RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLPB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000001829

Ensembl transcript IDs: ENSMUST00000001884.14, ENSMUST00000106998.8, ENSMUST00000123870.8, ENSMUST00000209579.2

Found 439 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCAGTTAAGAGACAGGGCTAAGGCAGACCCGTGCCCACCTGTGTaGAGCCTGACTCCAGCCTTGCTCCCACAGCACCTTCTGTTATCT +
Preference number: 1 (lower is better)
Translates to: RQLRDRAKADPCPPV*SLTPALLPQHLLLS
Trigger: AGATAACAGAAGGTGCTGTGGGAGCAAGGCTGGAGTCAGGCTCCACACAGGTGGGCACGGGTCTGCCTTAGCCCTGTCTCTTAACTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 90 bp GGTCCCACCCCAGAGGAAGGCAGGAAGAGGGACCAGTCAGACCTATaGGTGCTCTACACTGGCTCAGTCACAAGCCTTGACTCTGACAGT +
Preference number: 1 (lower is better)
Translates to: GPTPEEGRKRDQSDL*VLYTGSVTSLDSDS
Trigger: ACTGTCAGAGTCAAGGCTTGTGACTGAGCCAGTGTAGAGCACCCATAGGTCTGACTGGTCCCTCTTCCTGCCTTCCTCTGGGGTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 90 bp CACAACCAAGAAAGGCAGGAGAGGGTGCTAGGCCTTGGAAAGGCATaGGGGCAAGGTGGATTGGTTGCCATGCCACAGCAAGGGGCCTTT +
Preference number: 1 (lower is better)
Translates to: HNQERQERVLGLGKA*GQGGLVAMPQQGAF
Trigger: AAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTCATGCCTTTCCAAGGCCTAGCACCCTCTCCTGCCTTTCTTGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 90 bp GCCTTGCTCCCACAGCACCTTCTGTTATCTAGACTGCCAGCCTGCTaGATGAGCCCCATCTCAGAGCTGAGGTGTTCACCTGGGACCATG +
Preference number: 1 (lower is better)
Translates to: ALLPQHLLLSRLPAC*MSPISELRCSPGTM
Trigger: CATGGTCCCAGGTGAACACCTCAGCTCTGAGATGGGGCTCATTCAGCAGGCTGGCAGTCTAGATAACAGAAGGTGCTGTGGGAGCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 90 bp CAGGAGGGCTCTACTCAGTCCTGTAGTGGTGATGGCTTCTGCAGATaGTGCAGAGTGACTTGCCAGGCCCTGCTGTGTCCTGCTGTCCTT +
Preference number: 1 (lower is better)
Translates to: QEGSTQSCSGDGFCR*CRVTCQALLCPAVL
Trigger: AAGGACAGCAGGACACAGCAGGGCCTGGCAAGTCACTCTGCATCATCTGCAGAAGCCATCACCACTACAGGACTGAGTAGAGCCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR GCA 90 bp CTGGTGAAAGCCACAGCCTGCAGATGGGGCAGGAGTGTGTGGCAATaGTACTTTCCTGGTCCTGTCACTCCCCATGCGTCTATGCTGTGT +
Preference number: 1 (lower is better)
Translates to: LVKATACRWGRSVWQ*YFPGPVTPHASMLC
Trigger: ACACAGCATAGACGCATGGGGAGTGACAGGACCAGGAAAGTAGCATTGCCACACACTCCTGCCCCATCTGCAGGCTGTGGCTTTCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 90 bp ATGCACTGTGGGATGTCCAGGCTGGTGAAAGCCACAGCCTGCAGATaGGGCAGGAGTGTGTGGCAATGCTACTTTCCTGGTCCTGTCACT +
Preference number: 1 (lower is better)
Translates to: MHCGMSRLVKATACR*GRSVWQCYFPGPVT
Trigger: AGTGACAGGACCAGGAAAGTAGCATTGCCACACACTCCTGCCCCATCTGCAGGCTGTGGCTTTCACCAGCCTGGACATCCCACAGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 90 bp GAGCTGTGGTGTGGAGGCTGTGAGTTGGCCCAGGACAGTCTACAGTaGCAGAACATGGAGGTGCAAGCAACGCCAAAGCATGAAGGAGCT +
Preference number: 1 (lower is better)
Translates to: ELWCGGCELAQDSLQ*QNMEVQATPKHEGA
Trigger: AGCTCCTTCATGCTTTGGCGTTGCTTGCACCTCCATGTTCTGCCACTGTAGACTGTCCTGGGCCAACTCACAGCCTCCACACCACAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR GCA 90 bp AACTCATCCCCAAGGTTTGGGTCAGCTCCAGCAGCAAGCAGGACCTaGACCACACTCTCATTGTGGCTGATGGATGCCACCATCAGTGCT +
Preference number: 1 (lower is better)
Translates to: NSSPRFGSAPAASRT*TTLSLWLMDATISA
Trigger: AGCACTGATGGTGGCATCCATCAGCCACAATGAGAGTGTGGTGCAGGTCCTGCTTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR GCA 90 bp CACAGTCACTACCCAGGGATGATTCTTCAGCCTCCACCTCCCAAGTaGTGGGACTACAAGAACGAGCCACCATGGACCACACCAACTACC +
Preference number: 1 (lower is better)
Translates to: HSHYPGMILQPPPPK*WDYKNEPPWTTPTT
Trigger: GGTAGTTGGTGTGGTCCATGGTGGCTCGTTCTTGTAGTCCCAGCACTTGGGAGGTGGAGGCTGAAGAATCATCCCTGGGTAGTGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 90 bp CTACTCAGTCCTGTAGTGGTGATGGCTTCTGCAGATGATGCAGAGTaGCTTGCCAGGCCCTGCTGTGTCCTGCTGTCCTTTATGGGTATG +
Preference number: 1 (lower is better)
Translates to: LLSPVVVMASADDAE*LARPCCVLLSFMGM
Trigger: CATACCCATAAAGGACAGCAGGACACAGCAGGGCCTGGCAAGTCACTCTGCATCATCTGCAGAAGCCATCACCACTACAGGACTGAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 90 bp AGTCACTACCCAGGGATGATTCTTCAGCCTCCACCTCCCAAGTGCTaGGACTACAAGAACGAGCCACCATGGACCACACCAACTACCTTT +
Preference number: 1 (lower is better)
Translates to: SHYPGMILQPPPPKC*DYKNEPPWTTPTTF
Trigger: AAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTCTTGTAGTCCCAGCACTTGGGAGGTGGAGGCTGAAGAATCATCCCTGGGTAGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR GCA 90 bp GACCTGCACCACACTCTCATTGTGGCTGATGGATGCCACCATCAGTaGTGTCCAGCCAAGTTTGTGTCTTGCATTGACATCTGCACCTTC +
Preference number: 1 (lower is better)
Translates to: DLHHTLIVADGCHHQ*CPAKFVSCIDICTF
Trigger: GAAGGTGCAGATGTCAATGCAAGACACAAACTTGGCTGGACAGCACTGATGGTGGCATCCATCAGCCACAATGAGAGTGTGGTGCAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR CCA 90 bp TCTTCTTCAGCCAGACTTGTTCTCCGCTGCATGTTTCTGAGCTTCTaGCCACACGTCAATGCTCTAGTGAGGACATGGAGTGGAGTGCAC +
Preference number: 1 (lower is better)
