Pregenerated sensors for CLSTN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039953Ensembl transcript IDs: ENSMUST00000039144.7, ENSMUST00000105691.8
Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GTCGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTaGTGTCCTCTCCCTGGCCGACAGGGAACTCCAGACACACTTGGG | + |
Preference number: 1 (lower is better) Translates to: VDKSAQCGFSGGPRC*CPLPGRQGTPDTLG Trigger: CCCAAGTGTGTCTGGAGTTCCCTGTCGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR TCA 90 bp | GTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGAGCCTaGCCGCCTGCACCTTTGCTGTCCGTTCCCAGCTACACCATTTCA | + |
Preference number: 1 (lower is better) Translates to: VVQTCSEPWSSKRGA*PPAPLLSVPSYTIS Trigger: TGAAATGGTGTAGCTGGGAACGGACAGCAAAGGTGCAGGCGGTCAGGCTCCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CCA 90 bp | CAGCACGGCGGCATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTaGATGTCCCAGCTGGAGCAGTCTAAACTCTTGACTGTGAATGAA | + |
Preference number: 1 (lower is better) Translates to: QHGGILRTSSNSSED*MSQLEQSKLLTVNE Trigger: TTCATTCACAGTCAAGAGTTTAGACTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGATGCCGCCGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR GCA 90 bp | GAGCATTGTAGCAGTTTATCTTTGGGCCTCGGGGTCTCCTTTTGGTaGTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGG | + |
Preference number: 1 (lower is better) Translates to: EHCSSLSLGLGVSFW*CCADLLRTVVFQAR Trigger: CCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGATAAACTGCTACAATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CCA 90 bp | CTGGAGCATTGTAGCAGTTTATCTTTGGGCCTCGGGGTCTCCTTTTaGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCG | + |
Preference number: 1 (lower is better) Translates to: LEHCSSLSLGLGVSF*CCCADLLRTVVFQA Trigger: CGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGATAAACTGCTACAATGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CCA 90 bp | TGGGTCTTAGATCTTAGCCCAAACCCAACAGCACGCGGCATCCCATaGGGCCTCTGGGGAGGAGAGAAAAGATTGTTCTGGAGCATTGTA | + |
Preference number: 1 (lower is better) Translates to: WVLDLSPNPTARGIP*GLWGGEKRLFWSIV Trigger: TACAATGCTCCAGAACAATCTTTTCTCTCCTCCCCAGAGGCCCCATGGGATGCCGCGTGCTGTTGGGTTTGGGCTAAGATCTAAGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGGTGGGGCCCCTGCCCTaGGGAGGAAGCGCCAGCTTC | + |
Preference number: 2 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPVGPLP*GGSASF Trigger: GAAGCTGGCGCTTCCTCCCCAGGGCAGGGGCCCCAC...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGGGCTGGGAGAGAGTCTaGAGAGCAGGCGCTGAGTGC | + |
Preference number: 2 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPGWERV*RAGAEC Trigger: GCACTCAGCGCCTGCTCTCCAGACTCTCTCCCAGCC...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTGGGTCTGAGGTGCTGTaGGGCCCCTGCCCTGGGGAG | + |
Preference number: 2 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSGSEVL*GPCPGE Trigger: CTCCCCAGGGCAGGGGCCCCACAGCACCTCAGACCC...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | AAGAAAGCAGCTACAGGGGACAGGACATGGGAGGGCGGCCACAGACAGCACGGCGGGTCTGAGGTGCTGTaGGGCCCCTGCCCTGGGGAG | + |
Preference number: 2 (lower is better) Translates to: KKAATGDRTWEGGHRQHGGSEVL*GPCPGE Trigger: CTCCCCAGGGCAGGGGCCCCACAGCACCTCAGACCC...GCCGTGCTGTCTGTGGCCGCCCTCCCATGTCCTGTCCCCTGTAGCTGCTTTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCTACATCGTGGACCCGTaGGGCTGGGAGAGAGTCTGG | + |
Preference number: 2 (lower is better) Translates to: PLSAASLEVPGAGVLSLAYIVDP*GWERVW Trigger: CCAGACTCTCTCCCAGCCCCACGGGTCCACGATGTA...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCGTGGACCCGTGGGGCTaGGAGAGAGTCTGGAGAGCA | + |
Preference number: 2 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPVDPWG*ERVWRA Trigger: TGCTCTCCAGACTCTCTCCCAGCCCCACGGGTCCAC...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTGGAGGGTGGAGCCGGTaGTCCCACACACCAAGCACG | + |
Preference number: 2 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSGGWSR*SHTPST Trigger: CGTGCTTGGTGTGTGGGACCACCGGCTCCACCCTCC...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | AAGAAAGCAGCTACAGGGGACAGGACATGGGAGGGCGGCCACAGACAGCACGGCGGAGGGTGGAGCCGGTaGTCCCACACACCAAGCACG | + |
Preference number: 2 (lower is better) Translates to: KKAATGDRTWEGGHRQHGGGWSR*SHTPST Trigger: CGTGCTTGGTGTGTGGGACCACCGGCTCCACCCTCC...GCCGTGCTGTCTGTGGCCGCCCTCCCATGTCCTGTCCCCTGTAGCTGCTTTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR TCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCGCAAAACTGCAATGGTaGTGGGCGGGGAGGGTGGAG | + |
Preference number: 2 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLAKLQW*WAGRVE Trigger: CTCCACCCTCCCCGCCCATCACCATTGCAGTTTTGC...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | TACAGGAAAGGCCAGGGGCTTTGGCAACATCCTGGCTGTTCCCAGCCTCTAATGGTGGGGCCCCTGCCCTaGGGAGGAAGCGCCAGCTTC | + |
Preference number: 2 (lower is better) Translates to: YRKGQGLWQHPGCSQPLMVGPLP*GGSASF Trigger: GAAGCTGGCGCTTCCTCCCCAGGGCAGGGGCCCCAC...CATTAGAGGCTGGGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | GGCTGCCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTTGGCAACATCCTGATGGCCCCGGCCACGTaGCTGTACGGAAACCCTAGC | + |
Preference number: 2 (lower is better) Translates to: GCQSQACTGKARGFGNILMAPAT*LYGNPS Trigger: GCTAGGGTTTCCGTACAGCCACGTGGCCGGGGCCAT...CAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CAA 90 bp | CCACGTGGCTGTACGGAAACCCTAGCAAGGGTGGGCCCCAGTGACTaGGGCCTCTCCAACCTGGTTTCTTGGGAGGGAAGAGGGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: PRGCTETLARVGPSD*GLSNLVSWEGRGRK Trigger: CTTCCTCCCTCTTCCCTCCCAAGAAACCAGGTTGGAGAGGCCCAAGTCACTGGGGCCCACCCTTGCTAGGGTTTCCGTACAGCCACGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR TCA 90 bp | CACGGCGGCATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGGCAAAACTGCAATGGTaGTGGGCGGGGAGGGTGGAG | + |
Preference number: 2 (lower is better) Translates to: HGGILRTSSNSSEDWMSQAKLQW*WAGRVE Trigger: CTCCACCCTCCCCGCCCATCACCATTGCAGTTTTGC...CTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGATGCCGCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTAACTCCAGACACACTTaGGGTCTGAGGTGCTGTGGG | + |
Preference number: 2 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSNSRHT*GLRCCG Trigger: CCCACAGCACCTCAGACCCCAAGTGTGTCTGGAGTT...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR CAA 90 bp | CATGTGGCTGCCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTaGGCAACATCCTGGCTGTTCCCAGCCTCTAATGTGGTTGGAGGC | + |
Preference number: 2 (lower is better) Translates to: HVAASHRRVQERPGA*ATSWLFPASNVVGG Trigger: GCCTCCAACCACATTAGAGGCTGGGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGGCAGCCACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR GCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCAGTGGGGGAAGGGTCTaGAGACCTGCTGGTCAAAAT | + |
Preference number: 2 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLSGGRV*RPAGQN Trigger: ATTTTGACCAGCAGGTCTGCAGACCCTTCCCCCACT...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | TACAGGAAAGGCCAGGGGCTTTGGCAACATCCTGGCTGTTCCCAGCCTCTAATGGGCTGGGAGAGAGTCTaGAGAGCAGGCGCTGAGTGC | + |
Preference number: 2 (lower is better) Translates to: YRKGQGLWQHPGCSQPLMGWERV*RAGAEC Trigger: GCACTCAGCGCCTGCTCTCCAGACTCTCTCCCAGCC...CATTAGAGGCTGGGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CACGGCGGCATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGAAAGGCCAGGGGCTTTaGCAACATCCTGGCTGTTCC | + |
Preference number: 2 (lower is better) Translates to: HGGILRTSSNSSEDWMSQKGQGL*QHPGCS Trigger: GGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTT...CTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGATGCCGCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR TCA 90 bp | TCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGAGCACGGGAGGACTTTaGGCAGTGGGGGAAGGGTCT | + |
Preference number: 2 (lower is better) Translates to: SFWCCCADLLRTVVFQARSTGGL*AVGEGS Trigger: AGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCT...CCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR GCA 90 bp | TCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGGACAAGTCCGCTCAGTaGGGCTTCTCTGGAGGTCCC | + |
Preference number: 2 (lower is better) Translates to: SFWCCCADLLRTVVFQARDKSAQ*GFSGGP Trigger: GGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC...CCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR TCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCACCTGCTGGTCAAAATaGTTTTGTACATCGTGGACC | + |
Preference number: 2 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLTCWSK*FCTSWT Trigger: GGTCCACGATGTACAAAATCATTTTGACCAGCAGGT...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR-3UTR GCA 90 bp | AAGAGGGAGGAAGAGGCCCTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCAGTGGGGGAAGGGTCTaGAGACCTGCTGGTCAAAAT | + |
Preference number: 2 (lower is better) Translates to: KREEEALLAPHSDFTFLSSGGRV*RPAGQN Trigger: ATTTTGACCAGCAGGTCTGCAGACCCTTCCCCCACT...GGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAGGGCCTCTTCCTCCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | CTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTGGACTACTAGCACAGAGGAGGACTTTGAGCAGTaGGGGAAGGGTCTGCAGACC | + |
Preference number: 2 (lower is better) Translates to: LLAPHSDFTFLSWTTSTEEDFEQ*GKGLQT Trigger: GGTCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTC...CTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | GTGTACAGGAAAGGCCAGGGGCTTTGGCAACATCCTGGCTGTTCCCAGCCTCTATCCAACCTGGTTTCTTaGGAGGGAAGAGGGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: VYRKGQGLWQHPGCSQPLSNLVS*EGRGRK Trigger: CTTCCTCCCTCTTCCCTCCCAAGAAACCAGGTTGGA...TAGAGGCTGGGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | GACTTTACATTCCTGTCCTGGACTACTAGCACAGAGGACACACAGAATCCCAATGTGGACCCGTGGGGCTaGGAGAGAGTCTGGAGAGCA | + |
Preference number: 2 (lower is better) Translates to: DFTFLSWTTSTEDTQNPNVDPWG*ERVWRA Trigger: TGCTCTCCAGACTCTCTCCCAGCCCCACGGGTCCAC...ATTGGGATTCTGTGTGTCCTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CCA 90 bp | GCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTTTACATTCCTGTCCTaGACTACTAGCACAGAGGAC | + |
Preference number: 2 (lower is better) Translates to: ASGSPFGAVVQTCSEPWSFTFLS*TTSTED Trigger: GTCCTCTGTGCTAGTAGTCCAGGACAGGAATGTAAA...AGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR TCA 90 bp | TTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGAGCCACCTGCTGGTCAAAATaGTTTTGTACATCGTGGACC | + |
Preference number: 2 (lower is better) Translates to: FGAVVQTCSEPWSSKRGATCWSK*FCTSWT Trigger: GGTCCACGATGTACAAAATCATTTTGACCAGCAGGT...GGCTCCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CCA 72 bp | TCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTaGTGTCCTCTCCCTGGCCGACAGGGAACTCCAGAC | + |
Preference number: 3 (lower is better) Translates to: SAQCGFSGGPRC*CPLPGRQGTPD Trigger: GTCTGGAGTTCCCTGTCGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR CCA 72 bp | ACCCTCTGTCGACAAGTCCGCTCAGTGCGGCTTCTCTaGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCG | + |
Preference number: 3 (lower is better) Translates to: TLCRQVRSVRLL*RSQVLVSSPWP Trigger: CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCGACAGAGGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR TCA 72 bp | ACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGAGCCTaGCCGCCTGCACCTTTGCTGTCCGTTCCCAGCTAC | + |
Preference number: 3 (lower is better) Translates to: TCSEPWSSKRGA*PPAPLLSVPSY Trigger: GTAGCTGGGAACGGACAGCAAAGGTGCAGGCGGTCAGGCTCCTCGCTTGGAAGACCACGGTTCTGAGCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CCA 72 bp | CGTGTACAGGAAAGGCCAGGGGCTTTGGCAACATCCTaGCTGTTCCCAGCCTCTAATGTGGTTGGAGGCTCG | + |
