Pregenerated sensors for CLSPN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042489Ensembl transcript IDs: ENSMUST00000048391.15, ENSMUST00000126512.2, ENSMUST00000129795.2, ENSMUST00000147675.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCGTGCTTCTCGGCCTGGTACTGTGTTAAGGGCCGTGTGGCTGTaGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTT | + |
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Preference number: 1 (lower is better) Translates to: VRASRPGTVLRAVWL*EPHPRLAFSAFCNF Trigger: AAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGCCACACGGCCCTTAACACAGTACCAGGCCGAGAAGCACGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR GCA 90 bp | AAGGGCCGTGTGGCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTaGTTTCTGCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: KGRVAVGASSQAGFQ*FLQFSIMPHFLLPL Trigger: CAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGCCACACGGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR GCA 90 bp | CCAACTTCTCACGCTCAGCTTTCGACACTGAAGCCAACGTTCACCTaGCATGGTTTTTGCAAAGCAGCACTGAATTCTGCTCTGATAGAA | + |
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Preference number: 1 (lower is better) Translates to: PTSHAQLSTLKPTFT*HGFCKAALNSALIE Trigger: TTCTATCAGAGCAGAATTCAGTGCTGCTTTGCAAAAACCATGGCAGGTGAACGTTGGCTTCAGTGTCGAAAGCTGAGCGTGAGAAGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR CCA 90 bp | TTCTCACGCTCAGCTTTCGACACTGAAGCCAACGTTCACCTGCCATaGTTTTTGCAAAGCAGCACTGAATTCTGCTCTGATAGAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: FSRSAFDTEANVHLP*FLQSSTEFCSDRRE Trigger: TTCTCTTCTATCAGAGCAGAATTCAGTGCTGCTTTGCAAAAACCATGGCAGGTGAACGTTGGCTTCAGTGTCGAAAGCTGAGCGTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR GCA 90 bp | CACCTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTaGTTTATGTCTCTCAATAAAGGACGGACACAACCTCATCCAACT | + |
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Preference number: 1 (lower is better) Translates to: HLTENLHLNLISRTG*FMSLNKGRTQPHPT Trigger: AGTTGGATGAGGTTGTGTCCGTCCTTTATTGAGAGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR TCA 90 bp | TTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTaGAAGTGGTGTCAACCCAGGAAATCTGAGTACTTTCCACAGACA | + |
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Preference number: 1 (lower is better) Translates to: FSIMPHFLLPLNTLT*KWCQPRKSEYFPQT Trigger: TGTCTGTGGAAAGTACTCAGATTTCCTGGGTTGACACCACTTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR CAA 90 bp | CGCTCAGCTTTCGACACTGAAGCCAACGTTCACCTGCCATGGTTTTaGCAAAGCAGCACTGAATTCTGCTCTGATAGAAGAGAACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSAFDTEANVHLPWF*QSSTEFCSDRRELA Trigger: GGCCAGTTCTCTTCTATCAGAGCAGAATTCAGTGCTGCTTTGCAAAAACCATGGCAGGTGAACGTTGGCTTCAGTGTCGAAAGCTGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATACTGAACACCTTGACTTaGAAGTGGTGTCAACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AVGASSQAGFQCFLQFSILNTLT*KWCQPR Trigger: CCTGGGTTGACACCACTTTCAAGTCAAGGTGTTCAG...TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR-3UTR CCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAAGGGCCGTGTGGCTGTaGGAGCCTCATCCCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AMKVNQRSRLEVYMTQKERAVWL*EPHPRL Trigger: CAGCCTGGGATGAGGCTCCCACAGCCACACGGCCCT...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR-3UTR CCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTGTGTTAAGGGCCGTGTaGCTGTGGGAGCCTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: LTENLHLNLISRTGCFMSVLRAV*LWEPHP Trigger: GGGATGAGGCTCCCACAGCCACACGGCCCTTAACAC...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR-3UTR GCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGCTGGCTTTCAGTaGTTTCTGCAATTTTCTATA | + |
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Preference number: 2 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEQAGFQ*FLQFSI Trigger: TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTG...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR CCA 72 bp | AGGACGATGCAACAGCTGGGTGCGTGCTTCTCGGCCTaGTACTGTGTTAAGGGCCGTGTGGCTGTGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: RTMQQLGACFSA*YCVKGRVAVGA Trigger: GGCTCCCACAGCCACACGGCCCTTAACACAGTACCAGGCCGAGAAGCACGCACCCAGCTGTTGCATCGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR TCA 72 bp | CACCTTGACTTGAAAGTGGTGTCAACCCAGGAAATCTaGGTACTTTCCACAGACACTGGCATCCTGGATGGC | + |
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Preference number: 3 (lower is better) Translates to: HLDLKVVSTQEI*VLSTDTGILDG Trigger: GCCATCCAGGATGCCAGTGTCTGTGGAAAGTACTCAGATTTCCTGGGTTGACACCACTTTCAAGTCAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR TCA 72 bp | AGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTaGAACTCTAGTCCTGGGGAAGGTGCAGAAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RREGGSGTNALS*NSSPGEGAERE Trigger: CTCCCTTTCTGCACCTTCCCCAGGACTAGAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR GCA 72 bp | CACGCTCAGCTTTCGACACTGAAGCCAACGTTCACCTaGCATGGTTTTTGCAAAGCAGCACTGAATTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: HAQLSTLKPTFT*HGFCKAALNSA Trigger: AGCAGAATTCAGTGCTGCTTTGCAAAAACCATGGCAGGTGAACGTTGGCTTCAGTGTCGAAAGCTGAGCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR CCA 72 bp | TCAGCTTTCGACACTGAAGCCAACGTTCACCTGCCATaGTTTTTGCAAAGCAGCACTGAATTCTGCTCTGAT | + |
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Preference number: 3 (lower is better) Translates to: SAFDTEANVHLP*FLQSSTEFCSD Trigger: ATCAGAGCAGAATTCAGTGCTGCTTTGCAAAAACCATGGCAGGTGAACGTTGGCTTCAGTGTCGAAAGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR GCA 72 bp | CACCTGCCATGGTTTTTGCAAAGCAGCACTGAATTCTaGTCTGATAGAAGAGAACTGGCCTATGTTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: HLPWFLQSSTEF*SDRRELAYVSE Trigger: TTCAGAAACATAGGCCAGTTCTCTTCTATCAGAGCAGAATTCAGTGCTGCTTTGCAAAAACCATGGCAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR-3UTR CAA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAATCTGAACACCTTGACTaGAAAGTGGTGTCAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: AMKVNQRSRLEVYMTQKESEHLD*KVVSTQ Trigger: CTGGGTTGACACCACTTTCAAGTCAAGGTGTTCAGA...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR-3UTR CAA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTCACCTGCCATGGTTTTaGCAAAGCAGCACTGAATTC | + |
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Preference number: 3 (lower is better) Translates to: LTENLHLNLISRTGCFMSHLPWF*QSSTEF Trigger: GAATTCAGTGCTGCTTTGCAAAAACCATGGCAGGTG...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| 3UTR GCA 72 bp | GAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTaGTTTATGTCTCTCAATAAAGGACGGACACAACCT | + |
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Preference number: 3 (lower is better) Translates to: ENLHLNLISRTG*FMSLNKGRTQP Trigger: AGGTTGTGTCCGTCCTTTATTGAGAGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR GCA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTGCAGGGCCATGGCACTaGCCTGGCACGTGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFAGPWH*PGTWAG Trigger: CCCGGCCCACGTGCCAGGGCAGTGCCATGGCCCTGC...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCGCCATGGCACTGCCCTaGCACGTGGGCCGGGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLAMALP*HVGRGL Trigger: TAAGCCCCGGCCCACGTGCCAGGGCAGTGCCATGGC...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | GCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAACTTCAGCAGGGCCATaGCACTGCCCTGGCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: AVGASSQAGFQCFLQFSITSAGP*HCPGTW Trigger: CCACGTGCCAGGGCAGTGCCATGGCCCTGCTGAAGT...TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR TCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTGCTCTCCTTCTCCTaGCTCCTCAGCCCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATLLSFS*LLSPSG Trigger: CCCACTGGGGCTGAGGAGTCAGGAGAAGGAGAGCAG...