Pregenerated sensors for CLPX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015357Ensembl transcript IDs: ENSMUST00000015501.11, ENSMUST00000113824.8, ENSMUST00000147279.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTaGGGAAACTGTTATGACCCTAAAGAACAGGGAAAGCTGTATGTA | + |
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Preference number: 1 (lower is better) Translates to: PCMISEIDSMPLMPD*GNCYDPKEQGKLYV Trigger: TACATACAGCTTTCCCTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR-3UTR GCA 90 bp | GAAACCAATGCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCACCTTTAATGCCAGACTaGGGAAACTGTTATGACCCT | + |
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Preference number: 2 (lower is better) Translates to: ETNASPLAEETRNINMSSPLMPD*GNCYDP Trigger: AGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGG...TGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGCATGTCGTCAAAATGTaGGTTTTCAAGGTATTCTTA | + |
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Preference number: 2 (lower is better) Translates to: SVTNGASWETNASPLAEEHVVKM*VFKVFL Trigger: TAAGAATACCTTGAAAACCCACATTTTGACGACATG...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGACTAATGGTGCCAGCTaGGAAACCAATGCCTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: DSKLCKISCLWPSKYLNQTNGAS*ETNASP Trigger: TGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGT...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGCCTTTAATGCCAGACTaGGGAAACTGTTATGACCCT | + |
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Preference number: 2 (lower is better) Translates to: LAEETRNINMSSKCGFSRPLMPD*GNCYDP Trigger: AGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGG...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGTATCTTAAAGGCTTTTaGCCATGTATGATATCCGAG | + |
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Preference number: 2 (lower is better) Translates to: DSKLCKISCLWPSKYLNQYLKGF*PCMISE Trigger: CTCGGATATCATACATGGTCAAAAGCCTTTAAGATA...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR CCA 72 bp | CATCAAGGGAATGCCTCTGTTACTAATGGTGCCAGCTaGGAAACCAATGCCTCTCCACTAGCTGAAGAGACC | + |
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Preference number: 3 (lower is better) Translates to: HQGNASVTNGAS*ETNASPLAEET Trigger: GGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGAGGCATTCCCTTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR TCA 72 bp | TGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTaGAGAGACCAGAAATATAAACATGTCGTCAAAATG | + |
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Preference number: 3 (lower is better) Translates to: WCQLGNQCLSTS*RDQKYKHVVKM Trigger: CATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR GCA 72 bp | ATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTaGGGAAACTGTTATGACCCTAAAGAACAGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: ISEIDSMPLMPD*GNCYDPKEQGK Trigger: CTTTCCCTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| 3UTR-3UTR CAA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGATTGCAACATCTGCATaGCTTAAGAGAATTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: DSKLCKISCLWPSKYLNQIATSA*LKRIPK Trigger: CTTAGGAATTCTCTTAAGCAATGCAGATGTTGCAAT...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGCCTCCTCTTTTCTCCTaGGGCATTTGCTGGTTTACC | + |