Translates to: SSSARLVLRCMFLSF*PHVNALVRTWSGVH
Trigger: GTGCACTCCACTCCATGTCCTCACTAGAGCATTGACGTGTGGCCAGAAGCTCAGAAACATGCAGCGGAGAACAAGTCTGGCTGAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 90 bp GCTGGCCTGGAACTTAGTATGCAGCACAAAGTAGCCTCAAACTTGTaGCAATCCTACCTCAACCTCCCAATTGCTGGGAGTCCAGGCACA +
Preference number: 1 (lower is better)
Translates to: AGLELSMQHKVASNL*QSYLNLPIAGSPGT
Trigger: TGTGCCTGGACTCCCAGCAATTGGGAGGTTGAGGTAGGATTGTCACAAGTTTGAGGCTACTTTGTGCTGCATACTAAGTTCCAGGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR GCA 90 bp TTCAAAAGTGTCACGATCACCGAAGAGCAGGGAAGACACAGAAACTaGCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACT +
Preference number: 1 (lower is better)
Translates to: FKSVTITEEQGRHRN*LGRHRGRRWKVECT
Trigger: AGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGGTGATCGTGACACTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 90 bp TCTCCTCTAGCTGCTTTCACAGTGATGTCCTGCCTTGTTCAGCCTTaGGAGGCAGCCAGCACTTACAAGTCAAACACTTTAGTTTCTTGG +
Preference number: 1 (lower is better)
Translates to: SPLAAFTVMSCLVQP*EAASTYKSNTLVSW
Trigger: CCAAGAAACTAAAGTGTTTGACTTGTAAGTGCTGGCTGCCTCTCAAGGCTGAACAAGGCAGGACATCACTGTGAAAGCAGCTAGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 90 bp TACACTGGCTCAGTCACAAGCCTTGACTCTGACAGTTGTAGGGCATaGGAAAGAGGTAGCTGTAGAATAAACTACAGAGCTACCTGTGCT +
Preference number: 1 (lower is better)
Translates to: YTGSVTSLDSDSCRA*ERGSCRINYRATCA
Trigger: AGCACAGGTAGCTCTGTAGTTTATTCTACAGCTACCTCTTTCCCATGCCCTACAACTGTCAGAGTCAAGGCTTGTGACTGAGCCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 90 bp CAGCCTCCACCTCCCAAGTGCTGGGACTACAAGAACGAGCCACCATaGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATATAGT +
Preference number: 1 (lower is better)
Translates to: QPPPPKCWDYKNEPP*TTPTTFLKDKDSYS
Trigger: ACTATATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTCTTGTAGTCCCAGCACTTGGGAGGTGGAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 90 bp TGGTTTGATGGTATTGCTGACGCTGACTGCAGGTGCACAGCCTCATaGGAACAGTGCTTACAGTTCCGTTTACTTACTTGGAACTTCTAC +
Preference number: 1 (lower is better)
Translates to: WFDGIADADCRCTAS*EQCLQFRLLTWNFY
Trigger: GTAGAAGTTCCAAGTAAGTAAACGGAACTGTAAGCACTGTTCTCATGAGGCTGTGCACCTGCAGTCAGCGTCAGCAATACCATCAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 90 bp AGAGCATTAGATAGAGCTCGGCTGAAGGATATTCTACAAAAGAACTaGCCTGGACTCTTCAAAAGTGTCACGATCACCGAAGAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: RALDRARLKDILQKN*PGLFKSVTITEEQG
Trigger: TCCCTGCTCTTCGGTGATCGTGACACTTTTGAAGAGTCCAGGCCAGTTCTTTTGTAGAATATCCTTCAGCCGAGCTCTATCTAATGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 90 bp GGGCTCAAGTGGAAACTTAAGGGTTCTTTGGAAAGTCAGTTGTGTTaGATGGTGTTTTGCAGGAGCAAACATGAGAAGGAGTGTTTTCCT +
Preference number: 1 (lower is better)
Translates to: GLKWKLKGSLESQLC*MVFCRSKHEKECFP
Trigger: AGGAAAACACTCCTTCTCATGTTTGCTCCTGCAAAACACCATCCAACACAACTGACTTTCCAAAGAACCCTTAAGTTTCCACTTGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 90 bp CTTACAGTTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTaGCACTGGGAGGATCTTTTGATCAGTCTTATCAAGTCTGAGCTC +
Preference number: 1 (lower is better)
Translates to: LTVPFTYLELLHSQR*HWEDLLISLIKSEL
Trigger: GAGCTCAGACTTGATAAGACTGATCAAAAGATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAACTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 90 bp GCACAATTGCACATCAGAATTTACTTTCCACAATTTGTTCCCATTTaGTATTCTCCTCTAGCTGCTTTCACAGTGATGTCCTGCCTTGTT +
Preference number: 1 (lower is better)
Translates to: AQLHIRIYFPQFVPI*YSPLAAFTVMSCLV
Trigger: AACAAGGCAGGACATCACTGTGAAAGCAGCTAGAGGAGAATACCAAATGGGAACAAATTGTGGAAAGTAAATTCTGATGTGCAATTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 90 bp TATCATTACTTTAAAAGTATTATTACTGTCATGTATATGTCTGTGTaGGGCAGGAAGTCATGTCACCACGTGTGTGGTCAGAGAACCATT +
Preference number: 1 (lower is better)
Translates to: YHYFKSIITVMYMSV*GRKSCHHVCGQRTI
Trigger: AATGGTTCTCTGACCACACACGTGGTGACATGACTTCCTGCCCCACACAGACATATACATGACAGTAATAATACTTTTAAAGTAATGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCCACCTGTGTGGAGCCTaGCTCCAGCCTTGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: REAAGHWSLWSPCQKRRPHLCGA*LQPCSH
Trigger: GTGGGAGCAAGGCTGGAGTCAGGCTCCACACAGGTG...GGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR GCA 90 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCGCTAAGGCAGACCCGTaGCCACCTGTGTGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: REAAGHWSLWSPCQKRRPAKADP*PPVWSL
Trigger: CAGGCTCCACACAGGTGGGCACGGGTCTGCCTTAGC...GGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CCA 90 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCGTTCACCTGGGACCATaGTCCCACCCCAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: REAAGHWSLWSPCQKRRPVHLGP*SHPRGR
Trigger: CCTTCCTCTGGGGTGGGACCATGGTCCCAGGTGAAC...GGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CCA 90 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCGCTGAGGTGTTCACCTaGGACCATGGTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: REAAGHWSLWSPCQKRRPAEVFT*DHGPTP