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTACTCCTCAGCCCCAGTaGGGCCACCGGGGAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFTPQPQ*GHRGGI Trigger: GATGCCTCCCCGGTGGCCCCACTGGGGCTGAGGAGT...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR GCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACGTCACTACTGCCACTaGCGCTGCTGCTGCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATRHYCH*RCCCRL Trigger: CAGTCTGCAGCAGCAGCGGCAGTGGCAGTAGTGACG...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | GCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAACAGAGTGTCCTGTCTaGTGGCCTGGCTCCAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: AVGASSQAGFQCFLQFSITECPV*WPGSKE Trigger: TTCCTTGGAGCCAGGCCACCAGACAGGACACTCTGT...TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR GCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCTGGCTTTGCGTGGCTTaGTCCCTCCAGCTTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLWLCVA*SLQLLC Trigger: GCAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCA...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR TCA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATGGGGAGCGCTGGGGTTaGGGTCAGACAGGGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDGERWG*GQTGQQ Trigger: TTGCTGCCCTGTCTGACCTCAACCCCAGCGCTCCCC...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR GCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAACGCCGCCGTCACTACTaGCACTGCCGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKRRRHY*HCRCCC Trigger: GCAGCAGCAGCGGCAGTGGCAGTAGTGACGGCGGCG...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | GCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAGCTGCTGCTGCAGACTaGGTTTTCTGTTCAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: AVGASSQAGFQCFLQFSIAAAAD*VFCSGI Trigger: AATGCCTGAACAGAAAACCCAGTCTGCAGCAGCAGC...TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCGCAGCTCGTCCATGTTaGCGTCCATGGCATTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLAARPC*RPWHSR Trigger: ACGAGAATGCCATGGACGCCAACATGGACGAGCTGC...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR TCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCCCTCAGCTCCTTCTCTaGGGAGTGTTTTGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLPQLLL*GVFWRA Trigger: AGCTCTCCAAAACACTCCTCAGAGAAGGAGCTGAGG...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR GCA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTTGCCACTGCCGCTGCTaGTGCAGACTGGGTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFCHCRC*CRLGFL Trigger: CAGAAAACCCAGTCTGCAGCAGCAGCGGCAGTGGCA...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACATGTCAGCCAGGGCTTTaGGAAAGCTTCTGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATCQPGL*ESFCSD Trigger: GTCAGAGCAGAAGCTTTCCCAAAGCCCTGGCTGACA...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTGAGTGTCCTGTCTGGTaGCCTGGCTCCAAGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFECPVW*PGSKEG Trigger: TCCTTCCTTGGAGCCAGGCCACCAGACAGGACACTC...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCAAGTGTCTTAGGCTCTaGGGAGGCGGTGTACAGATC | + |
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Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLKCLRL*GGGVQI Trigger: GATCTGTACACCGCCTCCCCAGAGCCTAAGACACTT...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAGTTCCTTCCTCCACTTaGCTTCGGTCTCGTCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATVPSST*LRSRQA Trigger: AGCTTGACGAGACCGAAGCCAAGTGGAGGAAGGAAC...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR CCA 90 bp | GCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATATTGCTGCCTCTGCCTTaGTGGGAGAAAGTGTATGAA | + |
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Preference number: 4 (lower is better) Translates to: AVGASSQAGFQCFLQFSILLPLP*WEKVYE Trigger: TTCATACACTTTCTCCCACCAAGGCAGAGGCAGCAA...TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTCCCACAAGCCTCATCTaGTCCAGCAGTGATCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSPTSLI*SSSDPG Trigger: GCCGGGATCACTGCTGGATCAGATGAGGCTTGTGGG...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR TCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCATCCTCTACGGGAAGTaGAGGCTCAGACAGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLILYGK*RLRQFS Trigger: GGAAAACTGTCTGAGCCTTCACTTCCCGTAGAGGAT...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR TCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCCCCCTTCTTCTGACCTaGGGCTTAGATGAGTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLPLLLT*GLDESF Trigger: AAAGGACTCATCTAAGCCTCAGGTCAGAAGAAGGGG...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR GCA 90 bp | GCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATACTTTGGGAAAGCTTCTaGTCTGACTCTTCCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: AVGASSQAGFQCFLQFSILWESF*SDSSLN Trigger: ATTCAGGGAAGAGTCAGAGCAGAAGCTTTCCCAAAG...TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR GCA 90 bp | GCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATACAATCAGCTCAAAGCTaGTATTGTGACTGCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: AVGASSQAGFQCFLQFSIQSAQS*YCDCSP Trigger: AGGAGAGCAGTCACAATAGCAGCTTTGAGCTGATTG...TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR GCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAGGAGCAAAGAGCAAGTaGCTCTTCCATCGGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATGAKSK*LFHRIF Trigger: GAAGATCCGATGGAAGAGGCACTTGCTCTTTGCTCC...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR TCA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTGAATGTAAGTTCTCCTaGGTGTCCTCTGCGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFECKFS*VSSALS Trigger: CGACAGCGCAGAGGACACTCAGGAGAACTTACATTC...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS-3UTR TCA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATGTGAGGTCTCCAGCCTaGTGCCCCTCATTGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDVRSPA*CPSLSS Trigger: CGAAGACAATGAGGGGCATCAGGCTGGAGACCTCAC...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAACTCCTGAGTGTCCTCTaGGCTGTCGTCGTAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKLLSVL*AVVVGG Trigger: CCCACCTACGACGACAGCGCAGAGGACACTCAGGAG...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAATTAAGCGGCCGGTCTaGATCACTTTCCTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATIKRPV*ITFLTS Trigger: AGATGTGAGGAAAGTGATGCAGACCGGCCGCTTAAT...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAGACGGGTACCACTTCTaGCTTCAGCTCCTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEDGYHF*LQLLLP Trigger: GGGAAGGAGGAGCTGAAGGCAGAAGTGGTACCCGTC...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATAATGCTTGGCGCTTCTaGCGCTCCTCAAGCCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDNAWRF*RSSSLR Trigger: CCGAAGGCTTGAGGAGCGGCAGAAGCGCCAAGCATT...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACATCTCCAGCCGTCTCTTaGATTTTGCTTTTCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATSPAVS*ILLFPQ Trigger: CTGAGGGAAAAGCAAAATCCAAGAGACGGCTGGAGA...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAAGTCCATGCTGGCCAGTaGCAACTGGGGCTTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKVHAGQ*QLGLHS Trigger: GCTGTGAAGCCCCAGTTGCCACTGGCCAGCATGGAC...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAACCGGGGAGGCATCTTaGGTAGGAAATTTGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKETGEAS*VGNLPE Trigger: CTCGGGCAAATTTCCTACTCAAGATGCCTCCCCGGT...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTGACCTGAGGCTTAGATaGGTCCTTTGCTGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSDLRLR*VLCCLC Trigger: GCAGAGGCAGCAAAGGACTCATCTAAGCCTCAGGTC...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTTCTGCTCAGAACCTCTaGTGGAGTCCTCAGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSSAQNL*WSPQHP Trigger: TGGGTGCTGAGGACTCCAGCAGAGGTTCTGAGCAGA...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTCACTGCCGCTGCTGCTaGAGACTGGGTTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSHCRCC*RLGFLF Trigger: GAACAGAAAACCCAGTCTGCAGCAGCAGCGGCAGTG...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAGCTGCTGGGTTAGCGTaGCTCCAGAAACGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEAAGLA*LQKRCF Trigger: GAAGCAACGTTTCTGGAGGCACGCTAACCCAGCAGC...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCAGCTGCTATTGTGACTaGTCTCCTTTGTTAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLSCYCD*SPLLAV Trigger: CACTGCTAACAAAGGAGAGCAGTCACAATAGCAGCT...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTTGTTCCCGAAGCCACTaGTCTCGCTCAATCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSCSRSH*SRSIRS Trigger: GGAACGGATTGAGCGAGAGCAGTGGCTTCGGGAACA...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAGGCATTCTTCTGCAGTaGTTTGGCTGTGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATGILLQ*FGCDFL Trigger: AAGAAAGTCACAGCCAAAGCACTGCAGAAGAATGCC...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATCTGAAGAGAGAGGCTTaGGGACACAGAGGGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDLKREA*GHRGQQ Trigger: CTGTTGCCCTCTGTGTCCCCAAGCCTCTCTCTTCAG...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAGCAAGGCTGATAGGATaGAATTGTGGAACCAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATARLIG*NCGTNQ Trigger: CTGATTGGTTCCACAATTCCATCCTATCAGCCTTGC...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACAACCACAGTATGACTaGCATTCTTCTGCAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATQPQYD*HSSAVL Trigger: AAGCACTGCAGAAGAATGCCAGTCATACTGTGGTTG...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAAGCACAGCTTTGGGCTaGTTTAGCAGGGAGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKESTALG*FSREPV Trigger: GACAGGCTCCCTGCTAAACCAGCCCAAAGCTGTGCT...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| 3UTR CAA 72 bp | TTCGACACTGAAGCCAACGTTCACCTGCCATGGTTTTaGCAAAGCAGCACTGAATTCTGCTCTGATAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FDTEANVHLPWF*QSSTEFCSDRR Trigger: TCTTCTATCAGAGCAGAATTCAGTGCTGCTTTGCAAAAACCATGGCAGGTGAACGTTGGCTTCAGTGTCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTGCAAGGTACCTCTCTTaGTATAACCGTAGTCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSARYLS*YNRSRR Trigger: GCGGCGACTACGGTTATATCAAGAGAGGTACCTTGC...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTAAAGACAAAGTTCCTTaGGTTTCGGGGAGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSKDKVP*VSGSAG Trigger: CCCAGCGCTCCCCGAAACTCAAGGAACTTTGTCTTT...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAGTGGGAGAAAGTGTATaGAAGACAAAGTTCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATVGESV*KTKFLE Trigger: CTCAAGGAACTTTGTCTTTCATACACTTTCTCCCAC...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAATCCCTCCAGCTTCTCTaGTGCCAAAGTGACGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKSLQLL*CQSDGY Trigger: GTACCCGTCACTTTGGCAGCAGAGAAGCTGGAGGGA...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAACACTTCCCACGTCACTaGCTGACACCTCTGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKHFPRH*LTPLPH Trigger: ATGAGGCAGAGGTGTCAGGCAGTGACGTGGGAAGTG...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCCTCACTCTCCAGAGTTaGTTCCTTTTTCTTGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLLTLQS*FLFLAI Trigger: AATCGCAAGAAAAAGGAACCAACTCTGGAGAGTGAG...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAAATTTAAATAATGCTTaGCGCTTCTGCCGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATNLNNA*RFCRSS Trigger: TGAGGAGCGGCAGAAGCGCCAAGCATTATTTAAATT...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATGCGGTGTACAGATCCTaGGAATCCTCTACGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDAVYRS*ESSTGS Trigger: ACTTCCCGTAGAGGATTCCCAGGATCTGTACACCGC...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACATCCTTTGAAACAAGCTaGAAGTCTCCAAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATSFETS*KSPNSS Trigger: GGAGGAATTTGGAGACTTCCAGCTTGTTTCAAAGGA...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACATTCTTCAGTCTCATTTaGCGCTTCATCTTCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLIPGWLSVLSAIFYNATFFSLI*RFIFSD Trigger: GTCTGAGAAGATGAAGCGCCAAATGAGACTGAAGAA...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAATTTGGAGCACAGCTTTaGGCTGGTTTAGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEFGAQL*AGLAGS Trigger: GCTCCCTGCTAAACCAGCCCAAAGCTGTGCTCCAAA...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATGATCCCGGCTTCTTCTaGGACCTCAGAGAGAACATT | + |
|
Preference number: 4 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDDPGFF*DLRENI Trigger: AATGTTCTCTCTGAGGTCTCAGAAGAAGCCGGGATC...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTTCATGTGTATCTTCTTaGTCTGACTCTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFSCVSS*SDSPAP Trigger: AGGAGCTGGAGAGTCAGATCAAGAAGATACACATGA...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTAGCTGTTCTTCAACCTaGTCGTCATCGGAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSSCSST*SSSESL Trigger: CAGAGACTCCGATGACGATCAGGTTGAAGAACAGCT...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCAGTTTCATTGCCTCCTaGAACTTAGCTTTCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLSFIAS*NLAFNI Trigger: GATGTTGAAAGCTAAGTTGCAGGAGGCAATGAAACT...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTTCCTCGCACTGCCTTTaGATAACTCATTTCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFSSHCL*ITHFRL Trigger: AAGACGGAAATGAGTTATCCAAAGGCAGTGCGAGGA...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAACTTCGATCCTGGGGATaGAGGATTCCTGCTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKLRSWG*RIPAVT Trigger: TGTCACAGCAGGAATCCTCCATCCCCAGGATCGAAG...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAAGCTTCGCTTTGGCCCTaGACTGCTTCCGTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKASLWP*TASVCL Trigger: AAGACAAACGGAAGCAGTCCAGGGCCAAAGCGAAGC...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAGGAAAGCTTCTGCTCTaGCTCTTCCCTGAATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEGKLLL*LFPECK Trigger: CTTACATTCAGGGAAGAGTCAGAGCAGAAGCTTTCC...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTTCCAACAGTTGGCTCTaGGTGTCATCTTCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSSNSWL*VSSSKQ Trigger: CTGTTTGGAAGATGACACTCAGAGCCAACTGTTGGA...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTCATTTCTCCTCAGGCTaGGATGTAAACTGTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSHFSSG*DVNCPV Trigger: CACTGGACAGTTTACATCTCAGCCTGAGGAGAAATG...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAATCATCGGAGTCTCTGTaGAATAGATCCATCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKESSESL*NRSIWE Trigger: CTCCCAGATGGATCTATTTCACAGAGACTCCGATGA...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAAGAGCACCTCCTGGTCTaGTGGTTTCAAAAGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKEHLLV*WFQKGF Trigger: GAAACCCTTTTGAAACCATCAGACCAGGAGGTGCTC...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATGGCCTATCTGTCTGTTaGAAGGCTGATAGGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDGLSVC*KADRME Trigger: TTCCATCCTATCAGCCTTGCAACAGACAGATAGGCC...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAATCTTCCAAACAGAACTaGAAGTCTCCTGCTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKESSKQN*KSPAPR Trigger: CCTAGGAGCAGGAGACTTCCAGTTCTGTTTGGAAGA...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTGAAGCACCTCATCAATaGCGTCCTCTTCGTATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSEAPHQ*RPLRIH Trigger: ATGAATACGAAGAGGACGTCATTGATGAGGTGCTTC...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAATGTATCTTCTTGATCTaGCTCTCCAGCTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKECIFLI*LSSSSS Trigger: TGATGAGGAGCTGGAGAGTCAGATCAAGAAGATACA...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAAAGCTTTCCAAGTATCTaGAGATGCTTCGCTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKSFPSI*RCFALA Trigger: GGCCAAAGCGAAGCATCTTCAGATACTTGGAAAGCT...