTGGCCCAGCAGGAAAGCGAGATTGC...CACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAGCTAGGAAGTGGGACCCTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | ATACATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGGGGCATCTCGCTTTCCTGCTaGGCCAGGAAGGCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHQEGQSQLSGLTGVMRGISLSC*ARKAAA Trigger: AGCGGCCGCCTTCCTGGCCCAGCAGGAAAGCGAGAT...GCCCCTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR TCA 90 bp | CACATCTGTACTGCAGCAGGCCTGCATGTCTTAAGAGGGTCTTGGTCACTCTCGCCCGCTCTCCGACGATaGGAAGAAGCCGAAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HICTAAGLHVLRGSWSLSPALRR*EEAEVL Trigger: GAGGACTTCGGCTTCTTCTCATCGTCGGAGAGCGGG...CGAGAGTGACCAAGACCCTCTTAAGACATGCAGGCCTGCTGCAGTACAGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR TCA 90 bp | GGACCAGGAAGGAGTTGTGGGGTGAAAGGGGTAAGGGTCCCACTTCCTAGCTCCGGCCCGTTAGCCTCCTaGAACACATCTCCATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GPGRSCGVKGVRVPLPSSGPLAS*NTSPLT Trigger: AGTCAATGGAGATGTGTTTCAGGAGGCTAACGGGCC...GGAGCTAGGAAGTGGGACCCTTACCCCTTTCACCCCACAACTCCTTCCTGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR GCA 90 bp | GGAAGGAGTTGTGGGGTGAAAGGGGTAAGGGTCCCACTTCCTAGCTCCCAGAGAGCTGTGTGTGGCAGCTaGCAGAGGAAGTTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRSCGVKGVRVPLPSSQRAVCGS*QRKFHS Trigger: AGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGC...TCTCTGGGAGCTAGGAAGTGGGACCCTTACCCCTTTCACCCCACAACTCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS-3UTR CCA 90 bp | GGACCAGGAAGGAGTTGTGGGGTGAAAGGGGTAAGGGTCCCACTTCCTAGCTCCTCAACCTGTTCACTTTaGCGCTGGTTCCACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRSCGVKGVRVPLPSSSTCSL*RWFHSS Trigger: GGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGA...GGAGCTAGGAAGTGGGACCCTTACCCCTTTCACCCCACAACTCCTTCCTGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS-3UTR TCA 90 bp | GAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAATGCTGCTCTTGGGATTaGAGTCACACAGCTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EQNRLCVAAARGSSTLAECCSWD*SHTAGL Trigger: TAGCCCAGCTGTGTGACTTCAATCCCAAGAGCAGCA...TTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR GCA 90 bp | CTGAAGAGGGAGGCACATCTGTACTGCAGCAGGCCTGCATGTCTTAAGAGGGTCCGGGACAGTGGTGTTTaGTTCAGGGACATGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LKREAHLYCSRPACLKRVRDSGV*FRDMST Trigger: GGTGCTCATGTCCCTGAAGCAAACACCACTGTCCCG...GACCCTCTTAAGACATGCAGGCCTGCTGCAGTACAGATGTGCCTCCCTCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | GGCCTCACTTCCTTTCTACACAAAAGCCAATTCTGTTTGGGGAGTCTTAGTTTTCAGGAAGGCGGCCGCTaGGTCCTCCTCGGCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLTSFLHKSQFCLGSLSFQEGGR*VLLGGL Trigger: GAGGCCGCCGAGGAGGACCCAGCGGCCGCCTTCCTG...AAAACTAAGACTCCCCAAACAGAATTGGCTTTTGTGTAGAAAGGAAGTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGTCCCACTTCCTAGCTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGCCTCCAGGTCTTTCTTaGCCTTCTCCCGCCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVPLPSSQRFRGTEQAVPPGLS*PSPATP Trigger: AGGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGG...CACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAGCTAGGAAGTGGGACCCTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTATGCCACATAGCCAATaGTATCAGCATCTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLCVAAARGSSTLAEAAAMPHSQ*YQHLAA Trigger: AGCAGCCAGATGCTGATACCATTGGCTATGTGGCAT...AGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR CCA 90 bp | GGACCAGGAAGGAGTTGTGGGGTGAAAGGGGTAAGGGTCCCACTTCCTAGCTCCCACCTAGCGGGACAGTaGTGTTTGCTGTTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRSCGVKGVRVPLPSSHLAGQ*CLLLLI Trigger: GATCAACAACAGCAAACACCACTGTCCCGCTAGGTG...GGAGCTAGGAAGTGGGACCCTTACCCCTTTCACCCCACAACTCCTTCCTGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| 3UTR CAA 72 bp | CTGTACTGCAGCAGGCCTGCATGTCTTAAGAGGGTCTaGGTCACTCTCGAGGAAGAAGGTTGGGCGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYCSRPACLKRV*VTLEEEGWADA Trigger: AGCATCCGCCCAACCTTCTTCCTCGAGAGTGACCAAGACCCTCTTAAGACATGCAGGCCTGCTGCAGTACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | CTGAAGAGGGAGGCACATCTGTACTGCAGCAGGCCTGCATGTCTTAAGAGGGTCTGTTCACTTTGGCGCTaGTTCCACTCCTCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKREAHLYCSRPACLKRVCSLWR*FHSSRS Trigger: AGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACA...GACCCTCTTAAGACATGCAGGCCTGCTGCAGTACAGATGTGCCTCCCTCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | CTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTCCTAATGGTATCAGCATCTaGCTGCTGGTAGAACGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCVAAARGSSTLAEAAAPNGISI*LLVERF Trigger: AAAGCGTTCTACCAGCAGCCAGATGCTGATACCATT...AGGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAGTTGTGGGGTGAAAGGGGTAAGGGTCCCACTTCCTAGCTCCCAGAGATTGAAGTCACACAGCTaGGCTACCTTCTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRSCGVKGVRVPLPSSQRLKSHS*ATFSHS Trigger: AGAGTGGGAGAAGGTAGCCCAGCTGTGTGACTTCAA...TCTCTGGGAGCTAGGAAGTGGGACCCTTACCCCTTTCACCCCACAACTCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | GAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAATTGAAGTCACACAGCTaGGCTACCTTCTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQNRLCVAAARGSSTLAELKSHS*ATFSHS Trigger: AGAGTGGGAGAAGGTAGCCCAGCTGTGTGACTTCAA...TTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR TCA 90 bp | TCCCACTTCCTAGCTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGTGTGGCATGCTGCTCTTGGGATTaGAGTCACACAGCTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SHFLAPRDSEEQNRLCVACCSWD*SHTAGL Trigger: TAGCCCAGCTGTGTGACTTCAATCCCAAGAGCAGCA...TGCCACACACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAGCTAGGAAGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR GCA 90 bp | GTAAGGGTCCCACTTCCTAGCTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGGCAGCGTCTAACTCCTaGAGCCTTTTCTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRVPLPSSQRFRGTEQAVAASNS*SLFFCS Trigger: GGAGCAGAAGAAAAGGCTGCAGGAGTTAGACGCTGC...CACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAGCTAGGAAGTGGGACCCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | AGATTCAGAGGAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCAACCTGTTCACTTTaGCGCTGGTTCCACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFRGTEQAVCGSCQRKFHSTCSL*RWFHSS Trigger: GGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGA...GTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTCTGAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | ACATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGGGGCTGCCGGGGTCTCCTCCTTaGATTCTTTCACAAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSGGTVTIEWADRSHEGLPGSPP*ILSQKP Trigger: AGGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGG...CAGCCCCTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | ATACATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGGGGCAGAACAGGCTGTGTGTaGCAGCTGCCAGAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IHQEGQSQLSGLTGVMRGRTGCV*QLPEEV Trigger: AACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCT...GCCCCTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS-3UTR TCA 90 bp | GTAAAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCGCGGCCGTTCTCGTaGCGGGCACCTAGCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VKRVNTPFKPRKIHQEGQSRPFS*RAPSGT