Pregenerated sensors for CLRN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043850Ensembl transcript IDs: ENSMUST00000051408.8, ENSMUST00000055636.13, ENSMUST00000072551.7
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAAGGCTCCCTGGAGTCTTACAAAACTGTATGTCATGTGCCTGTTaGGTTCTGCTTGGGAGAACGTGCATCTTATCGGTCAGTAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LRLPGVLQNCMSCAC*VLLGRTCILSVSKD Trigger: GTCCTTACTGACCGATAAGATGCACGTTCTCCCAAGCAGAACTCAACAGGCACATGACATACAGTTTTGTAAGACTCCAGGGAGCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR CCA 90 bp | GCCCTTTATCAACTGAGCCATCTTCCTAGTTCCAGATTGGTTTTCTaGAGCATTTCCAAACTCTATGATCTCTGGTGTTTGTGGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: ALYQLSHLPSSRLVF*SISKLYDLWCLWPG Trigger: CCCTGGCCACAAACACCAGAGATCATAGAGTTTGGAAATGCTCCAGAAAACCAATCTGGAACTAGGAAGATGGCTCAGTTGATAAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 90 bp | ACTAACTATGCAGGCCATTACCCATCAGGAAGAACGTCTTCCCAGTaGAACCATCCTCCTGCTTCTGTTATTTTCCAGCCTGAATCCTTA | + |
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Preference number: 1 (lower is better) Translates to: TNYAGHYPSGRTSSQ*NHPPASVIFQPESL Trigger: TAAGGATTCAGGCTGGAAAATAACAGAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCTGATGGGTAATGGCCTGCATAGTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR TCA 90 bp | GGTCTCCAGCAGATTCATTTGGTGAATAATTCAAGGAGAAAGATTTaGCTTGGGCCATGCTTCATGTCTCCCATGACACACTGCAATCCC | + |
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Preference number: 1 (lower is better) Translates to: GLQQIHLVNNSRRKI*LGPCFMSPMTHCNP Trigger: GGGATTGCAGTGTGTCATGGGAGACATGAAGCATGGCCCAAGTCAAATCTTTCTCCTTGAATTATTCACCAAATGAATCTGCTGGAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 90 bp | CACCATAATGTCTTTGTCCTTTGTTCTTTCCTGAGGGTAACACATTaGGAGTTAAGGAGTGTCAGTTTCAGGCTCACTTGTGGCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: HHNVFVLCSFLRVTH*ELRSVSFRLTCGLW Trigger: CCAGAGGCCACAAGTGAGCCTGAAACTGACACTCCTTAACTCTCAATGTGTTACCCTCAGGAAAGAACAAAGGACAAAGACATTATGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR CCA 90 bp | AGTTCCAGATTGGTTTTCTGGAGCATTTCCAAACTCTATGATCTCTaGTGTTTGTGGCCAGGGCACCATAATGTCTTTGTCCTTTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSRLVFWSISKLYDL*CLWPGHHNVFVLCS Trigger: AGAACAAAGGACAAAGACATTATGGTGCCCTGGCCACAAACACCAGAGATCATAGAGTTTGGAAATGCTCCAGAAAACCAATCTGGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR GCA 90 bp | AGAGTAACCAGCAGGCCATCACCAGAGCTGGTTATATTTCAGGTGTaGAGTCTCTCCTTCCTTGTATGTAAATTGTTCCCAAATGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: RVTSRPSPELVIFQV*SLSFLVCKLFPNEN Trigger: ATTTTCATTTGGGAACAATTTACATACAAGGAAGGAGAGACTGCACACCTGAAATATAACCAGCTCTGGTGATGGCCTGCTGGTTACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGCTGGTGAGCTTTAAGACTTGCCTAGCTCTGCCTTCCCAGTGCTGGGATCGGTCAGTAAGGACATaGAGTAACCATCCGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: GLLVSFKTCLALPSQCWDRSVRT*SNHPSI Trigger: GATGGACGGATGGTTACTCCATGTCCTTACTGACCG...ATCCCAGCACTGGGAAGGCAGAGCTAGGCAAGTCTTAAAGCTCACCAGCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGCATGCACCAGCTCCTGGACAGACTAGCTGGTGGGCTTCTAGAAACTTCTCTTGCTTTTTGCATTaGTCCCAGCTCCACGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PKHAPAPGQTSWWASRNFSCFLH*SQLHVV Trigger: GACCACGTGGAGCTGGGATCAATGCAAAAAGCAAGA...GAAGTTTCTAGAAGCCCACCAGCTAGTCTGTCCAGGAGCTGGTGCATGCTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTGTGTGGGGACACACTCCACAGGACCTCCACCATCAGACAACGGAAGTCACAACCCCAGTGCACTaGAACAATAAATTCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TCVWGHTPQDLHHQTTEVTTPVH*NNKFLL Trigger: CAAGAGGAATTTATTGTTCCAGTGCACTGGGGTTGT...GACTTCCGTTGTCTGATGGTGGAGGTCCTGTGGAGTGTGTCCCCACACACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGCATGCACCAGCTCCTGGACAGACTAGCTGGTGGGCTTCTAGAAACTTCGTGAAACCATCCTCCTaGTTCTGTTATTTTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PKHAPAPGQTSWWASRNFVKPSS*FCYFPA Trigger: GGCTGGAAAATAACAGAAGCAGGAGGATGGTTTCAC...GAAGTTTCTAGAAGCCCACCAGCTAGTCTGTCCAGGAGCTGGTGCATGCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGCTGGTGAGCTTTAAGACTTGCCTAGCTCTGCCTTCCCAGTGCTGGGATACAACCCCAGTGCACTaGAACAATAAATTCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GLLVSFKTCLALPSQCWDTTPVH*NNKFLL Trigger: CAAGAGGAATTTATTGTTCCAGTGCACTGGGGTTGT...ATCCCAGCACTGGGAAGGCAGAGCTAGGCAAGTCTTAAAGCTCACCAGCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR TCA 90 bp | TGGTGTTTGTGGCCAGGGCACCATAATGTCTTTGTCCTTTGTTCTTTCCTGAGGCGTATAAAAACTCACTaGAAAGGTGCTGGGGGTCGC | + |
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Preference number: 2 (lower is better) Translates to: WCLWPGHHNVFVLCSFLRRIKTH*KGAGGR Trigger: GCGACCCCCAGCACCTTTTCAGTGAGTTTTTATACG...CCTCAGGAAAGAACAAAGGACAAAGACATTATGGTGCCCTGGCCACAAACACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGCTGGTGAGCTTTAAGACTTGCCTAGCTCTGCCTTCCCAGTGCTGGGATCCATCAATCATATTGTaGCTAGTTGCTGATGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: GLLVSFKTCLALPSQCWDPSIIL*LVADAL Trigger: TAGAGCATCAGCAACTAGGCACAATATGATTGATGG...ATCCCAGCACTGGGAAGGCAGAGCTAGGCAAGTCTTAAAGCTCACCAGCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR TCA 90 bp | CTATGCAGGCCATTACCCATCAGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGTTATTTTCCAGCCTaGATCCTTACTACATGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LCRPLPIRKNVFPVKPSSCYFPA*ILTTCS Trigger: AGAGCATGTAGTAAGGATTCAGGCTGGAAAATAACA...GGAGGATGGTTTCACTGGGAAGACGTTCTTCCTGATGGGTAATGGCCTGCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR-3UTR GCA 90 bp | AGACACCAATTTCACCTCTGTTTTCTGGGATCTGTGACTATGTGGACAATTAGAAACTCACTGAAAAGGTaGTGGGGGTCGCTGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RHQFHLCFLGSVTMWTIRNSLKR*WGSLPA Trigger: TGCTGGCAGCGACCCCCAGCACCTTTTCAGTGAGTT...TCTAATTGTCCACATAGTCACAGATCCCAGAAAACAGAGGTGAAATTGGTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGCATGCACCAGCTCCTGGACAGACTAGCTGGTGGGCTTCTAGAAACTTCGGATCTGTGACTATGTaGACAATTAGAAATAACGTC | + |