Trigger: TGGGGTGGGACCATGGTCCCAGGTGAACACCTCAGC...GGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATAGGATGTCCAGGCTGGTaGAAGCCACAGCCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: SPGWPAALSADQASLDFIGCPGW*KPQPAD
Trigger: ATCTGCAGGCTGTGGCTTTCACCAGCCTGGACATCC...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR GCA 90 bp GAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCCCACTACAGAGCTACCTGTaGTTGGGGCTCCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: EAAGHWSLWSPCQKRRPPLQSYL*LGLLAS
Trigger: GGAAGCCAGGAGCCCCAAGCACAGGTAGCTCTGTAG...TGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CCA 90 bp AACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGACCGTGCCCACCTGTGTaGAGCCTGACTCCAGCCTTG +
Preference number: 2 (lower is better)
Translates to: NCLGRHRGRRWKVECTVGPCPPV*SLTPAL
Trigger: CAAGGCTGGAGTCAGGCTCCACACAGGTGGGCACGG...TCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp GGCTGTGAGTTGGCCCAGGACAGTCTACAGTGGCAGAACATGGAGGTGCAAGCAGGCCTTGGAAAGGCATaGGGGCAAGGTGGATTGGTT +
Preference number: 2 (lower is better)
Translates to: GCELAQDSLQWQNMEVQAGLGKA*GQGGLV
Trigger: AACCAATCCACCTTGCCCTCATGCCTTTCCAAGGCC...TGCTTGCACCTCCATGTTCTGCCACTGTAGACTGTCCTGGGCCAACTCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAGGACTCGACGGACTGTaGTGGAGGCTGAGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEGLDGL*WRLSLA
Trigger: AGCCAAGCTCAGCCTCCATCACAGTCCGTCGAGTCC...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR GCA 90 bp GAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCCCAGAGGTGGTGCACCACTaGCTGAGTCCTATCTTCTTC +
Preference number: 2 (lower is better)
Translates to: EAAGHWSLWSPCQKRRPPEVVHH*LSPIFF
Trigger: GAAGAAGATAGGACTCAGGCAGTGGTGCACCACCTC...TGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR GCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAAGGCCTGGCTGTCTCTaGTGGGCATTGCTACCGCTG +
Preference number: 2 (lower is better)
Translates to: VQKSTEGSHQELSQGTEERPGCL*WALLPL
Trigger: CAGCGGTAGCAATGCCCAGCAGAGACAGCCAGGCCT...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp AACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGAGAGGGTGCTAGGCCTTaGAAAGGCATGAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: NCLGRHRGRRWKVECTVGEGARP*KGMRAR
Trigger: CCTTGCCCTCATGCCTTTCCAAGGCCTAGCACCCTC...TCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CCA 90 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCGCAATGCTACTTTCCTaGTCCTGTCACTCCCCATGC +
Preference number: 2 (lower is better)
Translates to: REAAGHWSLWSPCQKRRPAMLLS*SCHSPC
Trigger: GCATGGGGAGTGACAGGACCAGGAAAGTAGCATTGC...GGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CAA 90 bp ACGTGCTGTGAGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTaGCCAAAAACGCAGACCCCCAGACTCATCAGTGAGAGCATTAGA +
Preference number: 2 (lower is better)
Translates to: TCCEGGSRALVSVVT*PKTQTPRLISESIR
Trigger: TCTAATGCTCTCACTGATGAGTCTGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCTCACAGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR GCA 90 bp GAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCCCACGATGGAAAGTAGAATaGACTGTGGGATGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: EAAGHWSLWSPCQKRRPPRWKVE*TVGCPG
Trigger: GCCTGGACATCCCACAGTGCATTCTACTTTCCATCG...TGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR GCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTCCTCCACCTCCCAAGTaGTGGGACTACAAGAACGAG +
Preference number: 2 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSPPPPK*WDYKNE
Trigger: CTCGTTCTTGTAGTCCCAGCACTTGGGAGGTGGAGG...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp GCTACTTTCCTGGTCCTGTCACTCCCCATGCGTCTATGCTGTGTGACAGGAGAGGGCATGAGGGCAAGGTaGATTGGTTGCCATGCCACA +
Preference number: 2 (lower is better)
Translates to: ATFLVLSLPMRLCCVTGEGMRAR*IGCHAT
Trigger: TGTGGCATGGCAACCAATCCACCTTGCCCTCATGCC...CTCTCCTGTCACACAGCATAGACGCATGGGGAGTGACAGGACCAGGAAAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CCA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATAGCTCTAGTGAGGACATaGAGTGGAGTGCACACTGAA +
Preference number: 2 (lower is better)
Translates to: SPGWPAALSADQASLDFIALVRT*SGVHTE
Trigger: TTCAGTGTGCACTCCACTCCATGTCCTCACTAGAGC...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTCGTACAGAAGTCCACTaGGGGAAGCCATCAGGAACT +
Preference number: 2 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSRTEVH*GKPSGT
Trigger: AGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTACG...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp AAACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGCATCTTGACAGAGGCTaGCTAACACACAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: KLPWATQGKAMESRMHCGHLDRG*LTHRRA
Trigger: AGCCCTCCTGTGTGTTAGCCAGCCTCTGTCAAGATG...CCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp CCGAAGAGCAGGGAAGACACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATGTGAGCATCTTGTCATaGCAATCTATGAGTCATGGC +