Trigger: TGTCCCGCTAGGTGCCCGTCACGAGAACGGCCGCGA...CTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| 3UTR CAA 72 bp | CAGAGAGCAAGGTTGCAGACCCTGTCTCGTGAAAATTaGCCTTTCTTCTTGGAGGGCAGACAGCAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: QRARLQTLSREN*PFFLEGRQQTQ Trigger: CTGTGTCTGCTGTCTGCCCTCCAAGAAGAAAGGCAAATTTTCACGAGACAGGGTCTGCAACCTTGCTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR TCA 90 bp | AGATTCAGAGGAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACCAGCGATCCTGTTGTTaGTCTTGTTCTTCTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RFRGTEQAVCGSCQRKFHQRSCC*SCSSQP Trigger: AGGTTGAGAAGAACAAGATCAACAACAGGATCGCTG...GTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTCTGAATCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCACCCCGCTCTCCGACGATaGGAAGAAGCCGAAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KELTHPLSQEKYIRRDSHPALRR*EEAEVL Trigger: GAGGACTTCGGCTTCTTCTCATCGTCGGAGAGCGGG...GTGACTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR TCA 90 bp | AAAAATACATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGGGCCCGTTAGCCTCCTaGAACACATCTCCATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KNTSGGTVTIEWADRSHEGPLAS*NTSPLT Trigger: AGTCAATGGAGATGTGTTTCAGGAGGCTAACGGGCC...CTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATGTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCATTTGCTTCAGGGACATaGGCACCGAGCGCAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRVNTPFKPRKIHQEGQSFASGT*APSAGG Trigger: CCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAAA...TGACTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR TCA 90 bp | ATACATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGGGGCGGTGTTTGCTGTTGTTaGTCTTGTTCTTCTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: IHQEGQSQLSGLTGVMRGGVCCC*SCSSQP Trigger: AGGTTGAGAAGAACAAGATCAACAACAGCAAACACC...GCCCCTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCATCTGGCGGAAGCAGCTaGTCCTCTGCCCCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRVNTPFKPRKIHQEGQSSGGSS*SSAPAR Trigger: CCTTGCTGGGGCAGAGGAGCAGCTGCTTCCGCCAGA...TGACTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCAGAGTCCCTACCTTCAGACTTGTTAAAGAATCACAGAGAGCAAGGTTGTCAACCTGTTCACTTTaGCGCTGGTTCCACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSRVPTFRLVKESQRARLSTCSL*RWFHSS Trigger: GGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGA...CAACCTTGCTCTCTGTGATTCTTTAACAAGTCTGAAGGTAGGGACTCTGCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | GTAAAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGCCTCCAGGTCTTTCTTaGCCTTCTCCCGCCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKRVNTPFKPRKIHQEGQPPGLS*PSPATP Trigger: AGGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGG...CTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| 3UTR CAA 72 bp | CTATACATGAGGACAGCAGAGTCCCTACCTTCAGACTaGTTAAAGAATCACAGAGAGCAAGGTTGCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LYMRTAESLPSD*LKNHREQGCRP Trigger: GGGTCTGCAACCTTGCTCTCTGTGATTCTTTAACAAGTCTGAAGGTAGGGACTCTGCTGTCCTCATGTATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCACTGTTCACTTTGGCGCTaGTTCCACTCCTCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KELTHPLSQEKYIRRDSHCSLWR*FHSSRS Trigger: AGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACA...GTGACTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCATGTTCACTTTGGCGCTaGTTCCACTCCTCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVNTPFKPRKIHQEGQSCSLWR*FHSSRS Trigger: AGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACA...TGACTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGCCGGGGTCTCCTCCTTaGATTCTTTCACAAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKRVNTPFKPRKIHQEGQPGSPP*ILSQKP