Preference number: 3 (lower is better) Translates to: RVQERPGALATS*LFPASNVVGGS Trigger: CGAGCCTCCAACCACATTAGAGGCTGGGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CCA 72 bp | CCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTTaGCAACATCCTGGCTGTTCCCAGCCTCTAATGTGG | + |
Preference number: 3 (lower is better) Translates to: PVTGVYRKGQGL*QHPGCSQPLMW Trigger: CCACATTAGAGGCTGGGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CCA 72 bp | TTTCCATCTAAGAAAGCAGCTACAGGGGACAGGACATaGGAGGGCGGCCACAGACAGCACGGCGGCATCCTT | + |
Preference number: 3 (lower is better) Translates to: FPSKKAATGDRT*EGGHRQHGGIL Trigger: AAGGATGCCGCCGTGCTGTCTGTGGCCGCCCTCCCATGTCCTGTCCCCTGTAGCTGCTTTCTTAGATGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CAA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCTGGTCAAAATGATTTaGTACATCGTGGACCCGTGG | + |
Preference number: 3 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLLVKMI*YIVDPW Trigger: CCACGGGTCCACGATGTACAAAATCATTTTGACCAG...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR CCA 72 bp | GATCTTAGCCCAAACCCAACAGCACGCGGCATCCCATaGGGCCTCTGGGGAGGAGAGAAAAGATTGTTCTGG | + |
Preference number: 3 (lower is better) Translates to: DLSPNPTARGIP*GLWGGEKRLFW Trigger: CCAGAACAATCTTTTCTCTCCTCCCCAGAGGCCCCATGGGATGCCGCGTGCTGTTGGGTTTGGGCTAAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR-3UTR CAA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGACTGGTCAAAATGATTTaGTACATCGTGGACCCGTGG | + |
Preference number: 3 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRLVKMI*YIVDPW Trigger: CCACGGGTCCACGATGTACAAAATCATTTTGACCAG...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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3UTR GCA 72 bp | AGCAGTTTATCTTTGGGCCTCGGGGTCTCCTTTTGGTaGTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTC | + |
Preference number: 3 (lower is better) Translates to: SSLSLGLGVSFW*CCADLLRTVVF Trigger: GAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGATAAACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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3UTR CCA 72 bp | TGTAGCAGTTTATCTTTGGGCCTCGGGGTCTCCTTTTaGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTC | + |
Preference number: 3 (lower is better) Translates to: CSSLSLGLGVSF*CCCADLLRTVV Trigger: GACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGATAAACTGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGCTGCGCGGGCAAAGTaGTGGACGCCACTCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLAAARAK*WTPLRL Trigger: CAGCCTGAGTGGCGTCCACCACTTTGCCCGCGCAGC...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGAGGACGGGAGCAGCTCTaGGGTGCCGGCAGCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRGREQL*GAGSSP Trigger: GGGGCTGCTGCCGGCACCTCAGAGCTGCTCCCGTCC...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGTCCCGCATCGTTCGCTaGTGTGCAGCCCGGATCCGA | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPSRIVR*CAARIR Trigger: TCGGATCCGGGCTGCACATCAGCGAACGATGCGGGA...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCCTGCTGCTCCAGCCTTaGCACCCGGGGCTGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPLLLQP*HPGLQV Trigger: CACCTGCAGCCCCGGGTGGCAAGGCTGGAGCAGCAG...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCTCTCCAGCTCCACCGTaGCCTGCACAGAGGCGACAG | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLASPAPP*PAQRRQ Trigger: CTGTCGCCTCTGTGCAGGCCACGGTGGAGCTGGAGA...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGCGCGGGCAAAGTGGTaGACGCCACTCAGGCTGATC | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLAARAKW*TPLRLI Trigger: GATCAGCCTGAGTGGCGTCCACCACTTTGCCCGCGC...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGGCTGGGCAGCCATGTaGTTGGCATGTTCCACGGGG | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLAGWAAM*LACSTG Trigger: CCCCGTGGAACATGCCAACCACATGGCTGCCCAGCC...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGTGGTCTCCACGCCTGTaGAGACCACACCCAGGTCAG | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPWSPRL*RPHPGQ Trigger: CTGACCTGGGTGTGGTCTTCACAGGCGTGGAGACCA...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGCTTCGATGCCCTTCTaGTGGAGGCGGGTCACGTCT | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLAASMPF*WRRVTS Trigger: AGACGTGACCCGCCTCCAGCAGAAGGGCATCGAAGC...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCCCACAGCCTCCACCCTaGGGATGCTGCTGTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPPQPPP*GCCCAA Trigger: AGCAGCACAGCAGCATCCTCAGGGTGGAGGCTGTGG...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTGGACGGGAGCAGCTCTaGGGTGCCGGCAGCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: ASGSPFGAVVQTCSEPWSGREQL*GAGSSP Trigger: GGGGCTGCTGCCGGCACCTCAGAGCTGCTCCCGTCC...AGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGCATCCCCTTCCACTGTaGCCTCACAGGTGTCCAGGT | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPHPLPL*PHRCPG Trigger: ACCTGGACACCTGTGAGGTCACAGTGGAAGGGGATG...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCTGCGGGGAGCAGTCTaGGTCCACAGCCTCCACCCT | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSLRGAV*VHSLHP Trigger: AGGGTGGAGGCTGTGGACGCAGACTGCTCCCCGCAG...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGACCTCCAGGCTCTCCTaGTCTGCGTTCAGCTCATCC | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPTSRLS*SAFSSS Trigger: GGATGAGCTGAACGCAGAGCAGGAGAGCCTGGAGGT...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTCCCAGAACGGACTGTaGGGCCAGCCAGGTTACCTC | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPSQNGL*GQPGYL Trigger: GAGGTAACCTGGCTGGCCTCACAGTCCGTTCTGGGA...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGATGCTGCTGTGCTGCTTaGCCTCCACCACGGCCGCCT | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRCCCAA*PPPRPP Trigger: AGGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCA...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCAGGATGCTGCTGTGCTaGTTGCCCTCCACCACGGCC | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLRMLLC*LPSTTA Trigger: GGCCGTGGTGGAGGGCAAGCAGCACAGCAGCATCCT...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCCTGAGGATGCTGCTGTaGTGCTTGCCCTCCACCACG | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPLRMLL*CLPSTT Trigger: CGTGGTGGAGGGCAAGCAGCACAGCAGCATCCTCAG...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGAACCTCCTCGTAGCTTaGCATGGTCTCCACGCCTGT | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPNLLVA*HGLHAC Trigger: ACAGGCGTGGAGACCATGGCAAGCTACGAGGAGGTT...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGGGTGGGCTCGAGCCATaGCTTGTGCTTGTTAACTCG | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPGGLEP*LVLVNS Trigger: CGAGTTAACAAGCACAAGCCATGGCTCGAGCCCACC...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCTCAAGACCGCCTGGCTaGAGCTTGCTTGGATCTGCA | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLASRPPG*SLLGSA Trigger: TGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGA...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTCGATGCCCTTCTGCTaGAGGCGGGTCACGTCTACC | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPSMPFC*RRVTST Trigger: GGTAGACGTGACCCGCCTCCAGCAGAAGGGCATCGA...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGGATCCAGCAGGGACCTaGTGTGCCAATTCCGATAGC | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPDPAGT*CANSDS Trigger: GCTATCGGAATTGGCACACCAGGTCCCTGCTGGATC...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTTCCCAGAACGGACTGTaGGGCCAGCCAGGTTACCTC | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSSQNGL*GQPGYL Trigger: GAGGTAACCTGGCTGGCCTCACAGTCCGTTCTGGGA...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGAAGGATGCTGCTGTGCTaGTTGCCCTCCACCACGGCC | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRRMLLC*LPSTTA Trigger: GGCCGTGGTGGAGGGCAAGCAGCACAGCAGCATCCT...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGCTGCTGCTCCAGCCTTaGCACCCGGGGCTGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQLLLQP*HPGLQV Trigger: CACCTGCAGCCCCGGGTGGCAAGGCTGGAGCAGCAG...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGTCCTCCTCACTGCTGTaGTGGTCCTCATATGTCTCC | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPSSSLL*WSSYVS Trigger: GGAGACATATGAGGACCAGCACAGCAGTGAGGAGGA...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CACGGCGGCATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGGGCTGGGCAGCCATGTaGTTGGCATGTTCCACGGGG | + |
Preference number: 4 (lower is better) Translates to: HGGILRTSSNSSEDWMSQGWAAM*LACSTG Trigger: CCCCGTGGAACATGCCAACCACATGGCTGCCCAGCC...CTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGATGCCGCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCCAAACGGGTGAGGATTaGCCAGGTTGTGACCAGACA | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLAQTGED*PGCDQT Trigger: TGTCTGGTCACAACCTGGCCAATCCTCACCCGTTTG...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCGGATTGGCCAGGTTGTaGCCAGACAGGTCCACAAAG | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPGLARL*PDRSTK Trigger: CTTTGTGGACCTGTCTGGTCACAACCTGGCCAATCC...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCAGACTCGGCACTGGTaGTGTCTTCCTCTTCCTCCC | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSQTRHW*CLPLPP Trigger: GGGAGGAAGAGGAAGACATCACCAGTGCCGAGTCTG...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTGGAGGAAAACTAGCCTaGACCCGTGGACGTAGAGCG | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSGGKLA*TRGRRA Trigger: CGCTCTACGTCCACGGGTGCAGGCTAGTTTTCCTCC...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCGGAGGAAAACTAGCCTaGACCCGTGGACGTAGAGCG | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLGGKLA*TRGRRA Trigger: CGCTCTACGTCCACGGGTGCAGGCTAGTTTTCCTCC...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCCAGGCTCAGTCTCATTaGCACTCTCCACTCCTGAAT | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLAQAQSH*HSPLLN Trigger: ATTCAGGAGTGGAGAGTGGCAATGAGACTGAGCCTG...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGCAGGTGTCCAGGTCATaGACAATTTCCTCTGACACC | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPQVSRS*TISSDT Trigger: GGTGTCAGAGGAAATTGTGCATGACCTGGACACCTG...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCAGGCTCTCCTGCTCTaGGTTCAGCTCATCCCCTTC | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLQALLL*VQLIPF Trigger: GAAGGGGATGAGCTGAACGCAGAGCAGGAGAGCCTG...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CACGGCGGCATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGGCTTCGATGCCCTTCTaGTGGAGGCGGGTCACGTCT | + |
Preference number: 4 (lower is better) Translates to: HGGILRTSSNSSEDWMSQASMPF*WRRVTS Trigger: AGACGTGACCCGCCTCCAGCAGAAGGGCATCGAAGC...CTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGATGCCGCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CACGGCGGCATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGAGTGGCTTGCTTCGATaGCCTTCTGCTGGAGGCGGG | + |
