Pregenerated sensors for CLPTM1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021610Ensembl transcript IDs: ENSMUST00000022102.9
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTTGGGTaGCTGCCCACTGGCACAATCACCAAGACCCAAGTTCATGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: HWLPWDTHALRATLG*LPTGTITKTQVHVG Trigger: CCCCACATGAACTTGGGTCTTGGTGATTGTGCCAGTGGGCAGTCACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR GCA 90 bp | TACCCTTGCGTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATaGACTGAGAGCTACCCTTGGGTGACTGCCCACTGGCACAATCAC | + |
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Preference number: 1 (lower is better) Translates to: YPCVLRCPLAAMGHS*TESYPWVTAHWHNH Trigger: GTGATTGTGCCAGTGGGCAGTCACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCACGCAAGGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR TCA 90 bp | TTGCGTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGCACTaGGAGCTACCCTTGGGTGACTGCCCACTGGCACAATCACCAAGA | + |
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Preference number: 1 (lower is better) Translates to: LRAKVSTGCHGTLMH*ELPLGDCPLAQSPR Trigger: TCTTGGTGATTGTGCCAGTGGGCAGTCACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCACGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR GCA 90 bp | GCACTTGGACAAGCTGACGTGGAAATCCACCATGCTCCCTACCCTTaGGTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGCACT | + |
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Preference number: 1 (lower is better) Translates to: ALGQADVEIHHAPYP*VLRCPLAAMGHSCT Trigger: AGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCACGCAAGGGTAGGGAGCATGGTGGATTTCCACGTCAGCTTGTCCAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR CCA 90 bp | TGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTTaGGTGACTGCCCACTGGCACAATCACCAAGACCCAAGTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: CPLAAMGHSCTESYP*VTAHWHNHQDPSSC Trigger: ACATGAACTTGGGTCTTGGTGATTGTGCCAGTGGGCAGTCACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR CCA 90 bp | TGCCCACTGGCACAATCACCAAGACCCAAGTTCATGTGGGGTGTATaGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: CPLAQSPRPKFMWGV*LSAMVPSETREERV Trigger: CACCCTCTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAACTTGGGTCTTGGTGATTGTGCCAGTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR TCA 90 bp | GACTTTTGTGTATGTGAAATCCACATAAGGAGCACTTGGACAAGCTaGCGTGGAAATCCACCATGCTCCCTACCCTTGCGTGCTAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: DFCVCEIHIRSTWTS*RGNPPCSLPLRAKV Trigger: CACCTTAGCACGCAAGGGTAGGGAGCATGGTGGATTTCCACGTCAGCTTGTCCAAGTGCTCCTTATGTGGATTTCACATACACAAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTTGGGTGCAGTACAGTGCCGCCTaGGAGCCTGGGCCGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: RCPLAAMGHSCTESYPWVQYSAA*EPGPRC Trigger: GCATCTCGGCCCAGGCTCCCAGGCGGCACTGTACTG...CACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCCTACCCTTGCGTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGATGCTCAGAGGGATTTaGCAACGCAGAAGATGTGGT | + |
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Preference number: 2 (lower is better) Translates to: CSLPLRAKVSTGCHGTLMMLRGI*QRRRCG Trigger: ACCACATCTTCTGCGTTGCCAAATCCCTCTGAGCAT...CATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCACGCAAGGGTAGGGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTAGGGATACTGAGAAATaGTCAGAGGGATTTGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: VLRCPLAAMGHSCTESYPRDTEK*SEGFGN Trigger: GTTGCCAAATCCCTCTGAGCATTTCTCAGTATCCCT...AGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAAAGAGCCATTTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTAGAGCTACCCTTGGGTaGCTGCCCACTGGCACAATC | + |