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Preference number: 2 (lower is better) Translates to: PKHAPAPGQTSWWASRNFGSVTM*TIRNNV Trigger: GACGTTATTTCTAATTGTCCACATAGTCACAGATCC...GAAGTTTCTAGAAGCCCACCAGCTAGTCTGTCCAGGAGCTGGTGCATGCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGTCAGTTTCAGGCTCACTTGTGGCCTCTGGTCTCCAGCAGATTCATTTGAACTTACAAAGAACTTaGAGGTTTGCAATGATTCGG | + |
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Preference number: 2 (lower is better) Translates to: GVSVSGSLVASGLQQIHLNLQRT*RFAMIR Trigger: CCGAATCATTGCAAACCTTCAAGTTCTTTGTAAGTT...CAAATGAATCTGCTGGAGACCAGAGGCCACAAGTGAGCCTGAAACTGACACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR TCA 90 bp | TTAAGACACCAATTTCACCTCTGTTTTCTGGGATCTGTGACTATGTGGACAATTCTAAAGGACAGGAACTaGCCTGTGTGTGGGGACACA | + |
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Preference number: 2 (lower is better) Translates to: LRHQFHLCFLGSVTMWTILKDRN*PVCGDT Trigger: TGTGTCCCCACACACAGGTCAGTTCCTGTCCTTTAG...AATTGTCCACATAGTCACAGATCCCAGAAAACAGAGGTGAAATTGGTGTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR-3UTR GCA 90 bp | TTAAGACACCAATTTCACCTCTGTTTTCTGGGATCTGTGACTATGTGGACAATTCTGCTTGGGAGAACGTaGATCTTATCGGTCAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: LRHQFHLCFLGSVTMWTILLGRT*ILSVSK Trigger: CTTACTGACCGATAAGATGCACGTTCTCCCAAGCAG...AATTGTCCACATAGTCACAGATCCCAGAAAACAGAGGTGAAATTGGTGTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR CAA 90 bp | CATCACCAGAGCTGGTTATATTTCAGGTGTGCAGTCTCTCCTTCCTaGTATGTAAATTGTTCCCAAATGAAAATGTGTGTGTTCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: HHQSWLYFRCAVSPS*YVNCSQMKMCVFMR Trigger: CCTCATGAACACACACATTTTCATTTGGGAACAATTTACATACAAGGAAGGAGAGACTGCACACCTGAAATATAACCAGCTCTGGTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR GCA 90 bp | AGCAAACTTACAAAGAACTTGAAGGTTTGCAATGATTCGGTGCACTGTCAGTTTATTCCTCTTGCTTTTTaGATTGATCCCAGCTCCACG | + |
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Preference number: 2 (lower is better) Translates to: SKLTKNLKVCNDSVHCQFIPLAF*IDPSST Trigger: CGTGGAGCTGGGATCAATGCAAAAAGCAAGAGGAAT...AAACTGACAGTGCACCGAATCATTGCAAACCTTCAAGTTCTTTGTAAGTTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR-3UTR CAA 90 bp | ACCTGTGTGTGGGGACACACTCCACAGGACCTCCACCATCAGACAACGGAAGTCCTCTTGCTTTTTGCATaGATCCCAGCTCCACGTGGT | + |
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Preference number: 3 (lower is better) Translates to: TCVWGHTPQDLHHQTTEVLLLFA*IPAPRG Trigger: ACCACGTGGAGCTGGGATCAATGCAAAAAGCAAGAG...GACTTCCGTTGTCTGATGGTGGAGGTCCTGTGGAGTGTGTCCCCACACACAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR TCA 72 bp | GCTCTGCCTTCCCAGTGCTGGGATCACAGACATGTATaGAACCCATGCGTTTCTCATGGGTGCTGGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: ALPSQCWDHRHV*NPCVSHGCWGI Trigger: GATTCCCCAGCACCCATGAGAAACGCATGGGTTTCATACATGTCTGTGATCCCAGCACTGGGAAGGCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 72 bp | TCCCTCCCTTTCCCTCCTAACACAGCCTTTTGTGCTTaGGAATTTCAGGGTCTGACCTCCAGGTCAGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: SLPFPPNTAFCA*EFQGLTSRSGH Trigger: GTGCCCTGACCTGGAGGTCAGACCCTGAAATTCTCAAGCACAAAAGGCTGTGTTAGGAGGGAAAGGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 72 bp | CTAACACAGCCTTTTGTGCTTGAGAATTTCAGGGTCTaGCCTCCAGGTCAGGGCACTACTAGCCCATCACCA | + |
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Preference number: 3 (lower is better) Translates to: LTQPFVLENFRV*PPGQGTTSPSP Trigger: TGGTGATGGGCTAGTAGTGCCCTGACCTGGAGGTCAGACCCTGAAATTCTCAAGCACAAAAGGCTGTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR CCA 72 bp | ATTTCTCAGACTAAAGGACAGGAACTGACCTGTGTGTaGGGACACACTCCACAGGACCTCCACCATCAGACA | + |
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Preference number: 3 (lower is better) Translates to: ISQTKGQELTCV*GHTPQDLHHQT Trigger: TGTCTGATGGTGGAGGTCCTGTGGAGTGTGTCCCCACACACAGGTCAGTTCCTGTCCTTTAGTCTGAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR CCA 72 bp | CCAAAGCATGCACCAGCTCCTGGACAGACTAGCTGGTaGGCTTCTAGAAACTTCCAGTGTCCTGAATTAAGG | + |
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Preference number: 3 (lower is better) Translates to: PKHAPAPGQTSW*ASRNFQCPELR Trigger: CCTTAATTCAGGACACTGGAAGTTTCTAGAAGCCCACCAGCTAGTCTGTCCAGGAGCTGGTGCATGCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR CAA 90 bp | CATGCTCTAAGCAAACTTACAAAGAACTTGAAGGTTTGCAATGATTCGGTGCACTCGCTGCCAGCACTGTaGATCTGGGACAACCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: HALSKLTKNLKVCNDSVHSLPAL*IWDNPS Trigger: ACTGGGGTTGTCCCAGATCAACAGTGCTGGCAGCGA...GTGCACCGAATCATTGCAAACCTTCAAGTTCTTTGTAAGTTTGCTTAGAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR TCA 72 bp | CCTGGAGTCTTACAAAACTGTATGTCATGTGCCTGTTaGGTTCTGCTTGGGAGAACGTGCATCTTATCGGTC | + |
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Preference number: 3 (lower is better) Translates to: PGVLQNCMSCAC*VLLGRTCILSV Trigger: GACCGATAAGATGCACGTTCTCCCAAGCAGAACTCAACAGGCACATGACATACAGTTTTGTAAGACTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR TCA 72 bp | CAGGCTCTCAAGCTTTTGAGGCAGCCCTTTATCAACTaGGCCATCTTCCTAGTTCCAGATTGGTTTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: QALKLLRQPFIN*AIFLVPDWFSG Trigger: TCCAGAAAACCAATCTGGAACTAGGAAGATGGCTCAGTTGATAAAGGGCTGCCTCAAAAGCTTGAGAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 72 bp | AAAAAGGCTTGGTATTACAGAAAGTTTTCAGACCTCTaGGCAGAGAGGAAAGAGGTAGATGGAGGCCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: KKAWYYRKFSDL*AERKEVDGGQR Trigger: CCTCTGGCCTCCATCTACCTCTTTCCTCTCTGCTCAGAGGTCTGAAAACTTTCTGTAATACCAAGCCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR GCA 72 bp | AGCAGGCCATCACCAGAGCTGGTTATATTTCAGGTGTaGAGTCTCTCCTTCCTTGTATGTAAATTGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SRPSPELVIFQV*SLSFLVCKLFP Trigger: TGGGAACAATTTACATACAAGGAAGGAGAGACTGCACACCTGAAATATAACCAGCTCTGGTGATGGCCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR CCA 72 bp | ATGATTTGGAGCTCATTAGTGCCAAAGACACCAAGCTaGAAACAGTTCCCAGTGGGTTTCTCTCACCAACTT | + |