Preference number: 4 (lower is better) Translates to: HGGILRTSSNSSEDWMSQSGLLR*PSAGGG Trigger: CCCGCCTCCAGCAGAAGGGCATCGAAGCAAGCCACT...CTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGATGCCGCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCTTCCTCCTCCTCACTaGTCTCAGACTCGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSLPPPH*SQTRHW Trigger: CCAGTGCCGAGTCTGAGAGCAGTGAGGAGGAGGAAG...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCTTCCTCCTCCTCACTaGTCTCAGACTCGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLLPPPH*SQTRHW Trigger: CCAGTGCCGAGTCTGAGAGCAGTGAGGAGGAGGAAG...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCTTTCCCTATGTGGCTaGTCTCCAGCTCCACCGTGG | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSLSLCG*SPAPPW Trigger: CCACGGTGGAGCTGGAGACCAGCCACATAGGGAAAG...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCAGCCTTTCCCTATGTaGCTGGTCTCCAGCTCCACC | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSQPFPM*LVSSST Trigger: GGTGGAGCTGGAGACCAGCCACATAGGGAAAGGCTG...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTGCTGCGCGGGCAAAGTaGTGGACGCCACTCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: ASGSPFGAVVQTCSEPWSAARAK*WTPLRL Trigger: CAGCCTGAGTGGCGTCCACCACTTTGCCCGCGCAGC...AGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCCATGTTCCACGGGGTTaGCTGTGTGGATCACATTCA | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLAHVPRG*LCGSHS Trigger: TGAATGTGATCCACACAGCCAACCCCGTGGAACATG...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGAGGGCAGCCATGTGGTTaGCATGTTCCACGGGGTTGG | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRGQPCG*HVPRGW Trigger: CCAACCCCGTGGAACATGCCAACCACATGGCTGCCC...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTTGGACGAACTGTGGCTaGGCAGCCATGTGGTTGGCA | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSWTNCG*AAMWLA Trigger: TGCCAACCACATGGCTGCCCAGCCACAGTTCGTCCA...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCTGTACGACTTCTCCTTaGACACGGGGGCGTACTCGT | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLCTTSP*TRGRTR Trigger: ACGAGTACGCCCCCGTGTTCAAGGAGAAGTCGTACA...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGCCACAGCCTCCACCCTaGGGATGCTGCTGTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQPQPPP*GCCCAA Trigger: AGCAGCACAGCAGCATCCTCAGGGTGGAGGCTGTGG...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTGGATTGGCCAGGTTGTaGCCAGACAGGTCCACAAAG | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSGLARL*PDRSTK Trigger: CTTTGTGGACCTGTCTGGTCACAACCTGGCCAATCC...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGACAGACTCGGCACTGGTaGTGTCTTCCTCTTCCTCCC | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRQTRHW*CLPLPP Trigger: GGGAGGAAGAGGAAGACATCACCAGTGCCGAGTCTG...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | TTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGAGCCCTGCGGGGAGCAGTCTaGGTCCACAGCCTCCACCCT | + |
Preference number: 4 (lower is better) Translates to: FGAVVQTCSEPWSSKRGALRGAV*VHSLHP Trigger: AGGGTGGAGGCTGTGGACGCAGACTGCTCCCCGCAG...GGCTCCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCGGAATCCTCACGGCCTaGGTGCCGTTGAACTCAAAG | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLGILTA*VPLNSK Trigger: CTTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCC...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGTTGAGGACAAAGTGGTaGCAGTCCTCATCACAGACT | + |
Preference number: 4 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPLRTKW*QSSSQT Trigger: AGTCTGTGATGAGGACTGGCACCACTTTGTCCTCAA...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGTTCAGCTTCCAGTaGAACTCCGCAGGCCTGTAT | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPWFSFQ*NSAGLY Trigger: ATACAGGCCTGCGGAGTTCCACTGGAAGCTGAACCA...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCTCCTCATCACAGACTTaGTTCAGCTTCCAGTGGAAC | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLASSSQT*FSFQWN Trigger: GTTCCACTGGAAGCTGAACCAAGTCTGTGATGAGGA...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTACACCCAGGTCAGAGTaGCTTGCTTCGATGCCCTTC | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSTPRSE*LASMPF Trigger: GAAGGGCATCGAAGCAAGCCACTCTGACCTGGGTGT...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | AAGAAAGCAGCTACAGGGGACAGGACATGGGAGGGCGGCCACAGACAGCACGGCACACCCAGGTCAGAGTaGCTTGCTTCGATGCCCTTC | + |
Preference number: 4 (lower is better) Translates to: KKAATGDRTWEGGHRQHGTPRSE*LASMPF Trigger: GAAGGGCATCGAAGCAAGCCACTCTGACCTGGGTGT...GCCGTGCTGTCTGTGGCCGCCCTCCCATGTCCTGTCCCCTGTAGCTGCTTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCGATCGATGTTCAGGGTaGACGAACTGTGGCTGGGCA | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLDRCSG*TNCGWA Trigger: TGCCCAGCCACAGTTCGTCCACCCTGAACATCGATC...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGAGGTCCAGCCCCTCCTTaGAGGTGTAGAGACAGTCAA | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRGPAPP*RCRDSQ Trigger: TTGACTGTCTCTACACCTGCAAGGAGGGGCTGGACC...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGACAGGTCAGAGTGGCTTaGTTCGATGCCCTTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRQVRVA*FDALLL Trigger: CAGCAGAAGGGCATCGAAGCAAGCCACTCTGACCTG...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
||
CDS-3UTR GCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCTCCTCCTCACTGCTGTaGTGGTCCTCATATGTCTCC | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLSSSLL*WSSYVS Trigger: GGAGACATATGAGGACCAGCACAGCAGTGAGGAGGA...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTTATTCCCTCACCCGTaGACTTATCCACTACCACGG | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPLFPHP*TYPLPR Trigger: CCGTGGTAGTGGATAAGTCCACGGGTGAGGGAATAA...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCTAGGACGTCCTCGGTaGCTCTTTTCTTCCCACAGT | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLLGRPR*LFSSHS Trigger: ACTGTGGGAAGAAAAGAGCCACCGAGGACGTCCTAG...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | TCTTTGGGCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCTCTCCAGCTCCACCGTaGCCTGCACAGAGGCGACAG | + |
Preference number: 4 (lower is better) Translates to: SLGLGVSFWCCCADLLRTSPAPP*PAQRRQ Trigger: CTGTCGCCTCTGTGCAGGCCACGGTGGAGCTGGAGA...GGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGTCGATGCCCTTCTGCTaGAGGCGGGTCACGTCTACC | + |
Preference number: 4 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQSMPFC*RRVTST Trigger: GGTAGACGTGACCCGCCTCCAGCAGAAGGGCATCGA...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
||
CDS-3UTR CCA 90 bp | GCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTGGGCAGCCATGTGGTTaGCATGTTCCACGGGGTTGG | + |
Preference number: 4 (lower is better) Translates to: ASGSPFGAVVQTCSEPWSGQPCG*HVPRGW Trigger: CCAACCCCGTGGAACATGCCAACCACATGGCTGCCC...AGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCGCTCCGACCACAAGCTaGGTCTCTATTTTGGTTGGA | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLAPTTS*VSILVG Trigger: TCCAACCAAAATAGAGACTCAGCTTGTGGTCGGAGC...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | TCTTTGGGCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCTGGTCTCCACGCCTGTaGAGACCACACCCAGGTCAG | + |
Preference number: 4 (lower is better) Translates to: SLGLGVSFWCCCADLLRTWSPRL*RPHPGQ Trigger: CTGACCTGGGTGTGGTCTTCACAGGCGTGGAGACCA...GGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTGGACTACTAGCACAGAGTCCCGCATCGTTCGCTaGTGTGCAGCCCGGATCCGA | + |
Preference number: 4 (lower is better) Translates to: LLAPHSDFTFLSWTTSTESRIVR*CAARIR Trigger: TCGGATCCGGGCTGCACATCAGCGAACGATGCGGGA...CTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGGGAGCAGCTCTGAGGTaGCGGCAGCAGCCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWGAALR*RQQPHR Trigger: TCTGTGGGGCTGCTGCCGGCACCTCAGAGCTGCTCC...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCCTGTCTTATCCGAACTaGAGAGAATTGTCTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: PLSAASLEVPGAGVLSLALSYPN*RELSPS Trigger: AGAAGGAGACAATTCTCTGCAGTTCGGATAAGACAG...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTAAAAACTGTGTCATGTaGAGGTCGCCACCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSKNCVM*RSPPAE Trigger: CTCTGCAGGTGGCGACCTGCACATGACACAGTTTTT...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTCAGGCTCTCCTGCTCTaGGTTCAGCTCATCCCCTTC | + |
Preference number: 4 (lower is better) Translates to: ASGSPFGAVVQTCSEPWSQALLL*VQLIPF Trigger: GAAGGGGATGAGCTGAACGCAGAGCAGGAGAGCCTG...AGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GAAACCATGTGGCTGCCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTTGGAACCTCCTCGTAGCTTaGCATGGTCTCCACGCCTGT | + |
Preference number: 4 (lower is better) Translates to: ETMWLPVTGVYRKGQGLWNLLVA*HGLHAC Trigger: ACAGGCGTGGAGACCATGGCAAGCTACGAGGAGGTT...CCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGGCAGCCACATGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCACATTGAGGACAAAGTaGTGCCAGTCCTCATCACAG | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPTLRTK*CQSSSQ Trigger: CTGTGATGAGGACTGGCACCACTTTGTCCTCAATGT...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | AAGAGGGAGGAAGAGGCCCTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTGGACGAACTGTGGCTaGGCAGCCATGTGGTTGGCA | + |
Preference number: 4 (lower is better) Translates to: KREEEALLAPHSDFTFLSWTNCG*AAMWLA Trigger: TGCCAACCACATGGCTGCCCAGCCACAGTTCGTCCA...GGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAGGGCCTCTTCCTCCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCGTCCAGTTTCTCTTTTaGCCGGATTATTCCCTCACC | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLVQFLF*PDYSLT Trigger: GGTGAGGGAATAATCCGGTCAAAAGAGAAACTGGAC...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCTTGGAACTTCCACATTaGGGACAAAGTGGTGCCAGT | + |
Preference number: 4 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLLELPH*GQSGAS Trigger: ACTGGCACCACTTTGTCCTCAATGTGGAAGTTCCAA...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGAGCTCCGACCACAAGCTaGGTCTCTATTTTGGTTGGA | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRAPTTS*VSILVG Trigger: TCCAACCAAAATAGAGACTCAGCTTGTGGTCGGAGC...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGCAGGTCAGAGTGGCTTaGTTCGATGCCCTTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQQVRVA*FDALLL Trigger: CAGCAGAAGGGCATCGAAGCAAGCCACTCTGACCTG...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCGCTGAGTCTCTATTTTaGTTGGATGAAGCGGGTAGT | + |
Preference number: 4 (lower is better) Translates to: QVRSVRLLWRSQVLVSSPAESLF*LDEAGS Trigger: ACTACCCGCTTCATCCAACCAAAATAGAGACTCAGC...GGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTGGGACATTCTGCCCGTaGATTTTAAAGCCACAAATC | + |
Preference number: 4 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSGTFCP*ILKPQI Trigger: GATTTGTGGCTTTAAAATTCACGGGCAGAATGTCCC...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | TCTTTGGGCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGGCTGCAGGTGGGCTTaGCGCTTATCTTCACTAGGA | + |
Preference number: 4 (lower is better) Translates to: SLGLGVSFWCCCADLLRTGCRWA*RLSSLG Trigger: TCCTAGTGAAGATAAGCGTCAAGCCCACCTGCAGCC...GGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | TACAGGAAAGGCCAGGGGCTTTGGCAACATCCTGGCTGTTCCCAGCCTCTAATGGGAATCCTCACGGCCTaGGTGCCGTTGAACTCAAAG | + |
Preference number: 4 (lower is better) Translates to: YRKGQGLWQHPGCSQPLMGILTA*VPLNSK Trigger: CTTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCC...CATTAGAGGCTGGGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGAGTGGCTTGCTTCGATaGCCTTCTGCTGGAGGCGGG | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWSGLLR*PSAGGG Trigger: CCCGCCTCCAGCAGAAGGGCATCGAAGCAAGCCACT...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGACCTGGTCACTGTCATaGCCGTTGTCGGTGGGGAGG | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWTWSLS*PLSVGR Trigger: CCTCCCCACCGACAACGGCCATGACAGTGACCAGGT...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGATTGAACTCAAAGACCTaGTCACTGTCATGGCCGTTG | + |
Preference number: 4 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRLNSKT*SLSWPL Trigger: CAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAA...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | TCTTTGGGCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCTCTGCACGCCTCTGTTaGCATCTTCAGGGACCTGCA | + |