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Preference number: 2 (lower is better) Translates to: GKKSHLIPESVQNDFCVCRATLG*LPTGTI Trigger: GATTGTGCCAGTGGGCAGTCACCCAAGGGTAGCTCT...ACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAAATGGCTCTTTTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR-3UTR CCA 90 bp | TGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGAGGGTGCTCAGGGATGCAACGCAGAAGATGTaGTATCTAGGAATTTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: WLSAMVPSETREERVLRDATQKM*YLGIFP Trigger: CGGGAAAATTCCTAGATACCACATCTTCTGCGTTGC...ATCCCTGAGCACCCTCTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR GCA 72 bp | TTCCCGAAGCCCCCAGGAATACTCATGGCCCAACTGTaGTGTGCAGTACAGTGCCGCCTGGGAGCCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: FPKPPGILMAQL*CAVQCRLGAWA Trigger: GGCCCAGGCTCCCAGGCGGCACTGTACTGCACAGCACAGTTGGGCCATGAGTATTCCTGGGGGCTTCGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR GCA 72 bp | GTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATaGACTGAGAGCTACCCTTGGGTGACTGCCCACTGG | + |
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Preference number: 3 (lower is better) Translates to: VLRCPLAAMGHS*TESYPWVTAHW Trigger: CCAGTGGGCAGTCACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR TCA 72 bp | AAGGTGTCCACTGGCTGCCATGGGACACTCATGCACTaGGAGCTACCCTTGGGTGACTGCCCACTGGCACAA | + |
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Preference number: 3 (lower is better) Translates to: KVSTGCHGTLMH*ELPLGDCPLAQ Trigger: TTGTGCCAGTGGGCAGTCACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR GCA 72 bp | CAAGCTGACGTGGAAATCCACCATGCTCCCTACCCTTaGGTGCTAAGGTGTCCACTGGCTGCCATGGGACAC | + |
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Preference number: 3 (lower is better) Translates to: QADVEIHHAPYP*VLRCPLAAMGH Trigger: GTGTCCCATGGCAGCCAGTGGACACCTTAGCACGCAAGGGTAGGGAGCATGGTGGATTTCCACGTCAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR CCA 72 bp | TCATGCACTGAGAGCTACCCTTGGGTGACTGCCCACTaGCACAATCACCAAGACCCAAGTTCATGTGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: SCTESYPWVTAH*HNHQDPSSCGV Trigger: CACCCCACATGAACTTGGGTCTTGGTGATTGTGCCAGTGGGCAGTCACCCAAGGGTAGCTCTCAGTGCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR TCA 72 bp | GTATGTGAAATCCACATAAGGAGCACTTGGACAAGCTaGCGTGGAAATCCACCATGCTCCCTACCCTTGCGT | + |
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Preference number: 3 (lower is better) Translates to: VCEIHIRSTWTS*RGNPPCSLPLR Trigger: ACGCAAGGGTAGGGAGCATGGTGGATTTCCACGTCAGCTTGTCCAAGTGCTCCTTATGTGGATTTCACATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR GCA 72 bp | ACACGAGAAGAGAGGGTGCTCAGGGATACTGAGAAATaGTCAGAGGGATTTGGCAACGCAGAAGATGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: TREERVLRDTEK*SEGFGNAEDVV Trigger: TACCACATCTTCTGCGTTGCCAAATCCCTCTGAGCATTTCTCAGTATCCCTGAGCACCCTCTCTTCTCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| 3UTR CCA 72 bp | GCACAATCACCAAGACCCAAGTTCATGTGGGGTGTATaGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAA | + |
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Preference number: 3 (lower is better) Translates to: AQSPRPKFMWGV*LSAMVPSETRE Trigger: TTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAACTTGGGTCTTGGTGATTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | CATGCTCCCTACCCTTGCGTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCAAGGGCTGGATGCAGTTaGAGTCACCCGAGCACGGAC | + |