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Preference number: 4 (lower is better) Translates to: SVTNGASWETNASPLAEEPPLFS*GICWFT Trigger: GGTAAACCAGCAAATGCCTCAGGAGAAAAGAGGAGG...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGGGTGTTAGTGATGTCTaGTTCTCAGCCTCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SVTNGASWETNASPLAEEGVSDV*FSASAC Trigger: GCAAGCAGAGGCTGAGAAGCAGACATCACTAACACC...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | GCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGAAGATCCGCTGCAGCTaGAGCCCTTCTGCCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ASPLAEETRNINMSSKCGKIRCS*SPSALS Trigger: GGAAAGGGCAGAAGGGCTGCAGCTGCAGCGGATCTT...CCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | GCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGGTTAGCAAGATCCGCTaGAGCTGCAGCCCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ASPLAEETRNINMSSKCGVSKIR*SCSPSA Trigger: GGCAGAAGGGCTGCAGCTGCAGCGGATCTTGCTAAC...CCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGTTTGCAGCATCCGCTTaGCGAGGCCATCCATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQFAASA*RGHPSS Trigger: GGAGGATGGATGGCCTCGTCAAGCGGATGCTGCAAA...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGGTTAGCAAGATCCGCTaGAGCTGCAGCCCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQVSKIR*SCSPSA Trigger: GGCAGAAGGGCTGCAGCTGCAGCGGATCTTGCTAAC...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | GAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAATTTGCAGCATCCGCTTaGCGAGGCCATCCATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EIDSMPLMPDCGNCYDPKFAASA*RGHPSS Trigger: GGAGGATGGATGGCCTCGTCAAGCGGATGCTGCAAA...TTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGCCGTCCCACAAACTCTaGTATCATGCCAAACTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SVTNGASWETNASPLAEEPSHKL*YHAKLN Trigger: ATTGAGTTTGGCATGATACCAGAGTTTGTGGGACGG...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | GCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGGTTTGCCCCGTCTTTTaGGGCAAAGTATGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ASPLAEETRNINMSSKCGVCPVF*GKVCWC Trigger: ACACCAGCATACTTTGCCTCAAAAGACGGGGCAAAC...CCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGGAATGCCTGGCACACTaGCAATCTTATCTACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVTNGASWETNASPLAEEECLAH*QSYLLH Trigger: ATGAAGTAGATAAGATTGGCAGTGTGCCAGGCATTC...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | GAAACCAATGCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAGGGCCAATCTCGCTATaGCTTTCAGAGCATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETNASPLAEETRNINMSSGPISL*LSEHPQ Trigger: CTGAGGATGCTCTGAAAGCCATAGCGAGATTGGCCC...TGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | GCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGCACACTTATCCATGCTaGACAAGGCCTGATACTGAG | + |
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Preference number: 4 (lower is better) Translates to: ASPLAEETRNINMSSKCGHTYPC*TRPDTE Trigger: CTCAGTATCAGGCCTTGTTCAGCATGGATAAGTGTG...CCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGAGCCTGATTTCTTACTaGTTCCTTCAGTCACTGATT | + |
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Preference number: 4 (lower is better) Translates to: SVTNGASWETNASPLAEESLISY*FLQSLI Trigger: AATCAGTGACTGAAGGAAGCAGTAAGAAATCAGGCT...