Preference number: 4 (lower is better) Translates to: SLGLGVSFWCCCADLLRTSARLC*HLQGPA Trigger: TGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGA...GGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GACTTTACATTCCTGTCCTGGACTACTAGCACAGAGGACACACAGAATCCCAATTGCTGCTGTGCTGCTTaGCCTCCACCACGGCCGCCT | + |
Preference number: 4 (lower is better) Translates to: DFTFLSWTTSTEDTQNPNCCCAA*PPPRPP Trigger: AGGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCA...ATTGGGATTCTGTGTGTCCTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | CTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTGGACTACTAGCACAGAGCATACTCAATTCTGCTaGTCCAGCCTTGCCACCCGG | + |
Preference number: 4 (lower is better) Translates to: LLAPHSDFTFLSWTTSTEHTQFC*SSLATR Trigger: CCGGGTGGCAAGGCTGGAGCAGCAGAATTGAGTATG...CTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | AAGTCGGTTGGCCATCTACATATTAACCCCCTCTGCTCTCCCACTTTATACATGGGAGCAGCTCTGAGGTaGCGGCAGCAGCCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: KSVGHLHINPLCSPTLYMGAALR*RQQPHR Trigger: TCTGTGGGGCTGCTGCCGGCACCTCAGAGCTGCTCC...CATGTATAAAGTGGGAGAGCAGAGGGGGTTAATATGTAGATGGCCAACCGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTAAAAACTGTGTCATGTaGAGGTCGCCACCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: ASGSPFGAVVQTCSEPWSKNCVM*RSPPAE Trigger: CTCTGCAGGTGGCGACCTGCACATGACACAGTTTTT...AGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGCAGGTGTCCAGGTCATaGACAATTTCCTCTGACACC | + |
Preference number: 4 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQQVSRS*TISSDT Trigger: GGTGTCAGAGGAAATTGTGCATGACCTGGACACCTG...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGACCTCCAGGCTCTCCTaGTCTGCGTTCAGCTCATCC | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWTSRLS*SAFSSS Trigger: GGATGAGCTGAACGCAGAGCAGGAGAGCCTGGAGGT...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | AAGAGGGAGGAAGAGGCCCTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTTATTCCCTCACCCGTaGACTTATCCACTACCACGG | + |
Preference number: 4 (lower is better) Translates to: KREEEALLAPHSDFTFLSLFPHP*TYPLPR Trigger: CCGTGGTAGTGGATAAGTCCACGGGTGAGGGAATAA...GGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAGGGCCTCTTCCTCCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGCAGCCTTTCCCTATGTaGCTGGTCTCCAGCTCCACC | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWQPFPM*LVSSST Trigger: GGTGGAGCTGGAGACCAGCCACATAGGGAAAGGCTG...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GAAACCATGTGGCTGCCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTTGGTCCTCATCACAGACTTaGTTCAGCTTCCAGTGGAAC | + |
Preference number: 4 (lower is better) Translates to: ETMWLPVTGVYRKGQGLWSSSQT*FSFQWN Trigger: GTTCCACTGGAAGCTGAACCAAGTCTGTGATGAGGA...CCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGGCAGCCACATGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GAAACCATGTGGCTGCCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTTGGGGGACATTCTGCCCGTaGATTTTAAAGCCACAAATC | + |
Preference number: 4 (lower is better) Translates to: ETMWLPVTGVYRKGQGLWGTFCP*ILKPQI Trigger: GATTTGTGGCTTTAAAATTCACGGGCAGAATGTCCC...CCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGGCAGCCACATGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGGGCTGCAGGTGGGCTTaGCGCTTATCTTCACTAGGA | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWGCRWA*RLSSLG Trigger: TCCTAGTGAAGATAAGCGTCAAGCCCACCTGCAGCC...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGTTGGAACTTCCACATTaGGGACAAAGTGGTGCCAGT | + |
Preference number: 4 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQLELPH*GQSGAS Trigger: ACTGGCACCACTTTGTCCTCAATGTGGAAGTTCCAA...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGCATACTCAATTCTGCTaGTCCAGCCTTGCCACCCGG | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWHTQFC*SSLATR Trigger: CCGGGTGGCAAGGCTGGAGCAGCAGAATTGAGTATG...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGGGTGGGCTCGAGCCATaGCTTGTGCTTGTTAACTCG | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWGGLEP*LVLVNS Trigger: CGAGTTAACAAGCACAAGCCATGGCTCGAGCCCACC...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | AAGAGGGAGGAAGAGGCCCTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTTGAACTCAAAGACCTaGTCACTGTCATGGCCGTTG | + |
Preference number: 4 (lower is better) Translates to: KREEEALLAPHSDFTFLSLNSKT*SLSWPL Trigger: CAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAA...GGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAGGGCCTCTTCCTCCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTGGACTACTAGCACAGAGTGGTTCAGCTTCCAGTaGAACTCCGCAGGCCTGTAT | + |
Preference number: 4 (lower is better) Translates to: LLAPHSDFTFLSWTTSTEWFSFQ*NSAGLY Trigger: ATACAGGCCTGCGGAGTTCCACTGGAAGCTGAACCA...CTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGTCTGCACGCCTCTGTTaGCATCTTCAGGGACCTGCA | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWSARLC*HLQGPA Trigger: TGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGA...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | TTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGAGCCCATGTTCCACGGGGTTaGCTGTGTGGATCACATTCA | + |
Preference number: 4 (lower is better) Translates to: FGAVVQTCSEPWSSKRGAHVPRG*LCGSHS Trigger: TGAATGTGATCCACACAGCCAACCCCGTGGAACATG...GGCTCCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGGATCGATGTTCAGGGTaGACGAACTGTGGCTGGGCA | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWDRCSG*TNCGWA Trigger: TGCCCAGCCACAGTTCGTCCACCCTGAACATCGATC...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | CTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTGGACTACTAGCACAGAGCAAACGGGTGAGGATTaGCCAGGTTGTGACCAGACA | + |
Preference number: 4 (lower is better) Translates to: LLAPHSDFTFLSWTTSTEQTGED*PGCDQT Trigger: TGTCTGGTCACAACCTGGCCAATCCTCACCCGTTTG...CTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | TCTTTGGGCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCTTGAGGACAAAGTGGTaGCAGTCCTCATCACAGACT | + |
Preference number: 4 (lower is better) Translates to: SLGLGVSFWCCCADLLRTLRTKW*QSSSQT Trigger: AGTCTGTGATGAGGACTGGCACCACTTTGTCCTCAA...GGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGCCCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | TCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGCAGGCTCAGTCTCATTaGCACTCTCCACTCCTGAAT | + |
Preference number: 4 (lower is better) Translates to: SFWCCCADLLRTVVFQARQAQSH*HSPLLN Trigger: ATTCAGGAGTGGAGAGTGGCAATGAGACTGAGCCTG...CCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGGCTGAGTCTCTATTTTaGTTGGATGAAGCGGGTAGT | + |
Preference number: 4 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQAESLF*LDEAGS Trigger: ACTACCCGCTTCATCCAACCAAAATAGAGACTCAGC...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | AAGAGGGAGGAAGAGGCCCTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCCTGTCTTATCCGAACTaGAGAGAATTGTCTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: KREEEALLAPHSDFTFLSLSYPN*RELSPS Trigger: AGAAGGAGACAATTCTCTGCAGTTCGGATAAGACAG...GGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAGGGCCTCTTCCTCCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGACTCCTGAATACTCTTaGCAGCAAGCTCCGACCACA | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWTPEYS*QQAPTT Trigger: TGTGGTCGGAGCTTGCTGGCAAGAGTATTCAGGAGT...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR TCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGGTCCAGTTTCTCTTTTaGCCGGATTATTCCCTCACC | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWVQFLF*PDYSLT Trigger: GGTGAGGGAATAATCCGGTCAAAAGAGAAACTGGAC...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR GCA 90 bp | AAGTCGGTTGGCCATCTACATATTAACCCCCTCTGCTCTCCCACTTTATACATGGGTCCAGCCCCTCCTTaGAGGTGTAGAGACAGTCAA | + |
Preference number: 4 (lower is better) Translates to: KSVGHLHINPLCSPTLYMGPAPP*RCRDSQ Trigger: TTGACTGTCTCTACACCTGCAAGGAGGGGCTGGACC...CATGTATAAAGTGGGAGAGCAGAGGGGGTTAATATGTAGATGGCCAACCGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGACATTGAGGACAAAGTaGTGCCAGTCCTCATCACAG | + |
Preference number: 4 (lower is better) Translates to: EGSADLLVKMILYIVDPWTLRTK*CQSSSQ Trigger: CTGTGATGAGGACTGGCACCACTTTGTCCTCAATGT...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | GACTTTACATTCCTGTCCTGGACTACTAGCACAGAGGACACACAGAATCCCAATGATCCAGCAGGGACCTaGTGTGCCAATTCCGATAGC | + |
Preference number: 4 (lower is better) Translates to: DFTFLSWTTSTEDTQNPNDPAGT*CANSDS Trigger: GCTATCGGAATTGGCACACCAGGTCCCTGCTGGATC...ATTGGGATTCTGTGTGTCCTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | TTAAAAATAAGAGAAATGGTTACTGACTGCGTGGGAGTAATTTTTCACCCTCTGGCGCGGGCAAAGTGGTaGACGCCACTCAGGCTGATC | + |
Preference number: 4 (lower is better) Translates to: LKIREMVTDCVGVIFHPLARAKW*TPLRLI Trigger: GATCAGCCTGAGTGGCGTCCACCACTTTGCCCGCGC...CAGAGGGTGAAAAATTACTCCCACGCAGTCAGTAACCATTTCTCTTATTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | TTAAAAATAAGAGAAATGGTTACTGACTGCGTGGGAGTAATTTTTCACCCTCTGACCTGGTCACTGTCATaGCCGTTGTCGGTGGGGAGG | + |
Preference number: 4 (lower is better) Translates to: LKIREMVTDCVGVIFHPLTWSLS*PLSVGR Trigger: CCTCCCCACCGACAACGGCCATGACAGTGACCAGGT...CAGAGGGTGAAAAATTACTCCCACGCAGTCAGTAACCATTTCTCTTATTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CCA 90 bp | TTAAAAATAAGAGAAATGGTTACTGACTGCGTGGGAGTAATTTTTCACCCTCTGCTTTCCCTATGTGGCTaGTCTCCAGCTCCACCGTGG | + |
Preference number: 4 (lower is better) Translates to: LKIREMVTDCVGVIFHPLLSLCG*SPAPPW Trigger: CCACGGTGGAGCTGGAGACCAGCCACATAGGGAAAG...CAGAGGGTGAAAAATTACTCCCACGCAGTCAGTAACCATTTCTCTTATTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCCCGCCTGGCTGGAGCTaGCTTGGATCTGCACGCCTC | + |
Preference number: 5 (lower is better) Translates to: PLSAASLEVPGAGVLSLAPPGWS*LGSARL Trigger: GAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGG...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 90 bp | GCCCACAGTCCAGTTGAAGGAGCTACTGGGGGACGGGAGCAGCTCTaGGGTGCCGGCAGCAGCCCCACAGAGCCGGTGAAGGGACTTCTC | + |
Preference number: 5 (lower is better) Translates to: AHSPVEGATGGREQL*GAGSSPTEPVKGLL Trigger: GAGAAGTCCCTTCACCGGCTCTGTGGGGCTGCTGCCGGCACCTCAGAGCTGCTCCCGTCCCCCAGTAGCTCCTTCAACTGGACTGTGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 90 bp | GGTCACTGTCATGGCCGTTGTCGGTGGGGAGGCCCACAGTCCAGTTaGAGGAGCTACTGGGGGACGGGAGCAGCTCTGAGGTGCCGGCAG | + |
Preference number: 5 (lower is better) Translates to: GHCHGRCRWGGPQSS*RSYWGTGAALRCRQ Trigger: CTGCCGGCACCTCAGAGCTGCTCCCGTCCCCCAGTAGCTCCTTCAACTGGACTGTGGGCCTCCCCACCGACAACGGCCATGACAGTGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGGCTCGAGCCATGGCTaGTGCTTGTTAACTCGCGCG | + |
Preference number: 5 (lower is better) Translates to: PLSAASLEVPGAGVLSLAGSSHG*CLLTRA Trigger: CGCGCGAGTTAACAAGCACAAGCCATGGCTCGAGCC...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTATGCTGCTGTGCTGCTaGCCCTCCACCACGGCCGCC | + |
Preference number: 5 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSMLLCC*PSTTAA Trigger: GGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCAT...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGGGCTGCAGGTGGGCTaGACGCTTATCTTCACTAGG | + |
Preference number: 5 (lower is better) Translates to: PLSAASLEVPGAGVLSLAGLQVG*TLIFTR Trigger: CCTAGTGAAGATAAGCGTCAAGCCCACCTGCAGCCC...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCCTGGCTGGAGCTTGCTaGGATCTGCACGCCTCTGTT | + |