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAACCGTCTCTTGGATTTTaGTTTTCCCTCAGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKPSLGF*FSLSSF Trigger: GAAGGAGCTGAGGGAAAAGCAAAATCCAAGAGACGG...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAGGTCTGTCATCACTGTaGTTCTCAGTCTCCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEGLSSL*FSVSSI Trigger: AATTGAGGAGACTGAGAAGCACAGTGATGACAGACC...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAAATTCCTGCTGTGACATaGATCTGTCCCCAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKIPAVT*ICPQEN Trigger: ATTCTCCTGGGGACAGATCCATGTCACAGCAGGAAT...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAACTGCCTCTGCCTTGGTaGGAGAAAGTGTATGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKLPLPW*EKVYER Trigger: TCTTTCATACACTTTCTCCCACCAAGGCAGAGGCAG...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAAAATCCATTCTCCTTTaGAACAAGCTGGAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEKSILL*NKLEVS Trigger: GGAGACTTCCAGCTTGTTTCAAAGGAGAATGGATTT...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAATGCCTCCAGAAACGTTaGTTCAAGGCTTCCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIFYNATLSSSSEHLDLKCLQKR*FKASNS Trigger: AGAATTGGAAGCCTTGAAGCAACGTTTCTGGAGGCA...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTGATAGGATGGAATTGTaGAACCAATCAGCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSDRMEL*NQSAQS Trigger: GCTTTGAGCTGATTGGTTCCACAATTCCATCCTATC...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAGTTTGTCAGACTGCTTaGCCAAGTATTCATCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEVCQTA*PSIHLF Trigger: AAACAGATGAATACTTGGCCAAGCAGTCTGACAAAC...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAATTTGTCATTCTTCCTTaGTTGACATTTCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEFVILP*LTFLLR Trigger: CCTGAGGAGAAATGTCAACCAAGGAAGAATGACAAA...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR TCA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTTTACTCTCAGGCATATaGTATGGAAGATTAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTENLHLNLISRTGCFMSLLSGI*YGRLSA Trigger: TGCACTTAATCTTCCATATCATATGCCTGAGAGTAA...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR GCA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATTTAGCTTTCAACATCTaGAGTTTTTCACCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDLAFNI*SFSPGF Trigger: AAAGCCAGGTGAAAAACTGCAGATGTTGAAAGCTAA...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CCA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACTCAGGCATATGATATaGAAGATTAAGTGCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: AMKVNQRSRLEVYMTQKELRHMI*KIKCRF Trigger: GAATCTGCACTTAATCTTCCATATCATATGCCTGAG...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 90 bp | TTCAGGTGGCGCCGCCGCCGCCGTCACTACTGCCACTGCCGCTGCTaGTGCAGACTGGGTTTTCTGTTCAGGCATTCCCTCTTTTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FRWRRRRRHYCHCRC*CRLGFLFRHSLFCV Trigger: GACGCAAAAGAGGGAATGCCTGAACAGAAAACCCAGTCTGCAGCAGCAGCGGCAGTGGCAGTAGTGACGGCGGCGGCGGCGCCACCTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS TCA 90 bp | TGCAGGGTTTACGGTTTCCTTGTAATGGCCCGACTGATACTTACATaGCTTCAGCAGGGCCATGGCACTGCCCTGGCACGTGGGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRVYGFLVMARLILT*LQQGHGTALARGPG Trigger: CCCCGGCCCACGTGCCAGGGCAGTGCCATGGCCCTGCTGAAGTCATGTAAGTATCAGTCGGGCCATTACAAGGAAACCGTAAACCCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS GCA 90 bp | TGCTCCCTCCAGCTTCTCTGCTGCCAAAGTGACGGGTACCACTTCTaGCTTCAGCTCCTCCTTCCCGTTAGTGCCCAAGTCCTTCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: CSLQLLCCQSDGYHF*LQLLLPVSAQVLHD Trigger: ATCGTGAAGGACTTGGGCACTAACGGGAAGGAGGAGCTGAAGGCAGAAGTGGTACCCGTCACTTTGGCAGCAGAGAAGCTGGAGGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS GCA 90 bp | TTTTTCACCTGGCTTTGCGTGGCTTGCTCCCTCCAGCTTCTCTGCTaGCAAAGTGACGGGTACCACTTCTGCCTTCAGCTCCTCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FFTWLCVACSLQLLC*QSDGYHFCLQLLLP Trigger: GGGAAGGAGGAGCTGAAGGCAGAAGTGGTACCCGTCACTTTGGCAGCAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCAGGTGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS CCA 90 bp | CTCGTCCATGTTGGCGTCCATGGCATTCTCGTCCATGCTGGCCAGTaGCAACTGGGGCTTCACAGCCTGATATCGATGGCGGTGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVHVGVHGILVHAGQ*QLGLHSLISMAVIS Trigger: AGAAATCACCGCCATCGATATCAGGCTGTGAAGCCCCAGTTGCCACTGGCCAGCATGGACGAGAATGCCATGGACGCCAACATGGACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS GCA 90 bp | CACGATGATGTTCACGTTCACCGTCTGACAAGCCCTGGGACTGGCTaGTGGGTTAGCGTGCCTCCAGAAACGTTGCTTCAAGGCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HDDVHVHRLTSPGTG*WVSVPPETLLQGFQ Trigger: TTGGAAGCCTTGAAGCAACGTTTCTGGAGGCACGCTAACCCAGCAGCCAGTCCCAGGGCTTGTCAGACGGTGAACGTGAACATCATCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS GCA 90 bp | CAGTTTTTCACCTGGCTTTGCGTGGCTTGCTCCCTCCAGCTTCTCTaGTGCCAAAGTGACGGGTACCACTTCTGCCTTCAGCTCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QFFTWLCVACSLQLL*CQSDGYHFCLQLLL Trigger: AAGGAGGAGCTGAAGGCAGAAGTGGTACCCGTCACTTTGGCAGCAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCAGGTGAAAAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS GCA 90 bp | CAGCCCAGGGGACGGCGATCTGAATCCTGCTGTAGGGAGAAAACTTaGCCCACGGCCTATCTGTCTGTTGCAAGGCTGATAGGATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QPRGRRSESCCREKT*PTAYLSVARLIGWN Trigger: ATTCCATCCTATCAGCCTTGCAACAGACAGATAGGCCGTGGGGCAAGTTTTCTCCCTACAGCAGGATTCAGATCGCCGTCCCCTGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS CCA 90 bp | GTTCCCGAAGCCACTGCTCTCGCTCAATCCGTTCCTTCCTCCACTTaGCTTCGGTCTCGTCAAGCTGTTCTTCAACCTGATCGTCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: VPEATALAQSVPSST*LRSRQAVLQPDRHR Trigger: CCGATGACGATCAGGTTGAAGAACAGCTTGACGAGACCGAAGCCAAGTGGAGGAAGGAACGGATTGAGCGAGAGCAGTGGCTTCGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 90 bp | CCTCTGCTCAGAACCTCTGCTGGAGTCCTCAGCACCCATTCCAGCTaGATCTGCAGGGTTTACGGTTTCCTTGTAATGGCCCGACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: PLLRTSAGVLSTHSS*ICRVYGFLVMARLI Trigger: TATCAGTCGGGCCATTACAAGGAAACCGTAAACCCTGCAGATGCAGCTGGAATGGGTGCTGAGGACTCCAGCAGAGGTTCTGAGCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS GCA 90 bp | TCAGAGAGAACATTAGTTTCCGCTGCAATTCCAGCCCCTGTCCTCTaGTCAGAACCTCTGCTGGAGTCCTCAGCACCCATTCCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SERTLVSAAIPAPVL*SEPLLESSAPIPAA Trigger: TGCAGCTGGAATGGGTGCTGAGGACTCCAGCAGAGGTTCTGAGCAGAGGACAGGGGCTGGAATTGCAGCGGAAACTAATGTTCTCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS GCA 90 bp | CTCTTCCTCCCTGTCTGTTGGGAAAGAGCCGGAGCAAAGAGCAAGTaGCTCTTCCATCGGATCTTCTGTGCTGCTCTCCTTCTCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LFLPVCWERAGAKSK*LFHRIFCAALLLLT Trigger: AGTCAGGAGAAGGAGAGCAGCACAGAAGATCCGATGGAAGAGGCACTTGCTCTTTGCTCCGGCTCTTTCCCAACAGACAGGGAGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS CCA 90 bp | GATGATGTTCACGTTCACCGTCTGACAAGCCCTGGGACTGGCTGCTaGGTTAGCGTGCCTCCAGAAACGTTGCTTCAAGGCTTCCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: DDVHVHRLTSPGTGC*VSVPPETLLQGFQF Trigger: GAATTGGAAGCCTTGAAGCAACGTTTCTGGAGGCACGCTAACCCAGCAGCCAGTCCCAGGGCTTGTCAGACGGTGAACGTGAACATCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS TCA 90 bp | TCATCAAGTATCACAAAGGAATCTTCATCAGCGCCCAGCCGAGGTTaGCTGGAAACATCCACTCCCAGCTGTCTAAGTCGGTCCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSITKESSSAPSRG*LETSTPSCLSRSTV Trigger: CACCGTGGACCGACTTAGACAGCTGGGAGTGGATGTTTCCAGTCAACCTCGGCTGGGCGCTGATGAAGATTCCTTTGTGATACTTGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS TCA 90 bp | TTAGGAGACGGTGACATCATTGACGACAGTCCCCTTCTTCTGACCTaGGGCTTAGATGAGTCCTTTGCTGCCTCTGCCTTGGTGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGDGDIIDDSPLLLT*GLDESFAASALVGE Trigger: TTCTCCCACCAAGGCAGAGGCAGCAAAGGACTCATCTAAGCCTCAGGTCAGAAGAAGGGGACTGTCGTCAATGATGTCACCGTCTCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 90 bp | CTTAGCTTTCAACATCTGCAGTTTTTCACCTGGCTTTGCGTGGCTTaGTCCCTCCAGCTTCTCTGCTGCCAAAGTGACGGGTACCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSFQHLQFFTWLCVA*SLQLLCCQSDGYHF Trigger: GAAGTGGTACCCGTCACTTTGGCAGCAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCAGGTGAAAAACTGCAGATGTTGAAAGCTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS TCA 90 bp | CCAGGCCCGTCGCTGTGTAGATCCCCATCAGCAAGGTACCTCTCTTaGTATAACCGTAGTCGCCGCTTATCATCATCCAACATGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGPSLCRSPSARYLS*YNRSRRLSSSNMVF Trigger: GAAAACCATGTTGGATGATGATAAGCGGCGACTACGGTTATATCAAGAGAGGTACCTTGCTGATGGGGATCTACACAGCGACGGGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS CCA 90 bp | CCTCATTGTCTTCGATCCTGGGGATGGAGGATTCCTGCTGTGACATaGATCTGTCCCCAGGAGAATAAGGTCTGTCATCACTGTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PHCLRSWGWRIPAVT*ICPQENKVCHHCAS Trigger: AGAAGCACAGTGATGACAGACCTTATTCTCCTGGGGACAGATCCATGTCACAGCAGGAATCCTCCATCCCCAGGATCGAAGACAATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACGGGGAGCGCTGGGGTaGAGGTCAGACAGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AMKVNQRSRLEVYMTQKERGALG*RSDRAA Trigger: TGCTGCCCTGTCTGACCTCAACCCCAGCGCTCCCCG...