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | GCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTCTCAGCCTCTGCTTaGTGTCTCAGATTAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ASPLAEETRNINMSSKCGFSASA*CLRLAG Trigger: TCCAGCTAATCTGAGACAGCAAGCAGAGGCTGAGAA...CCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | GAAACCAATGCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAGGTGTTAGTGATGTCTaGTTCTCAGCCTCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ETNASPLAEETRNINMSSGVSDV*FSASAC Trigger: GCAAGCAGAGGCTGAGAAGCAGACATCACTAACACC...TGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | GAAACCAATGCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAGACCGAAGGCCTCGTaGACCTGTTTTTCTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ETNASPLAEETRNINMSSRPKAS*TCFSFQ Trigger: CTGGAAAGAAAAACAGGTGCACGAGGCCTTCGGTCT...TGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | GAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAATCTCTGGCTTCCACATaGCGGAGTAACCGGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: EIDSMPLMPDCGNCYDPKSLAST*RSNRSF Trigger: GAAAGACCGGTTACTCCGCCATGTGGAAGCCAGAGA...TTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTGTTTGCCCCGTCTTTTaGGGCAAAGTATGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: CMISEIDSMPLMPDCGNCVCPVF*GKVCWC Trigger: ACACCAGCATACTTTGCCTCAAAAGACGGGGCAAAC...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGCACACTTATCCATGCTaGACAAGGCCTGATACTGAG | + |
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Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQHTYPC*TRPDTE Trigger: CTCAGTATCAGGCCTTGTTCAGCATGGATAAGTGTG...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTAGACCGAAGGCCTCGTaGACCTGTTTTTCTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CMISEIDSMPLMPDCGNCRPKAS*TCFSFQ Trigger: CTGGAAAGAAAAACAGGTGCACGAGGCCTTCGGTCT...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGTTAGGACAGCGAAGCTaGTTTCCACCTTTCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQLGQRS*FPPFPE Trigger: TTCTGGGAAAGGTGGAAACCAGCTTCGCTGTCCTAA...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGTCTCTGGCTTCCACATaGCGGAGTAACCGGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LAEETRNINMSSKCGFSRSLAST*RSNRSF Trigger: GAAAGACCGGTTACTCCGCCATGTGGAAGCCAGAGA...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGGGGCCAATCTCGCTATaGCTTTCAGAGCATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LAEETRNINMSSKCGFSRGPISL*LSEHPQ Trigger: CTGAGGATGCTCTGAAAGCCATAGCGAGATTGGCCC...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGCCTCCTCTTTTCTCCTaGGGCATTTGCTGGTTTACC | + |
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Preference number: 4 (lower is better) Translates to: LAEETRNINMSSKCGFSRPPLFS*GICWFT Trigger: GGTAAACCAGCAAATGCCTCAGGAGAAAAGAGGAGG...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | GAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAATTCTCAGCCTCTGCTTaGTGTCTCAGATTAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: EIDSMPLMPDCGNCYDPKFSASA*CLRLAG Trigger: TCCAGCTAATCTGAGACAGCAAGCAGAGGCTGAGAA...TTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGCCTACATATCCAGCCTaGGTCAAAGTTGTACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQPTYPA*VKVVQS Trigger: TGACTGTACAACTTTGACCCAGGCTGGATATGTAGG...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGCTTTCCCAGGTTAGATaGTGTTCCAAAGCCGAGATA | + |
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Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQLSQVR*CSKAEI Trigger: TATCTCGGCTTTGGAACACCATCTAACCTGGGAAAG...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGCCGTCCCACAAACTCTaGTATCATGCCAAACTCAAT | + |