Preference number: 5 (lower is better) Translates to: PLSAASLEVPGAGVLSLALAGAC*DLHASV Trigger: AACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAG...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCGCCTGGCTGGAGCTaGCTTGGATCTGCACGCCTC | + |
Preference number: 5 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLPPGWS*LGSARL Trigger: GAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGG...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCAAACCTCCTCGTAGCTaGCCATGGTCTCCACGCCTG | + |
Preference number: 5 (lower is better) Translates to: PLSAASLEVPGAGVLSLAKPPRS*PWSPRL Trigger: CAGGCGTGGAGACCATGGCAAGCTACGAGGAGGTTT...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGCAGGCTCAGTCTCATaGCCACTCTCCACTCCTGAA | + |
Preference number: 5 (lower is better) Translates to: PLSAASLEVPGAGVLSLAAGSVS*PLSTPE Trigger: TTCAGGAGTGGAGAGTGGCAATGAGACTGAGCCTGC...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | GAGCAGTCTGCGTCCACAGCCTCCACCCTGAGGATGCTGCTGTGCTaGTTGCCCTCCACCACGGCCGCCTTGTACGACTTCTCCTTGAAC | + |
Preference number: 5 (lower is better) Translates to: EQSASTASTLRMLLC*LPSTTAALYDFSLN Trigger: GTTCAAGGAGAAGTCGTACAAGGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCATCCTCAGGGTGGAGGCTGTGGACGCAGACTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | GTGAAGACCACACCCAGGTCAGAGTGGCTTGCTTCGATGCCCTTCTaGTGGAGGCGGGTCACGTCTACCTCCAGGCTCTCCTGCTCTGCG | + |
Preference number: 5 (lower is better) Translates to: VKTTPRSEWLASMPF*WRRVTSTSRLSCSA Trigger: CGCAGAGCAGGAGAGCCTGGAGGTAGACGTGACCCGCCTCCAGCAGAAGGGCATCGAAGCAAGCCACTCTGACCTGGGTGTGGTCTTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | CCGTCTGGAATCCTCACGGCCTGCGTGCCGTTGAACTCAAAGACCTaGTCACTGTCATGGCCGTTGTCGGTGGGGAGGCCCACAGTCCAG | + |
Preference number: 5 (lower is better) Translates to: PSGILTACVPLNSKT*SLSWPLSVGRPTVQ Trigger: CTGGACTGTGGGCCTCCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCCAGACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGATGCTGCTGTGCTGCTaGCCCTCCACCACGGCCGCC | + |
Preference number: 5 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQMLLCC*PSTTAA Trigger: GGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCAT...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCCCGAACTGCAGAGAATaGTCTCCTTCTTCCGGCCAA | + |
Preference number: 5 (lower is better) Translates to: PLSAASLEVPGAGVLSLAPNCRE*SPSSGQ Trigger: TTGGCCGGAAGAAGGAGACAATTCTCTGCAGTTCGG...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCGTATGTCTCCATGGGGTaGACGGTGATGGTCAAGGCA | + |
Preference number: 5 (lower is better) Translates to: RSVRLLWRSQVLVSSPWPYVSMG*TVMVKA Trigger: TGCCTTGACCATCACCGTCAACCCCATGGAGACATA...CGGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | CTTCTGCTGGAGGCGGGTCACGTCTACCTCCAGGCTCTCCTGCTCTaGGTTCAGCTCATCCCCTTCCACTGTGACCTCACAGGTGTCCAG | + |
Preference number: 5 (lower is better) Translates to: LLLEAGHVYLQALLL*VQLIPFHCDLTGVQ Trigger: CTGGACACCTGTGAGGTCACAGTGGAAGGGGATGAGCTGAACGCAGAGCAGGAGAGCCTGGAGGTAGACGTGACCCGCCTCCAGCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | ATGCCCTTCTGCTGGAGGCGGGTCACGTCTACCTCCAGGCTCTCCTaGTCTGCGTTCAGCTCATCCCCTTCCACTGTGACCTCACAGGTG | + |
Preference number: 5 (lower is better) Translates to: MPFCWRRVTSTSRLS*SAFSSSPSTVTSQV Trigger: CACCTGTGAGGTCACAGTGGAAGGGGATGAGCTGAACGCAGAGCAGGAGAGCCTGGAGGTAGACGTGACCCGCCTCCAGCAGAAGGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | TCAAGACCGCCTGGCTGGAGCTTGCTTGGATCTGCACGCCTCTGTTaGCATCTTCAGGGACCTGCAGGTCCAGCCCCTCCTTGCAGGTGT | + |
Preference number: 5 (lower is better) Translates to: SRPPGWSLLGSARLC*HLQGPAGPAPPCRC Trigger: ACACCTGCAAGGAGGGGCTGGACCTGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | AAGACCACACCCAGGTCAGAGTGGCTTGCTTCGATGCCCTTCTGCTaGAGGCGGGTCACGTCTACCTCCAGGCTCTCCTGCTCTGCGTTC | + |
Preference number: 5 (lower is better) Translates to: KTTPRSEWLASMPFC*RRVTSTSRLSCSAF Trigger: GAACGCAGAGCAGGAGAGCCTGGAGGTAGACGTGACCCGCCTCCAGCAGAAGGGCATCGAAGCAAGCCACTCTGACCTGGGTGTGGTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTGGGCTGCAGGTGGGCTaGACGCTTATCTTCACTAGG | + |
Preference number: 5 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSGLQVG*TLIFTR Trigger: CCTAGTGAAGATAAGCGTCAAGCCCACCTGCAGCCC...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCATCTGCACGCCTCTGTaGGCATCTTCAGGGACCTGC | + |
Preference number: 5 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLICTPL*ASSGTC Trigger: GCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGAT...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCACGGTGCTGGTGATTTaGAGCCTGCGGATGCCTGGT | + |
Preference number: 5 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLTVLVI*SLRMPG Trigger: ACCAGGCATCCGCAGGCTCAAAATCACCAGCACCGT...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCAGGTCAGAGTGGCTaGCTTCGATGCCCTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLPGQSG*LRCPSA Trigger: AGCAGAAGGGCATCGAAGCAAGCCACTCTGACCTGG...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCAAACCTCCTCGTAGCTaGCCATGGTCTCCACGCCTG | + |
Preference number: 5 (lower is better) Translates to: DKSAQCGFSGGPRCWCPLKPPRS*PWSPRL Trigger: CAGGCGTGGAGACCATGGCAAGCTACGAGGAGGTTT...GAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 90 bp | TGTGCTGCTTGCCCTCCACCACGGCCGCCTTGTACGACTTCTCCTTaGACACGGGGGCGTACTCGTTCACGTCGTTCACCTGGATGTGCA | + |
Preference number: 5 (lower is better) Translates to: CAACPPPRPPCTTSP*TRGRTRSRRSPGCA Trigger: TGCACATCCAGGTGAACGACGTGAACGAGTACGCCCCCGTGTTCAAGGAGAAGTCGTACAAGGCGGCCGTGGTGGAGGGCAAGCAGCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 90 bp | CAAGGGTCACAACGCCGTCTGGAATCCTCACGGCCTGCGTGCCGTTaGACTCAAAGACCTGGTCACTGTCATGGCCGTTGTCGGTGGGGA | + |
Preference number: 5 (lower is better) Translates to: QGSQRRLESSRPACR*TQRPGHCHGRCRWG Trigger: TCCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCCAGACGGCGTTGTGACCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | GCAGGTCGCCACCTGCAGAGGCCATCGTCGCAGGCTCAGTCTCATTaGCACTCTCCACTCCTGAATACTCTTGCCAGCAAGCTCCGACCA | + |
Preference number: 5 (lower is better) Translates to: AGRHLQRPSSQAQSH*HSPLLNTLASKLRP Trigger: TGGTCGGAGCTTGCTGGCAAGAGTATTCAGGAGTGGAGAGTGGCAATGAGACTGAGCCTGCGACGATGGCCTCTGCAGGTGGCGACCTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | CTCACGGCCTGCGTGCCGTTGAACTCAAAGACCTGGTCACTGTCATaGCCGTTGTCGGTGGGGAGGCCCACAGTCCAGTTGAAGGAGCTA | + |
Preference number: 5 (lower is better) Translates to: LTACVPLNSKTWSLS*PLSVGRPTVQLKEL Trigger: TAGCTCCTTCAACTGGACTGTGGGCCTCCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCAGGCCGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | ACGTTGTCTCCCTCCAAGGTCAAGACCGCCTGGCTGGAGCTTGCTTaGATCTGCACGCCTCTGTTGGCATCTTCAGGGACCTGCAGGTCC | + |
Preference number: 5 (lower is better) Translates to: TLSPSKVKTAWLELA*ICTPLLASSGTCRS Trigger: GGACCTGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACAACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | ATACCCTCCGCGCTCTCAAACTCAGAAGCTGCGCGGGCAAAGTGGTaGACGCCACTCAGGCTGATCTTAGGCTCCTCCGGCTGCAAAACC | + |
Preference number: 5 (lower is better) Translates to: IPSALSNSEAARAKW*TPLRLILGSSGCKT Trigger: GGTTTTGCAGCCGGAGGAGCCTAAGATCAGCCTGAGTGGCGTCCACCACTTTGCCCGCGCAGCTTCTGAGTTTGAGAGCGCGGAGGGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CACGGCGGCATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGATCTGCACGCCTCTGTaGGCATCTTCAGGGACCTGC | + |
Preference number: 5 (lower is better) Translates to: HGGILRTSSNSSEDWMSQICTPL*ASSGTC Trigger: GCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGAT...CTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGATGCCGCCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTGCATGTTCCACGGGGTaGGCTGTGTGGATCACATTC | + |
Preference number: 5 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSACSTG*AVWITF Trigger: GAATGTGATCCACACAGCCAACCCCGTGGAACATGC...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 90 bp | CAATTCTGCTGCTCCAGCCTTGCCACCCGGGGCTGCAGGTGGGCTTaGCGCTTATCTTCACTAGGACGTCCTCGGTGGCTCTTTTCTTCC | + |
Preference number: 5 (lower is better) Translates to: QFCCSSLATRGCRWA*RLSSLGRPRWLFSS Trigger: GGAAGAAAAGAGCCACCGAGGACGTCCTAGTGAAGATAAGCGTCAAGCCCACCTGCAGCCCCGGGTGGCAAGGCTGGAGCAGCAGAATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | TCCAACGTTGTCTCCCTCCAAGGTCAAGACCGCCTGGCTGGAGCTTaGTTGGATCTGCACGCCTCTGTTGGCATCTTCAGGGACCTGCAG | + |
Preference number: 5 (lower is better) Translates to: SNVVSLQGQDRLAGA*LDLHASVGIFRDLQ Trigger: CTGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACAACGTTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | CAGGTGTCCAGGTCATGCACAATTTCCTCTGACACCAGGGATTCTTaGACTGTGGGGTCCTCGGACCCATCTGCCTCGGGCTCCACCTCT | + |
Preference number: 5 (lower is better) Translates to: QVSRSCTISSDTRDS*TVGSSDPSASGSTS Trigger: AGAGGTGGAGCCCGAGGCAGATGGGTCCGAGGACCCCACAGTGCAAGAATCCCTGGTGTCAGAGGAAATTGTGCATGACCTGGACACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | CCAGCTCTCCAACGTTGTCTCCCTCCAAGGTCAAGACCGCCTGGCTaGAGCTTGCTTGGATCTGCACGCCTCTGTTGGCATCTTCAGGGA | + |
Preference number: 5 (lower is better) Translates to: PALQRCLPPRSRPPG*SLLGSARLCWHLQG Trigger: TCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACAACGTTGGAGAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | GAAATACCCTCCGCGCTCTCAAACTCAGAAGCTGCGCGGGCAAAGTaGTGGACGCCACTCAGGCTGATCTTAGGCTCCTCCGGCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: EIPSALSNSEAARAK*WTPLRLILGSSGCK Trigger: TTTGCAGCCGGAGGAGCCTAAGATCAGCCTGAGTGGCGTCCACCACTTTGCCCGCGCAGCTTCTGAGTTTGAGAGCGCGGAGGGTATTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GAAACCATGTGGCTGCCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTTGGCCAGGTCAGAGTGGCTaGCTTCGATGCCCTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: ETMWLPVTGVYRKGQGLWPGQSG*LRCPSA Trigger: AGCAGAAGGGCATCGAAGCAAGCCACTCTGACCTGG...CCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGGCAGCCACATGGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GGCTGCCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTTGGCAACATCCTGGCATGTTCCACGGGGTaGGCTGTGTGGATCACATTC | + |
Preference number: 5 (lower is better) Translates to: GCQSQACTGKARGFGNILACSTG*AVWITF Trigger: GAATGTGATCCACACAGCCAACCCCGTGGAACATGC...CAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS GCA 90 bp | AGCCAGGTTACCTCGGAAAAACTGTGTCATGTGCAGGTCGCCACCTaGAGAGGCCATCGTCGCAGGCTCAGTCTCATTGCCACTCTCCAC | + |
Preference number: 5 (lower is better) Translates to: SQVTSEKLCHVQVAT*RGHRRRLSLIATLH Trigger: GTGGAGAGTGGCAATGAGACTGAGCCTGCGACGATGGCCTCTGCAGGTGGCGACCTGCACATGACACAGTTTTTCCGAGGTAACCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | TTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTTCCAAGCGAGGAGCCGGCTCGAGCCATGGCTaGTGCTTGTTAACTCGCGCG | + |
Preference number: 5 (lower is better) Translates to: FGAVVQTCSEPWSSKRGAGSSHG*CLLTRA Trigger: CGCGCGAGTTAACAAGCACAAGCCATGGCTCGAGCC...GGCTCCTCGCTTGGAAGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTCCCTGGCCCAAATCTCACCTTCTTaGGTGACTGTCACCTCAAAA | + |
Preference number: 5 (lower is better) Translates to: PLSAASLEVPGAGVLSLAQISPS*VTVTSK Trigger: TTTTGAGGTGACAGTCACCAAAGAAGGTGAGATTTG...GGCCAGGGAGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039144.7 |
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CDS-3UTR CAA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTGTCCTCATCACAGACTaGGTTCAGCTTCCAGTGGAA | + |
Preference number: 5 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSVLITD*VQLPVE Trigger: TTCCACTGGAAGCTGAACCAAGTCTGTGATGAGGAC...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | ATCCTTCGAACTAGCAGCAACAGCAGCGAGGACTGGATGTCCCAGCTGGAGCAGCTGGCTGGAGCTTGCTaGGATCTGCACGCCTCTGTT | + |