Preference number: 2 (lower is better)
Translates to: PKSREDTETALGDTGEGDVSILS*QSMSHG
Trigger: GCCATGACTCATAGATTGTCATGACAAGATGCTCAC...ATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp GAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCCCATGTCACTCAGAGCTGTaGGCATCTTGTCATGACAAT +
Preference number: 2 (lower is better)
Translates to: EAAGHWSLWSPCQKRRPPCHSEL*ASCHDN
Trigger: ATTGTCATGACAAGATGCTCACAGCTCTGAGTGACA...TGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCTGTGACAGGAGAGGCTaGGTTAAAGGTATAAGAGGT +
Preference number: 2 (lower is better)
Translates to: REAAGHWSLWSPCQKRRPCDRRG*VKGIRG
Trigger: ACCTCTTATACCTTTAACTCAGCCTCTCCTGTCACA...GGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR GCA 90 bp CCGAAGAGCAGGGAAGACACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATAGGCTTCCTGTTCCTTaGCTTGGAGATCATAACAGA +
Preference number: 2 (lower is better)
Translates to: PKSREDTETALGDTGEGDRLPVP*LGDHNR
Trigger: TCTGTTATGATCTCCAAGGCAAGGAACAGGAAGCCT...ATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR GCA 90 bp GAACTCATCCCCAAGGTTTGGGTCAGCTCCAGCAGCAAGCAGGACCTGCACCACGCCAAGTTTGTGTCTTaGATTGACATCTGCACCTTC +
Preference number: 2 (lower is better)
Translates to: ELIPKVWVSSSSKQDLHHAKFVS*IDICTF
Trigger: GAAGGTGCAGATGTCAATGCAAGACACAAACTTGGC...GTGGTGCAGGTCCTGCTTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR-3UTR TCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAGACTGTGATGGAGGCTaGGCTTGGCTTGGTTACATA +
Preference number: 2 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEDCDGG*AWLGYI
Trigger: TATGTAACCAAGCCAAGCTCAGCCTCCATCACAGTC...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTTTGCAGGAGCAAACATaGGAAGGAGTGTTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSLQEQT*EGVFSW
Trigger: CCAGGAAAACACTCCTTCTCATGTTTGCTCCTGCAA...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp GTATATGTCTGTGTGGGGCAGGAAGTCATGTCACCACGTGTGTGGTCAGAGAACGGGCATTGGTCTCTGTaGTCACCTTGCCAAAAACGC +
Preference number: 2 (lower is better)
Translates to: VYVCVGQEVMSPRVWSENGHWSL*SPCQKR
Trigger: GCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCC...GTTCTCTGACCACACACGTGGTGACATGACTTCCTGCCCCACACAGACATATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CAA 90 bp ATCAAGAAGCCATTGGTTCACACAATAACAGGAAACAGGAAGGCCTaGGAGAAATGGGAGCTGTGGTGTGGAGGCTGTGAGTTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: IKKPLVHTITGNRKA*EKWELWCGGCELAQ
Trigger: CTGGGCCAACTCACAGCCTCCACACCACAGCTCCCATTTCTCCAAGGCCTTCCTGTTTCCTGTTATTGTGTGAACCAATGGCTTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR TCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTCAAAAGCAGCTTGGGTaGGTAGAGAGTTTATGGCTT +
Preference number: 2 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSQKQLG*VESLWL
Trigger: AAGCCATAAACTCTCTACTCACCCAAGCTGCTTTTG...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp CTGGCCTGGACTCTTCAAAAGTGTCACGATCACCGAAGAGCAGGGAAGACACAGGACAGTTGTAGGGCATaGGAAAGAGGTAGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: LAWTLQKCHDHRRAGKTQDSCRA*ERGSCR
Trigger: TCTACAGCTACCTCTTTCCCATGCCCTACAACTGTC...CTGTGTCTTCCCTGCTCTTCGGTGATCGTGACACTTTTGAAGAGTCCAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTGAAAGTCAGTTGTGTTaGATGGTGTTTTGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSESQLC*MVFCRS
Trigger: GCTCCTGCAAAACACCATCCAACACAACTGACTTTC...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp GTGGCTGATGGATGCCACCATCAGTGCTGTCCAGCCAAGTTTGTGTCTTGCATTCTGATAACAGCCTTCTaGCTTCCTGCACGTTATTGG +
Preference number: 2 (lower is better)
Translates to: VADGCHHQCCPAKFVSCILITAF*LPARYW
Trigger: CCAATAACGTGCAGGAAGTCAGAAGGCTGTTATCAG...AATGCAAGACACAAACTTGGCTGGACAGCACTGATGGTGGCATCCATCAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR-3UTR GCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTAACGCAGATGGCAGTTaGTCCAAAGAACCATTTCTA +
Preference number: 2 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSNADGS*SKEPFL
Trigger: TAGAAATGGTTCTTTGGAGCAACTGCCATCTGCGTT...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATAATTCTACAAAAGAACTaGCCTGGACTCTTCAAAAGT +
Preference number: 2 (lower is better)
Translates to: SPGWPAALSADQASLDFIILQKN*PGLFKS
Trigger: ACTTTTGAAGAGTCCAGGCCAGTTCTTTTGTAGAAT...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR GCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAATGTTGGATGGTGTTTTaGAGGAGCAAACATGAGAAG +
Preference number: 2 (lower is better)
Translates to: VQKSTEGSHQELSQGTEECWMVF*RSKHEK
Trigger: CTTCTCATGTTTGCTCCTGCAAAACACCATCCAACA...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR GCA 90 bp AAGGAATTAACTCAAGTCATCAGGCTGGGTAAAAAGTGCCATAACCTGCTGGGCAGTCAGACCTATGGGTaGTCTACACTGGCTCAGTCA +
Preference number: 2 (lower is better)
Translates to: KELTQVIRLGKKCHNLLGSQTYG*STLAQS
Trigger: TGACTGAGCCAGTGTAGAGCACCCATAGGTCTGACT...GCCCAGCAGGTTATGGCACTTTTTACCCAGCCTGATGACTTGAGTTAATTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTCCTGGCTGTCTCTGCTaGGCATTGCTACCGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGPGCLC*ALLPLL