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGGAGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAGAGACGGTGACATCATaGACGACAGTCCCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVGASSQAGFQCFLQFSIETVTS*TTVPFF Trigger: GAAGAAGGGGACTGTCGTCAATGATGTCACCGTCTC...TATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCTCCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 90 bp | TCCAAGTATTTCTTCAGTCTCATTTGGCGCTTCATCTTCTCAGACTaGTTCAGGAGCTCTTCTTCATCATCCTCCAGGTCCAGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKYFFSLIWRFIFSD*FRSSSSSSSRSRAS Trigger: GCTGGCCCTGGACCTGGAGGATGATGAAGAAGAGCTCCTGAAGCAGTCTGAGAAGATGAAGCGCCAAATGAGACTGAAGAAATACTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS CCA 90 bp | CCCCACGGCCTATCTGTCTGTTGCAAGGCTGATAGGATGGAATTGTaGAACCAATCAGCTCAAAGCTGCTATTGTGACTGCTCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PHGLSVCCKADRMEL*NQSAQSCYCDCSPL Trigger: CAAAGGAGAGCAGTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAATTCCATCCTATCAGCCTTGCAACAGACAGATAGGCCGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS TCA 90 bp | TTCTGCAGTGCTTTGGCTGTGACTTTCTTGGCTAGCATCATAAACTaGCTGTCGTCCCCAATGTCCTCTTCGTCAGCAGCAATTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FCSALAVTFLASIIN*LSSPMSSSSAAIFP Trigger: GGGGAAAATTGCTGCTGACGAAGAGGACATTGGGGACGACAGTCAGTTTATGATGCTAGCCAAGAAAGTCACAGCCAAAGCACTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTAGCAGCTCGTCCATGTaGGCGTCCATGGCATTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFSSSSM*ASMAFS Trigger: CGAGAATGCCATGGACGCCAACATGGACGAGCTGCT...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 90 bp | CTTCATCAGAATCTCTTTCACTCAAGGGCTCGAGTGTTTCAAAGCTaGCCTGTCCACTGTCTACAGGACTGTCTGCTGCTTCTTGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHQNLFHSRARVFQS*PVHCLQDCLLLLVK Trigger: TTTCACAAGAAGCAGCAGACAGTCCTGTAGACAGTGGACAGGGCAGCTTTGAAACACTCGAGCCCTTGAGTGAAAGAGATTCTGATGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000147675.2 |
||
| CDS CCA 90 bp | AAAACTTGCCCCACGGCCTATCTGTCTGTTGCAAGGCTGATAGGATaGAATTGTGGAACCAATCAGCTCAAAGCTGCTATTGTGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KTCPTAYLSVARLIG*NCGTNQLKAAIVTA Trigger: AGCAGTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAATTCCATCCTATCAGCCTTGCAACAGACAGATAGGCCGTGGGGCAAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS-3UTR CAA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTCTGGCTTTGCGTGGCTaGCTCCCTCCAGCTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTENLHLNLISRTGCFMSLALRG*LPPASL Trigger: CAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCAG...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS TCA 90 bp | ACCTCCTGGTCTGATGGTTTCAAAAGGGTTTCTGAGCACAGACTTTaGTTCCTGAACAACCACAGTATGACTGGCATTCTTCTGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSWSDGFKRVSEHRL*FLNNHSMTGILLQC Trigger: GCACTGCAGAAGAATGCCAGTCATACTGTGGTTGTTCAGGAATCAAAGTCTGTGCTCAGAAACCCTTTTGAAACCATCAGACCAGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS CCA 90 bp | CCTTACTTAGCCTCGCTGCCTTTCTTTCCTTCCTCGCACTGCCTTTaGATAACTCATTTCCGTCTTCTAATGAAAAAGCCTCACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PYLASLPFFPSSHCL*ITHFRLLMKKPHSP Trigger: TGGAGAGTGAGGCTTTTTCATTAGAAGACGGAAATGAGTTATCCAAAGGCAGTGCGAGGAAGGAAAGAAAGGCAGCGAGGCTAAGTAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAATCTGCATCCAACAGTaGGCTCTGAGTGTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLIPGWLSVLSAIFYNATICIQQ*ALSVIF Trigger: GAAGATGACACTCAGAGCCAACTGTTGGATGCAGAT...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACAGTCATTCTTCCTTGGTaGACATTTCTCCTCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLIPGWLSVLSAIFYNATVILPW*TFLLRL Trigger: CAGCCTGAGGAGAAATGTCAACCAAGGAAGAATGAC...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATCGTTCCTTCCTCCACTaGGCTTCGGTCTCGTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDRSFLH*ASVSSS Trigger: GCTTGACGAGACCGAAGCCAAGTGGAGGAAGGAACG...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 90 bp | ATGCTTCCTTACTTAGCCTCGCTGCCTTTCTTTCCTTCCTCGCACTaGCTTTGGATAACTCATTTCCGTCTTCTAATGAAAAAGCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: MLPYLASLPFFPSSH*LWITHFRLLMKKPH Trigger: GTGAGGCTTTTTCATTAGAAGACGGAAATGAGTTATCCAAAGGCAGTGCGAGGAAGGAAAGAAAGGCAGCGAGGCTAAGTAAGGAAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS GCA 90 bp | AGGATGGAATTGTGGAACCAATCAGCTCAAAGCTGCTATTGTGACTaGTCTCCTTTGTTAGCAGTGAACTCGAGTCATCCTCATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RMELWNQSAQSCYCD*SPLLAVNSSHPHPV Trigger: AACTGGATGAGGATGACTCGAGTTCACTGCTAACAAAGGAGAGCAGTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAATTCCATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS GCA 90 bp | TGCAAGGCTGATAGGATGGAATTGTGGAACCAATCAGCTCAAAGCTaGTATTGTGACTGCTCTCCTTTGTTAGCAGTGAACTCGAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CKADRMELWNQSAQS*YCDCSPLLAVNSSH Trigger: ATGACTCGAGTTCACTGCTAACAAAGGAGAGCAGTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAATTCCATCCTATCAGCCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS-3UTR CAA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTGCCGTCTCTTGGATTTaGCTTTTCCCTCAGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFAVSWI*LFPQLL Trigger: AAGGAGCTGAGGGAAAAGCAAAATCCAAGAGACGGC...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATGTTTTTCACCTGGCTTaGCGTGGCTTGCTCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDVFHLA*RGLLPP Trigger: TGGAGGGAGCAAGCCACGCAAAGCCAGGTGAAAAAC...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTTCTGAAGAGAGAGGCTaGGGGACACAGAGGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LTENLHLNLISRTGCFMSSEERG*GTQRAT Trigger: TGTTGCCCTCTGTGTCCCCAAGCCTCTCTCTTCAGA...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATCTTCCTCCCTGTCTGTaGGGAAAGAGCCGGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDLPPCL*GKSRSK Trigger: TTTGCTCCGGCTCTTTCCCAACAGACAGGGAGGAAG...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATCAGAGGGCAACAGACTaGCCAATGTCACTACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDQRATD*PMSLLV Trigger: CACCAGTAGTGACATTGGCAAGTCTGTTGCCCTCTG...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCAGTTTGTCAGACTGCTaGGCCAAGTATTCATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLSLSDC*AKYSSV Trigger: AACAGATGAATACTTGGCCAAGCAGTCTGACAAACT...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCTGCAGAAGGGAGGGAGGCTCTGGAACAAATGCTTTAAGTTGAAACTCCAAATCCATTCTCCTTaGAAACAAGCTGGAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RFLQKGGRLWNKCFKLKLQIHSP*KQAGSL Trigger: GAGACTTCCAGCTTGTTTCAAAGGAGAATGGATTTG...GAGTTTCAACTTAAAGCATTTGTTCCAGAGCCTCCCTCCCTTCTGCAGAAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | AGCCTCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACATTTCTTCAGTCTCATTaGGCGCTTCATCTTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLIPGWLSVLSAIFYNATFLQSH*ALHLLR Trigger: TCTGAGAAGATGAAGCGCCAAATGAGACTGAAGAAA...TGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAGAAAGACAAAGTTCCTaGAGTTTCGGGGAGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEERQSS*SFGERW Trigger: CCAGCGCTCCCCGAAACTCAAGGAACTTTGTCTTTC...