Preference number: 5 (lower is better) Translates to: ILRTSSNSSEDWMSQLEQLAGAC*DLHASV Trigger: AACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAG...CTGCTCCAGCTGGGACATCCAGTCCTCGCTGCTGTTGCTGCTAGTTCGAAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS TCA 90 bp | CCTCCAGGCTCTCCTGCTCTGCGTTCAGCTCATCCCCTTCCACTGTaGCCTCACAGGTGTCCAGGTCATGCACAATTTCCTCTGACACCA | + |
Preference number: 5 (lower is better) Translates to: PPGSPALRSAHPLPL*PHRCPGHAQFPLTP Trigger: TGGTGTCAGAGGAAATTGTGCATGACCTGGACACCTGTGAGGTCACAGTGGAAGGGGATGAGCTGAACGCAGAGCAGGAGAGCCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 90 bp | TCCATCTCATTCTCCTTCCCCGTGTCCTGGTCCCGCATCGTTCGCTaGTGTGCAGCCCGGATCCGAAACACCCCCAGGATGATCATGAAA | + |
Preference number: 5 (lower is better) Translates to: SISFSFPVSWSRIVR*CAARIRNTPRMIMK Trigger: TTTCATGATCATCCTGGGGGTGTTTCGGATCCGGGCTGCACATCAGCGAACGATGCGGGACCAGGACACGGGGAAGGAGAATGAGATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | TCTTTAGGGTCAAGGGTCACAACGCCGTCTGGAATCCTCACGGCCTaGGTGCCGTTGAACTCAAAGACCTGGTCACTGTCATGGCCGTTG | + |
Preference number: 5 (lower is better) Translates to: SLGSRVTTPSGILTA*VPLNSKTWSLSWPL Trigger: CAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCCAGACGGCGTTGTGACCCTTGACCCTAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | CGCCTCTGTTGGCATCTTCAGGGACCTGCAGGTCCAGCCCCTCCTTaGAGGTGTAGAGACAGTCAATCACCTTCTTATCCGCCAGTTTCC | + |
Preference number: 5 (lower is better) Translates to: RLCWHLQGPAGPAPP*RCRDSQSPSYPPVS Trigger: GGAAACTGGCGGATAAGAAGGTGATTGACTGTCTCTACACCTGCAAGGAGGGGCTGGACCTGCAGGTCCCTGAAGATGCCAACAGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | ATCGATGTTCAGGGTGGACGAACTGTGGCTGGGCAGCCATGTGGTTaGCATGTTCCACGGGGTTGGCTGTGTGGATCACATTCACCTCCA | + |
Preference number: 5 (lower is better) Translates to: IDVQGGRTVAGQPCG*HVPRGWLCGSHSPP Trigger: TGGAGGTGAATGTGATCCACACAGCCAACCCCGTGGAACATGCCAACCACATGGCTGCCCAGCCACAGTTCGTCCACCCTGAACATCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | AAGGATCGATGTTCAGGGTGGACGAACTGTGGCTGGGCAGCCATGTaGTTGGCATGTTCCACGGGGTTGGCTGTGTGGATCACATTCACC | + |
Preference number: 5 (lower is better) Translates to: KDRCSGWTNCGWAAM*LACSTGLAVWITFT Trigger: GGTGAATGTGATCCACACAGCCAACCCCGTGGAACATGCCAACCACATGGCTGCCCAGCCACAGTTCGTCCACCCTGAACATCGATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGAGTCCTCATCACAGACTaGGTTCAGCTTCCAGTGGAA | + |
Preference number: 5 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRVLITD*VQLPVE Trigger: TTCCACTGGAAGCTGAACCAAGTCTGTGATGAGGAC...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GTCCCACACACCAAGCACGGGAGGACTTTGAGCAGTGGGGGAAGGGTCTGCAGACTTGGAACTTCCACATaGAGGACAAAGTGGTGCCAG | + |
Preference number: 5 (lower is better) Translates to: VPHTKHGRTLSSGGRVCRLGTST*RTKWCQ Trigger: CTGGCACCACTTTGTCCTCAATGTGGAAGTTCCAAG...TCTGCAGACCCTTCCCCCACTGCTCAAAGTCCTCCCGTGCTTGGTGTGTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | TACAGGAAAGGCCAGGGGCTTTGGCAACATCCTGGCTGTTCCCAGCCTCTAATGACGGTGCTGGTGATTTaGAGCCTGCGGATGCCTGGT | + |
Preference number: 5 (lower is better) Translates to: YRKGQGLWQHPGCSQPLMTVLVI*SLRMPG Trigger: ACCAGGCATCCGCAGGCTCAAAATCACCAGCACCGT...CATTAGAGGCTGGGAACAGCCAGGATGTTGCCAAAGCCCCTGGCCTTTCCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS TCA 90 bp | TTCCACTGTGACCTCACAGGTGTCCAGGTCATGCACAATTTCCTCTaGCACCAGGGATTCTTGCACTGTGGGGTCCTCGGACCCATCTGC | + |
Preference number: 5 (lower is better) Translates to: FHCDLTGVQVMHNFL*HQGFLHCGVLGPIC Trigger: GCAGATGGGTCCGAGGACCCCACAGTGCAAGAATCCCTGGTGTCAGAGGAAATTGTGCATGACCTGGACACCTGTGAGGTCACAGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | TTATCCAGCTCTCCAACGTTGTCTCCCTCCAAGGTCAAGACCGCCTaGCTGGAGCTTGCTTGGATCTGCACGCCTCTGTTGGCATCTTCA | + |
Preference number: 5 (lower is better) Translates to: LSSSPTLSPSKVKTA*LELAWICTPLLASS Trigger: TGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACAACGTTGGAGAGCTGGATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CGACAAGTCCGCTCAGTGCGGCTTCTCTGGAGGTCCCAGGTGCTGGTGTCCTCTAGTCCAGTTTCTCTTTaGACCGGATTATTCCCTCAC | + |
Preference number: 5 (lower is better) Translates to: RQVRSVRLLWRSQVLVSSSPVSL*TGLFPH Trigger: GTGAGGGAATAATCCGGTCAAAAGAGAAACTGGACT...AGAGGACACCAGCACCTGGGACCTCCAGAGAAGCCGCACTGAGCGGACTTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GAAACCATGTGGCTGCCAGTCACAGGCGTGTACAGGAAAGGCCAGGGGCTTTGGGCCTCGTTGAAACACTaGACGGTGCTGGTGATTTTG | + |
Preference number: 5 (lower is better) Translates to: ETMWLPVTGVYRKGQGLWASLKH*TVLVIL Trigger: CAAAATCACCAGCACCGTCAAGTGTTTCAACGAGGC...CCAAAGCCCCTGGCCTTTCCTGTACACGCCTGTGACTGGCAGCCACATGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS GCA 90 bp | TTCAGCTCATCCCCTTCCACTGTGACCTCACAGGTGTCCAGGTCATaGACAATTTCCTCTGACACCAGGGATTCTTGCACTGTGGGGTCC | + |
Preference number: 5 (lower is better) Translates to: FSSSPSTVTSQVSRS*TISSDTRDSCTVGS Trigger: GGACCCCACAGTGCAAGAATCCCTGGTGTCAGAGGAAATTGTGCATGACCTGGACACCTGTGAGGTCACAGTGGAAGGGGATGAGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | GGAGATTGTAAAGGGTTCTTTAGGGTCAAGGGTCACAACGCCGTCTaGAATCCTCACGGCCTGCGTGCCGTTGAACTCAAAGACCTGGTC | + |
Preference number: 5 (lower is better) Translates to: GDCKGFFRVKGHNAV*NPHGLRAVELKDLV Trigger: GACCAGGTCTTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCCAGACGGCGTTGTGACCCTTGACCCTAAAGAACCCTTTACAATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 90 bp | GCTGGTGATTTTGAGCCTGCGGATGCCTGGTGTGGGGAACTGCCTTaGGTTAAGGTAGGAAATGTGCTGCATAGCCTTATCCAGCTCTCC | + |
Preference number: 5 (lower is better) Translates to: AGDFEPADAWCGELP*VKVGNVLHSLIQLS Trigger: GGAGAGCTGGATAAGGCTATGCAGCACATTTCCTACCTTAACTCAAGGCAGTTCCCCACACCAGGCATCCGCAGGCTCAAAATCACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | TCCGAACTGCAGAGAATTGTCTCCTTCTTCCGGCCAAACGGCCCATaGCGCATCCACACGGAGATTGTAAAGGGTTCTTTAGGGTCAAGG | + |
Preference number: 5 (lower is better) Translates to: SELQRIVSFFRPNGP*RIHTEIVKGSLGSR Trigger: CCTTGACCCTAAAGAACCCTTTACAATCTCCGTGTGGATGCGGCATGGGCCGTTTGGCCGGAAGAAGGAGACAATTCTCTGCAGTTCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTGGACTACTAGCACAGAGCCGAACTGCAGAGAATaGTCTCCTTCTTCCGGCCAA | + |
Preference number: 5 (lower is better) Translates to: LLAPHSDFTFLSWTTSTEPNCRE*SPSSGQ Trigger: TTGGCCGGAAGAAGGAGACAATTCTCTGCAGTTCGG...CTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGGCAGGCTCAGTCTCATaGCCACTCTCCACTCCTGAA | + |
Preference number: 5 (lower is better) Translates to: EGSADLLVKMILYIVDPWAGSVS*PLSTPE Trigger: TTCAGGAGTGGAGAGTGGCAATGAGACTGAGCCTGC...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | CTCCTGGCCCCGCATTCTGACTTTACATTCCTGTCCTGGACTACTAGCACAGAGTATGTCTCCATGGGGTaGACGGTGATGGTCAAGGCA | + |
Preference number: 5 (lower is better) Translates to: LLAPHSDFTFLSWTTSTEYVSMG*TVMVKA Trigger: TGCCTTGACCATCACCGTCAACCCCATGGAGACATA...CTCTGTGCTAGTAGTCCAGGACAGGAATGTAAAGTCAGAATGCGGGGCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS TCA 90 bp | GACAGTCAATCACCTTCTTATCCGCCAGTTTCCCAGAACGGACTGTaGGGCCAGCCAGGTTACCTCGGAAAAACTGTGTCATGTGCAGGT | + |
Preference number: 5 (lower is better) Translates to: DSQSPSYPPVSQNGL*GQPGYLGKTVSCAG Trigger: ACCTGCACATGACACAGTTTTTCCGAGGTAACCTGGCTGGCCTCACAGTCCGTTCTGGGAAACTGGCGGATAAGAAGGTGATTGACTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 90 bp | ATTTCTTCTCCTCAGACGGGTCCTGACGGAGGAGGAAAACTAGCCTaGACCCGTGGACGTAGAGCGAATAATGGTGTCGGTTCATATCTG | + |
Preference number: 5 (lower is better) Translates to: ISSPQTGPDGGGKLA*TRGRRANNGVGSYL Trigger: CAGATATGAACCGACACCATTATTCGCTCTACGTCCACGGGTGCAGGCTAGTTTTCCTCCTCCGTCAGGACCCGTCTGAGGAGAAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 90 bp | AGAGAAGGGCTCATGAGGGATGCCGTCCACGTAGAGAGTCACACTTaGAACTTCCACATTGAGGACAAAGTGGTGCCAGTCCTCATCACA | + |
Preference number: 5 (lower is better) Translates to: REGLMRDAVHVESHT*NFHIEDKVVPVLIT Trigger: TGTGATGAGGACTGGCACCACTTTGTCCTCAATGTGGAAGTTCCAAGTGTGACTCTCTACGTGGACGGCATCCCTCATGAGCCCTTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GCCTCGGGGTCTCCTTTTGGTGCTGTTGTGCAGACTTGCTCAGAACCGTGGTCTAGTCCAGTTTCTCTTTaGACCGGATTATTCCCTCAC | + |
Preference number: 5 (lower is better) Translates to: ASGSPFGAVVQTCSEPWSSPVSL*TGLFPH Trigger: GTGAGGGAATAATCCGGTCAAAAGAGAAACTGGACT...AGACCACGGTTCTGAGCAAGTCTGCACAACAGCACCAAAAGGAGACCCCGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS GCA 90 bp | CGTAGAGCGAATAATGGTGTCGGTTCATATCTGTCTTATCCGAACTaGAGAGAATTGTCTCCTTCTTCCGGCCAAACGGCCCATGCCGCA | + |
Preference number: 5 (lower is better) Translates to: RRANNGVGSYLSYPN*RELSPSSGQTAHAA Trigger: TGCGGCATGGGCCGTTTGGCCGGAAGAAGGAGACAATTCTCTGCAGTTCGGATAAGACAGATATGAACCGACACCATTATTCGCTCTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGCTTGGAACTTCCACATaGAGGACAAAGTGGTGCCAG | + |
Preference number: 5 (lower is better) Translates to: EGSADLLVKMILYIVDPWLGTST*RTKWCQ Trigger: CTGGCACCACTTTGTCCTCAATGTGGAAGTTCCAAG...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS-3UTR CAA 90 bp | GAAGGGTCTGCAGACCTGCTGGTCAAAATGATTTTGTACATCGTGGACCCGTGGGCCTCGTTGAAACACTaGACGGTGCTGGTGATTTTG | + |
Preference number: 5 (lower is better) Translates to: EGSADLLVKMILYIVDPWASLKH*TVLVIL Trigger: CAAAATCACCAGCACCGTCAAGTGTTTCAACGAGGC...CCACGGGTCCACGATGTACAAAATCATTTTGACCAGCAGGTCTGCAGACCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 90 bp | GTGGACTTATCCACTACCACGGCATCAAAGGGGACATTCTGCCCGTaGATTTTAAAGCCACAAATCTCACCTGCAAAGCGGAGCGGTGAA | + |
Preference number: 5 (lower is better) Translates to: VDLSTTTASKGTFCP*ILKPQISPAKRSGE Trigger: TTCACCGCTCCGCTTTGCAGGTGAGATTTGTGGCTTTAAAATTCACGGGCAGAATGTCCCCTTTGATGCCGTGGTAGTGGATAAGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS TCA 72 bp | CCAGTTGAAGGAGCTACTGGGGGACGGGAGCAGCTCTaGGGTGCCGGCAGCAGCCCCACAGAGCCGGTGAAG | + |
Preference number: 6 (lower is better) Translates to: PVEGATGGREQL*GAGSSPTEPVK Trigger: CTTCACCGGCTCTGTGGGGCTGCTGCCGGCACCTCAGAGCTGCTCCCGTCCCCCAGTAGCTCCTTCAACTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | CATGGCCGTTGTCGGTGGGGAGGCCCACAGTCCAGTTaGAGGAGCTACTGGGGGACGGGAGCAGCTCTGAGG | + |
Preference number: 6 (lower is better) Translates to: HGRCRWGGPQSS*RSYWGTGAALR Trigger: CCTCAGAGCTGCTCCCGTCCCCCAGTAGCTCCTTCAACTGGACTGTGGGCCTCCCCACCGACAACGGCCATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | GCGTCCACAGCCTCCACCCTGAGGATGCTGCTGTGCTaGTTGCCCTCCACCACGGCCGCCTTGTACGACTTC | + |
Preference number: 6 (lower is better) Translates to: ASTASTLRMLLC*LPSTTAALYDF Trigger: GAAGTCGTACAAGGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCATCCTCAGGGTGGAGGCTGTGGACGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | CAGCCAAAGCACCCGTGCCGGGCTCATACTCAATTCTaGTGCTCCAGCCTTGCCACCCGGGGCTGCAGGTGG | + |
Preference number: 6 (lower is better) Translates to: QPKHPCRAHTQF*CSSLATRGCRW Trigger: CCACCTGCAGCCCCGGGTGGCAAGGCTGGAGCAGCAGAATTGAGTATGAGCCCGGCACGGGTGCTTTGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | TGGTCACTGTCATGGCCGTTGTCGGTGGGGAGGCCCACAGTCCAGTaGAAGGAGCTACTGGGGGACGGGAGCAGCTCTGAGGTGCCGGCA | + |
Preference number: 6 (lower is better) Translates to: WSLSWPLSVGRPTVQ*KELLGDGSSSEVPA Trigger: TGCCGGCACCTCAGAGCTGCTCCCGTCCCCCAGTAGCTCCTTCAACTGGACTGTGGGCCTCCCCACCGACAACGGCCATGACAGTGACCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | TGCTCCAGCCTTGCCACCCGGGGCTGCAGGTGGGCTTaGCGCTTATCTTCACTAGGACGTCCTCGGTGGCTC | + |
Preference number: 6 (lower is better) Translates to: CSSLATRGCRWA*RLSSLGRPRWL Trigger: GAGCCACCGAGGACGTCCTAGTGAAGATAAGCGTCAAGCCCACCTGCAGCCCCGGGTGGCAAGGCTGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | CCCAGGTCAGAGTGGCTTGCTTCGATGCCCTTCTGCTaGAGGCGGGTCACGTCTACCTCCAGGCTCTCCTGC | + |