Trigger: CAGCAGCGGTAGCAATGCCCAGCAGAGACAGCCAGG...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CAA 90 bp CACTGCCCATACAAGGCTGGGCTCAAGTGGAAACTTAAGGGTTCTTaGGAAAGTCAGTTGTGTTGGATGGTGTTTTGCAGGAGCAAACAT +
Preference number: 2 (lower is better)
Translates to: HCPYKAGLKWKLKGS*ESQLCWMVFCRSKH
Trigger: ATGTTTGCTCCTGCAAAACACCATCCAACACAACTGACTTTCCAAAGAACCCTTAAGTTTCCACTTGAGCCCAGCCTTGTATGGGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CAA 90 bp TTCTCCTCTAGCTGCTTTCACAGTGATGTCCTGCCTTGTTCAGCCTaGAGAGGCAGCCAGCACTTACAAGTCAAACACTTTAGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: FSSSCFHSDVLPCSA*RGSQHLQVKHFSFL
Trigger: CAAGAAACTAAAGTGTTTGACTTGTAAGTGCTGGCTGCCTCTCAAGGCTGAACAAGGCAGGACATCACTGTGAAAGCAGCTAGAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGCCAGGTCCCTCCTGCTaGCTTGTGCTGAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGPGPSC*LVLRLR
Trigger: CCTCAGCCTCAGCACAAGTCAGCAGGAGGGACCTGG...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCCTTACATGGCATAGTTaGGCTGCATCTGTCGGGACT +
Preference number: 2 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRILTWHS*AASVGT
Trigger: AGTCCCGACAGATGCAGCTCAACTATGCCATGTAAG...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGGCTGAGGCTGAGGCCTaGCTGTCTCTGCTGGGCATT +
Preference number: 2 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGAEAEA*LSLLGI
Trigger: AATGCCCAGCAGAGACAGCCAGGCCTCAGCCTCAGC...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTCCACCTCCCAAGTGCTaGGACTACAAGAACGAGCCA +
Preference number: 2 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGPPPKC*DYKNEP
Trigger: TGGCTCGTTCTTGTAGTCCCAGCACTTGGGAGGTGG...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGGCAGAGAACTTCTCCTaGCGTTCCTCCAGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGAENFS*RSSRSL
Trigger: GAGGGACCTGGAGGAACGCCAGGAGAAGTTCTCTGC...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATATCATCCTCTAGTATTTaGGAGGGCAGTGATGCCTAC +
Preference number: 2 (lower is better)
Translates to: ERATMDHTNYLFKRQRLISSSSI*EGSDAY
Trigger: GTAGGCATCACTGCCCTCCCAAATACTAGAGGATGA...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAGCTGAAGCAGACAGATaGAAGGATGTTCTGCTAAAG +
Preference number: 2 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIAEADR*KDVLLK
Trigger: CTTTAGCAGAACATCCTTTCATCTGTCTGCTTCAGC...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAAGGACATGTGATGTTTaGAGGGAGCACAAAAAGGAC +
Preference number: 2 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIRTCDV*REHKKD
Trigger: GTCCTTTTTGTGCTCCCTCCAAACATCACATGTCCT...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAAAGGCTGGGCTCAAGTaGAAACTTAAGGGTTCTTTG +
Preference number: 2 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIKAGLK*KLKGSL
Trigger: CAAAGAACCCTTAAGTTTCCACTTGAGCCCAGCCTT...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGTGTGAACTGAACTGCTaGTTTCCTGACAACGCAGAT +
Preference number: 2 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGCELNC*FPDNAD
Trigger: ATCTGCGTTGTCAGGAAATCAGCAGTTCAGTTCACA...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGGTCAGTTGTGTTGGATaGTGTTTTGCAGGAGCAAAC +
Preference number: 2 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGVSCVG*CFAGAN
Trigger: GTTTGCTCCTGCAAAACACCATCCAACACAACTGAC...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGACGACACACATGTATTaGTCAGCCTTACATGGCATA +
Preference number: 2 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGTTHMY*SALHGI
Trigger: TATGCCATGTAAGGCTGATCAATACATGTGTGTCGT...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGGCTAAGGCAGACTTGTaGAGAAACATTTTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGAKADL*RNILLK
Trigger: CTTCAGCAAAATGTTTCTTCACAAGTCTGCCTTAGC...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR TCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTACCATTAAGCCAGATTaGTCTTTTTGGATTGGTCTA +
Preference number: 2 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGTIKPD*SFWIGL
Trigger: TAGACCAATCCAAAAAGATCAATCTGGCTTAATGGT...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR GCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGGAGTTTATGGCTTATTaGGTACAGAAGTCCACTGAG +
Preference number: 2 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGEFMAY*VQKSTE
Trigger: CTCAGTGGACTTCTGTACGCAATAAGCCATAAACTC...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR GCA 72 bp GGACGGCAGTTAAGAGACAGGGCTAAGGCAGACCCGTaGCCACCTGTGTGGAGCCTGACTCCAGCCTTGCTC +
Preference number: 3 (lower is better)
Translates to: GRQLRDRAKADP*PPVWSLTPALL
Trigger: GAGCAAGGCTGGAGTCAGGCTCCACACAGGTGGGCACGGGTCTGCCTTAGCCCTGTCTCTTAACTGCCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp AGGTCCCTCCTGCTGACTTGTGCTGAGGCTGAGGCCTaGCTGTCTCTGCTGGGCATTGCTACCGCTGCTGAC +
Preference number: 3 (lower is better)
Translates to: RSLLLTCAEAEA*LSLLGIATAAD