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 90 bp | TCAAATCCATCTTCATTATCTAATTTAAATAATGCTTGGCGCTTCTaGCGCTCCTCAAGCCTTCGGAGTTTCATTGCCTCCTGCAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SNPSSLSNLNNAWRF*RSSSLRSFIASCNL Trigger: TAAGTTGCAGGAGGCAATGAAACTCCGAAGGCTTGAGGAGCGGCAGAAGCGCCAAGCATTATTTAAATTAGATAATGAAGATGGATTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS CCA 90 bp | ACGTTTGAAGAAATCGTGAATAGTTTTACTCTCAGGCATATGATATaGAAGATTAAGTGCAGATTCTCGGACCAGACGCTGGGTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TFEEIVNSFTLRHMI*KIKCRFSDQTLGLT Trigger: AGTGAGACCCAGCGTCTGGTCCGAGAATCTGCACTTAATCTTCCATATCATATGCCTGAGAGTAAAACTATTCACGATTTCTTCAAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS-3UTR CAA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATCCTCACTCTCCAGAGTaGGTTCCTTTTTCTTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDPHSPE*VPFSCD Trigger: ATCGCAAGAAAAAGGAACCAACTCTGGAGAGTGAGG...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GCAATTTTCTATAATGCCACACTTTCTTCTTCCTCTGAACACCTTGACTTGAAAGTGCCTCCAGAAACGTaGCTTCAAGGCTTCCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: AIFYNATLSSSSEHLDLKVPPET*LQGFQF Trigger: GAATTGGAAGCCTTGAAGCAACGTTTCTGGAGGCAC...TTTCAAGTCAAGGTGTTCAGAGGAAGAAGAAAGTGTGGCATTATAGAAAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAATGTGACTGCTCTCCTTaGTTAGCAGTGAACTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AMKVNQRSRLEVYMTQKECDCSP*LAVNSS Trigger: ACTCGAGTTCACTGCTAACAAAGGAGAGCAGTCACA...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATTTCTTCTGCAGTGCTTaGGCTGTGACTTTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDFFCSA*AVTFLA Trigger: AGCCAAGAAAGTCACAGCCAAAGCACTGCAGAAGAA...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GCGATGAAGGTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAAGCTGATAGGATGGAATaGTGGAACCAATCAGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: AMKVNQRSRLEVYMTQKEADRME*WNQSAQ Trigger: TTGAGCTGATTGGTTCCACAATTCCATCCTATCAGC...TTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAACCTTCATCGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | TCATCCCAGGCTGGCTTTCAGTGCTTTCTGCAATTTTCTATAATGCCACACTTTGTTGGTTCCTTTTTCTaGCGATTTTTCACCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSQAGFQCFLQFSIMPHFVGSFF*RFFTLF Trigger: AAACAAGGTGAAAAATCGCAAGAAAAAGGAACCAAC...AAAGTGTGGCATTATAGAAAATTGCAGAAAGCACTGAAAGCCAGCCTGGGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | CTAACAGAAAACCTACATCTTAATCTCATCAGTCGAACAGGCTGCTTTATGTCTCTGCTCTTAGGTTTCTaGCTCACAAAAATCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTENLHLNLISRTGCFMSLLLGF*LTKISS Trigger: TGAAGAGATTTTTGTGAGCAAGAAACCTAAGAGCAG...AGACATAAAGCAGCCTGTTCGACTGATGAGATTAAGATGTAGGTTTTCTGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS-3UTR CAA 90 bp | GTTAATCAGAGATCAAGACTAGAAGTTTACATGACACAGAAGGAACAGGACGATGCTTCCAATTCTCTGTaGGTTTTAGGTTCATCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VNQRSRLEVYMTQKEQDDASNSL*VLGSSS Trigger: ACTTGATGAACCTAAAACCAACAGAGAATTGGAAGC...ATCGTCCTGTTCCTTCTGTGTCATGTAAACTTCTAGTCTTGATCTCTGATTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 72 bp | CGCCGCCGCCGCCGTCACTACTGCCACTGCCGCTGCTaGTGCAGACTGGGTTTTCTGTTCAGGCATTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRRRRHYCHCRC*CRLGFLFRHSL Trigger: GAGGGAATGCCTGAACAGAAAACCCAGTCTGCAGCAGCAGCGGCAGTGGCAGTAGTGACGGCGGCGGCGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 72 bp | TTCAGGTGGCGCCGCCGCCGCCGTCACTACTGCCACTaGCGCTGCTGCTGCAGACTGGGTTTTCTGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRWRRRRRHYCH*RCCCRLGFLFR Trigger: CCTGAACAGAAAACCCAGTCTGCAGCAGCAGCGGCAGTGGCAGTAGTGACGGCGGCGGCGGCGCCACCTGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 72 bp | CACCTTTTCAGGTGGCGCCGCCGCCGCCGTCACTACTaGCACTGCCGCTGCTGCTGCAGACTGGGTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLFRWRRRRRHY*HCRCCCRLGFL Trigger: CAGAAAACCCAGTCTGCAGCAGCAGCGGCAGTGGCAGTAGTGACGGCGGCGGCGGCGCCACCTGAAAAGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS CCA 72 bp | AAGTCGGTCCACGGTGAATCGTCTCACCTTTTCAGGTaGCGCCGCCGCCGCCGTCACTACTGCCACTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: KSVHGESSHLFR*RRRRRHYCHCR Trigger: GCGGCAGTGGCAGTAGTGACGGCGGCGGCGGCGCCACCTGAAAAGGTGAGACGATTCACCGTGGACCGACTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS TCA 72 bp | AGGGCAGGAGGGTCAGATTCGGTGAGGTCTCCAGCCTaGTGCCCCTCATTGTCTTCGATCCTGGGGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RAGGSDSVRSPA*CPSLSSILGME Trigger: CTCCATCCCCAGGATCGAAGACAATGAGGGGCATCAGGCTGGAGACCTCACCGAATCTGACCCTCCTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 72 bp | GCTCGTCCATGTTGGCGTCCATGGCATTCTCGTCCATaGTGGCCAGTGGCAACTGGGGCTTCACAGCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: ARPCWRPWHSRP*WPVATGASQPD Trigger: ATCAGGCTGTGAAGCCCCAGTTGCCACTGGCCAGCATGGACGAGAATGCCATGGACGCCAACATGGACGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS CCA 72 bp | CACGTTCACCGTCTGACAAGCCCTGGGACTGGCTGCTaGGTTAGCGTGCCTCCAGAAACGTTGCTTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HVHRLTSPGTGC*VSVPPETLLQG Trigger: GCCTTGAAGCAACGTTTCTGGAGGCACGCTAACCCAGCAGCCAGTCCCAGGGCTTGTCAGACGGTGAACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS CCA 72 bp | GTTGGCGTCCATGGCATTCTCGTCCATGCTGGCCAGTaGCAACTGGGGCTTCACAGCCTGATATCGATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VGVHGILVHAGQ*QLGLHSLISMA Trigger: CGCCATCGATATCAGGCTGTGAAGCCCCAGTTGCCACTGGCCAGCATGGACGAGAATGCCATGGACGCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS TCA 72 bp | GTTCTTCTCCCTCCAGGGCAGGAGGGTCAGATTCGGTaGGGTCTCCAGCCTGATGCCCCTCATTGTCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: VLLPPGQEGQIR*GLQPDAPHCLR Trigger: TCGAAGACAATGAGGGGCATCAGGCTGGAGACCTCACCGAATCTGACCCTCCTGCCCTGGAGGGAGAAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS GCA 72 bp | CTGCAATTCCAGCCCCTGTCCTCTGCTCAGAACCTCTaGTGGAGTCCTCAGCACCCATTCCAGCTGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQFQPLSSAQNL*WSPQHPFQLHL Trigger: CAGATGCAGCTGGAATGGGTGCTGAGGACTCCAGCAGAGGTTCTGAGCAGAGGACAGGGGCTGGAATTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS GCA 72 bp | TGGCTTTGCGTGGCTTGCTCCCTCCAGCTTCTCTGCTaGCAAAGTGACGGGTACCACTTCTGCCTTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLCVACSLQLLC*QSDGYHFCLQL Trigger: GAGCTGAAGGCAGAAGTGGTACCCGTCACTTTGGCAGCAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS GCA 72 bp | ACCTGGCTTTGCGTGGCTTGCTCCCTCCAGCTTCTCTaGTGCCAAAGTGACGGGTACCACTTCTGCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TWLCVACSLQLL*CQSDGYHFCLQ Trigger: CTGAAGGCAGAAGTGGTACCCGTCACTTTGGCAGCAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS CCA 72 bp | GGTGGTGAAGTCCACAGAGTGTCCTGTCTGGTGGCCTaGCTCCAAGGAAGGAGCCTCTTGAGTCTCAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: GGEVHRVSCLVA*LQGRSLLSLRT Trigger: AGTCCTGAGACTCAAGAGGCTCCTTCCTTGGAGCCAGGCCACCAGACAGGACACTCTGTGGACTTCACCACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000147675.2 |
||
| CDS CAA 90 bp | CACAGAGTGTCCTGTCTGGTGGCCTGGCTCCAAGGAAGGAGCCTCTaGAGTCTCAGGACTCTCCTGACTCGGAGTTTCCTCCATGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: HRVSCLVAWLQGRSL*SLRTLLTRSFLHVT Trigger: AGTGACATGGAGGAAACTCCGAGTCAGGAGAGTCCTGAGACTCAAGAGGCTCCTTCCTTGGAGCCAGGCCACCAGACAGGACACTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000147675.2 |
||