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Preference number: 3 (lower is better) Translates to: MIWSSLVPKTPS*KQFPVGFSHQL Trigger: AAGTTGGTGAGAGAAACCCACTGGGAACTGTTTCCAGCTTGGTGTCTTTGGCACTAATGAGCTCCAAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR GCA 72 bp | TCTTACAAAACTGTATGTCATGTGCCTGTTGAGTTCTaGTTGGGAGAACGTGCATCTTATCGGTCAGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: SYKTVCHVPVEF*LGERASYRSVR Trigger: CCTTACTGACCGATAAGATGCACGTTCTCCCAAGCAGAACTCAACAGGCACATGACATACAGTTTTGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| 3UTR CCA 72 bp | TGGAGCATTTCCAAACTCTATGATCTCTGGTGTTTGTaGCCAGGGCACCATAATGTCTTTGTCCTTTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: WSISKLYDLWCL*PGHHNVFVLCS Trigger: AGAACAAAGGACAAAGACATTATGGTGCCCTGGCCACAAACACCAGAGATCATAGAGTTTGGAAATGCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 72 bp | GTCTTTGTCCTTTGTTCTTTCCTGAGGGTAACACATTaGGAGTTAAGGAGTGTCAGTTTCAGGCTCACTTGT | + |
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Preference number: 3 (lower is better) Translates to: VFVLCSFLRVTH*ELRSVSFRLTC Trigger: ACAAGTGAGCCTGAAACTGACACTCCTTAACTCTCAATGTGTTACCCTCAGGAAAGAACAAAGGACAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 72 bp | TGGGCTTCTAGAAACTTCCAGTGTCCTGAATTAAGGTaGAAGGACTCCATCCTGAGAAAAGCAAGTATGTTC | + |
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Preference number: 3 (lower is better) Translates to: WASRNFQCPELR*KDSILRKASMF Trigger: GAACATACTTGCTTTTCTCAGGATGGAGTCCTTTCACCTTAATTCAGGACACTGGAAGTTTCTAGAAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR CCA 72 bp | CAACTGAGCCATCTTCCTAGTTCCAGATTGGTTTTCTaGAGCATTTCCAAACTCTATGATCTCTGGTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: QLSHLPSSRLVF*SISKLYDLWCL Trigger: CAAACACCAGAGATCATAGAGTTTGGAAATGCTCCAGAAAACCAATCTGGAACTAGGAAGATGGCTCAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR CAA 90 bp | TGCAATCCCACCTCAATTCTGAATTTTCATGATTTGGAGCTCATTAGTGCCAAACCTGTTGAGTTCTGCTaGGGAGAACGTGCATCTTAT | + |
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Preference number: 3 (lower is better) Translates to: CNPTSILNFHDLELISAKPVEFC*GERASY Trigger: ATAAGATGCACGTTCTCCCAAGCAGAACTCAACAGG...TTTGGCACTAATGAGCTCCAAATCATGAAAATTCAGAATTGAGGTGGGATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 72 bp | CAGATTCATTTGGTGAATAATTCAAGGAGAAAGATTTaGCTTGGGCCATGCTTCATGTCTCCCATGACACAC | + |
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Preference number: 3 (lower is better) Translates to: QIHLVNNSRRKI*LGPCFMSPMTH Trigger: GTGTGTCATGGGAGACATGAAGCATGGCCCAAGTCAAATCTTTCTCCTTGAATTATTCACCAAATGAATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR-3UTR CAA 90 bp | CTGGTTATATTTCAGGTGTGCAGTCTCTCCTTCCTTGTATGTAAATTGTTCCCATTCAAGGAGAAAGATTaGACTTGGGCCATGCTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LVIFQVCSLSFLVCKLFPFKEKD*TWAMLH Trigger: ATGAAGCATGGCCCAAGTCAAATCTTTCTCCTTGAA...TGGGAACAATTTACATACAAGGAAGGAGAGACTGCACACCTGAAATATAACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| 3UTR TCA 72 bp | TGTGGACAATTAGAAATAACGTCTGTTTTATTTAACTaGATAGGTCAGCTCAAGAACTTTGGGAAGGTCATG | + |
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Preference number: 3 (lower is better) Translates to: CGQLEITSVLFN*IGQLKNFGKVM Trigger: CATGACCTTCCCAAAGTTCTTGAGCTGACCTATTCAGTTAAATAAAACAGACGTTATTTCTAATTGTCCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS-3UTR TCA 90 bp | AGCAGAGAGGAAAGAGGTAGATGGAGGCCAGAGGAGGGGGATTCATCCTCCAGCGTCCAGCTCCTTCCCTaGCGCGTTGACAAGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SREERGRWRPEEGDSSSSVQLLP*RVDKQS Trigger: GCTCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGAC...GCTGGAGGATGAATCCCCCTCCTCTGGCCTCCATCTACCTCTTTCCTCTCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS-3UTR GCA 90 bp | AGGCCATTACCCATCAGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCCAGTGGGGTGCCCACTaGTGTCACCACTCCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RPLPIRKNVFPVKPSSCFQWGAH*CHHSKS Trigger: GCTCTTGGAGTGGTGACAGCAGTGGGCACCCCACTG...GAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCTGATGGGTAATGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS-3UTR TCA 90 bp | CCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCCAGCCTGAATCCTTACTACGTCCAGCTCCTTCCCTaGCGCGTTGACAAGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PSETILLLLLFSSLNPYYVQLLP*RVDKQS Trigger: GCTCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGAC...GTAGTAAGGATTCAGGCTGGAAAATAACAGAAGCAGGAGGATGGTTTCACTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS-3UTR TCA 90 bp | ACCTGTGTGTGGGGACACACTCCACAGGACCTCCACCATCAGACAACGGAAGTCTTTGTGAAAGGGAACTaGAATCCAGCAAGTCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TCVWGHTPQDLHHQTTEVFVKGN*NPASRI Trigger: GATACGACTTGCTGGATTTCAGTTCCCTTTCACAAA...GACTTCCGTTGTCTGATGGTGGAGGTCCTGTGGAGTGTGTCCCCACACACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| 3UTR CAA 72 bp | GTGCACTGGAACAATAAATTCCTCTTGCTTTTTGCATaGATCCCAGCTCCACGTGGTCCACTCAGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHWNNKFLLLFA*IPAPRGPLRGS Trigger: GGACCCCCTGAGTGGACCACGTGGAGCTGGGATCAATGCAAAAAGCAAGAGGAATTTATTGTTCCAGTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCCAGCCTGAATCCTTACTACACTGCATCTCGCCCATaGACTTGTCCAGCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSETILLLLLFSSLNPYYTASRP*TCPAPS