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Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQPSHKL*YHAKLN Trigger: ATTGAGTTTGGCATGATACCAGAGTTTGTGGGACGG...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGAATTATGCTTTTCTTTaGGTCTGCTTCCGACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQNYAFL*VCFRQH Trigger: GTGCTGTCGGAAGCAGACTCAAAGAAAAGCATAATT...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR TCA 90 bp | GAAACCAATGCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCATTTAATAAACCTTGCTaGACGCCTTCTCCACCTACA | + |
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Preference number: 4 (lower is better) Translates to: ETNASPLAEETRNINMSSFNKPC*TPSPPT Trigger: TGTAGGTGGAGAAGGCGTTCAGCAAGGTTTATTAAA...TGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR GCA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGCTGCTTCTCAGCCTCTaGTTGCTGTCTCAGATTAGC | + |
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Preference number: 4 (lower is better) Translates to: DSKLCKISCLWPSKYLNQLLLSL*LLSQIS Trigger: GCTAATCTGAGACAGCAAGCAGAGGCTGAGAAGCAG...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGTTAGGACAGCGAAGCTaGTTTCCACCTTTCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LAEETRNINMSSKCGFSRLGQRS*FPPFPE Trigger: TTCTGGGAAAGGTGGAAACCAGCTTCGCTGTCCTAA...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGTTCTTAGCAAACGACTaGCCAACAACATACTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQFLAND*PTTYLS Trigger: CGACAAGTATGTTGTTGGCCAGTCGTTTGCTAAGAA...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS-3UTR CCA 90 bp | GAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAACTTTCCCAGGTTAGATaGTGTTCCAAAGCCGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: EIDSMPLMPDCGNCYDPKLSQVR*CSKAEI Trigger: TATCTCGGCTTTGGAACACCATCTAACCTGGGAAAG...TTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGAATAACAGCATTCCGTaGCTCGGTCAGTATTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQNNSIP*LGQYLY Trigger: GTACAAATACTGACCGAGCCACGGAATGCTGTTATT...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR TCA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTAATTATGCTTTTCTTTaGGTCTGCTTCCGACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CMISEIDSMPLMPDCGNCNYAFL*VCFRQH Trigger: GTGCTGTCGGAAGCAGACTCAAAGAAAAGCATAATT...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR TCA 90 bp | GAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAATTTAATAAACCTTGCTaGACGCCTTCTCCACCTACA | + |
|
Preference number: 4 (lower is better) Translates to: EIDSMPLMPDCGNCYDPKFNKPC*TPSPPT Trigger: TGTAGGTGGAGAAGGCGTTCAGCAAGGTTTATTAAA...TTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTCTTTTCTGGAACATTaGCTATTGTGCCTTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASPLAEETRNINMSSKCGSFLEH*LLCLLE Trigger: TTCTAGAAGGCACAATAGTCAATGTTCCAGAAAAGA...CCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR TCA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGTTTGTTGTATCAACTTaGACTGTCTCTCCACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQFVVST*TVSPRS Trigger: ACTACGTGGAGAGACAGTTCAAGTTGATACAACAAA...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR GCA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTGAATGCCTGGCACACTaGCAATCTTATCTACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CMISEIDSMPLMPDCGNCECLAH*QSYLLH Trigger: ATGAAGTAGATAAGATTGGCAGTGTGCCAGGCATTC...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTCTCTACATTGTAATTaGCATCTTGGAGTAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASPLAEETRNINMSSKCGSLHCN*HLGVVW Trigger: CCAAACTACTCCAAGATGCCAATTACAATGTAGAGA...CCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR TCA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTTTGTTGTATCAACTTaGACTGTCTCTCCACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CMISEIDSMPLMPDCGNCFVVST*TVSPRS Trigger: ACTACGTGGAGAGACAGTTCAAGTTGATACAACAAA...