| CDS GCA 72 bp | CAGCTTCTCTGCTGCCAAAGTGACGGGTACCACTTCTaGCTTCAGCTCCTCCTTCCCGTTAGTGCCCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QLLCCQSDGYHF*LQLLLPVSAQV Trigger: GACTTGGGCACTAACGGGAAGGAGGAGCTGAAGGCAGAAGTGGTACCCGTCACTTTGGCAGCAGAGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS CCA 72 bp | TACTTACATGACTTCAGCAGGGCCATGGCACTGCCCTaGCACGTGGGCCGGGGCTTACGTTTGAAGAAATCG | + |
|
Preference number: 6 (lower is better) Translates to: YLHDFSRAMALP*HVGRGLRLKKS Trigger: CGATTTCTTCAAACGTAAGCCCCGGCCCACGTGCCAGGGCAGTGCCATGGCCCTGCTGAAGTCATGTAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS CCA 72 bp | GCCGTCACTACTGCCACTGCCGCTGCTGCTGCAGACTaGGTTTTCTGTTCAGGCATTCCCTCTTTTGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVTTATAAAAAD*VFCSGIPSFAS Trigger: AGACGCAAAAGAGGGAATGCCTGAACAGAAAACCCAGTCTGCAGCAGCAGCGGCAGTGGCAGTAGTGACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS CCA 72 bp | ACTGTCCAGTGCACAAATCCAGCAGCTCGTCCATGTTaGCGTCCATGGCATTCTCGTCCATGCTGGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TVQCTNPAARPC*RPWHSRPCWPV Trigger: CACTGGCCAGCATGGACGAGAATGCCATGGACGCCAACATGGACGAGCTGCTGGATTTGTGCACTGGACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS GCA 72 bp | TCTGCTGGAGTCCTCAGCACCCATTCCAGCTGCATCTaGAGGGTTTACGGTTTCCTTGTAATGGCCCGACTG | + |
|
Preference number: 6 (lower is better) Translates to: SAGVLSTHSSCI*RVYGFLVMARL Trigger: CAGTCGGGCCATTACAAGGAAACCGTAAACCCTGCAGATGCAGCTGGAATGGGTGCTGAGGACTCCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS GCA 72 bp | CAACATCTGCAGTTTTTCACCTGGCTTTGCGTGGCTTaGTCCCTCCAGCTTCTCTGCTGCCAAAGTGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: QHLQFFTWLCVA*SLQLLCCQSDG Trigger: CCCGTCACTTTGGCAGCAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCAGGTGAAAAACTGCAGATGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS CCA 72 bp | GGTCTCCAGCCTGATGCCCCTCATTGTCTTCGATCCTaGGGATGGAGGATTCCTGCTGTGACATGGATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLQPDAPHCLRS*GWRIPAVTWIC Trigger: ACAGATCCATGTCACAGCAGGAATCCTCCATCCCCAGGATCGAAGACAATGAGGGGCATCAGGCTGGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS CCA 72 bp | GGTCAGACAGGGCAGCAAGTTTTTGGAGCACAGCTTTaGGCTGGTTTAGCAGGGAGCCTGTCTTCAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GQTGQQVFGAQL*AGLAGSLSSAG Trigger: ACCAGCTGAAGACAGGCTCCCTGCTAAACCAGCCCAAAGCTGTGCTCCAAAAACTTGCTGCCCTGTCTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
||
| CDS CAA 72 bp | AACTGTCCAGTGCACAAATCCAGCAGCTCGTCCATGTaGGCGTCCATGGCATTCTCGTCCATGCTGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: NCPVHKSSSSSM*ASMAFSSMLAS Trigger: ACTGGCCAGCATGGACGAGAATGCCATGGACGCCAACATGGACGAGCTGCTGGATTTGTGCACTGGACAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
||
| CDS TCA 72 bp | TACGGTTTCCTTGTAATGGCCCGACTGATACTTACATaGCTTCAGCAGGGCCATGGCACTGCCCTGGCACGT | + |
|
Preference number: 6 (lower is better) Translates to: YGFLVMARLILT*LQQGHGTALAR Trigger: ACGTGCCAGGGCAGTGCCATGGCCCTGCTGAAGTCATGTAAGTATCAGTCGGGCCATTACAAGGAAACCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
||
| CDS TCA 72 bp | CCGGATCCTTCCCACAAGCCTCATCTGATCCAGCAGTaGTCCCGGCTTCTTCTGAGACCTCAGAGAGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: PDPSHKPHLIQQ*SRLLLRPQREH Trigger: ATGTTCTCTCTGAGGTCTCAGAAGAAGCCGGGATCACTGCTGGATCAGATGAGGCTTGTGGGAAGGATCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
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| CDS GCA 72 bp | GGACGGCGATCTGAATCCTGCTGTAGGGAGAAAACTTaGCCCACGGCCTATCTGTCTGTTGCAAGGCTGATA | + |
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Preference number: 6 (lower is better) Translates to: GRRSESCCREKT*PTAYLSVARLI Trigger: TATCAGCCTTGCAACAGACAGATAGGCCGTGGGGCAAGTTTTCTCCCTACAGCAGGATTCAGATCGCCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS GCA 72 bp | CCTGTCTGTTGGGAAAGAGCCGGAGCAAAGAGCAAGTaGCTCTTCCATCGGATCTTCTGTGCTGCTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PVCWERAGAKSK*LFHRIFCAALL Trigger: AAGGAGAGCAGCACAGAAGATCCGATGGAAGAGGCACTTGCTCTTTGCTCCGGCTCTTTCCCAACAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS GCA 72 bp | CCTCCCCATCGTACTCGTCCTCACTTCCCACGTCACTaGCTGACACCTCTGCCTCATCTTCCAAGTATTTCT | + |
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Preference number: 6 (lower is better) Translates to: PPHRTRPHFPRH*LTPLPHLPSIS Trigger: AGAAATACTTGGAAGATGAGGCAGAGGTGTCAGGCAGTGACGTGGGAAGTGAGGACGAGTACGATGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS TCA 72 bp | ATCACAAAGGAATCTTCATCAGCGCCCAGCCGAGGTTaGCTGGAAACATCCACTCCCAGCTGTCTAAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: ITKESSSAPSRG*LETSTPSCLSR Trigger: CCGACTTAGACAGCTGGGAGTGGATGTTTCCAGTCAACCTCGGCTGGGCGCTGATGAAGATTCCTTTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS CCA 72 bp | CTTCGATCCTGGGGATGGAGGATTCCTGCTGTGACATaGATCTGTCCCCAGGAGAATAAGGTCTGTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: LRSWGWRIPAVT*ICPQENKVCHH Trigger: GTGATGACAGACCTTATTCTCCTGGGGACAGATCCATGTCACAGCAGGAATCCTCCATCCCCAGGATCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS CCA 72 bp | GCTTTCAACATCTGCAGTTTTTCACCTGGCTTTGCGTaGCTTGCTCCCTCCAGCTTCTCTGCTGCCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: AFNICSFSPGFA*LAPSSFSAAKV Trigger: CACTTTGGCAGCAGAGAAGCTGGAGGGAGCAAGCCACGCAAAGCCAGGTGAAAAACTGCAGATGTTGAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CAA 90 bp | CTCTTGGATTTTGCTTTTCCCTCAGCTCCTTCTCTGAGGAGTGTTTaGGAGAGCTTTCTGCCGGTGGTGAAGTCCACAGAGTGTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LLDFAFPSAPSLRSV*ESFLPVVKSTECPV Trigger: GACAGGACACTCTGTGGACTTCACCACCGGCAGAAAGCTCTCCAAAACACTCCTCAGAGAAGGAGCTGAGGGAAAAGCAAAATCCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000147675.2 |
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| CDS CAA 90 bp | TTCATCAAGTATCACAAAGGAATCTTCATCAGCGCCCAGCCGAGGTaGACTGGAAACATCCACTCCCAGCTGTCTAAGTCGGTCCACGGT | + |
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Preference number: 6 (lower is better) Translates to: FIKYHKGIFISAQPR*TGNIHSQLSKSVHG Trigger: ACCGTGGACCGACTTAGACAGCTGGGAGTGGATGTTTCCAGTCAACCTCGGCTGGGCGCTGATGAAGATTCCTTTGTGATACTTGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS TCA 72 bp | ATTGTCTTCGATCCTGGGGATGGAGGATTCCTGCTGTaGCATGGATCTGTCCCCAGGAGAATAAGGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: IVFDPGDGGFLL*HGSVPRRIRSV Trigger: GACAGACCTTATTCTCCTGGGGACAGATCCATGTCACAGCAGGAATCCTCCATCCCCAGGATCGAAGACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS TCA 72 bp | CTTGGTGGGAGAAAGTGTATGAAAGACAAAGTTCCTTaGGTTTCGGGGAGCGCTGGGGTTGAGGTCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: LGGRKCMKDKVP*VSGSAGVEVRQ Trigger: CTGTCTGACCTCAACCCCAGCGCTCCCCGAAACTCAAGGAACTTTGTCTTTCATACACTTTCTCCCACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS CCA 72 bp | CCTCCATGTCACTCTCATCACTGTCAGCCAGGGCTTTaGGAAAGCTTCTGCTCTGACTCTTCCCTGAATGTA | + |
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Preference number: 6 (lower is better) Translates to: PPCHSHHCQPGL*ESFCSDSSLNV Trigger: TACATTCAGGGAAGAGTCAGAGCAGAAGCTTTCCCAAAGCCCTGGCTGACAGTGATGAGAGTGACATGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000147675.2 |
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| CDS CAA 72 bp | TTTGCTTTTCCCTCAGCTCCTTCTCTGAGGAGTGTTTaGGAGAGCTTTCTGCCGGTGGTGAAGTCCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: FAFPSAPSLRSV*ESFLPVVKSTE Trigger: CTCTGTGGACTTCACCACCGGCAGAAAGCTCTCCAAAACACTCCTCAGAGAAGGAGCTGAGGGAAAAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000147675.2 |