Trigger: GTCAGCAGCGGTAGCAATGCCCAGCAGAGACAGCCAGGCCTCAGCCTCAGCACAAGTCAGCAGGAGGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 72 bp CTGAATGAGCCCCATCTCAGAGCTGAGGTGTTCACCTaGGACCATGGTCCCACCCCAGAGGAAGGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: LNEPHLRAEVFT*DHGPTPEEGRK
Trigger: CTTCCTGCCTTCCTCTGGGGTGGGACCATGGTCCCAGGTGAACACCTCAGCTCTGAGATGGGGCTCATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp GGGATGTCCAGGCTGGTGAAAGCCACAGCCTGCAGATaGGGCAGGAGTGTGTGGCAATGCTACTTTCCTGGT +
Preference number: 3 (lower is better)
Translates to: GMSRLVKATACR*GRSVWQCYFPG
Trigger: ACCAGGAAAGTAGCATTGCCACACACTCCTGCCCCATCTGCAGGCTGTGGCTTTCACCAGCCTGGACATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp TCCACTTCGCTGAGAGGCACAGCAGAGAACTTCTCCTaGCGTTCCTCCAGGTCCCTCCTGCTGACTTGTGCT +
Preference number: 3 (lower is better)
Translates to: STSLRGTAENFS*RSSRSLLLTCA
Trigger: AGCACAAGTCAGCAGGAGGGACCTGGAGGAACGCCAGGAGAAGTTCTCTGCTGTGCCTCTCAGCGAAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 72 bp TGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATaGTTCTTCAGCCTCCACCTCCCAAGTGCTGGGACT +
Preference number: 3 (lower is better)
Translates to: CRSAGLTVTTQG*FFSLHLPSAGT
Trigger: AGTCCCAGCACTTGGGAGGTGGAGGCTGAAGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR GCA 72 bp CACTGTGGGATGTCCAGGCTGGTGAAAGCCACAGCCTaGAGATGGGGCAGGAGTGTGTGGCAATGCTACTTT +
Preference number: 3 (lower is better)
Translates to: HCGMSRLVKATA*RWGRSVWQCYF
Trigger: AAAGTAGCATTGCCACACACTCCTGCCCCATCTGCAGGCTGTGGCTTTCACCAGCCTGGACATCCCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR GCA 72 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTaGCAAAAACGCAGACCCCCAGACTCATCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: REAAGHWSLWSP*QKRRPPDSSVR
Trigger: TCTCACTGATGAGTCTGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR GCA 72 bp CTCACTCTGCAGTCCTGGCTGGCCCGCAGCTCTCTCTaGAGACCAGGCCAGTCTCGACTTTATAGAGATGTA +
Preference number: 3 (lower is better)
Translates to: LTLQSWLARSSL*RPGQSRLYRDV
Trigger: TACATCTCTATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACTGCAGAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp GAGGGTGCTAGGCCTTGGAAAGGCATGAGGGCAAGGTaGATTGGTTGCCATGCCACAGCAAGGGGCCTTTAT +
Preference number: 3 (lower is better)
Translates to: EGARPWKGMRAR*IGCHATARGLY
Trigger: ATAAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTCATGCCTTTCCAAGGCCTAGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp CCAGAGGAAGGCAGGAAGAGGGACCAGTCAGACCTATaGGTGCTCTACACTGGCTCAGTCACAAGCCTTGAC +
Preference number: 3 (lower is better)
Translates to: PEEGRKRDQSDL*VLYTGSVTSLD
Trigger: GTCAAGGCTTGTGACTGAGCCAGTGTAGAGCACCCATAGGTCTGACTGGTCCCTCTTCCTGCCTTCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp GTGAAAGCCACAGCCTGCAGATGGGGCAGGAGTGTGTaGCAATGCTACTTTCCTGGTCCTGTCACTCCCCAT +
Preference number: 3 (lower is better)
Translates to: VKATACRWGRSV*QCYFPGPVTPH
Trigger: ATGGGGAGTGACAGGACCAGGAAAGTAGCATTGCCACACACTCCTGCCCCATCTGCAGGCTGTGGCTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp CACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATaGAAAGTAGAATGCACTGTGGGATGTCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: HRNCLGRHRGRR*KVECTVGCPGW
Trigger: CCAGCCTGGACATCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CAA 90 bp CTGGCCTGGACTCTTCAAAAGTGTCACGATCACCGAAGAGCAGGGAAGACACAGATGATGCAGAGTGACTaGCCAGGCCCTGCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: LAWTLQKCHDHRRAGKTQMMQSD*PGPAVS
Trigger: GGACACAGCAGGGCCTGGCAAGTCACTCTGCATCAT...CTGTGTCTTCCCTGCTCTTCGGTGATCGTGACACTTTTGAAGAGTCCAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CAA 90 bp AGCAGCAAGCAGGACCTGCACCACACTCTCATTGTGGCTGATGGATGCCACCATACTTCCTGCACGTTATaGGCCCGGGCAGCTTCCATT +
Preference number: 3 (lower is better)
Translates to: SSKQDLHHTLIVADGCHHTSCTL*ARAASI
Trigger: AATGGAAGCTGCCCGGGCCAATAACGTGCAGGAAGT...ATGGTGGCATCCATCAGCCACAATGAGAGTGTGGTGCAGGTCCTGCTTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR-3UTR CAA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTCTGAGACAGATGCACTaGCTAAGGCAAGACCGCTGG +
Preference number: 3 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSLRQMH*LRQDRW
Trigger: CCAGCGGTCTTGCCTTAGCAAGTGCATCTGTCTCAG...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 72 bp CCTGTAGTGGTGATGGCTTCTGCAGATGATGCAGAGTaGCTTGCCAGGCCCTGCTGTGTCCTGCTGTCCTTT +
Preference number: 3 (lower is better)
Translates to: PVVVMASADDAE*LARPCCVLLSF
Trigger: AAAGGACAGCAGGACACAGCAGGGCCTGGCAAGTCACTCTGCATCATCTGCAGAAGCCATCACCACTACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 72 bp CAGCAAGCAGGACCTGCACCACACTCTCATTGTGGCTaGTGGATGCCACCATCAGTGCTGTCCAGCCAAGTT +
Preference number: 3 (lower is better)
Translates to: QQAGPAPHSHCG*WMPPSVLSSQV
Trigger: AACTTGGCTGGACAGCACTGATGGTGGCATCCATCAGCCACAATGAGAGTGTGGTGCAGGTCCTGCTTGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR GCA 72 bp AGGAAGGCAGGAAGAGGGACCAGTCAGACCTATGGGTaGTCTACACTGGCTCAGTCACAAGCCTTGACTCTG +