Trigger: GGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGT...GTAGTAAGGATTCAGGCTGGAAAATAACAGAAGCAGGAGGATGGTTTCACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR GCA 90 bp | TGCACTGTCAGTTTAAGACACCAATTTCACCTCTGTTTTCTGGGATCTGTGACTCAGTGGGGTGCCCACTaGTGTCACCACTCCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTVSLRHQFHLCFLGSVTQWGAH*CHHSKS Trigger: GCTCTTGGAGTGGTGACAGCAGTGGGCACCCCACTG...AGTCACAGATCCCAGAAAACAGAGGTGAAATTGGTGTCTTAAACTGACAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | GGAGTGTCAGTTTCAGGCTCACTTGTGGCCTCTGGTCTCCAGCAGATTCATTTGTTCTCTGAAAGGCGGTaGACTTTCACTTCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVSVSGSLVASGLQQIHLFSERR*TFTSEA Trigger: TGCCTCTGAAGTGAAAGTCCACCGCCTTTCAGAGAA...CAAATGAATCTGCTGGAGACCAGAGGCCACAAGTGAGCCTGAAACTGACACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| CDS-3UTR TCA 90 bp | CCCATCAGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCAAATCTGGGAAGAATaGGAACCGGAAAGGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PIRKNVFPVKPSSCFCYFQIWEE*EPERPC Trigger: GCAAGGCCTTTCCGGTTCTCATTCTTCCCAGATTTG...AAAATAACAGAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCTGATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051408.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTTGTGGCCAGGGCACCATAATGTCTTTGTCCTTTGTTCTTTCCTGAGGCAAATCTGGGAAGACTaGTGTCTCTCCTTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WCLWPGHHNVFVLCSFLRQIWED*CLSFVL Trigger: GAGGACAAAGGAGAGACAGCAGTCTTCCCAGATTTG...CCTCAGGAAAGAACAAAGGACAAAGACATTATGGTGCCCTGGCCACAAACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| CDS-3UTR TCA 90 bp | CCCATCAGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCAGCCATGCAAAAGATaGTCTTCTTCTGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PIRKNVFPVKPSSCFCYFQPCKR*SSSAGL Trigger: CAAGCCAGCAGAAGAAGATCATCTTTTGCATGGCTG...AAAATAACAGAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCTGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR TCA 90 bp | CATGCTCTAAGCAAACTTACAAAGAACTTGAAGGTTTGCAATGATTCGGTGCACACTGCATCTCGCCCATaGACTTGTCCAGCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HALSKLTKNLKVCNDSVHTASRP*TCPAPS Trigger: GGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGT...GTGCACCGAATCATTGCAAACCTTCAAGTTCTTTGTAAGTTTGCTTAGAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCATTACCCATCAGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCCAACCCAGAATGAGGTaGTATAGTTTTCGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPLPIRKNVFPVKPSSCFQPRMR*YSFRFV Trigger: CACAAAACGAAAACTATACCACCTCATTCTGGGTTG...GAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCTGATGGGTAATGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | CCCATCAGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTAGGCTGTCCCCACCATaGTTAAGACGACAAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PIRKNVFPVKPSSCFCYFRLSPP*LRRQES Trigger: TGATTCTTGTCGTCTTAACCATGGTGGGGACAGCCT...AAAATAACAGAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCTGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 |
||
| 3UTR CAA 72 bp | CCCTGGAGTCTTACAAAACTGTATGTCATGTGCCTGTaGAGTTCTGCTTGGGAGAACGTGCATCTTATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PWSLTKLYVMCL*SSAWENVHLIG Trigger: ACCGATAAGATGCACGTTCTCCCAAGCAGAACTCAACAGGCACATGACATACAGTTTTGTAAGACTCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR TCA 90 bp | AGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCCAGCCTTTGTGAAAGGGAACTaGAATCCAGCAAGTCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RKNVFPVKPSSCFCYFPAFVKGN*NPASRI Trigger: GATACGACTTGCTGGATTTCAGTTCCCTTTCACAAA...GGCTGGAAAATAACAGAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR GCA 90 bp | TACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTAAATCAGTGGGGTGCCCACTaGTGTCACCACTCCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YMLCKHNIRRAWYLRSLNQWGAH*CHHSKS Trigger: GCTCTTGGAGTGGTGACAGCAGTGGGCACCCCACTG...ATTTAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| 3UTR CAA 72 bp | CTCCACAGGACCTCCACCATCAGACAACGGAAGTCCTaGTCACCTCATTCCTTAAAGACCAATCAGTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHRTSTIRQRKS*SPHSLKTNQFK Trigger: TTTAAACTGATTGGTCTTTAAGGAATGAGGTGACAAGGACTTCCGTTGTCTGATGGTGGAGGTCCTGTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR TCA 90 bp | AATCCTTACTACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAACTGCATCTCGCCCATaGACTTGTCCAGCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPYYMLCKHNIRRAWYLRTASRP*TCPAPS Trigger: GGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGT...TCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTAGTAAGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | AGCAAACTTACAAAGAACTTGAAGGTTTGCAATGATTCGGTGCACTGTCAGTTTCTTACGCCTTCTCCGTaGAAAAGGCCATACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SKLTKNLKVCNDSVHCQFLTPSP*KRPYCI Trigger: GATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAG...AAACTGACAGTGCACCGAATCATTGCAAACCTTCAAGTTCTTTGTAAGTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | CTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTAAATGCACAGCTTACGCCTTCTCCGTaGAAAAGGCCATACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LCKHNIRRAWYLRSLNAQLTPSP*KRPYCI Trigger: GATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAG...CTGTGCATTTAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | CCCATCAGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCAACCCAGAATGAGGTaGTATAGTTTTCGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIRKNVFPVKPSSCFCYFQPRMR*YSFRFV Trigger: CACAAAACGAAAACTATACCACCTCATTCTGGGTTG...AAAATAACAGAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCTGATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | CCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCCAGCCTGAATCCTTACTACCAACCCAGAATGAGGTaGTATAGTTTTCGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSETILLLLLFSSLNPYYQPRMR*YSFRFV Trigger: CACAAAACGAAAACTATACCACCTCATTCTGGGTTG...GTAGTAAGGATTCAGGCTGGAAAATAACAGAAGCAGGAGGATGGTTTCACTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| 3UTR CAA 72 bp | CACTGCAATCCCACCTCAATTCTGAATTTTCATGATTaGGAGCTCATTAGTGCCAAAGACACCAAGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCNPTSILNFHD*ELISAKDTKLE Trigger: TTCCAGCTTGGTGTCTTTGGCACTAATGAGCTCCAAATCATGAAAATTCAGAATTGAGGTGGGATTGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| 3UTR CAA 72 bp | TGTCTTTGTCCTTTGTTCTTTCCTGAGGGTAACACATaGAGAGTTAAGGAGTGTCAGTTTCAGGCTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLCPLFFPEGNT*RVKECQFQAHL Trigger: CAAGTGAGCCTGAAACTGACACTCCTTAACTCTCAATGTGTTACCCTCAGGAAAGAACAAAGGACAAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| 3UTR CAA 72 bp | GCCCTTTATCAACTGAGCCATCTTCCTAGTTCCAGATaGGTTTTCTGGAGCATTTCCAAACTCTATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALYQLSHLPSSR*VFWSISKLYDL Trigger: GAGATCATAGAGTTTGGAAATGCTCCAGAAAACCAATCTGGAACTAGGAAGATGGCTCAGTTGATAAAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| CDS-3UTR CCA 90 bp | TGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTAAATGCACAGATGCTTACGCCTTCTCCGTaGAAAAGGCCATACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CKHNIRRAWYLRSLNAQMLTPSP*KRPYCI Trigger: GATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAG...CATCTGTGCATTTAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| 3UTR CAA 72 bp | TTTCAGGTGTGCAGTCTCTCCTTCCTTGTATGTAAATaGTTCCCAAATGAAAATGTGTGTGTTCATGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQVCSLSFLVCK*FPNENVCVHEG Trigger: CCCCTCATGAACACACACATTTTCATTTGGGAACAATTTACATACAAGGAAGGAGAGACTGCACACCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| CDS-3UTR TCA 90 bp | TACTACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTACAGCCATGCAAAAGATaGTCTTCTTCTGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YYMLCKHNIRRAWYLRSLQPCKR*SSSAGL Trigger: CAAGCCAGCAGAAGAAGATCATCTTTTGCATGGCTG...TAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | TACTACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTATTCTCTGAAAGGCGGTaGACTTTCACTTCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YYMLCKHNIRRAWYLRSLFSERR*TFTSEA Trigger: TGCCTCTGAAGTGAAAGTCCACCGCCTTTCAGAGAA...TAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR TCA 90 bp | TACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTAAATCAGCCATGCAAAAGATaGTCTTCTTCTGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YMLCKHNIRRAWYLRSLNQPCKR*SSSAGL Trigger: CAAGCCAGCAGAAGAAGATCATCTTTTGCATGGCTG...ATTTAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CCA 90 bp | TACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTAAATAGGCTGTCCCCACCATaGTTAAGACGACAAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: YMLCKHNIRRAWYLRSLNRLSPP*LRRQES Trigger: TGATTCTTGTCGTCTTAACCATGGTGGGGACAGCCT...ATTTAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 |
||
| CDS-3UTR TCA 90 bp | TACTACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTATTTGTGAAAGGGAACTaGAATCCAGCAAGTCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: YYMLCKHNIRRAWYLRSLFVKGN*NPASRI Trigger: GATACGACTTGCTGGATTTCAGTTCCCTTTCACAAA...TAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| 3UTR CAA 72 bp | AGCTGGTTATATTTCAGGTGTGCAGTCTCTCCTTCCTaGTATGTAAATTGTTCCCAAATGAAAATGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWLYFRCAVSPS*YVNCSQMKMCV Trigger: CACACACATTTTCATTTGGGAACAATTTACATACAAGGAAGGAGAGACTGCACACCTGAAATATAACCAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| CDS GCA 90 bp | CCACAGGAGCATGAGAACCGGAAAGGCCTTGCTCCTAACCCACATTaGCTTACGCCTTCTCCGTGGAAAAGGCCATACTGCATCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PQEHENRKGLAPNPH*LTPSPWKRPYCISP Trigger: GGGCGAGATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATGCTCCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072551.7 |
||
| CDS-3UTR CAA 90 bp | ACCTGTGTGTGGGGACACACTCCACAGGACCTCCACCATCAGACAACGGAAGTCATCTCGCCCATGAACTaGTCCAGCTCCTTCCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TCVWGHTPQDLHHQTTEVISPMN*SSSFPD Trigger: GTCAGGGAAGGAGCTGGACAAGTTCATGGGCGAGAT...GACTTCCGTTGTCTGATGGTGGAGGTCCTGTGGAGTGTGTCCCCACACACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS TCA 90 bp | AAGGCCATACTGCATCTCGCCCATGAACTTGTCCAGCTCCTTCCCTaGCGCGTTGACAAGCAGAGCCCCTGTTTTGCAGAGGATAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KAILHLAHELVQLLP*RVDKQSPCFAEDSG Trigger: GCCACTATCCTCTGCAAAACAGGGGCTCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGTATGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS GCA 90 bp | CCTAACCCACATTGCCTTACGCCTTCTCCGTGGAAAAGGCCATACTaGATCTCGCCCATGAACTTGTCCAGCTCCTTCCCTGACGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PNPHCLTPSPWKRPY*ISPMNLSSSFPDAL Trigger: CAACGCGTCAGGGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS CCA 90 bp | CGGAAAGGCCTTGCTCCTAACCCACATTGCCTTACGCCTTCTCCGTaGAAAAGGCCATACTGCATCTCGCCCATGAACTTGTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKGLAPNPHCLTPSP*KRPYCISPMNLSSS Trigger: GGAGCTGGACAAGTTCATGGGCGAGATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS GCA 90 bp | TGTTTTGCAGAGGATAGTGGCTTTAACCCACAGTGGGGTGCCCACTaGTGTCACCACTCCAAGAGCACAGAGAAAGCTCAGTACGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CFAEDSGFNPQWGAH*CHHSKSTEKAQYAS Trigger: GCTGGCGTACTGAGCTTTCTCTGTGCTCTTGGAGTGGTGACAGCAGTGGGCACCCCACTGTGGGTTAAAGCCACTATCCTCTGCAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS GCA 90 bp | TCTGGGAAGAATGAGAACCGGAAAGGCCTTGCTCCTAACCCACATTaGCTTACGCCTTCTCCGTGGAAAAGGCCATACTGCATCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGKNENRKGLAPNPH*LTPSPWKRPYCISP Trigger: GGGCGAGATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATTCTTCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051408.8 |