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR GCA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTAGCCTGATTTCTTACTaGTTCCTTCAGTCACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CMISEIDSMPLMPDCGNCSLISY*FLQSLI Trigger: AATCAGTGACTGAAGGAAGCAGTAAGAAATCAGGCT...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGTTCTTAGCAAACGACTaGCCAACAACATACTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LAEETRNINMSSKCGFSRFLAND*PTTYLS Trigger: CGACAAGTATGTTGTTGGCCAGTCGTTTGCTAAGAA...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CCA 90 bp | GAAACCAATGCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCATCGAGAATTCTTTTCTaGAACATTGACTATTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETNASPLAEETRNINMSSSRILF*NIDYCA Trigger: GGCACAATAGTCAATGTTCCAGAAAAGAATTCTCGA...TGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGAATAACAGCATTCCGTaGCTCGGTCAGTATTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAEETRNINMSSKCGFSRNNSIP*LGQYLY Trigger: GTACAAATACTGACCGAGCCACGGAATGCTGTTATT...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGGCTTCCTTCAGTCACTaGTTTCTTATTTCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSKLCKISCLWPSKYLNQASFSH*FLISIS Trigger: GGAGATGGAAATAAGAAATCAGTGACTGAAGGAAGC...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR TCA 90 bp | GAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAATTATACACGGCAACTaGAAGCACTTTCTTAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EIDSMPLMPDCGNCYDPKIIHGN*KHFLSK Trigger: TTTGCTAAGAAAGTGCTTTCAGTTGCCGTGTATAAT...TTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR TCA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTATTATACACGGCAACTaGAAGCACTTTCTTAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CMISEIDSMPLMPDCGNCIIHGN*KHFLSK Trigger: TTTGCTAAGAAAGTGCTTTCAGTTGCCGTGTATAAT...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CCA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTCTCTACATTGTAATTaGCATCTTGGAGTAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CMISEIDSMPLMPDCGNCSLHCN*HLGVVW Trigger: CCAAACTACTCCAAGATGCCAATTACAATGTAGAGA...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGTCGAGAATTCTTTTCTaGAACATTGACTATTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSKLCKISCLWPSKYLNQSRILF*NIDYCA Trigger: GGCACAATAGTCAATGTTCCAGAAAAGAATTCTCGA...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS GCA 90 bp | ATGAGTGTTAGATTCCCCACTTCGGTTAGCAAGATCCGCTGCAGCTaGAGCCCTTCTGCCCTTTCCCAGGTTAGATGGTGTTCCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MSVRFPTSVSKIRCS*SPSALSQVRWCSKA Trigger: GGCTTTGGAACACCATCTAACCTGGGAAAGGGCAGAAGGGCTGCAGCTGCAGCGGATCTTGCTAACCGAAGTGGGGAATCTAACACTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS CCA 90 bp | CTGGTTTACCTGCTGCTGCATAGAGGCTCCCAAGGCATTGCCGTGTaGGCTGATCCCAGCGATCTGAAGCAACTTTGTAAATCTGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LVYLLLHRGSQGIAV*ADPSDLKQLCKSVL Trigger: GAGTACAGATTTACAAAGTTGCTTCAGATCGCTGGGATCAGCCCACACGGCAATGCCTTGGGAGCCTCTATGCAGCAGCAGGTAAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015501.11 |
||