Preference number: 3 (lower is better)
Translates to: RKAGRGTSQTYG*STLAQSQALTL
Trigger: CAGAGTCAAGGCTTGTGACTGAGCCAGTGTAGAGCACCCATAGGTCTGACTGGTCCCTCTTCCTGCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR GCA 72 bp CTGCTGTCCTTTATGGGTATGCTAGGCCCATGGAATTaGTACCTGGCTGGGACGGCAGTTAAGAGACAGGGC +
Preference number: 3 (lower is better)
Translates to: LLSFMGMLGPWN*YLAGTAVKRQG
Trigger: GCCCTGTCTCTTAACTGCCGTCCCAGCCAGGTAGCAATTCCATGGGCCTAGCATACCCATAAAGGACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR GCA 72 bp TTTCCAGACAATTCGAGCTTTGGGGTTACTGCCACGTaGTGTGAGGGAGGCAGCAGGGCATTGGTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: FPDNSSFGVTAT*CEGGSRALVSV
Trigger: CACAGAGACCAATGCCCTGCTGCCTCCCTCACAGCACGTGGCAGTAACCCCAAAGCTCGAATTGTCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp TGTGGAGGCTGTGAGTTGGCCCAGGACAGTCTACAGTaGCAGAACATGGAGGTGCAAGCAACGCCAAAGCAT +
Preference number: 3 (lower is better)
Translates to: CGGCELAQDSLQ*QNMEVQATPKH
Trigger: ATGCTTTGGCGTTGCTTGCACCTCCATGTTCTGCCACTGTAGACTGTCCTGGGCCAACTCACAGCCTCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 72 bp CAATGCTCTAGTGAGGACATGGAGTGGAGTGCACACTaGAGTGCAGACCAGGCTTCCTGTTCCTTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: QCSSEDMEWSAH*SADQASCSLPW
Trigger: CCAAGGCAAGGAACAGGAAGCCTGGTCTGCACTTCAGTGTGCACTCCACTCCATGTCCTCACTAGAGCATTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 72 bp TCTACTCAGTCCTGTAGTGGTGATGGCTTCTGCAGATaGTGCAGAGTGACTTGCCAGGCCCTGCTGTGTCCT +
Preference number: 3 (lower is better)
Translates to: STQSCSGDGFCR*CRVTCQALLCP
Trigger: AGGACACAGCAGGGCCTGGCAAGTCACTCTGCATCATCTGCAGAAGCCATCACCACTACAGGACTGAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR GCA 72 bp CAGGACCTGCACCACACTCTCATTGTGGCTGATGGATaGCACCATCAGTGCTGTCCAGCCAAGTTTGTGTCT +
Preference number: 3 (lower is better)
Translates to: QDLHHTLIVADG*HHQCCPAKFVS
Trigger: AGACACAAACTTGGCTGGACAGCACTGATGGTGGCATCCATCAGCCACAATGAGAGTGTGGTGCAGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR CCA 72 bp TCACAACCAAGAAAGGCAGGAGAGGGTGCTAGGCCTTaGAAAGGCATGAGGGCAAGGTGGATTGGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: SQPRKAGEGARP*KGMRARWIGCH
Trigger: ATGGCAACCAATCCACCTTGCCCTCATGCCTTTCCAAGGCCTAGCACCCTCTCCTGCCTTTCTTGGTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp GATCACCGAAGAGCAGGGAAGACACAGAAACTGCCTTaGGCGACACAGGGGAAGGCGATGGAAAGTAGAATG +
Preference number: 3 (lower is better)
Translates to: DHRRAGKTQKLP*ATQGKAMESRM
Trigger: CATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp CGGGACTCCATAGACAAAAACGCACCAAAAACCTGGTaGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGAT +
Preference number: 3 (lower is better)
Translates to: RDSIDKNAPKTW*CVLLLLRTRAD
Trigger: ATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTTTGGTGCGTTTTTGTCTATGGAGTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 72 bp TGTGTCCTGCTGTCCTTTATGGGTATGCTAGGCCCATaGAATTGCTACCTGGCTGGGACGGCAGTTAAGAGA +
Preference number: 3 (lower is better)
Translates to: CVLLSFMGMLGP*NCYLAGTAVKR
Trigger: TCTCTTAACTGCCGTCCCAGCCAGGTAGCAATTCCATGGGCCTAGCATACCCATAAAGGACAGCAGGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp CGGCTGAGACAGATGCACTTGCTAAGGCAAGACCGCTaGAGGACATGTGATGTTTGGAGGGAGCACAAAAAG +
Preference number: 3 (lower is better)
Translates to: RLRQMHLLRQDR*RTCDVWREHKK
Trigger: CTTTTTGTGCTCCCTCCAAACATCACATGTCCTCCAGCGGTCTTGCCTTAGCAAGTGCATCTGTCTCAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CAA 90 bp AAGGAATTAACTCAAGTCATCAGGCTGGGTAAAAAGTGCCATAACCTGCTGGGCAGCCTGACTCCAGCCTaGCTCCCACAGCACCTTCTG +
Preference number: 3 (lower is better)
Translates to: KELTQVIRLGKKCHNLLGSLTPA*LPQHLL
Trigger: CAGAAGGTGCTGTGGGAGCAAGGCTGGAGTCAGGCT...GCCCAGCAGGTTATGGCACTTTTTACCCAGCCTGATGACTTGAGTTAATTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CAA 90 bp AAGGAATTAACTCAAGTCATCAGGCTGGGTAAAAAGTGCCATAACCTGCTGGGCGTCTCTGTGGTCACCTaGCCAAAAACGCAGACCCCC +
Preference number: 3 (lower is better)
Translates to: KELTQVIRLGKKCHNLLGVSVVT*PKTQTP
Trigger: GGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGAC...GCCCAGCAGGTTATGGCACTTTTTACCCAGCCTGATGACTTGAGTTAATTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 72 bp CTTAGTCTCTTCCATCTTCACAGATCTCCACTTCGCTaGGAGGCACAGCAGAGAACTTCTCCTGGCGTTCCT +
Preference number: 3 (lower is better)
Translates to: LSLFHLHRSPLR*EAQQRTSPGVP
Trigger: AGGAACGCCAGGAGAAGTTCTCTGCTGTGCCTCTCAGCGAAGTGGAGATCTGTGAAGATGGAAGAGACTAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 72 bp CTGACTTCAGCCCTGTCTAAACATCTTGACAGAGGCTaGCTAACACACAGGAGGGCTCTACTCAGTCCTGTA +
Preference number: 3 (lower is better)
Translates to: LTSALSKHLDRG*LTHRRALLSPV
Trigger: TACAGGACTGAGTAGAGCCCTCCTGTGTGTTAGCCAGCCTCTGTCAAGATGTTTAGACAGGGCTGAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CAA 90 bp AAACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGTTCCTGTTCCTTGCCTaGGAGATCATAACAGACTAT +
Preference number: 3 (lower is better)
Translates to: KLPWATQGKAMESRMHCGFLFLA*EIITDY