Preference number: 6 (lower is better) Translates to: PRSEWLASMPFC*RRVTSTSRLSC Trigger: GCAGGAGAGCCTGGAGGTAGACGTGACCCGCCTCCAGCAGAAGGGCATCGAAGCAAGCCACTCTGACCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | GTGGAGTCATCCCATTCCAGCTGTCGGGTGGCATTCTaGCCGTCTCCGGGGCCTCCTTCCTCCTCCTCACTG | + |
Preference number: 6 (lower is better) Translates to: VESSHSSCRVAF*PSPGPPSSSSL Trigger: CAGTGAGGAGGAGGAAGGAGGCCCCGGAGACGGCCAGAATGCCACCCGACAGCTGGAATGGGATGACTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | TCCACAGCCTCCACCCTGAGGATGCTGCTGTGCTGCTaGCCCTCCACCACGGCCGCCTTGTACGACTTCTCC | + |
Preference number: 6 (lower is better) Translates to: STASTLRMLLCC*PSTTAALYDFS Trigger: GGAGAAGTCGTACAAGGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCATCCTCAGGGTGGAGGCTGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | CTGCTCCAGCCTTGCCACCCGGGGCTGCAGGTGGGCTaGACGCTTATCTTCACTAGGACGTCCTCGGTGGCT | + |
Preference number: 6 (lower is better) Translates to: LLQPCHPGLQVG*TLIFTRTSSVA Trigger: AGCCACCGAGGACGTCCTAGTGAAGATAAGCGTCAAGCCCACCTGCAGCCCCGGGTGGCAAGGCTGGAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | TCATGGCCGTTGTCGGTGGGGAGGCCCACAGTCCAGTaGAAGGAGCTACTGGGGGACGGGAGCAGCTCTGAG | + |
Preference number: 6 (lower is better) Translates to: SWPLSVGRPTVQ*KELLGDGSSSE Trigger: CTCAGAGCTGCTCCCGTCCCCCAGTAGCTCCTTCAACTGGACTGTGGGCCTCCCCACCGACAACGGCCATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | CAGTCTGCGTCCACAGCCTCCACCCTGAGGATGCTGCTGTGCTGCTaGCCCTCCACCACGGCCGCCTTGTACGACTTCTCCTTGAACACG | + |
Preference number: 6 (lower is better) Translates to: QSASTASTLRMLLCC*PSTTAALYDFSLNT Trigger: CGTGTTCAAGGAGAAGTCGTACAAGGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCATCCTCAGGGTGGAGGCTGTGGACGCAGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | GTCAAGACCGCCTGGCTGGAGCTTGCTTGGATCTGCACGCCTCTGTaGGCATCTTCAGGGACCTGCAGGTCCAGCCCCTCCTTGCAGGTG | + |
Preference number: 6 (lower is better) Translates to: VKTAWLELAWICTPL*ASSGTCRSSPSLQV Trigger: CACCTGCAAGGAGGGGCTGGACCTGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | CCTTCCACCGGGGGCACCTCGATGCAAGCCGCCTCGTTGAAACACTaGACGGTGCTGGTGATTTTGAGCCTGCGGATGCCTGGTGTGGGG | + |
Preference number: 6 (lower is better) Translates to: PSTGGTSMQAASLKH*TVLVILSLRMPGVG Trigger: CCCCACACCAGGCATCCGCAGGCTCAAAATCACCAGCACCGTCAAGTGTTTCAACGAGGCGGCTTGCATCGAGGTGCCCCCGGTGGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | TGCTGGAGGCGGGTCACGTCTACCTCCAGGCTCTCCTaGTCTGCGTTCAGCTCATCCCCTTCCACTGTGACC | + |
Preference number: 6 (lower is better) Translates to: CWRRVTSTSRLS*SAFSSSPSTVT Trigger: GGTCACAGTGGAAGGGGATGAGCTGAACGCAGAGCAGGAGAGCCTGGAGGTAGACGTGACCCGCCTCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | CACGCCTGTGAAGACCACACCCAGGTCAGAGTGGCTTaGTTCGATGCCCTTCTGCTGGAGGCGGGTCACGTC | + |
Preference number: 6 (lower is better) Translates to: HACEDHTQVRVA*FDALLLEAGHV Trigger: GACGTGACCCGCCTCCAGCAGAAGGGCATCGAAGCAAGCCACTCTGACCTGGGTGTGGTCTTCACAGGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | CTCGGTGACTATCCCATGGTAGGTGGGCTCGAGCCATaGCTTGTGCTTGTTAACTCGCGCGGCCCAGACCCC | + |
Preference number: 6 (lower is better) Translates to: LGDYPMVGGLEP*LVLVNSRGPDP Trigger: GGGGTCTGGGCCGCGCGAGTTAACAAGCACAAGCCATGGCTCGAGCCCACCTACCATGGGATAGTCACCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | TGCACAGAGGCGACAGGCTCGTCACAGGTCTCCAAGTaGATGCTCGGGAAGACAGCCAAAGCACCCGTGCCG | + |
Preference number: 6 (lower is better) Translates to: CTEATGSSQVSK*MLGKTAKAPVP Trigger: CGGCACGGGTGCTTTGGCTGTCTTCCCGAGCATCCACTTGGAGACCTGTGACGAGCCTGTCGCCTCTGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | AGCCTTTCCCTATGTGGCTGGTCTCCAGCTCCACCGTaGCCTGCACAGAGGCGACAGGCTCGTCACAGGTCT | + |
Preference number: 6 (lower is better) Translates to: SLSLCGWSPAPP*PAQRRQARHRS Trigger: AGACCTGTGACGAGCCTGTCGCCTCTGTGCAGGCCACGGTGGAGCTGGAGACCAGCCACATAGGGAAAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | ATCCTCACGGCCTGCGTGCCGTTGAACTCAAAGACCTaGTCACTGTCATGGCCGTTGTCGGTGGGGAGGCCC | + |
Preference number: 6 (lower is better) Translates to: ILTACVPLNSKT*SLSWPLSVGRP Trigger: GGGCCTCCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCAGGCCGTGAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | CCTGGCTGGAGCTTGCTTGGATCTGCACGCCTCTGTTaGCATCTTCAGGGACCTGCAGGTCCAGCCCCTCCT | + |
Preference number: 6 (lower is better) Translates to: PGWSLLGSARLC*HLQGPAGPAPP Trigger: AGGAGGGGCTGGACCTGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | GCGCTCTCAAACTCAGAAGCTGCGCGGGCAAAGTGGTaGACGCCACTCAGGCTGATCTTAGGCTCCTCCGGC | + |
Preference number: 6 (lower is better) Translates to: ALSNSEAARAKW*TPLRLILGSSG Trigger: GCCGGAGGAGCCTAAGATCAGCCTGAGTGGCGTCCACCACTTTGCCCGCGCAGCTTCTGAGTTTGAGAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | ATGCTGCTGTGCTGCTTGCCCTCCACCACGGCCGCCTaGTACGACTTCTCCTTGAACACGGGGGCGTACTCG | + |
Preference number: 6 (lower is better) Translates to: MLLCCLPSTTAA*YDFSLNTGAYS Trigger: CGAGTACGCCCCCGTGTTCAAGGAGAAGTCGTACAAGGCGGCCGTGGTGGAGGGCAAGCAGCACAGCAGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | CTGTGCTGCTTGCCCTCCACCACGGCCGCCTTGTACGACTTCTCCTaGAACACGGGGGCGTACTCGTTCACGTCGTTCACCTGGATGTGC | + |
Preference number: 6 (lower is better) Translates to: LCCLPSTTAALYDFS*NTGAYSFTSFTWMC Trigger: GCACATCCAGGTGAACGACGTGAACGAGTACGCCCCCGTGTTCAAGGAGAAGTCGTACAAGGCGGCCGTGGTGGAGGGCAAGCAGCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | GCCTGCGTGCCGTTGAACTCAAAGACCTGGTCACTGTCATGGCCGTaGTCGGTGGGGAGGCCCACAGTCCAGTTGAAGGAGCTACTGGGG | + |
Preference number: 6 (lower is better) Translates to: ACVPLNSKTWSLSWP*SVGRPTVQLKELLG Trigger: CCCCAGTAGCTCCTTCAACTGGACTGTGGGCCTCCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | GGGGAGGGTCGAGCAGCACCGTGTTATCGTTCTCGGTaGCTATCCCATGGTAGGTGGGCTCGAGCCATGGCT | + |
Preference number: 6 (lower is better) Translates to: GEGRAAPCYRSR*LSHGRWARAMA Trigger: AGCCATGGCTCGAGCCCACCTACCATGGGATAGTCACCGAGAACGATAACACGGTGCTGCTCGACCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | TGCCCTCCACCACGGCCGCCTTGTACGACTTCTCCTTaGACACGGGGGCGTACTCGTTCACGTCGTTCACCT | + |
Preference number: 6 (lower is better) Translates to: CPPPRPPCTTSP*TRGRTRSRRSP Trigger: AGGTGAACGACGTGAACGAGTACGCCCCCGTGTTCAAGGAGAAGTCGTACAAGGCGGCCGTGGTGGAGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | TGTGCACGGTCGCTTTGTGAGACTTTTTCACACCGGTaGCATCGGGGCCCTTCCCGCAGTCGTAGGCCTGGA | + |
Preference number: 6 (lower is better) Translates to: CARSLCETFSHR*HRGPSRSRRPG Trigger: TCCAGGCCTACGACTGCGGGAAGGGCCCCGATGGCACCGGTGTGAAAAAGTCTCACAAAGCGACCGTGCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | AGGCCAGCCAGGTTACCTCGGAAAAACTGTGTCATGTaGAGGTCGCCACCTGCAGAGGCCATCGTCGCAGGC | + |
Preference number: 6 (lower is better) Translates to: RPARLPRKNCVM*RSPPAEAIVAG Trigger: GCCTGCGACGATGGCCTCTGCAGGTGGCGACCTGCACATGACACAGTTTTTCCGAGGTAACCTGGCTGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | CAGGGATTCTTGCACTGTGGGGTCCTCGGACCCATCTaGCTCGGGCTCCACCTCTCTGGTGATGGTGCTGAT | + |
Preference number: 6 (lower is better) Translates to: QGFLHCGVLGPI*LGLHLSGDGAD Trigger: ATCAGCACCATCACCAGAGAGGTGGAGCCCGAGGCAGATGGGTCCGAGGACCCCACAGTGCAAGAATCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | CTTCCCCGTGTCCTGGTCCCGCATCGTTCGCTGATGTaGAGCCCGGATCCGAAACACCCCCAGGATGATCAT | + |
Preference number: 6 (lower is better) Translates to: LPRVLVPHRSLM*SPDPKHPQDDH Trigger: ATGATCATCCTGGGGGTGTTTCGGATCCGGGCTGCACATCAGCGAACGATGCGGGACCAGGACACGGGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | CCCTCCAAGGTCAAGACCGCCTGGCTGGAGCTTGCTTaGATCTGCACGCCTCTGTTGGCATCTTCAGGGACC | + |
Preference number: 6 (lower is better) Translates to: PSKVKTAWLELA*ICTPLLASSGT Trigger: GGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | TCCGCGCTCTCAAACTCAGAAGCTGCGCGGGCAAAGTaGTGGACGCCACTCAGGCTGATCTTAGGCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: SALSNSEAARAK*WTPLRLILGSS Trigger: GGAGGAGCCTAAGATCAGCCTGAGTGGCGTCCACCACTTTGCCCGCGCAGCTTCTGAGTTTGAGAGCGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | TTGCCCTCCACCACGGCCGCCTTGTACGACTTCTCCTaGAACACGGGGGCGTACTCGTTCACGTCGTTCACC | + |
Preference number: 6 (lower is better) Translates to: LPSTTAALYDFS*NTGAYSFTSFT Trigger: GGTGAACGACGTGAACGAGTACGCCCCCGTGTTCAAGGAGAAGTCGTACAAGGCGGCCGTGGTGGAGGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | TCAAGGGTCACAACGCCGTCTGGAATCCTCACGGCCTGCGTGCCGTaGAACTCAAAGACCTGGTCACTGTCATGGCCGTTGTCGGTGGGG | + |
Preference number: 6 (lower is better) Translates to: SRVTTPSGILTACVP*NSKTWSLSWPLSVG Trigger: CCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCCAGACGGCGTTGTGACCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | TGCAGGTCGCCACCTGCAGAGGCCATCGTCGCAGGCTCAGTCTCATaGCCACTCTCCACTCCTGAATACTCTTGCCAGCAAGCTCCGACC | + |
Preference number: 6 (lower is better) Translates to: CRSPPAEAIVAGSVS*PLSTPEYSCQQAPT Trigger: GGTCGGAGCTTGCTGGCAAGAGTATTCAGGAGTGGAGAGTGGCAATGAGACTGAGCCTGCGACGATGGCCTCTGCAGGTGGCGACCTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | AAGGTCAAGACCGCCTGGCTGGAGCTTGCTTGGATCTaGACGCCTCTGTTGGCATCTTCAGGGACCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: KVKTAWLELAWI*TPLLASSGTCR Trigger: CCTGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | GTCTCCCTCCAAGGTCAAGACCGCCTGGCTGGAGCTTaGTTGGATCTGCACGCCTCTGTTGGCATCTTCAGG | + |
Preference number: 6 (lower is better) Translates to: VSLQGQDRLAGA*LDLHASVGIFR Trigger: CCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | TGCGTGCCGTTGAACTCAAAGACCTGGTCACTGTCATaGCCGTTGTCGGTGGGGAGGCCCACAGTCCAGTTG | + |
Preference number: 6 (lower is better) Translates to: CVPLNSKTWSLS*PLSVGRPTVQL Trigger: CAACTGGACTGTGGGCCTCCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | CAGGGTGGACGAACTGTGGCTGGGCAGCCATGTGGTTaGCATGTTCCACGGGGTTGGCTGTGTGGATCACAT | + |
Preference number: 6 (lower is better) Translates to: QGGRTVAGQPCG*HVPRGWLCGSH Trigger: ATGTGATCCACACAGCCAACCCCGTGGAACATGCCAACCACATGGCTGCCCAGCCACAGTTCGTCCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | TGTTCAGGGTGGACGAACTGTGGCTGGGCAGCCATGTaGTTGGCATGTTCCACGGGGTTGGCTGTGTGGATC | + |
Preference number: 6 (lower is better) Translates to: CSGWTNCGWAAM*LACSTGLAVWI Trigger: GATCCACACAGCCAACCCCGTGGAACATGCCAACCACATGGCTGCCCAGCCACAGTTCGTCCACCCTGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | TCCCTCCAAGGTCAAGACCGCCTGGCTGGAGCTTGCTaGGATCTGCACGCCTCTGTTGGCATCTTCAGGGAC | + |
Preference number: 6 (lower is better) Translates to: SLQGQDRLAGAC*DLHASVGIFRD Trigger: GTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | CCTTCCACCGGGGGCACCTCGATGCAAGCCGCCTCGTaGAAACACTTGACGGTGCTGGTGATTTTGAGCCTG | + |
Preference number: 6 (lower is better) Translates to: PSTGGTSMQAAS*KHLTVLVILSL Trigger: CAGGCTCAAAATCACCAGCACCGTCAAGTGTTTCAACGAGGCGGCTTGCATCGAGGTGCCCCCGGTGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | TCAGGGTGGACGAACTGTGGCTGGGCAGCCATGTGGTaGGCATGTTCCACGGGGTTGGCTGTGTGGATCACA | + |
Preference number: 6 (lower is better) Translates to: SGWTNCGWAAMW*ACSTGLAVWIT Trigger: TGTGATCCACACAGCCAACCCCGTGGAACATGCCAACCACATGGCTGCCCAGCCACAGTTCGTCCACCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | AACGTTGTCTCCCTCCAAGGTCAAGACCGCCTGGCTGGAGCTTGCTaGGATCTGCACGCCTCTGTTGGCATCTTCAGGGACCTGCAGGTC | + |
Preference number: 6 (lower is better) Translates to: NVVSLQGQDRLAGAC*DLHASVGIFRDLQV Trigger: GACCTGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACAACGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | CTCCAACGTTGTCTCCCTCCAAGGTCAAGACCGCCTGGCTGGAGCTaGCTTGGATCTGCACGCCTCTGTTGGCATCTTCAGGGACCTGCA | + |