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Preference number: 4 (lower is better) Translates to: HAPYPCVLRCPLAAMGHSRAGCS*SHPSTD Trigger: GTCCGTGCTCGGGTGACTCCAACTGCATCCAGCCCT...TGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCACGCAAGGGTAGGGAGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | GTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTAGACCACATCATCTCTaGAACAGGCCAGCCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: VLRCPLAAMGHSCTESYPRPHHL*NRPAGG Trigger: CCCACCGGCTGGCCTGTTTCAGAGATGATGTGGTCT...AGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | CATGCTCCCTACCCTTGCGTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCAATGACCCAGCAGGTATaGACCACGTACACCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: HAPYPCVLRCPLAAMGHSMTQQV*TTYTRN Trigger: GTTCCTGGTGTACGTGGTGCATACCTGCTGGGTCAT...TGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCACGCAAGGGTAGGGAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | AGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTTGGGTGGTCCACATTGTTCTCTaGACCAAGGCTGGACCGTGT | + |
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Preference number: 4 (lower is better) Translates to: RCPLAAMGHSCTESYPWVVHIVL*TKAGPC Trigger: ACACGGTCCAGCCTTGGTGCAGAGAACAATGTGGAC...CACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | GTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTGTAGGACACAGTGAGTaGCAGCTCGGTGGTAGATCG | + |
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Preference number: 4 (lower is better) Translates to: VLRCPLAAMGHSCTESYPVGHSE*QLGGRS Trigger: CGATCTACCACCGAGCTGCCACTCACTGTGTCCTAC...AGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | GTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTTGCTCAGCTGGTCAATaGACAGGATGGGGAGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VLRCPLAAMGHSCTESYPCSAGQ*TGWGGS Trigger: ACTACCTCCCCATCCTGTTCATTGACCAGCTGAGCA...AGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGAGCCATTTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTGCGCAGCCGCCCCAATaGGATCTTGTCGTAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: GKKSHLIPESVQNDFCVCAQPPQ*DLVVGH Trigger: GTGTCCTACGACAAGATCTCATTGGGGCGGCTGCGC...ACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAAATGGCTCTTTTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | TGGTTCCTTCTGAAACACGAGAAGAGAGGGTGCTCAGGGATACTGAGAAATGCTGAGTACACGGCATCCTaGATGTGGATCCAGAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: WFLLKHEKRGCSGILRNAEYTAS*MWIQKR Trigger: GCGCTTCTGGATCCACATGCAGGATGCCGTGTACTC...AGCATTTCTCAGTATCCCTGAGCACCCTCTCTTCTCGTGTTTCAGAAGGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | TGCTCAGGGATACTGAGAAATGCTCAGAGGGATTTGGCAACGCAGAAGATGTGGATCTTCATGTACCGATaGACATCTGCAGGCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: CSGILRNAQRDLATQKMWIFMYR*TSAGRE Trigger: CTCCCTGCCTGCAGATGTGCATCGGTACATGAAGAT...CCACATCTTCTGCGTTGCCAAATCCCTCTGAGCATTTCTCAGTATCCCTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | TTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTGAAATCCACATAAGGGGCAGCTCCAACACCTaGAGGGATCAGCACCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LIPESVQNDFCVCEIHIRGSSNT*RDQHQQ Trigger: CTGCTGGTGCTGATCCCTGCAGGTGTTGGAGCTGCC...CCTTATGTGGATTTCACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | TTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTGAAATCCACATAAGGACGGCATCCTGCATGTaGATCCAGAAGCGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LIPESVQNDFCVCEIHIRTASCM*IQKRSR Trigger: GCGGCTGCGCTTCTGGATCCACATGCAGGATGCCGT...CCTTATGTGGATTTCACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | TGGTTCCTTCTGAAACACGAGAAGAGAGGGTGCTCAGGGATACTGAGAAATGCTTCGGCTTCTATCTGTTaGTGTGTAGCAGACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: WFLLKHEKRGCSGILRNASASIC*CVADSP Trigger: TGGGGAGTCTGCTACACAGCAACAGATAGAAGCCGA...AGCATTTCTCAGTATCCCTGAGCACCCTCTCTTCTCGTGTTTCAGAAGGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | TTCATGTGGGGTGTATGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGGTACCGATGCACATCTaGAGGCAGGGAGGAACCATC | + |