| CDS-3UTR CAA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGCTTCTCAGCCTCTGCTaGCTGTCTCAGATTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVTNGASWETNASPLAEELLSLC*LSQISW Trigger: CCAGCTAATCTGAGACAGCAAGCAGAGGCTGAGAAG...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGTGTTTGCCCCGTCTTTaGAGGCAAAGTATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVTNGASWETNASPLAEECLPRL*RQSMLV Trigger: CACCAGCATACTTTGCCTCAAAAGACGGGGCAAACA...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGGTTTGCAGCATCCGCTaGACGAGGCCATCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASPLAEETRNINMSSKCGVCSIR*TRPSIL Trigger: GAGGATGGATGGCCTCGTCAAGCGGATGCTGCAAAC...CCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGGTTTGCAGCATCCGCTaGACGAGGCCATCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQVCSIR*TRPSIL Trigger: GAGGATGGATGGCCTCGTCAAGCGGATGCTGCAAAC...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS GCA 90 bp | CGCCTTCTCCACCTACATCCCGTAATTGATGAATGCCTGGCACACTaGCAATCTTATCTACTTCATCCAGAAAGACAATTCCTTGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLHLHPVIDECLAH*QSYLLHPERQFLVV Trigger: CACAACAAGGAATTGTCTTTCTGGATGAAGTAGATAAGATTGGCAGTGTGCCAGGCATTCATCAATTACGGGATGTAGGTGGAGAAGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGCTTCAGAGGACTCTTTaGAGGGTGCCCGAATGTATC | + |
|
Preference number: 5 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQLQRTL*RVPECI Trigger: GATACATTCGGGCACCCTCAAAAGAGTCCTCTGAAG...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTTACTAATGGTGCCAGCTGGGAAACCAATGCCTCTCCACTAGCTGAAGAGCAGAAAGACAATTCCTaGTTGTGCTTTCTCTACATT | + |
|
Preference number: 5 (lower is better) Translates to: SVTNGASWETNASPLAEEQKDNS*LCFLYI Trigger: AATGTAGAGAAAGCACAACAAGGAATTGTCTTTCTG...CTCTTCAGCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAACTTCAGAGGACTCTTTaGAGGGTGCCCGAATGTATC | + |
|
Preference number: 5 (lower is better) Translates to: EIDSMPLMPDCGNCYDPKLQRTL*RVPECI Trigger: GATACATTCGGGCACCCTCAAAAGAGTCCTCTGAAG...TTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGTGTTTGCCCCGTCTTTaGAGGCAAAGTATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAEETRNINMSSKCGFSRCLPRL*RQSMLV Trigger: CACCAGCATACTTTGCCTCAAAAGACGGGGCAAACA...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGCTTCTCAGCCTCTGCTaGCTGTCTCAGATTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSKLCKISCLWPSKYLNQLLSLC*LSQISW Trigger: CCAGCTAATCTGAGACAGCAAGCAGAGGCTGAGAAG...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGTTTCTCCTGAGGCATTaGCTGGTTTACCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSKLCKISCLWPSKYLNQFLLRH*LVYLLL Trigger: CAGCAGCAGGTAAACCAGCAAATGCCTCAGGAGAAA...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GAAACCAATGCCTCTCCACTAGCTGAAGAGACCAGAAATATAAACATGTCGTCATTCTTTTCTGGAACATaGACTATTGTGCCTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: ETNASPLAEETRNINMSSFFSGT*TIVPSR Trigger: TCTAGAAGGCACAATAGTCAATGTTCCAGAAAAGAA...TGACGACATGTTTATATTTCTGGTCTCTTCAGCTAGTGGAGAGGCATTGGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTTATGACCCTAAAGAACAGTTCTTTTCTGGAACATaGACTATTGTGCCTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: DSMPLMPDCGNCYDPKEQFFSGT*TIVPSR Trigger: TCTAGAAGGCACAATAGTCAATGTTCCAGAAAAGAA...CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS TCA 90 bp | TTAAAGGCACCAGATGCCACAAACAAGACATTTGTTGTATCAACTTaGACTGTCTCTCCACGTAGTTTTCGAGAATTCTTTTCTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LKAPDATNKTFVVST*TVSPRSFREFFSGT Trigger: TGTTCCAGAAAAGAATTCTCGAAAACTACGTGGAGAGACAGTTCAAGTTGATACAACAAATGTCTTGTTTGTGGCATCTGGTGCCTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | TGTATGATATCCGAGATAGATTCAATGCCTTTAATGCCAGACTGCGGAAACTGTCAGTTTTATATCATCTaGAGAAGAGTCCAACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: CMISEIDSMPLMPDCGNCQFYII*RRVQHF Trigger: GAAGTGTTGGACTCTTCTCAAGATGATATAAAACTG...ACAGTTTCCGCAGTCTGGCATTAAAGGCATTGAATCTATCTCGGATATCATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGTATCCTGGTTCCTTTTaGCCTTCTACTACTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LAEETRNINMSSKCGFSRYPGSF*PSTTSL Trigger: CAAAGAAGTAGTAGAAGGCAAAAAGGAACCAGGATA...