||
| CDS CCA 90 bp | AAGCAGAGCCCCTGTTTTGCAGAGGATAGTGGCTTTAACCCACAGTaGGGTGCCCACTGCTGTCACCACTCCAAGAGCACAGAGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KQSPCFAEDSGFNPQ*GAHCCHHSKSTEKA Trigger: AGCTTTCTCTGTGCTCTTGGAGTGGTGACAGCAGTGGGCACCCCACTGTGGGTTAAAGCCACTATCCTCTGCAAAACAGGGGCTCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS GCA 90 bp | ATTGATCTTGATGAGAACCGGAAAGGCCTTGCTCCTAACCCACATTaGCTTACGCCTTCTCCGTGGAAAAGGCCATACTGCATCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IDLDENRKGLAPNPH*LTPSPWKRPYCISP Trigger: GGGCGAGATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATCAAGATCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| CDS TCA 90 bp | TCTCTGAAAGGCGGTGGACTTTCACTTCAGAGGCAAACAATATCATaGCAAGACAGCCACAGGAGCATGAGAACCGGAAAGGCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLKGGGLSLQRQTIS*QDSHRSMRTGKALL Trigger: GAGCAAGGCCTTTCCGGTTCTCATGCTCCTGTGGCTGTCTTGTCATGATATTGTTTGCCTCTGAAGTGAAAGTCCACCGCCTTTCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072551.7 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCCAGCCAGCAGAGCCCCTGTTTaGCAGAGGATAGTGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RKNVFPVKPSSCFCYFPASRAPV*QRIVAL Trigger: TAAAGCCACTATCCTCTGCAAAACAGGGGCTCTGCT...GGCTGGAAAATAACAGAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
||
| CDS-3UTR CAA 90 bp | TGGTGTTTGTGGCCAGGGCACCATAATGTCTTTGTCCTTTGTTCTTTCCTGAGGTCTCCTTCATTGATCTaGATGAGAACCGGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WCLWPGHHNVFVLCSFLRSPSLI*MRTGKA Trigger: GGCCTTTCCGGTTCTCATCAAGATCAATGAAGGAGA...CCTCAGGAAAGAACAAAGGACAAAGACATTATGGTGCCCTGGCCACAAACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| CDS-3UTR CAA 90 bp | TGGTGTTTGTGGCCAGGGCACCATAATGTCTTTGTCCTTTGTTCTTTCCTGAGGACTGCTGTCTCTCCTTaGTCCTCATACAGAGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WCLWPGHHNVFVLCSFLRTAVSP*SSYREY Trigger: GTACTCTCTGTATGAGGACAAAGGAGAGACAGCAGT...CCTCAGGAAAGAACAAAGGACAAAGACATTATGGTGCCCTGGCCACAAACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
||
| CDS CCA 90 bp | ATGGAGAAGAGAATAATATTGATGTGGATGCTTACGGGGATGGCTTaGACCAAATCTGGGAAGAATGAGAACCGGAAAGGCCTTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MEKRIILMWMLTGMA*TKSGKNENRKGLAP Trigger: AGGAGCAAGGCCTTTCCGGTTCTCATTCTTCCCAGATTTGGTCCAAGCCATCCCCGTAAGCATCCACATCAATATTATTCTCTTCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051408.8 |
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| CDS-3UTR CAA 90 bp | CTGAATCCTTACTACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAATCTCGCCCATGAACTaGTCCAGCTCCTTCCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: LNPYYMLCKHNIRRAWYLISPMN*SSSFPD Trigger: GTCAGGGAAGGAGCTGGACAAGTTCATGGGCGAGAT...TAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTAGTAAGGATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS-3UTR CAA 90 bp | AGGAAGAACGTCTTCCCAGTGAAACCATCCTCCTGCTTCTGTTATTTTCCAGCCGGTATAGTTTTCGTTTaGTGTTCTGTAGGCATAGGT | + |
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Preference number: 5 (lower is better) Translates to: RKNVFPVKPSSCFCYFPAGIVFV*CSVGIG Trigger: ACCTATGCCTACAGAACACAAAACGAAAACTATACC...GGCTGGAAAATAACAGAAGCAGGAGGATGGTTTCACTGGGAAGACGTTCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS CCA 90 bp | ATGGTTAAGACGACAAGAATCATGGAGAAGAGAATAATATTGATGTaGATGCTTACGGGGATGGCTTGGACCAAATCTGGGAAGACTGCT | + |
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Preference number: 5 (lower is better) Translates to: MVKTTRIMEKRIILM*MLTGMAWTKSGKTA Trigger: AGCAGTCTTCCCAGATTTGGTCCAAGCCATCCCCGTAAGCATCCACATCAATATTATTCTCTTCTCCATGATTCTTGTCGTCTTAACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS-3UTR CAA 90 bp | CTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTAAATGCACAGAGCAGAGCCCCTGTTTaGCAGAGGATAGTGGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: LCKHNIRRAWYLRSLNAQSRAPV*QRIVAL Trigger: TAAAGCCACTATCCTCTGCAAAACAGGGGCTCTGCT...CTGTGCATTTAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS-3UTR CAA 90 bp | AAAGACACCAAGCTGGAAACAGTTCCCAGTGGGTTTCTCTCACCAACTTGTCTAGGTATAGTTTTCGTTTaGTGTTCTGTAGGCATAGGT | + |
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Preference number: 5 (lower is better) Translates to: KDTKLETVPSGFLSPTCLGIVFV*CSVGIG Trigger: ACCTATGCCTACAGAACACAAAACGAAAACTATACC...TAGACAAGTTGGTGAGAGAAACCCACTGGGAACTGTTTCCAGCTTGGTGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CCA 90 bp | ATGGTTAAGACGACAAGAATCATGGAGAAGAGAATAATATTGATGTaGATGCTTACGGGGATGGCTTGGACCAAATCTGGGAAGAATGAG | + |
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Preference number: 5 (lower is better) Translates to: MVKTTRIMEKRIILM*MLTGMAWTKSGKNE Trigger: CTCATTCTTCCCAGATTTGGTCCAAGCCATCCCCGTAAGCATCCACATCAATATTATTCTCTTCTCCATGATTCTTGTCGTCTTAACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051408.8 |
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| CDS-3UTR CAA 90 bp | TACTACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTAAGCAGAGCCCCTGTTTaGCAGAGGATAGTGGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: YYMLCKHNIRRAWYLRSLSRAPV*QRIVAL Trigger: TAAAGCCACTATCCTCTGCAAAACAGGGGCTCTGCT...TAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS-3UTR CAA 90 bp | AGTTTAAGACACCAATTTCACCTCTGTTTTCTGGGATCTGTGACTATGTGGACAAGTACCTCTCCTTCATaGATCTTGATGAGAACCGGA | + |