Trigger: AGGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGG...CTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| 3UTR CAA 72 bp | ACCTTCAGACTTGTTAAAGAATCACAGAGAGCAAGGTaGCAGACCCTGTCTCGTGAAAATTTGCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFRLVKESQRAR*QTLSRENLPFF Trigger: GAAGAAAGGCAAATTTTCACGAGACAGGGTCTGCAACCTTGCTCTCTGTGATTCTTTAACAAGTCTGAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| 3UTR CAA 72 bp | CAACAGATTTCTGATGCTCTAAGGCAGCCAGGTTTTTaGGTATTCTTTAATGGCAATCTTAGGGAACTAATA | + |
|
Preference number: 4 (lower is better) Translates to: QQISDALRQPGF*VFFNGNLRELI Trigger: TATTAGTTCCCTAAGATTGCCATTAAAGAATACCAAAAAACCTGGCTGCCTTAGAGCATCAGAAATCTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CCA 90 bp | TCTGAACCAGCCCCGCTCGCGAGTCCCGGCTGCGCAGAGGCCACCTaGCTGGCGGCAGGTGCCCCGAAACCCGGGTCATTCTCGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEPAPLASPGCAEAT*LAAGAPKPGSFSMP Trigger: TGGCATCGAGAATGACCCGGGTTTCGGGGCACCTGCCGCCAGCCAGGTGGCCTCTGCGCAGCCGGGACTCGCGAGCGGGGCTGGTTCAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS TCA 90 bp | GCTCCTCTGCCCCAGCAAGGCCCATGTGCTTCGCGGCCGTTCTCGTaGCGGGCACCTAGCGGGACAGTGGTGTTTGCTGTTGTTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: APLPQQGPCASRPFS*RAPSGTVVFAVVDL Trigger: AAGATCAACAACAGCAAACACCACTGTCCCGCTAGGTGCCCGTCACGAGAACGGCCGCGAAGCACATGGGCCTTGCTGGGGCAGAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTCCTCTGCCCCAGCTCAACCTGTTCACTTaGGCGCTGGTTCCACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAARGSSTLAEAAAPLPQLNLFT*ALVPLL Trigger: GAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAG...CTGGGGCAGAGGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS TCA 90 bp | AGCCTCCTGAAACACATCTCCATTGACTGTAGTACTCATGTCCTCTaGACCAGCCCCGCTCGCGAGTCCCGGCTGCGCAGAGGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLKHISIDCSTHVL*TSPARESRLRRGHL Trigger: CAGGTGGCCTCTGCGCAGCCGGGACTCGCGAGCGGGGCTGGTTCAGAGGACATGAGTACTACAGTCAATGGAGATGTGTTTCAGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGGCGGGACAGTGGTGTTaGCTTCAGGGACATGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGCVWQLPEEVPLWRKQLAGQWC*LQGHEH Trigger: GTGCTCATGTCCCTGAAGCAAACACCACTGTCCCGC...CAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS CCA 90 bp | CAACCTGTTCACTTTGGCGCTGGTTCCACTCCTCCAGGTCTTTCTTaGCCTTCTCCCGCCACTCCTGTTCGGTCACCTTCGAGGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QPVHFGAGSTPPGLS*PSPATPVRSPSRQR Trigger: ACGCTGCCTCGAAGGTGACCGAACAGGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTCCTCTCAACCTGTTCACTTaGGCGCTGGTTCCACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCVAAARGSSTLAEAAAPLNLFT*ALVPLL Trigger: GAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAG...AGGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTCCTCCCGGGGTCTCCTCCTaGGATTCTTTCACAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCVAAARGSSTLAEAAAPPGVSS*DSFTKA Trigger: GGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGGG...AGGAGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTTTGCTGCTCTTGGGATaGAAGTCACACAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLCVAAARGSSTLAEAAALLLLG*KSHSWA Trigger: AGCCCAGCTGTGTGACTTCAATCCCAAGAGCAGCAA...AGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS CCA 90 bp | ACAGCTGGGCTACCTTCTCCCACTCTGTGCCCGGGGTCTCCTCCTTaGATTCTTTCACAAAAGCCTCTTCCGATGCCACATAGCCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: TAGLPSPTLCPGSPP*ILSQKPLPMPHSQW Trigger: CCATTGGCTATGTGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGGGCACAGAGTGGGAGAAGGTAGCCCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR CAA 90 bp | TCCCACTTCCTAGCTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGTGTGGCAGCGGGACAGTGGTGTTaGCTTCAGGGACATGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SHFLAPRDSEEQNRLCVAAGQWC*LQGHEH Trigger: GTGCTCATGTCCCTGAAGCAAACACCACTGTCCCGC...TGCCACACACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAGCTAGGAAGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS CCA 90 bp | GCCCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTTGGCGCTaGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLILFFSTCSLWR*FHSSRSFLAFSRHS Trigger: GGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGTCTTCCGATGCCCTGTaGTTGATCTTGTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGCVWQLPEEVPLWRKQLSSDAL*LILFFS Trigger: TGAGAAGAACAAGATCAACAACAGGGCATCGGAAGA...CAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CCA 90 bp | TCCGATGCCCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTTaGCGCTGGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SDALLLILFFSTCSL*RWFHSSRSFLAFSR Trigger: GCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGGCATCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CCA 90 bp | CATGTGCTTCGCGGCCGTTCTCGTGACGGGCACCTAGCGGGACAGTaGTGTTTGCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: HVLRGRSRDGHLAGQ*CLLLLILFFSTCSL Trigger: AAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGCAAACACCACTGTCCCGCTAGGTGCCCGTCACGAGAACGGCCGCGAAGCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGTCCCACTTCCTAGCTCCCAGAGATTCAGAGGAACAGAACAGGCTGTGTTGCTGCTCTTGGGATaGAAGTCACACAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRVPLPSSQRFRGTEQAVLLLLG*KSHSWA Trigger: AGCCCAGCTGTGTGACTTCAATCCCAAGAGCAGCAA...CACAGCCTGTTCTGTTCCTCTGAATCTCTGGGAGCTAGGAAGTGGGACCCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | GAGGAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGACATCTTTACACTGCTaGCTGCTCTTGGGATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EEQNRLCVAAARGSSTLATSLHC*LLLGLK Trigger: CTTCAATCCCAAGAGCAGCAAGCAGTGTAAAGATGT...CGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | ACATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGGGGCTGGCGGGACAGTGGTGTTaGCTGTTGTTGATCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSGGTVTIEWADRSHEGLAGQWC*LLLILF Trigger: GAACAAGATCAACAACAGCAAACACCACTGTCCCGC...CAGCCCCTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS CCA 90 bp | ATCCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTTGGCGCTaGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLILFFSTCSLWR*FHSSRSFLAFSRHS Trigger: GGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS CCA 90 bp | TCAGCGATCCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTTaGCGCTGGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAILLLILFFSTCSL*RWFHSSRSFLAFSR Trigger: GCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGATCGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS CCA 90 bp | TTGCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTTGGCGCTaGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLILFFSTCSLWR*FHSSRSFLAFSRHS Trigger: GGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATACATCAGGAGGGACAGTCACAATTGAGTGGGCTGACAGGAGTCATGAGTCCTCCAGGTCTTTCTaGGCCTTCTCCCGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KNTSGGTVTIEWADRSHESSRSF*AFSRHS Trigger: GGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGA...CTCATGACTCCTGTCAGCCCACTCAATTGTGACTGTCCCTCCTGATGTATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAGCAGCTGCTATCCTGTTGTTGATCTaGTTCTTCTCAACCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLCVAAARGSSTLAEAAAILLLI*FFSTCS