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGAAGAGACCAGAAATATAAACATGTCGTCAAAATGTGGGTTTTCAAGGCAGTTTTATATCATCTaGAGAAGAGTCCAACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAEETRNINMSSKCGFSRQFYII*RRVQHF Trigger: GAAGTGTTGGACTCTTCTCAAGATGATATAAAACTG...CCTTGAAAACCCACATTTTGACGACATGTTTATATTTCTGGTCTCTTCAGCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCAAGCTCTGTAAGATTAGTTGCCTATGGCCTTCTAAATATTTAAATCAGTATCCTGGTTCCTTTTaGCCTTCTACTACTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSKLCKISCLWPSKYLNQYPGSF*PSTTSL Trigger: CAAAGAAGTAGTAGAAGGCAAAAAGGAACCAGGATA...CTGATTTAAATATTTAGAAGGCCATAGGCAACTAATCTTACAGAGCTTGCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS CCA 72 bp | CTGCTGCTGCATAGAGGCTCCCAAGGCATTGCCGTGTaGGCTGATCCCAGCGATCTGAAGCAACTCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLHRGSQGIAV*ADPSDLKQLSR Trigger: CCTAGAGAGTTGCTTCAGATCGCTGGGATCAGCCCACACGGCAATGCCTTGGGAGCCTCTATGCAGCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113824.8 ENSMUST00000147279.2 |
||
| CDS CCA 72 bp | TCCAAGGTCGTCCCCAGTCTTCCTAACACTGGCACATaGATTCGCCCACACGAAATACCTCTCTGCGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKVVPSLPNTGT*IRPHEIPLCAE Trigger: CTCCGCGCAGAGAGGTATTTCGTGTGGGCGAATCCATGTGCCAGTGTTAGGAAGACTGGGGACGACCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS TCA 72 bp | TCTGAAAAGGTTCTAAGAGGAGCTCTGCGCAGAGCCTaGGCGTCCAAGGTCGTCCCCAGTCTTCCTAACACT | + |
|
Preference number: 6 (lower is better) Translates to: SEKVLRGALRRA*ASKVVPSLPNT Trigger: AGTGTTAGGAAGACTGGGGACGACCTTGGACGCTCAGGCTCTGCGCAGAGCTCCTCTTAGAACCTTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS TCA 72 bp | CCCAAGGCATTGCCGTGTGGGCTGATCCCAGCGATCTaGAGCAACTCTCTAGGTGTTAGTGATGTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PKALPCGLIPAI*SNSLGVSDVCF Trigger: GAAGCAGACATCACTAACACCTAGAGAGTTGCTTCAGATCGCTGGGATCAGCCCACACGGCAATGCCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113824.8 ENSMUST00000147279.2 |
||
| CDS CCA 72 bp | CTGCTGCTGCATAGAGGCTCCCAAGGCATTGCCGTGTaGGCTGATCCCAGCGATCTGAAGCAACTTTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLHRGSQGIAV*ADPSDLKQLCK Trigger: TTTACAAAGTTGCTTCAGATCGCTGGGATCAGCCCACACGGCAATGCCTTGGGAGCCTCTATGCAGCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015501.11 |
||
| CDS GCA 72 bp | AGGTGGCTTCTGCTGGAATGCCAACTTCACAGCCTCTaGAGCGGACTCGGGTTCCTTAATTATGCTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RWLLLECQLHSL*SGLGFLNYAFL Trigger: AAGAAAAGCATAATTAAGGAACCCGAGTCCGCTGCAGAGGCTGTGAAGTTGGCATTCCAGCAGAAGCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
||