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Preference number: 4 (lower is better) Translates to: FMWGVWLSAMVPSETREEVPMHI*RQGGTI Trigger: GATGGTTCCTCCCTGCCTGCAGATGTGCATCGGTAC...CTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | TTCATGTGGGGTGTATGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGGAAAACCCGAACTGCTaGAGGGAGTACACGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: FMWGVWLSAMVPSETREEENPNC*REYTAS Trigger: GGATGCCGTGTACTCCCTGCAGCAGTTCGGGTTTTC...CTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | TTCATGTGGGGTGTATGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGACCCGGTTGCTCAGCTaGTCAATGAACAGGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: FMWGVWLSAMVPSETREETRLLS*SMNRMG Trigger: CCCCATCCTGTTCATTGACCAGCTGAGCAACCGGGT...CTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | TGCTCAGGGATACTGAGAAATGCTCAGAGGGATTTGGCAACGCAGAAGATGTGGATCTGCATCTTTTTCTaGAAACCCGAACTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CSGILRNAQRDLATQKMWICIFF*KPELLQ Trigger: CTGCAGCAGTTCGGGTTTTCAGAAAAAGATGCAGAT...CCACATCTTCTGCGTTGCCAAATCCCTCTGAGCATTTCTCAGTATCCCTGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | TGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGAGGGTGCTCAGGGATACTCCCCAAATTCATTaGCCCTGCTCTTATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: WLSAMVPSETREERVLRDTPQIH*PCSYPQ Trigger: CTGTGGATAAGAGCAGGGTCAATGAATTTGGGGAGT...ATCCCTGAGCACCCTCTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | TTCATGTGGGGTGTATGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGTCTGAAAACCCGAACTaGTGCAGGGAGTACACGGCA | + |
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Preference number: 4 (lower is better) Translates to: FMWGVWLSAMVPSETREESENPN*CREYTA Trigger: TGCCGTGTACTCCCTGCAGCAGTTCGGGTTTTCAGA...CTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | TTCATGTGGGGTGTATGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGTCTCTGCACCAAGGCTaGACCGTGTGGTGGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: FMWGVWLSAMVPSETREESLHQG*TVWWCK Trigger: TTTACACCACCACACGGTCCAGCCTTGGTGCAGAGA...CTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | TTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTGAAATCCACATAAGGGATGGGGCTTCCGCTTaGGCTGCTCCTCATAAGACT | + |
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Preference number: 4 (lower is better) Translates to: LIPESVQNDFCVCEIHIRDGASA*AAPHKT Trigger: AGTCTTATGAGGAGCAGCCCAAGCGGAAGCCCCATC...CCTTATGTGGATTTCACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | TGGTTCCTTCTGAAACACGAGAAGAGAGGGTGCTCAGGGATACTGAGAAATGCTACTGTCTTCCCAAGCTaGATCATCTTCATGTACCGA | + |
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Preference number: 4 (lower is better) Translates to: WFLLKHEKRGCSGILRNATVFPS*IIFMYR Trigger: TCGGTACATGAAGATGATTCAGCTTGGGAAGACAGT...AGCATTTCTCAGTATCCCTGAGCACCCTCTCTTCTCGTGTTTCAGAAGGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGAGCCATTTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTCTATGGGTACCAAACTaGAACACAGGTCTCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GKKSHLIPESVQNDFCVCLWVPN*NTGLKP Trigger: GGGCTTGAGACCTGTGTTTCAGTTTGGTACCCATAG...ACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAAATGGCTCTTTTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | TTCATGTGGGGTGTATGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGCTTTCCAAAGCTCAATaGCAGCTCCAACACCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FMWGVWLSAMVPSETREELSKAQ*QLQHLQ Trigger: CTGCAGGTGTTGGAGCTGCCATTGAGCTTTGGAAAG...CTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | GGGAAAAAGAGCCATTTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTGCAACGCCAGAGCACTaGTTTGGTAGACATTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: GKKSHLIPESVQNDFCVCATPEH*FGRHSN Trigger: ATTGGAATGTCTACCAAAGCAGTGCTCTGGCGTTGC...ACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAAATGGCTCTTTTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | TGCTCAGGGATACTGAGAAATGCTCAGAGGGATTTGGCAACGCAGAAGATGTGGAAGACAAGTACTTCATaGCCTGAGCATCATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: CSGILRNAQRDLATQKMWKTSTS*PEHHTS Trigger: AGAAGTATGATGCTCAGGCCATGAAGTACTTGTCTT...CCACATCTTCTGCGTTGCCAAATCCCTCTGAGCATTTCTCAGTATCCCTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | TGGTTCCTTCTGAAACACGAGAAGAGAGGGTGCTCAGGGATACTGAGAAATGCTACTTCATCTTGTAATTaGCAAAAAGCTGGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: WFLLKHEKRGCSGILRNATSSCN*QKAGAT Trigger: TGTTGCCCCAGCTTTTTGTCAATTACAAGATGAAGT...AGCATTTCTCAGTATCCCTGAGCACCCTCTCTTCTCGTGTTTCAGAAGGAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR GCA 90 bp | GGGAAAAAGAGCCATTTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTAAGAAGGTGAAAGGCTaGAACAAAGAAGGTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: GKKSHLIPESVQNDFCVCKKVKG*NKEGQC Trigger: GCATTGACCTTCTTTGTTGCAGCCTTTCACCTTCTT...ACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAAATGGCTCTTTTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | TTCATGTGGGGTGTATGGTTAAGTGCTATGGTTCCTTCTGAAACACGAGAAGAGGGTAGAATCCCAGCATaGTGTAGGAAAATATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FMWGVWLSAMVPSETREEGRIPA*CRKIYA Trigger: TGCATATATTTTCCTACATCATGCTGGGATTCTACC...CTCTTCTCGTGTTTCAGAAGGAACCATAGCACTTAACCATACACCCCACATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CCA 90 bp | TGGTTCCTTCTGAAACACGAGAAGAGAGGGTGCTCAGGGATACTGAGAAATGCTCTGTCCTTTCAAATTTaGAATCCACATCAAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WFLLKHEKRGCSGILRNALSFQI*NPHQSL Trigger: AAGACTTTGATGTGGATTCCAAATTTGAAAGGACAG...AGCATTTCTCAGTATCCCTGAGCACCCTCTCTTCTCGTGTTTCAGAAGGAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR TCA 90 bp | TTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTGAAATCCACATAAGGAAATCAAAAAGAAGGTaGAAGGCTGCAACAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIPESVQNDFCVCEIHIRKSKRR*KAATKK Trigger: CTTCTTTGTTGCAGCCTTTCACCTTCTTTTTGATTT...CCTTATGTGGATTTCACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CCA 90 bp | CACCAAGGCTGGACCGTGTGGTGGTGTAAACACTCAGCTGCAGTTTaGGCCGCAGGGCCAGATAGGGCTGGATGCAGTTGGAGTCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: HQGWTVWWCKHSAAV*AAGPDRAGCSWSHP Trigger: CGGGTGACTCCAACTGCATCCAGCCCTATCTGGCCCTGCGGCCCAAACTGCAGCTGAGTGTTTACACCACCACACGGTCCAGCCTTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 90 bp | AGTTGGAGTCACCCGAGCACGGACGGGTATAGACGATACCGTACATaGCCCAGCAGGTATGCACCACGTACACCAGGAACACGCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SWSHPSTDGYRRYRT*PSRYAPRTPGTRPP Trigger: TGGTGGGCGTGTTCCTGGTGTACGTGGTGCATACCTGCTGGGTCATGTACGGTATCGTCTATACCCGTCCGTGCTCGGGTGACTCCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 90 bp | GTACACGGCATCCTGCATGTGGATCCAGAAGCGCAGCCGCCCCAATaGGATCTTGTCGTAGGACACAGTGAGTGGCAGCTCGGTGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VHGILHVDPEAQPPQ*DLVVGHSEWQLGGR Trigger: TCTACCACCGAGCTGCCACTCACTGTGTCCTACGACAAGATCTCATTGGGGCGGCTGCGCTTCTGGATCCACATGCAGGATGCCGTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CAA 