Trigger: TGAACAGGTTGAGAAGAACAAGATCAACAACAGGAT...AGCAGCTGCTTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR CAA 90 bp | GAACAGAACAGGCTGTGTGTGGCAGCTGCCAGAGGAAGTTCCACTCTGGCGGAAACATCTTTACACTGCTaGCTGCTCTTGGGATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQNRLCVAAARGSSTLAETSLHC*LLLGLK Trigger: CTTCAATCCCAAGAGCAGCAAGCAGTGTAAAGATGT...TTCCGCCAGAGTGGAACTTCCTCTGGCAGCTGCCACACACAGCCTGTTCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS CCA 90 bp | TGGTGTTTGCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTTaGCGCTGGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WCLLLLILFFSTCSL*RWFHSSRSFLAFSR Trigger: GCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGCAAACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACAGGTTGGGGTTCCTGCTTCCAGCTGCGAGCTCTGGGTTTCTAAGACTATCCGATGCCCTGTTGTaGATCTTGTTCTTCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TDRLGFLLPAASSGFLRLSDALL*ILFFST Trigger: GGTTGAGAAGAACAAGATCAACAACAGGGCATCGGA...TAGTCTTAGAAACCCAGAGCTCGCAGCTGGAAGCAGGAACCCCAACCTGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | GGAAGGAGTTGTGGGGTGAAAGGGGTAAGGGTCCCACTTCCTAGCTCCCAGAGATGGTGTTTGCTGTTGTaGATCTTGTTCTTCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: GRSCGVKGVRVPLPSSQRWCLLL*ILFFST Trigger: GGTTGAGAAGAACAAGATCAACAACAGCAAACACCA...TCTCTGGGAGCTAGGAAGTGGGACCCTTACCCCTTTCACCCCACAACTCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS CCA 90 bp | CCTTGGATTCTTTCACAAAAGCCTCTTCCGATGCCACATAGCCAATaGTATCAGCATCTGGCTGCTGGTAGAACGCTTTGTCAGCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: PWILSQKPLPMPHSQ*YQHLAAGRTLCQRS Trigger: GGATCGCTGACAAAGCGTTCTACCAGCAGCCAGATGCTGATACCATTGGCTATGTGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGCTATACATGAGGACAGCAGAGTCCCTACCTTCAGACTTGTTAAAGAATCCTCCAGGTCTTTCTaGGCCTTCTCCCGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSAIHEDSRVPTFRLVKESSRSF*AFSRHS Trigger: GGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGA...TTCTTTAACAAGTCTGAAGGTAGGGACTCTGCTGTCCTCATGTATAGCTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CCA 90 bp | CACAAAAGCCTCTTCCGATGCCACATAGCCAATGGTATCAGCATCTaGCTGCTGGTAGAACGCTTTGTCAGCGATCCTGTTGTTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: HKSLFRCHIANGISI*LLVERFVSDPVVDL Trigger: AAGATCAACAACAGGATCGCTGACAAAGCGTTCTACCAGCAGCCAGATGCTGATACCATTGGCTATGTGGCATCGGAAGAGGCTTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCCTCCAGGTCTTTCTaGGCCTTCTCCCGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKRVNTPFKPRKIHQEGQSSRSF*AFSRHS Trigger: GGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGA...CTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCACCCGGGGTCTCCTCCTaGGATTCTTTCACAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRVNTPFKPRKIHQEGQSPGVSS*DSFTKA Trigger: GGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGGG...TGACTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGCTATACATGAGGACAGCAGAGTCCCTACCTTCAGACTTGTTAAAGAAGCCCTGTTGTTGATCTaGTTCTTCTCAACCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSAIHEDSRVPTFRLVKEALLLI*FFSTCS Trigger: TGAACAGGTTGAGAAGAACAAGATCAACAACAGGGC...TTCTTTAACAAGTCTGAAGGTAGGGACTCTGCTGTCCTCATGTATAGCTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCACTCAGCGATCCTGTTGTaGATCTTGTTCTTCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: KELTHPLSQEKYIRRDSHSAILL*ILFFST Trigger: GGTTGAGAAGAACAAGATCAACAACAGGATCGCTGA...GTGACTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTTGTCAGCGATCCTGTaGTTGATCTTGTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VKRVNTPFKPRKIHQEGQLSAIL*LILFFS Trigger: TGAGAAGAACAAGATCAACAACAGGATCGCTGACAA...CTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTTAACACACCCTTTAAGCCAAGAAAAATACATCAGGAGGGACAGTCACTTGCTGTTGTTGATCTaGTTCTTCTCAACCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KELTHPLSQEKYIRRDSHLLLLI*FFSTCS Trigger: TGAACAGGTTGAGAAGAACAAGATCAACAACAGCAA...GTGACTGTCCCTCCTGATGTATTTTTCTTGGCTTAAAGGGTGTGTTAACTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS CCA 72 bp | GCCCCGCTCGCGAGTCCCGGCTGCGCAGAGGCCACCTaGCTGGCGGCAGGTGCCCCGAAACCCGGGTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: APLASPGCAEAT*LAAGAPKPGSF Trigger: GAATGACCCGGGTTTCGGGGCACCTGCCGCCAGCCAGGTGGCCTCTGCGCAGCCGGGACTCGCGAGCGGGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS GCA 72 bp | TCCCGGCTGCGCAGAGGCCACCTGGCTGGCGGCAGGTaGCCCGAAACCCGGGTCATTCTCGATGCCAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRLRRGHLAGGR*PETRVILDASN Trigger: ATTGCTGGCATCGAGAATGACCCGGGTTTCGGGGCACCTGCCGCCAGCCAGGTGGCCTCTGCGCAGCCGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS TCA 72 bp | CCCCAGCAAGGCCCATGTGCTTCGCGGCCGTTCTCGTaGCGGGCACCTAGCGGGACAGTGGTGTTTGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PQQGPCASRPFS*RAPSGTVVFAV Trigger: AACAGCAAACACCACTGTCCCGCTAGGTGCCCGTCACGAGAACGGCCGCGAAGCACATGGGCCTTGCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS CAA 90 bp | TCAACCTGTTCACTTTGGCGCTGGTTCCACTCCTCCAGGTCTTTCTaGGCCTTCTCCCGCCACTCCTGTTCGGTCACCTTCGAGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: STCSLWRWFHSSRSF*AFSRHSCSVTFEAA Trigger: CGCTGCCTCGAAGGTGACCGAACAGGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS CAA 72 bp | TCACTTTGGCGCTGGTTCCACTCCTCCAGGTCTTTCTaGGCCTTCTCCCGCCACTCCTGTTCGGTCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLWRWFHSSRSF*AFSRHSCSVTF Trigger: GAAGGTGACCGAACAGGAGTGGCGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS TCA 72 bp | AAACACATCTCCATTGACTGTAGTACTCATGTCCTCTaGACCAGCCCCGCTCGCGAGTCCCGGCTGCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KHISIDCSTHVL*TSPARESRLRR Trigger: TCTGCGCAGCCGGGACTCGCGAGCGGGGCTGGTTCAGAGGACATGAGTACTACAGTCAATGGAGATGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS CAA 72 bp | GCTACCTTCTCCCACTCTGTGCCCGGGGTCTCCTCCTaGGATTCTTTCACAAAAGCCTCTTCCGATGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATFSHSVPGVSS*DSFTKASSDAL Trigger: CAGGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGGGCACAGAGTGGGAGAAGGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CAA 90 bp | CACAGCTGGGCTACCTTCTCCCACTCTGTGCCCGGGGTCTCCTCCTaGGATTCTTTCACAAAAGCCTCTTCCGATGCCCTGTTGTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: HSWATFSHSVPGVSS*DSFTKASSDALLLI Trigger: GATCAACAACAGGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGGGCACAGAGTGGGAGAAGGTAGCCCAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CCA 72 bp | CTACCTTCTCCCACTCTGTGCCCGGGGTCTCCTCCTTaGATTCTTTCACAAAAGCCTCTTCCGATGCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPSPTLCPGSPP*ILSQKPLPMPC Trigger: ACAGGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGGGCACAGAGTGGGAGAAGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CAA 72 bp | GCTACCTTCTCCCACTCTGTGCCCGGGGTCTCCTCCTaGGATTCTTTCACAAAAGCCTCTTCCGATGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ATFSHSVPGVSS*DSFTKASSDAT Trigger: TGTGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGGGCACAGAGTGGGAGAAGGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS CCA 72 bp | CTACCTTCTCCCACTCTGTGCCCGGGGTCTCCTCCTTaGATTCTTTCACAAAAGCCTCTTCCGATGCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: LPSPTLCPGSPP*ILSQKPLPMPH Trigger: ATGTGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAAGGAGGAGACCCCGGGCACAGAGTGGGAGAAGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS CAA 90 bp | GTCAGCGATCCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTaGGCGCTGGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSDPVVDLVLLNLFT*ALVPLLQVFLGLLP Trigger: CGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGATCGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS CAA 90 bp | TTCCGATGCCCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTaGGCGCTGGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: FRCPVVDLVLLNLFT*ALVPLLQVFLGLLP Trigger: CGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGGCATCGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CAA 90 bp | GTGGTGTTTGCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTaGGCGCTGGTTCCACTCCTCCAGGTCTTTCTTGGCCTTCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VVFAVVDLVLLNLFT*ALVPLLQVFLGLLP Trigger: CGGGAGAAGGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGCAAACACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140142.8 |
||
| CDS CCA 72 bp | CTCTTCCGATGCCACATAGCCAATGGTATCAGCATCTaGCTGCTGGTAGAACGCTTTGTCAGCGATCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LFRCHIANGISI*LLVERFVSDPV Trigger: AACAGGATCGCTGACAAAGCGTTCTACCAGCAGCCAGATGCTGATACCATTGGCTATGTGGCATCGGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS CCA 72 bp | CTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTTaGCGCTGGTTCCACTCCTCCAGGTCTTTCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLILFFSTCSL*RWFHSSRSFLA Trigger: GGCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 ENSMUST00000140142.8 |
||
| CDS CAA 72 bp | CCTGTTGTTGATCTTGTTCTTCTCAACCTGTTCACTTaGGCGCTGGTTCCACTCCTCCAGGTCTTTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PVVDLVLLNLFT*ALVPLLQVFLG Trigger: GCCAAGAAAGACCTGGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049575.8 ENSMUST00000091609.11 |
||
| CDS CCA 72 bp | CTTTCACAAAAGCCTCTTCCGATGCCACATAGCCAATaGTATCAGCATCTGGCTGCTGGTAGAACGCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSQKPLPMPHSQ*YQHLAAGRTLC Trigger: ACAAAGCGTTCTACCAGCAGCCAGATGCTGATACCATTGGCTATGTGGCATCGGAAGAGGCTTTTGTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049575.8 |
||
| CDS CAA 90 bp | TTGGATTCTTTCACAAAAGCCTCTTCCGATGCCCTGTTGTTGATCTaGTTCTTCTCAACCTGTTCACTTTGGCGCTGGTTCCACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LDSFTKASSDALLLI*FFSTCSLWRWFHSS Trigger: GGAGGAGTGGAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CAA 72 bp | TTCACAAAAGCCTCTTCCGATGCCCTGTTGTTGATCTaGTTCTTCTCAACCTGTTCACTTTGGCGCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTKASSDALLLI*FFSTCSLWRWF Trigger: GAACCAGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGGCATCGGAAGAGGCTTTTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CAA 72 bp | GATTCTTTCACAAAAGCCTCTTCCGATGCCCTGTTGTaGATCTTGTTCTTCTCAACCTGTTCACTTTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DSFTKASSDALL*ILFFSTCSLWR Trigger: GCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGGCATCGGAAGAGGCTTTTGTGAAAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS TCA 72 bp | ATTCTTTCACAAAAGCCTCTTCCGATGCCCTGTTGTTaGTCTTGTTCTTCTCAACCTGTTCACTTTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ILSQKPLPMPCC*SCSSQPVHFGA Trigger: AGCGCCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGGCATCGGAAGAGGCTTTTGTGAAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||
| CDS CAA 72 bp | TTGGATTCTTTCACAAAAGCCTCTTCCGATGCCCTGTaGTTGATCTTGTTCTTCTCAACCTGTTCACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LDSFTKASSDAL*LILFFSTCSLW Trigger: CCAAAGTGAACAGGTTGAGAAGAACAAGATCAACAACAGGGCATCGGAAGAGGCTTTTGTGAAAGAATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091609.11 |
||