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Preference number: 5 (lower is better) Translates to: SLRHQFHLCFLGSVTMWTSTSPS*ILMRTG Trigger: TCCGGTTCTCATCAAGATCAATGAAGGAGAGGTACT...TGTCCACATAGTCACAGATCCCAGAAAACAGAGGTGAAATTGGTGTCTTAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS TCA 90 bp | TGTTCTGTAGGCATAGGTCCCTTCTTTAAAATTTGCAATTTTCTCTaGAAGGCGGTGGACTTTCACTTCAGAGGCAAACAATATCATGAC | + |
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Preference number: 5 (lower is better) Translates to: CSVGIGPFFKICNFL*KAVDFHFRGKQYHD Trigger: GTCATGATATTGTTTGCCTCTGAAGTGAAAGTCCACCGCCTTTCAGAGAAAATTGCAAATTTTAAAGAAGGGACCTATGCCTACAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS-3UTR CAA 90 bp | CTGAATCCTTACTACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAGAGAAGAGAATAATATaGATGTGGATGCTTACGGGG | + |
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Preference number: 5 (lower is better) Translates to: LNPYYMLCKHNIRRAWYLEKRII*MWMLTG Trigger: CCCCGTAAGCATCCACATCAATATTATTCTCTTCTC...TAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTAGTAAGGATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 |
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| CDS-3UTR CAA 90 bp | CTGAATCCTTACTACATGCTCTGTAAACATAACATAAGGAGGGCTTGGTACTTAGGTATAGTTTTCGTTTaGTGTTCTGTAGGCATAGGT | + |
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Preference number: 5 (lower is better) Translates to: LNPYYMLCKHNIRRAWYLGIVFV*CSVGIG Trigger: ACCTATGCCTACAGAACACAAAACGAAAACTATACC...TAAGTACCAAGCCCTCCTTATGTTATGTTTACAGAGCATGTAGTAAGGATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS-3UTR CAA 90 bp | TGTAAACATAACATAAGGAGGGCTTGGTACTTAAGAAGTCTAAATGCACAGATGGAGAAGAGAATAATATaGATGTGGATGCTTACGGGG | + |
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Preference number: 5 (lower is better) Translates to: CKHNIRRAWYLRSLNAQMEKRII*MWMLTG Trigger: CCCCGTAAGCATCCACATCAATATTATTCTCTTCTC...CATCTGTGCATTTAGACTTCTTAAGTACCAAGCCCTCCTTATGTTATGTTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 |
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| CDS CAA 90 bp | TTGTCCAGCTCCTTCCCTGACGCGTTGACAAGCAGAGCCCCTGTTTaGCAGAGGATAGTGGCTTTAACCCACAGTGGGGTGCCCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSSSFPDALTSRAPV*QRIVALTHSGVPTA Trigger: AGCAGTGGGCACCCCACTGTGGGTTAAAGCCACTATCCTCTGCAAAACAGGGGCTCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS CAA 90 bp | ACGCCTTCTCCGTGGAAAAGGCCATACTGCATCTCGCCCATGAACTaGTCCAGCTCCTTCCCTGACGCGTTGACAAGCAGAGCCCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: TPSPWKRPYCISPMN*SSSFPDALTSRAPV Trigger: AACAGGGGCTCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGTATGGCCTTTTCCACGGAGAAGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS TCA 72 bp | CTGCATCTCGCCCATGAACTTGTCCAGCTCCTTCCCTaGCGCGTTGACAAGCAGAGCCCCTGTTTTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LHLAHELVQLLP*RVDKQSPCFAE Trigger: CTCTGCAAAACAGGGGCTCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS GCA 72 bp | GAGGATAGTGGCTTTAACCCACAGTGGGGTGCCCACTaGTGTCACCACTCCAAGAGCACAGAGAAAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: EDSGFNPQWGAH*CHHSKSTEKAQ Trigger: CTGAGCTTTCTCTGTGCTCTTGGAGTGGTGACAGCAGTGGGCACCCCACTGTGGGTTAAAGCCACTATCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS CCA 72 bp | CCCTGTTTTGCAGAGGATAGTGGCTTTAACCCACAGTaGGGTGCCCACTGCTGTCACCACTCCAAGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: PCFAEDSGFNPQ*GAHCCHHSKST Trigger: TGTGCTCTTGGAGTGGTGACAGCAGTGGGCACCCCACTGTGGGTTAAAGCCACTATCCTCTGCAAAACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS CAA 72 bp | TCGCCCATGAACTTGTCCAGCTCCTTCCCTGACGCGTaGACAAGCAGAGCCCCTGTTTTGCAGAGGATAGTG | + |
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Preference number: 6 (lower is better) Translates to: SPMNLSSSFPDA*TSRAPVLQRIV Trigger: CACTATCCTCTGCAAAACAGGGGCTCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGACAAGTTCATGGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS CAA 72 bp | CCGTGGAAAAGGCCATACTGCATCTCGCCCATGAACTaGTCCAGCTCCTTCCCTGACGCGTTGACAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PWKRPYCISPMN*SSSFPDALTSR Trigger: TCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGTATGGCCTTTTCCACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS GCA 72 bp | CATTGCCTTACGCCTTCTCCGTGGAAAAGGCCATACTaGATCTCGCCCATGAACTTGTCCAGCTCCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HCLTPSPWKRPY*ISPMNLSSSFP Trigger: AGGGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS GCA 72 bp | CATGAGAACCGGAAAGGCCTTGCTCCTAACCCACATTaGCTTACGCCTTCTCCGTGGAAAAGGCCATACTGC | + |
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Preference number: 6 (lower is better) Translates to: HENRKGLAPNPH*LTPSPWKRPYC Trigger: GCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072551.7 |
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| CDS GCA 72 bp | GATGAGAACCGGAAAGGCCTTGCTCCTAACCCACATTaGCTTACGCCTTCTCCGTGGAAAAGGCCATACTGC | + |
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Preference number: 6 (lower is better) Translates to: DENRKGLAPNPH*LTPSPWKRPYC Trigger: GCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CAA 90 bp | TACTGCATCTCGCCCATGAACTTGTCCAGCTCCTTCCCTGACGCGTaGACAAGCAGAGCCCCTGTTTTGCAGAGGATAGTGGCTTTAACC | + |
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Preference number: 6 (lower is better) Translates to: YCISPMNLSSSFPDA*TSRAPVLQRIVALT Trigger: GGTTAAAGCCACTATCCTCTGCAAAACAGGGGCTCTGCTTGTCAACGCGTCAGGGAAGGAGCTGGACAAGTTCATGGGCGAGATGCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS CAA 90 bp | GGATGGCTTGGACCAAATCTGGGAAGAATGAGAACCGGAAAGGCCTaGCTCCTAACCCACATTGCCTTACGCCTTCTCCGTGGAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GWLGPNLGRMRTGKA*LLTHIALRLLRGKG Trigger: GCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATTCTTCCCAGATTTGGTCCAAGCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051408.8 |