90 bp | TGCTCCCTACCCTTGCGTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGTCAGCACCAGCAGGCTaGTCTGTTCATCCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSLPLRAKVSTGCHGTLMSAPAG*SVHPAG Trigger: TCCTGCTGGATGAACAGACAAGCCTGCTGGTGCTGA...CATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCACGCAAGGGTAGGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CCA 90 bp | AGATCAGGTCCACATTGTTCTCTGCACCAAGGCTGGACCGTGTGGTaGTGTAAACACTCAGCTGCAGTTTGGGCCGCAGGGCCAGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSGPHCSLHQGWTVW*CKHSAAVWAAGPDR Trigger: CCTATCTGGCCCTGCGGCCCAAACTGCAGCTGAGTGTTTACACCACCACACGGTCCAGCCTTGGTGCAGAGAACAATGTGGACCTGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 90 bp | GGTCAGCCTTGGTCGCCAGTGAGAGACGGGTTCATCCAGGGCGTTTaGTGGCTTCTTCTCGGCTTCTATCTGTTGCTGTGTAGCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: GQPWSPVRDGFIQGV*WLLLGFYLLLCSRL Trigger: GAGTCTGCTACACAGCAACAGATAGAAGCCGAGAAGAAGCCATCAAACGCCCTGGATGAACCCGTCTCTCACTGGCGACCAAGGCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CAA 90 bp | AGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTTGGGTGAAGATCAGGTCCACATaGTTCTCTGCACCAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCPLAAMGHSCTESYPWVKIRST*FSAPRL Trigger: CAGCCTTGGTGCAGAGAACAATGTGGACCTGATCTT...CACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 90 bp | GGGGCTTCCGCTTGGGCTGCTCCTCATAAGACTCCCCAAATTCATTaGCCCTGCTCTTATCCACAGGGTAAAGCCACCGCTGGTAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GASAWAAPHKTPQIH*PCSYPQGKATAGKG Trigger: ACCTTTACCAGCGGTGGCTTTACCCTGTGGATAAGAGCAGGGTCAATGAATTTGGGGAGTCTTATGAGGAGCAGCCCAAGCGGAAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CAA 90 bp | AGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTTGGGTGCCATTCACAAAGCTGTaGATGAGCCAGGAGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: RCPLAAMGHSCTESYPWVPFTKL*MSQEYQ Trigger: TTGGTACTCCTGGCTCATCAACAGCTTTGTGAATGG...CACCCAAGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CAA 90 bp | CACGAGAAGAGAGGGTGCTCAGGGATACTGAGAAATGCTCAGAGGGATTTGGCAGTTCATCCAGGGCGTTaGATGGCTTCTTCTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HEKRGCSGILRNAQRDLAVHPGR*MASSRL Trigger: AAGCCGAGAAGAAGCCATCAAACGCCCTGGATGAAC...TGCCAAATCCCTCTGAGCATTTCTCAGTATCCCTGAGCACCCTCTCTTCTCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 90 bp | GGTTTATCACCATCAGGTCTTTCACCCGGTTGCTCAGCTGGTCAATaGACAGGATGGGGAGGTAGTGCACTGTCTTCCCAAGCTGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSPSGLSPGCSAGQ*TGWGGSALSSQAES Trigger: TGATTCAGCTTGGGAAGACAGTGCACTACCTCCCCATCCTGTTCATTGACCAGCTGAGCAACCGGGTGAAAGACCTGATGGTGATAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS GCA 90 bp | CACATCAAAGTCTTCCACGTTCAAGATCAGGTCCACATTGTTCTCTaGACCAAGGCTGGACCGTGTGGTGGTGTAAACACTCAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HIKVFHVQDQVHIVL*TKAGPCGGVNTQLQ Trigger: CTGCAGCTGAGTGTTTACACCACCACACGGTCCAGCCTTGGTGCAGAGAACAATGTGGACCTGATCTTGAACGTGGAAGACTTTGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CAA 90 bp | GTGCTAAGGTGTCCACTGGCTGCCATGGGACACTCATGCACTGAGAGCTACCCTGCTAAGAGATATAAGTaGGTGTCTACGAAAATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLRCPLAAMGHSCTESYPAKRYK*VSTKIP Trigger: GGGAATTTTCGTAGACACCAACTTATATCTCTTAGC...AGGGTAGCTCTCAGTGCATGAGTGTCCCATGGCAGCCAGTGGACACCTTAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS GCA 90 bp | CACTGTCTTCCCAAGCTGAATCATCTTCATGTACCGATGCACATCTaGAGGCAGGGAGGAACCATCAAAGACAAAGTCATCCACCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: HCLPKLNHLHVPMHI*RQGGTIKDKVIHHH Trigger: GTGATGGTGGATGACTTTGTCTTTGATGGTTCCTCCCTGCCTGCAGATGTGCATCGGTACATGAAGATGATTCAGCTTGGGAAGACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS GCA 90 bp | CTGAAACACAGGTCTCAAGCCCCTCCAGGCTACTGTAATTTTCAATaGCTTCTTCACTTTCCAAAGCTCAATGGCAGCTCCAACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKHRSQAPPGYCNFQ*LLHFPKLNGSSNTC Trigger: GCAGGTGTTGGAGCTGCCATTGAGCTTTGGAAAGTGAAGAAGGCATTGAAAATTACAGTAGCCTGGAGGGGCTTGAGACCTGTGTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CAA 90 bp | TGCTCAGGGATACTGAGAAATGCTCAGAGGGATTTGGCAACGCAGAAGATGTGGGACTCCCCAAATTCATaGACCCTGCTCTTATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CSGILRNAQRDLATQKMWDSPNS*TLLLST Trigger: TGTGGATAAGAGCAGGGTCAATGAATTTGGGGAGTC...CCACATCTTCTGCGTTGCCAAATCCCTCTGAGCATTTCTCAGTATCCCTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 90 bp | ACCACATGTACCTGTTTCCCATCTTGCCAGGGTAGAATCCCAGCATaGTGTAGGAAAATATATGCATACAGCGTCCCATTGTTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TTCTCFPSCQGRIPA*CRKIYAYSVPLFLV Trigger: AACAAGAAACAATGGGACGCTGTATGCATATATTTTCCTACATCATGCTGGGATTCTACCCTGGCAAGATGGGAAACAGGTACATGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 90 bp | TCATACTTCTCAGTCTTCCTCTCAGATTCACTATGGGTACCAAACTaGAACACAGGTCTCAAGCCCCTCCAGGCTACTGTAATTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SYFSVFLSDSLWVPN*NTGLKPLQATVIFN Trigger: ATTGAAAATTACAGTAGCCTGGAGGGGCTTGAGACCTGTGTTTCAGTTTGGTACCCATAGTGAATCTGAGAGGAAGACTGAGAAGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS-3UTR CAA 90 bp | GGGAAAAAGAGCCATTTGATCCCAGAGTCCGTACAGAACGACTTTTGTGTATGTGCATACAGCGTCCCATaGTTTCTTGTTTTCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GKKSHLIPESVQNDFCVCAYSVP*FLVFFG Trigger: ACCAAAGAAAACAAGAAACAATGGGACGCTGTATGC...ACATACACAAAAGTCGTTCTGTACGGACTCTGGGATCAAATGGCTCTTTTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CCA 90 bp | GGTGAAAGGCTGCAACAAAGAAGGTCAATGCTAAGAGATATAAGTTaGTGTCTACGAAAATTCCCTTCAATTCATCTGCATCTTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GERLQQRRSMLRDIS*CLRKFPSIHLHLFL Trigger: CAGAAAAAGATGCAGATGAATTGAAGGGAATTTTCGTAGACACCAACTTATATCTCTTAGCATTGACCTTCTTTGTTGCAGCCTTTCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CCA 72 bp | GTTTGGGCCGCAGGGCCAGATAGGGCTGGATGCAGTTaGAGTCACCCGAGCACGGACGGGTATAGACGATAC | + |
|
Preference number: 6 (lower is better) Translates to: VWAAGPDRAGCS*SHPSTDGYRRY Trigger: GTATCGTCTATACCCGTCCGTGCTCGGGTGACTCCAACTGCATCCAGCCCTATCTGGCCCTGCGGCCCAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS GCA 72 bp | GAAAACCCGAACTGCTGCAGGGAGTACACGGCATCCTaGATGTGGATCCAGAAGCGCAGCCGCCCCAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: ENPNCCREYTAS*MWIQKRSRPNE Trigger: CTCATTGGGGCGGCTGCGCTTCTGGATCCACATGCAGGATGCCGTGTACTCCCTGCAGCAGTTCGGGTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CCA 72 bp | TGGACCGTGTGGTGGTGTAAACACTCAGCTGCAGTTTaGGCCGCAGGGCCAGATAGGGCTGGATGCAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WTVWWCKHSAAV*AAGPDRAGCSW Trigger: CCAACTGCATCCAGCCCTATCTGGCCCTGCGGCCCAAACTGCAGCTGAGTGTTTACACCACCACACGGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CCA 72 bp | CCGAACTGCTGCAGGGAGTACACGGCATCCTGCATGTaGATCCAGAAGCGCAGCCGCCCCAATGAGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PNCCREYTASCM*IQKRSRPNEIL Trigger: CAAGATCTCATTGGGGCGGCTGCGCTTCTGGATCCACATGCAGGATGCCGTGTACTCCCTGCAGCAGTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CCA 72 bp | CCACATTGTTCTCTGCACCAAGGCTGGACCGTGTGGTaGTGTAAACACTCAGCTGCAGTTTGGGCCGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PHCSLHQGWTVW*CKHSAAVWAAG Trigger: CCCTGCGGCCCAAACTGCAGCTGAGTGTTTACACCACCACACGGTCCAGCCTTGGTGCAGAGAACAATGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 72 bp | CACCCGAGCACGGACGGGTATAGACGATACCGTACATaGCCCAGCAGGTATGCACCACGTACACCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: HPSTDGYRRYRT*PSRYAPRTPGT Trigger: TGTTCCTGGTGTACGTGGTGCATACCTGCTGGGTCATGTACGGTATCGTCTATACCCGTCCGTGCTCGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 72 bp | ATCCTGCATGTGGATCCAGAAGCGCAGCCGCCCCAATaGGATCTTGTCGTAGGACACAGTGAGTGGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILHVDPEAQPPQ*DLVVGHSEWQL Trigger: GAGCTGCCACTCACTGTGTCCTACGACAAGATCTCATTGGGGCGGCTGCGCTTCTGGATCCACATGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 72 bp | TGGTCGCCAGTGAGAGACGGGTTCATCCAGGGCGTTTaGTGGCTTCTTCTCGGCTTCTATCTGTTGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: WSPVRDGFIQGV*WLLLGFYLLLC Trigger: ACACAGCAACAGATAGAAGCCGAGAAGAAGCCATCAAACGCCCTGGATGAACCCGTCTCTCACTGGCGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 72 bp | CCATCAGGTCTTTCACCCGGTTGCTCAGCTGGTCAATaGACAGGATGGGGAGGTAGTGCACTGTCTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSGLSPGCSAGQ*TGWGGSALSSQ Trigger: TTGGGAAGACAGTGCACTACCTCCCCATCCTGTTCATTGACCAGCTGAGCAACCGGGTGAAAGACCTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CAA 72 bp | TTGGTCGCCAGTGAGAGACGGGTTCATCCAGGGCGTTaGATGGCTTCTTCTCGGCTTCTATCTGTTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVASERRVHPGR*MASSRLLSVAV Trigger: CACAGCAACAGATAGAAGCCGAGAAGAAGCCATCAAACGCCCTGGATGAACCCGTCTCTCACTGGCGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS GCA 72 bp | GTCTTCCACGTTCAAGATCAGGTCCACATTGTTCTCTaGACCAAGGCTGGACCGTGTGGTGGTGTAAACACT | + |
|
Preference number: 6 (lower is better) Translates to: VFHVQDQVHIVL*TKAGPCGGVNT Trigger: AGTGTTTACACCACCACACGGTCCAGCCTTGGTGCAGAGAACAATGTGGACCTGATCTTGAACGTGGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CAA 72 bp | ACATCAAAGTCTTCCACGTTCAAGATCAGGTCCACATaGTTCTCTGCACCAAGGCTGGACCGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSKSSTFKIRST*FSAPRLDRVVV Trigger: CACCACCACACGGTCCAGCCTTGGTGCAGAGAACAATGTGGACCTGATCTTGAACGTGGAAGACTTTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 72 bp | TCAGTCTTCCTCTCAGATTCACTATGGGTACCAAACTaGAACACAGGTCTCAAGCCCCTCCAGGCTACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SVFLSDSLWVPN*NTGLKPLQATV Trigger: TACAGTAGCCTGGAGGGGCTTGAGACCTGTGTTTCAGTTTGGTACCCATAGTGAATCTGAGAGGAAGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS GCA 72 bp | AATTCATCTGCATCTTTTTCTGAAAACCCGAACTGCTaGAGGGAGTACACGGCATCCTGCATGTGGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NSSASFSENPNC*REYTASCMWIQ Trigger: CTGGATCCACATGCAGGATGCCGTGTACTCCCTGCAGCAGTTCGGGTTTTCAGAAAAAGATGCAGATGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS TCA 72 bp | CTTGTAGGTAAAGGCCTTCCAAGGCAGGTGTGCCACTaGCTTCATCTTGTAATTGACAAAAAGCTGGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LVGKGLPRQVCH*LHLVIDKKLGQ Trigger: TTGCCCCAGCTTTTTGTCAATTACAAGATGAAGTCAGTGGCACACCTGCCTTGGAAGGCCTTTACCTACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CAA 72 bp | GCTGCAACAAAGAAGGTCAATGCTAAGAGATATAAGTaGGTGTCTACGAAAATTCCCTTCAATTCATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AATKKVNAKRYK*VSTKIPFNSSA Trigger: TGCAGATGAATTGAAGGGAATTTTCGTAGACACCAACTTATATCTCTTAGCATTGACCTTCTTTGTTGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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| CDS CCA 72 bp | CTGCAACAAAGAAGGTCAATGCTAAGAGATATAAGTTaGTGTCTACGAAAATTCCCTTCAATTCATCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LQQRRSMLRDIS*CLRKFPSIHLH Trigger: ATGCAGATGAATTGAAGGGAATTTTCGTAGACACCAACTTATATCTCTTAGCATTGACCTTCTTTGTTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022102.9 |
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