| CDS CCA 72 bp | CAAAGGAACCACCACAGGCAACCGTCCCACAAACTCTaGTATCATGCCAAACTCAATAAGATCTCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QRNHHRQPSHKL*YHAKLNKISGF Trigger: GAAGCCAGAGATCTTATTGAGTTTGGCATGATACCAGAGTTTGTGGGACGGTTGCCTGTGGTGGTTCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS CAA 72 bp | TTCCATCTCCGGAGCCATCCTTGTTTGCCCCGTCTTTaGAGGCAAAGTATGCTGGTGTTTCTGAAAAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FHLRSHPCLPRL*RQSMLVFLKRF Trigger: GAACCTTTTCAGAAACACCAGCATACTTTGCCTCAAAAGACGGGGCAAACAAGGATGGCTCCGGAGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS CAA 72 bp | CCACTCCAGAGTCATATTCCTCTTCAGAGGACTCTTTaGAGGGTGCCCGAATGTATCCTGGTTCCTTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: PLQSHIPLQRTL*RVPECILVPFC Trigger: GCAAAAAGGAACCAGGATACATTCGGGCACCCTCAAAAGAGTCCTCTGAAGAGGAATATGACTCTGGAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS CAA 72 bp | GTCACTGATTTCTTATTTCCATCTCCGGAGCCATCCTaGTTTGCCCCGTCTTTTGAGGCAAAGTATGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: VTDFLFPSPEPS*FAPSFEAKYAG Trigger: ACCAGCATACTTTGCCTCAAAAGACGGGGCAAACAAGGATGGCTCCGGAGATGGAAATAAGAAATCAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS CAA 90 bp | CTTCCTTCAGTCACTGATTTCTTATTTCCATCTCCGGAGCCATCCTaGTTTGCCCCGTCTTTTGAGGCAAAGTATGCTGGTGTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LPSVTDFLFPSPEPS*FAPSFEAKYAGVSE Trigger: TTCAGAAACACCAGCATACTTTGCCTCAAAAGACGGGGCAAACAAGGATGGCTCCGGAGATGGAAATAAGAAATCAGTGACTGAAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS CCA 72 bp | GAACAAGGCCTGATACTGAGGAATAACAGCATTCCGTaGCTCGGTCAGTATTTGTACAAGTGTCTTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: EQGLILRNNSIP*LGQYLYKCLLI Trigger: GATGAGAAGACACTTGTACAAATACTGACCGAGCCACGGAATGCTGTTATTCCTCAGTATCAGGCCTTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS CAA 72 bp | CTGATTTCTTATTTCCATCTCCGGAGCCATCCTTGTTaGCCCCGTCTTTTGAGGCAAAGTATGCTGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LISYFHLRSHPC*PRLLRQSMLVF Trigger: AAACACCAGCATACTTTGCCTCAAAAGACGGGGCAAACAAGGATGGCTCCGGAGATGGAAATAAGAAATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS CAA 90 bp | TCAGAGGACTCTTTTGAGGGTGCCCGAATGTATCCTGGTTCCTTTTaGCCTTCTACTACTTCTTTGTCAACTTCCACACATACAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: SEDSFEGARMYPGSF*PSTTSLSTSTHTMS Trigger: TGACATTGTATGTGTGGAAGTTGACAAAGAAGTAGTAGAAGGCAAAAAGGAACCAGGATACATTCGGGCACCCTCAAAAGAGTCCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS GCA 72 bp | CACCTTTCCCAGAATTCCCAGAGCCTGATTTCTTACTaGTTCCTTCAGTCACTGATTTCTTATTTCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: HLSQNSQSLISY*FLQSLISYFHL Trigger: GAGATGGAAATAAGAAATCAGTGACTGAAGGAAGCAGTAAGAAATCAGGCTCTGGGAATTCTGGGAAAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS CAA 90 bp | GGTGCCCGAATGTATCCTGGTTCCTTTTTGCCTTCTACTACTTCTTaGTCAACTTCCACACATACAATGTCAGAATTAGGAACTTCGAAC | + |
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Preference number: 6 (lower is better) Translates to: GARMYPGSFLPSTTS*STSTHTMSELGTSN Trigger: GTTCGAAGTTCCTAATTCTGACATTGTATGTGTGGAAGTTGACAAAGAAGTAGTAGAAGGCAAAAAGGAACCAGGATACATTCGGGCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS TCA 72 bp | CCAGATGCCACAAACAAGACATTTGTTGTATCAACTTaGACTGTCTCTCCACGTAGTTTTCGAGAATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PDATNKTFVVST*TVSPRSFREFF Trigger: AAAGAATTCTCGAAAACTACGTGGAGAGACAGTTCAAGTTGATACAACAAATGTCTTGTTTGTGGCATCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 |
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| CDS TCA 72 bp | ATTATATATTCTCTTATAATGATTATACACGGCAACTaGAAGCACTTTCTTAGCAAACGACTGGCCAACAAC | + |
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Preference number: 6 (lower is better) Translates to: IIYSLIMIIHGN*KHFLSKRLANN Trigger: GTTGTTGGCCAGTCGTTTGCTAAGAAAGTGCTTTCAGTTGCCGTGTATAATCATTATAAGAGAATATATAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015501.11 ENSMUST00000113824.8 ENSMUST00000147279.2 |
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