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| CDS GCA 72 bp | AATGAGAACCGGAAAGGCCTTGCTCCTAACCCACATTaGCTTACGCCTTCTCCGTGGAAAAGGCCATACTGC | + |
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Preference number: 6 (lower is better) Translates to: NENRKGLAPNPH*LTPSPWKRPYC Trigger: GCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051408.8 |
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| CDS CCA 72 bp | CTTGCTCCTAACCCACATTGCCTTACGCCTTCTCCGTaGAAAAGGCCATACTGCATCTCGCCCATGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: LAPNPHCLTPSP*KRPYCISPMNL Trigger: CAAGTTCATGGGCGAGATGCAGTATGGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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| CDS CAA 90 bp | GAGAGTACCTCTCCTTCATTGATCTTGATGAGAACCGGAAAGGCCTaGCTCCTAACCCACATTGCCTTACGCCTTCTCCGTGGAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ESTSPSLILMRTGKA*LLTHIALRLLRGKG Trigger: GCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATCAAGATCAATGAAGGAGAGGTACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS GCA 72 bp | GCTTACGGGGATGGCTTGGACCAAATCTGGGAAGACTaGTGTCTCTCCTTTGTCCTCATACAGAGAGTACCT | + |
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Preference number: 6 (lower is better) Translates to: AYGDGLDQIWED*CLSFVLIQRVP Trigger: AGGTACTCTCTGTATGAGGACAAAGGAGAGACAGCAGTCTTCCCAGATTTGGTCCAAGCCATCCCCGTAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CAA 72 bp | TCTCCTTCATTGATCTTGATGAGAACCGGAAAGGCCTaGCTCCTAACCCACATTGCCTTACGCCTTCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: SPSLILMRTGKA*LLTHIALRLLR Trigger: ACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATCAAGATCAATGAAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CAA 72 bp | TGTCCTCATACAGAGAGTACCTCTCCTTCATTGATCTaGATGAGAACCGGAAAGGCCTTGCTCCTAACCCAC | + |
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Preference number: 6 (lower is better) Translates to: CPHTESTSPSLI*MRTGKALLLTH Trigger: GTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATCAAGATCAATGAAGGAGAGGTACTCTCTGTATGAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CAA 90 bp | CTGCTGTCTCTCCTTTGTCCTCATACAGAGAGTACCTCTCCTTCATaGATCTTGATGAGAACCGGAAAGGCCTTGCTCCTAACCCACATT | + |
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Preference number: 6 (lower is better) Translates to: LLSLLCPHTESTSPS*ILMRTGKALLLTHI Trigger: AATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATCAAGATCAATGAAGGAGAGGTACTCTCTGTATGAGGACAAAGGAGAGACAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CAA 90 bp | TCTCTCCTTTGTCCTCATACAGAGAGTACCTCTCCTTCATTGATCTaGATGAGAACCGGAAAGGCCTTGCTCCTAACCCACATTGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: SLLCPHTESTSPSLI*MRTGKALLLTHIAL Trigger: TAAGGCAATGTGGGTTAGGAGCAAGGCCTTTCCGGTTCTCATCAAGATCAATGAAGGAGAGGTACTCTCTGTATGAGGACAAAGGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CAA 72 bp | CTCCTTTGTCCTCATACAGAGAGTACCTCTCCTTCATaGATCTTGATGAGAACCGGAAAGGCCTTGCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LLCPHTESTSPS*ILMRTGKALLL Trigger: TAGGAGCAAGGCCTTTCCGGTTCTCATCAAGATCAATGAAGGAGAGGTACTCTCTGTATGAGGACAAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CAA 72 bp | GCTTGGACCAAATCTGGGAAGACTGCTGTCTCTCCTTaGTCCTCATACAGAGAGTACCTCTCCTTCATTGAT | + |
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Preference number: 6 (lower is better) Translates to: AWTKSGKTAVSP*SSYREYLSFID Trigger: ATCAATGAAGGAGAGGTACTCTCTGTATGAGGACAAAGGAGAGACAGCAGTCTTCCCAGATTTGGTCCAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CAA 90 bp | CCCACCATGGTTAAGACGACAAGAATCATGGAGAAGAGAATAATATaGATGTGGATGCTTACGGGGATGGCTTGGACCAAATCTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PTMVKTTRIMEKRII*MWMLTGMAWTKSGK Trigger: CTTCCCAGATTTGGTCCAAGCCATCCCCGTAAGCATCCACATCAATATTATTCTCTTCTCCATGATTCTTGTCGTCTTAACCATGGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 |
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| CDS CCA 72 bp | AGAATAATATTGATGTGGATGCTTACGGGGATGGCTTaGACCAAATCTGGGAAGACTGCTGTCTCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RIILMWMLTGMA*TKSGKTAVSPL Trigger: CAAAGGAGAGACAGCAGTCTTCCCAGATTTGGTCCAAGCCATCCCCGTAAGCATCCACATCAATATTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS CCA 72 bp | AGAATAATATTGATGTGGATGCTTACGGGGATGGCTTaGACCAAATCTGGGAAGAATGAGAACCGGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: RIILMWMLTGMA*TKSGKNENRKG Trigger: GCCTTTCCGGTTCTCATTCTTCCCAGATTTGGTCCAAGCCATCCCCGTAAGCATCCACATCAATATTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051408.8 |
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| CDS CAA 72 bp | GAGAATAATATTGATGTGGATGCTTACGGGGATGGCTaGGACCAAATCTGGGAAGACTGCTGTCTCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ENNIDVDAYGDG*DQIWEDCCLSF Trigger: AAAGGAGAGACAGCAGTCTTCCCAGATTTGGTCCAAGCCATCCCCGTAAGCATCCACATCAATATTATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055636.13 |
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| CDS TCA 72 bp | GGCATAGGTCCCTTCTTTAAAATTTGCAATTTTCTCTaGAAGGCGGTGGACTTTCACTTCAGAGGCAAACAA | + |
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Preference number: 6 (lower is better) Translates to: GIGPFFKICNFL*KAVDFHFRGKQ Trigger: TTGTTTGCCTCTGAAGTGAAAGTCCACCGCCTTTCAGAGAAAATTGCAAATTTTAAAGAAGGGACCTATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051408.8 ENSMUST00000055636.13 ENSMUST00000072551.7 |
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