Preference number: 6 (lower is better) Translates to: LQRCLPPRSRPPGWS*LGSARLCWHLQGPA Trigger: TGCAGGTCCCTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACAACGTTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | TCAATTCTGCTGCTCCAGCCTTGCCACCCGGGGCTGCAGGTGGGCTaGACGCTTATCTTCACTAGGACGTCCTCGGTGGCTCTTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: SILLLQPCHPGLQVG*TLIFTRTSSVALFF Trigger: GAAGAAAAGAGCCACCGAGGACGTCCTAGTGAAGATAAGCGTCAAGCCCACCTGCAGCCCCGGGTGGCAAGGCTGGAGCAGCAGAATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | GATCGATGTTCAGGGTGGACGAACTGTGGCTGGGCAGCCATGTGGTaGGCATGTTCCACGGGGTTGGCTGTGTGGATCACATTCACCTCC | + |
Preference number: 6 (lower is better) Translates to: DRCSGWTNCGWAAMW*ACSTGLAVWITFTS Trigger: GGAGGTGAATGTGATCCACACAGCCAACCCCGTGGAACATGCCAACCACATGGCTGCCCAGCCACAGTTCGTCCACCCTGAACATCGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | CCAAGTGGATGCTCGGGAAGACAGCCAAAGCACCCGTaGCGGGCTCATACTCAATTCTGCTGCTCCAGCCTT | + |
Preference number: 6 (lower is better) Translates to: PSGCSGRQPKHP*RAHTQFCCSSL Trigger: AAGGCTGGAGCAGCAGAATTGAGTATGAGCCCGGCACGGGTGCTTTGGCTGTCTTCCCGAGCATCCACTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | CCTCAGACGGGTCCTGACGGAGGAGGAAAACTAGCCTaGACCCGTGGACGTAGAGCGAATAATGGTGTCGGT | + |
Preference number: 6 (lower is better) Translates to: PQTGPDGGGKLA*TRGRRANNGVG Trigger: ACCGACACCATTATTCGCTCTACGTCCACGGGTGCAGGCTAGTTTTCCTCCTCCGTCAGGACCCGTCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | ACCTCGGAAAAACTGTGTCATGTGCAGGTCGCCACCTaGAGAGGCCATCGTCGCAGGCTCAGTCTCATTGCC | + |
Preference number: 6 (lower is better) Translates to: TSEKLCHVQVAT*RGHRRRLSLIA Trigger: GGCAATGAGACTGAGCCTGCGACGATGGCCTCTGCAGGTGGCGACCTGCACATGACACAGTTTTTCCGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | TCCTCCTCCTCCTCCTCTTCCTCCTCCTCACTGCTGTaGTGGTCCTCATATGTCTCCATGGGGTTGACGGTG | + |
Preference number: 6 (lower is better) Translates to: SSSSSSSSSSLL*WSSYVSMGLTV Trigger: CACCGTCAACCCCATGGAGACATATGAGGACCAGCACAGCAGTGAGGAGGAGGAAGAGGAGGAGGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | CAACGTTGTCTCCCTCCAAGGTCAAGACCGCCTGGCTaGAGCTTGCTTGGATCTGCACGCCTCTGTTGGCAT | + |
Preference number: 6 (lower is better) Translates to: QRCLPPRSRPPG*SLLGSARLCWH Trigger: ATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACAACGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | TCTCCAACGTTGTCTCCCTCCAAGGTCAAGACCGCCTaGCTGGAGCTTGCTTGGATCTGCACGCCTCTGTTG | + |
Preference number: 6 (lower is better) Translates to: SPTLSPSKVKTA*LELAWICTPLL Trigger: CAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACAACGTTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | TCGCCGTGCTGGGGACAACTGCAAACGGGTGAGGATTaGCCAGGTTGTGACCAGACAGGTCCACAAAGGATC | + |
Preference number: 6 (lower is better) Translates to: SPCWGQLQTGED*PGCDQTGPQRI Trigger: GATCCTTTGTGGACCTGTCTGGTCACAACCTGGCCAATCCTCACCCGTTTGCAGTTGTCCCCAGCACGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | CCGTTGAACTCAAAGACCTGGTCACTGTCATGGCCGTaGTCGGTGGGGAGGCCCACAGTCCAGTTGAAGGAG | + |
Preference number: 6 (lower is better) Translates to: PLNSKTWSLSWP*SVGRPTVQLKE Trigger: CTCCTTCAACTGGACTGTGGGCCTCCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | TGTCTCCCTCCAAGGTCAAGACCGCCTGGCTGGAGCTaGCTTGGATCTGCACGCCTCTGTTGGCATCTTCAG | + |
Preference number: 6 (lower is better) Translates to: CLPPRSRPPGWS*LGSARLCWHLQ Trigger: CTGAAGATGCCAACAGAGGCGTGCAGATCCAAGCAAGCTCCAGCCAGGCGGTCTTGACCTTGGAGGGAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | GCCGCCTCGTTGAAACACTTGACGGTGCTGGTGATTTaGAGCCTGCGGATGCCTGGTGTGGGGAACTGCCTT | + |
Preference number: 6 (lower is better) Translates to: AASLKHLTVLVI*SLRMPGVGNCL Trigger: AAGGCAGTTCCCCACACCAGGCATCCGCAGGCTCAAAATCACCAGCACCGTCAAGTGTTTCAACGAGGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | GGCTGGGCAGCCATGTGGTTGGCATGTTCCACGGGGTaGGCTGTGTGGATCACATTCACCTCCACCTTGAAC | + |
Preference number: 6 (lower is better) Translates to: GWAAMWLACSTG*AVWITFTSTLN Trigger: GTTCAAGGTGGAGGTGAATGTGATCCACACAGCCAACCCCGTGGAACATGCCAACCACATGGCTGCCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | TCAAGGGTCACAACGCCGTCTGGAATCCTCACGGCCTaGGTGCCGTTGAACTCAAAGACCTGGTCACTGTCA | + |
Preference number: 6 (lower is better) Translates to: SRVTTPSGILTA*VPLNSKTWSLS Trigger: TGACAGTGACCAGGTCTTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCCAGACGGCGTTGTGACCCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | TCCTCCTCCTCCTCTTCCTCCTCCTCACTGCTGTGCTaGTCCTCATATGTCTCCATGGGGTTGACGGTGATG | + |
Preference number: 6 (lower is better) Translates to: SSSSSSSSSLLC*SSYVSMGLTVM Trigger: CATCACCGTCAACCCCATGGAGACATATGAGGACCAGCACAGCAGTGAGGAGGAGGAAGAGGAGGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | CCACCTGCAGAGGCCATCGTCGCAGGCTCAGTCTCATaGCCACTCTCCACTCCTGAATACTCTTGCCAGCAA | + |
Preference number: 6 (lower is better) Translates to: PPAEAIVAGSVS*PLSTPEYSCQQ Trigger: TTGCTGGCAAGAGTATTCAGGAGTGGAGAGTGGCAATGAGACTGAGCCTGCGACGATGGCCTCTGCAGGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | TCGATGCAAGCCGCCTCGTTGAAACACTTGACGGTGCTGGTGATTTaGAGCCTGCGGATGCCTGGTGTGGGGAACTGCCTTGAGTTAAGG | + |
Preference number: 6 (lower is better) Translates to: SMQAASLKHLTVLVI*SLRMPGVGNCLELR Trigger: CCTTAACTCAAGGCAGTTCCCCACACCAGGCATCCGCAGGCTCAAAATCACCAGCACCGTCAAGTGTTTCAACGAGGCGGCTTGCATCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | ACGAACTGTGGCTGGGCAGCCATGTGGTTGGCATGTTCCACGGGGTaGGCTGTGTGGATCACATTCACCTCCACCTTGAACTCATTGCTG | + |
Preference number: 6 (lower is better) Translates to: TNCGWAAMWLACSTG*AVWITFTSTLNSLL Trigger: CAGCAATGAGTTCAAGGTGGAGGTGAATGTGATCCACACAGCCAACCCCGTGGAACATGCCAACCACATGGCTGCCCAGCCACAGTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | GACCTCACAGGTGTCCAGGTCATGCACAATTTCCTCTaGCACCAGGGATTCTTGCACTGTGGGGTCCTCGGA | + |
Preference number: 6 (lower is better) Translates to: DLTGVQVMHNFL*HQGFLHCGVLG Trigger: TCCGAGGACCCCACAGTGCAAGAATCCCTGGTGTCAGAGGAAATTGTGCATGACCTGGACACCTGTGAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | TGGCATCTTCAGGGACCTGCAGGTCCAGCCCCTCCTTaGAGGTGTAGAGACAGTCAATCACCTTCTTATCCG | + |
Preference number: 6 (lower is better) Translates to: WHLQGPAGPAPP*RCRDSQSPSYP Trigger: CGGATAAGAAGGTGATTGACTGTCTCTACACCTGCAAGGAGGGGCTGGACCTGCAGGTCCCTGAAGATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | AAAGGGTTCTTTAGGGTCAAGGGTCACAACGCCGTCTaGAATCCTCACGGCCTGCGTGCCGTTGAACTCAAA | + |
Preference number: 6 (lower is better) Translates to: KGFFRVKGHNAV*NPHGLRAVELK Trigger: TTTGAGTTCAACGGCACGCAGGCCGTGAGGATTCCAGACGGCGTTGTGACCCTTGACCCTAAAGAACCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | TCACCTTCTTATCCGCCAGTTTCCCAGAACGGACTGTaGGGCCAGCCAGGTTACCTCGGAAAAACTGTGTCA | + |
Preference number: 6 (lower is better) Translates to: SPSYPPVSQNGL*GQPGYLGKTVS Trigger: TGACACAGTTTTTCCGAGGTAACCTGGCTGGCCTCACAGTCCGTTCTGGGAAACTGGCGGATAAGAAGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | TCCCCTTCCACTGTGACCTCACAGGTGTCCAGGTCATaGACAATTTCCTCTGACACCAGGGATTCTTGCACT | + |
Preference number: 6 (lower is better) Translates to: SPSTVTSQVSRS*TISSDTRDSCT Trigger: AGTGCAAGAATCCCTGGTGTCAGAGGAAATTGTGCATGACCTGGACACCTGTGAGGTCACAGTGGAAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | GCAAGCTCCGACCACAAGCTGAGTCTCTATTTTGGTTaGATGAAGCGGGTAGTCCTCTGTCACAGAGAAGGG | + |
Preference number: 6 (lower is better) Translates to: ASSDHKLSLYFG*MKRVVLCHREG Trigger: CCCTTCTCTGTGACAGAGGACTACCCGCTTCATCCAACCAAAATAGAGACTCAGCTTGTGGTCGGAGCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | GCCAGCAAGCTCCGACCACAAGCTGAGTCTCTATTTTaGTTGGATGAAGCGGGTAGTCCTCTGTCACAGAGA | + |
Preference number: 6 (lower is better) Translates to: ASKLRPQAESLF*LDEAGSPLSQR Trigger: TCTCTGTGACAGAGGACTACCCGCTTCATCCAACCAAAATAGAGACTCAGCTTGTGGTCGGAGCTTGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | GTCGGTTCATATCTGTCTTATCCGAACTGCAGAGAATaGTCTCCTTCTTCCGGCCAAACGGCCCATGCCGCA | + |
Preference number: 6 (lower is better) Translates to: VGSYLSYPNCRE*SPSSGQTAHAA Trigger: TGCGGCATGGGCCGTTTGGCCGGAAGAAGGAGACAATTCTCTGCAGTTCGGATAAGACAGATATGAACCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 90 bp | AATAATGGTGTCGGTTCATATCTGTCTTATCCGAACTGCAGAGAATaGTCTCCTTCTTCCGGCCAAACGGCCCATGCCGCATCCACACGG | + |
Preference number: 6 (lower is better) Translates to: NNGVGSYLSYPNCRE*SPSSGQTAHAASTR Trigger: CCGTGTGGATGCGGCATGGGCCGTTTGGCCGGAAGAAGGAGACAATTCTCTGCAGTTCGGATAAGACAGATATGAACCGACACCATTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | TTTGAGCCTGCGGATGCCTGGTGTGGGGAACTGCCTTaGGTTAAGGTAGGAAATGTGCTGCATAGCCTTATC | + |
Preference number: 6 (lower is better) Translates to: FEPADAWCGELP*VKVGNVLHSLI Trigger: GATAAGGCTATGCAGCACATTTCCTACCTTAACTCAAGGCAGTTCCCCACACCAGGCATCCGCAGGCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | CAGAGAATTGTCTCCTTCTTCCGGCCAAACGGCCCATaGCGCATCCACACGGAGATTGTAAAGGGTTCTTTA | + |
Preference number: 6 (lower is better) Translates to: QRIVSFFRPNGP*RIHTEIVKGSL Trigger: TAAAGAACCCTTTACAATCTCCGTGTGGATGCGGCATGGGCCGTTTGGCCGGAAGAAGGAGACAATTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | AGCAAGCTCCGACCACAAGCTGAGTCTCTATTTTGGTaGGATGAAGCGGGTAGTCCTCTGTCACAGAGAAGG | + |
Preference number: 6 (lower is better) Translates to: SKLRPQAESLFW*DEAGSPLSQRR Trigger: CCTTCTCTGTGACAGAGGACTACCCGCTTCATCCAACCAAAATAGAGACTCAGCTTGTGGTCGGAGCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | CGTCCACGTAGAGAGTCACACTTGGAACTTCCACATTaGGGACAAAGTGGTGCCAGTCCTCATCACAGACTT | + |
Preference number: 6 (lower is better) Translates to: RPRRESHLELPH*GQSGASPHHRL Trigger: AAGTCTGTGATGAGGACTGGCACCACTTTGTCCTCAATGTGGAAGTTCCAAGTGTGACTCTCTACGTGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS TCA 72 bp | TCCACTACCACGGCATCAAAGGGGACATTCTGCCCGTaGATTTTAAAGCCACAAATCTCACCTGCAAAGCGG | + |
Preference number: 6 (lower is better) Translates to: STTTASKGTFCP*ILKPQISPAKR Trigger: CCGCTTTGCAGGTGAGATTTGTGGCTTTAAAATTCACGGGCAGAATGTCCCCTTTGATGCCGTGGTAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105691.8 |
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CDS GCA 72 bp | GTCACACTTGGAACTTCCACATTGAGGACAAAGTGGTaGCAGTCCTCATCACAGACTTGGTTCAGCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: VTLGTSTLRTKW*QSSSQTWFSFQ Trigger: CTGGAAGCTGAACCAAGTCTGTGATGAGGACTGGCACCACTTTGTCCTCAATGTGGAAGTTCCAAGTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CCA 72 bp | CCAGTTTCTCTTTTGACCGGATTATTCCCTCACCCGTaGACTTATCCACTACCACGGCATCAAAGGGGACAT | + |
Preference number: 6 (lower is better) Translates to: PVSLLTGLFPHP*TYPLPRHQRGH Trigger: ATGTCCCCTTTGATGCCGTGGTAGTGGATAAGTCCACGGGTGAGGGAATAATCCGGTCAAAAGAGAAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS GCA 72 bp | AATAATGGTGTCGGTTCATATCTGTCTTATCCGAACTaGAGAGAATTGTCTCCTTCTTCCGGCCAAACGGCC | + |
Preference number: 6 (lower is better) Translates to: NNGVGSYLSYPN*RELSPSSGQTA Trigger: GGCCGTTTGGCCGGAAGAAGGAGACAATTCTCTGCAGTTCGGATAAGACAGATATGAACCGACACCATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |
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CDS CAA 72 bp | TGTAGTCTTTCTGTAGTTCACAGTCCAGTTTCTCTTTaGACCGGATTATTCCCTCACCCGTGGACTTATCCA | + |
Preference number: 6 (lower is better) Translates to: CSLSVVHSPVSL*TGLFPHPWTYP Trigger: TGGATAAGTCCACGGGTGAGGGAATAATCCGGTCAAAAGAGAAACTGGACTGTGAACTACAGAAAGACTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039144.7 ENSMUST00000105691.8 |