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| CDS CAA 72 bp | TATCACAAAGGAATCTTCATCAGCGCCCAGCCGAGGTaGACTGGAAACATCCACTCCCAGCTGTCTAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: YHKGIFISAQPR*TGNIHSQLSKS Trigger: CGACTTAGACAGCTGGGAGTGGATGTTTCCAGTCAACCTCGGCTGGGCGCTGATGAAGATTCCTTTGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS CAA 90 bp | TTGCCCCACGGCCTATCTGTCTGTTGCAAGGCTGATAGGATGGAATaGTGGAACCAATCAGCTCAAAGCTGCTATTGTGACTGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPHGLSVCCKADRME*WNQSAQSCYCDCSP Trigger: AGGAGAGCAGTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAATTCCATCCTATCAGCCTTGCAACAGACAGATAGGCCGTGGGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS TCA 72 bp | GCTTTGGCTGTGACTTTCTTGGCTAGCATCATAAACTaGCTGTCGTCCCCAATGTCCTCTTCGTCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ALAVTFLASIIN*LSSPMSSSSAA Trigger: TGCTGCTGACGAAGAGGACATTGGGGACGACAGTCAGTTTATGATGCTAGCCAAGAAAGTCACAGCCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS GCA 72 bp | AATCTCTTTCACTCAAGGGCTCGAGTGTTTCAAAGCTaGCCTGTCCACTGTCTACAGGACTGTCTGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: NLFHSRARVFQS*PVHCLQDCLLL Trigger: AAGCAGCAGACAGTCCTGTAGACAGTGGACAGGGCAGCTTTGAAACACTCGAGCCCTTGAGTGAAAGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000147675.2 |
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| CDS CAA 72 bp | TCATCATCCTCCAGGTCCAGGGCCAGCTCTTCATCATaGGAGTCACTGTGTTCATCCTCGTCACTAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SSSSRSRASSSS*ESLCSSSSLAN Trigger: ATTTGCTAGTGACGAGGATGAACACAGTGACTCCAATGATGAAGAGCTGGCCCTGGACCTGGAGGATGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS CAA 72 bp | GGGAGGTATCATCTATGTGTTTCCATCGGAATTTTCTaGTTCGTCCAGGCCCGTCGCTGTGTAGATCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GRYHLCVSIGIF*FVQARRCVDPH Trigger: ATGGGGATCTACACAGCGACGGGCCTGGACGAACAAGAAAATTCCGATGGAAACACATAGATGATACCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS GCA 72 bp | TTCTTCAGTCTCATTTGGCGCTTCATCTTCTCAGACTaGTTCAGGAGCTCTTCTTCATCATCCTCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FFSLIWRFIFSD*FRSSSSSSSRS Trigger: GGACCTGGAGGATGATGAAGAAGAGCTCCTGAAGCAGTCTGAGAAGATGAAGCGCCAAATGAGACTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS CCA 72 bp | CCCACGGCCTATCTGTCTGTTGCAAGGCTGATAGGATaGAATTGTGGAACCAATCAGCTCAAAGCTGCTATT | + |
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Preference number: 6 (lower is better) Translates to: PTAYLSVARLIG*NCGTNQLKAAI Trigger: AATAGCAGCTTTGAGCTGATTGGTTCCACAATTCCATCCTATCAGCCTTGCAACAGACAGATAGGCCGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CAA 72 bp | CTGTCTGCTGCTTCTTGTGAAAGAAGTTTTAGATCGTaGACTTCCAGGTTAACCTCAGAACCCACCTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: LSAASCERSFRS*TSRLTSEPTSP Trigger: CGGCGAGGTGGGTTCTGAGGTTAACCTGGAAGTCAACGATCTAAAACTTCTTTCACAAGAAGCAGCAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS CAA 90 bp | TCCTTACTTAGCCTCGCTGCCTTTCTTTCCTTCCTCGCACTGCCTTaGGATAACTCATTTCCGTCTTCTAATGAAAAAGCCTCACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLLSLAAFLSFLALP*DNSFPSSNEKASLS Trigger: GGAGAGTGAGGCTTTTTCATTAGAAGACGGAAATGAGTTATCCAAAGGCAGTGCGAGGAAGGAAAGAAAGGCAGCGAGGCTAAGTAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
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| CDS CAA 90 bp | GTGGAGTCTGAAGAGAGAGGCTTGGGGACACAGAGGGCAACAGACTaGCCAATGTCACTACTGGTGTCTGTATTTTCTTTATCTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VESEERGLGTQRATD*PMSLLVSVFSLSVS Trigger: AGAAACAGATAAAGAAAATACAGACACCAGTAGTGACATTGGCAAGTCTGTTGCCCTCTGTGTCCCCAAGCCTCTCTCTTCAGACTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CAA 72 bp | GAAGAGAGAGGCTTGGGGACACAGAGGGCAACAGACTaGCCAATGTCACTACTGGTGTCTGTATTTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: EERGLGTQRATD*PMSLLVSVFSL Trigger: TAAAGAAAATACAGACACCAGTAGTGACATTGGCAAGTCTGTTGCCCTCTGTGTCCCCAAGCCTCTCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CAA 72 bp | GGCCTATCTGTCTGTTGCAAGGCTGATAGGATGGAATaGTGGAACCAATCAGCTCAAAGCTGCTATTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: GLSVCCKADRME*WNQSAQSCYCD Trigger: GTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAATTCCATCCTATCAGCCTTGCAACAGACAGATAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CAA 72 bp | CTCTGCCTCATCTTCCAAGTATTTCTTCAGTCTCATTaGGCGCTTCATCTTCTCAGACTGCTTCAGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LCLIFQVFLQSH*ALHLLRLLQEL Trigger: GAGCTCCTGAAGCAGTCTGAGAAGATGAAGCGCCAAATGAGACTGAAGAAATACTTGGAAGATGAGGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS CAA 90 bp | TTGTGGAACCAATCAGCTCAAAGCTGCTATTGTGACTGCTCTCCTTaGTTAGCAGTGAACTCGAGTCATCCTCATCCAGTTTGTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: LWNQSAQSCYCDCSP*LAVNSSHPHPVCQT Trigger: AGTCTGACAAACTGGATGAGGATGACTCGAGTTCACTGCTAACAAAGGAGAGCAGTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS TCA 72 bp | GGAATTGTGGAACCAATCAGCTCAAAGCTGCTATTGTaGCTGCTCTCCTTTGTTAGCAGTGAACTCGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GIVEPISSKLLL*LLSFVSSELES Trigger: TGACTCGAGTTCACTGCTAACAAAGGAGAGCAGTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS GCA 72 bp | AAGAGAGAGGCTTGGGGACACAGAGGGCAACAGACTTaGCAATGTCACTACTGGTGTCTGTATTTTCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: KREAWGHRGQQT*QCHYWCLYFLY Trigger: ATAAAGAAAATACAGACACCAGTAGTGACATTGGCAAGTCTGTTGCCCTCTGTGTCCCCAAGCCTCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CCA 72 bp | CTATCTGTCTGTTGCAAGGCTGATAGGATGGAATTGTaGAACCAATCAGCTCAAAGCTGCTATTGTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: LSVCCKADRMEL*NQSAQSCYCDC Trigger: GCAGTCACAATAGCAGCTTTGAGCTGATTGGTTCCACAATTCCATCCTATCAGCCTTGCAACAGACAGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CAA 72 bp | CAATCAGCTCAAAGCTGCTATTGTGACTGCTCTCCTTaGTTAGCAGTGAACTCGAGTCATCCTCATCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: QSAQSCYCDCSP*LAVNSSHPHPV Trigger: AACTGGATGAGGATGACTCGAGTTCACTGCTAACAAAGGAGAGCAGTCACAATAGCAGCTTTGAGCTGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS TCA 72 bp | GTGTTCATCCTCGTCACTAGCAAATCCATTCTCCTTTaGAACAAGCTGGAAGTCTCCAAATTCCTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VFILVTSKSILL*NKLEVSKFLLF Trigger: GAAGAGGAGGAATTTGGAGACTTCCAGCTTGTTTCAAAGGAGAATGGATTTGCTAGTGACGAGGATGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048391.15 |
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| CDS GCA 72 bp | TCTTCATTATCTAATTTAAATAATGCTTGGCGCTTCTaGCGCTCCTCAAGCCTTCGGAGTTTCATTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLSNLNNAWRF*RSSSLRSFIAS Trigger: GGAGGCAATGAAACTCCGAAGGCTTGAGGAGCGGCAGAAGCGCCAAGCATTATTTAAATTAGATAATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CAA 90 bp | GTTAGCAGTGAACTCGAGTCATCCTCATCCAGTTTGTCAGACTGCTaGGCCAAGTATTCATCTGTTTCTGACTTTTCTTCAGTAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSSELESSSSSLSDC*AKYSSVSDFSSVGK Trigger: CTTTCCTACTGAAGAAAAGTCAGAAACAGATGAATACTTGGCCAAGCAGTCTGACAAACTGGATGAGGATGACTCGAGTTCACTGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CCA 72 bp | AACTCGAGTCATCCTCATCCAGTTTGTCAGACTGCTTaGCCAAGTATTCATCTGTTTCTGACTTTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: NSSHPHPVCQTA*PSIHLFLTFLQ Trigger: CTGAAGAAAAGTCAGAAACAGATGAATACTTGGCCAAGCAGTCTGACAAACTGGATGAGGATGACTCGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CAA 72 bp | GAACTCGAGTCATCCTCATCCAGTTTGTCAGACTGCTaGGCCAAGTATTCATCTGTTTCTGACTTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ELESSSSSLSDC*AKYSSVSDFSS Trigger: TGAAGAAAAGTCAGAAACAGATGAATACTTGGCCAAGCAGTCTGACAAACTGGATGAGGATGACTCGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS TCA 72 bp | ATGTTTAAAAATCCATCTGCATCCAACAGTTGGCTCTaGGTGTCATCTTCCAAACAGAACTGGAAGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: MFKNPSASNSWL*VSSSKQNWKSP Trigger: AGGAGACTTCCAGTTCTGTTTGGAAGATGACACTCAGAGCCAACTGTTGGATGCAGATGGATTTTTAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000126512.2 |
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| CDS CCA 72 bp | GAAATCGTGAATAGTTTTACTCTCAGGCATATGATATaGAAGATTAAGTGCAGATTCTCGGACCAGACGCTG | + |
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Preference number: 6 (lower is better) Translates to: EIVNSFTLRHMI*KIKCRFSDQTL Trigger: CAGCGTCTGGTCCGAGAATCTGCACTTAATCTTCCATATCATATGCCTGAGAGTAAAACTATTCACGATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048391.15 ENSMUST00000129795.2 |
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