Trigger: ATAGTCTGTTATGATCTCCAAGGCAAGGAACAGGAA...CCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 72 bp GGTATTGCTGACGCTGACTGCAGGTGCACAGCCTCATaGGAACAGTGCTTACAGTTCCGTTTACTTACTTGG +
Preference number: 3 (lower is better)
Translates to: GIADADCRCTAS*EQCLQFRLLTW
Trigger: CCAAGTAAGTAAACGGAACTGTAAGCACTGTTCTCATGAGGCTGTGCACCTGCAGTCAGCGTCAGCAATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR GCA 72 bp CACACTCTCATTGTGGCTGATGGATGCCACCATCAGTaGTGTCCAGCCAAGTTTGTGTCTTGCATTGACATC +
Preference number: 3 (lower is better)
Translates to: HTLIVADGCHHQ*CPAKFVSCIDI
Trigger: GATGTCAATGCAAGACACAAACTTGGCTGGACAGCACTGATGGTGGCATCCATCAGCCACAATGAGAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR TCA 72 bp CTTCCTGTTCCTTGCCTTGGAGATCATAACAGACTATaGACCTCACAACCAAGAAAGGCAGGAGAGGGTGCT +
Preference number: 3 (lower is better)
Translates to: LPVPCLGDHNRL*TSQPRKAGEGA
Trigger: AGCACCCTCTCCTGCCTTTCTTGGTTGTGAGGTTCATAGTCTGTTATGATCTCCAAGGCAAGGAACAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR TCA 72 bp GCTGCTTTCACAGTGATGTCCTGCCTTGTTCAGCCTTaGGAGGCAGCCAGCACTTACAAGTCAAACACTTTA +
Preference number: 3 (lower is better)
Translates to: AAFTVMSCLVQP*EAASTYKSNTL
Trigger: TAAAGTGTTTGACTTGTAAGTGCTGGCTGCCTCTCAAGGCTGAACAAGGCAGGACATCACTGTGAAAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR GCA 72 bp CTCAAACTTGTGACAATCCTACCTCAACCTCCCAATTaGTGGGAGTCCAGGCACAAACCAGTAAGTAGTCTG +
Preference number: 3 (lower is better)
Translates to: LKLVTILPQPPN*WESRHKPVSSL
Trigger: CAGACTACTTACTGGTTTGTGCCTGGACTCCCAGCAATTGGGAGGTTGAGGTAGGATTGTCACAAGTTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp AAACTTGTGACAATCCTACCTCAACCTCCCAATTGCTaGGAGTCCAGGCACAAACCAGTAAGTAGTCTGGCT +
Preference number: 3 (lower is better)
Translates to: KLVTILPQPPNC*ESRHKPVSSLA
Trigger: AGCCAGACTACTTACTGGTTTGTGCCTGGACTCCCAGCAATTGGGAGGTTGAGGTAGGATTGTCACAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR-3UTR CAA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTGCCAGATTGATCTTTTaGGATTGGTCTAAAGCATTT +
Preference number: 3 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSARLIF*DWSKAF
Trigger: AAATGCTTTAGACCAATCCAAAAAGATCAATCTGGC...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 72 bp GAGCACAAAAAGGACTCGACGGACTGTGATGGAGGCTaGGCTTGGCTTGGTTACATAGCTAAACACTTCTTA +
Preference number: 3 (lower is better)
Translates to: EHKKDSTDCDGG*AWLGYIAKHFL
Trigger: TAAGAAGTGTTTAGCTATGTAACCAAGCCAAGCTCAGCCTCCATCACAGTCCGTCGAGTCCTTTTTGTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CAA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCGGAAAGTCAGTTGTGTaGGATGGTGTTTTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIGKSVV*DGVLQE
Trigger: CTCCTGCAAAACACCATCCAACACAACTGACTTTCC...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 72 bp GAACTTAGTATGCAGCACAAAGTAGCCTCAAACTTGTaGCAATCCTACCTCAACCTCCCAATTGCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: ELSMQHKVASNL*QSYLNLPIAGS
Trigger: ACTCCCAGCAATTGGGAGGTTGAGGTAGGATTGTCACAAGTTTGAGGCTACTTTGTGCTGCATACTAAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp GATAGAGCTCGGCTGAAGGATATTCTACAAAAGAACTaGCCTGGACTCTTCAAAAGTGTCACGATCACCGAA +
Preference number: 3 (lower is better)
Translates to: DRARLKDILQKN*PGLFKSVTITE
Trigger: TTCGGTGATCGTGACACTTTTGAAGAGTCCAGGCCAGTTCTTTTGTAGAATATCCTTCAGCCGAGCTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CCA 72 bp ACAAGGCTGGGCTCAAGTGGAAACTTAAGGGTTCTTTaGAAAGTCAGTTGTGTTGGATGGTGTTTTGCAGGA +
Preference number: 3 (lower is better)
Translates to: TRLGSSGNLRVL*KVSCVGWCFAG
Trigger: TCCTGCAAAACACCATCCAACACAACTGACTTTCCAAAGAACCCTTAAGTTTCCACTTGAGCCCAGCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 72 bp TTCTACATAGTCAGAGGTGACACTGGGAGGATCTTTTaGTCAGTCTTATCAAGTCTGAGCTCATTCCTTCCT +
Preference number: 3 (lower is better)
Translates to: FYIVRGDTGRIF*SVLSSLSSFLP
Trigger: AGGAAGGAATGAGCTCAGACTTGATAAGACTGATCAAAAGATCCTCCCAGTGTCACCTCTGACTATGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 72 bp TGGAAACTTAAGGGTTCTTTGGAAAGTCAGTTGTGTTaGATGGTGTTTTGCAGGAGCAAACATGAGAAGGAG +
Preference number: 3 (lower is better)
Translates to: WKLKGSLESQLC*MVFCRSKHEKE
Trigger: CTCCTTCTCATGTTTGCTCCTGCAAAACACCATCCAACACAACTGACTTTCCAAAGAACCCTTAAGTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 72 bp GTAATGAAGGATTCTTCACTAACGACACACATGTATTaGTCAGCCTTACATGGCATAGTTGAGCTGCATCTG +
Preference number: 3 (lower is better)
Translates to: VMKDSSLTTHMY*SALHGIVELHL
Trigger: CAGATGCAGCTCAACTATGCCATGTAAGGCTGATCAATACATGTGTGTCGTTAGTGAAGAATCCTTCATTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 72 bp CCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTaGCACTGGGAGGATCTTTTGATCAGTCTTATCAAG +
Preference number: 3 (lower is better)
Translates to: PFTYLELLHSQR*HWEDLLISLIK
Trigger: CTTGATAAGACTGATCAAAAGATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR-3UTR CAA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTTCTTTGGAAAGTCAGTaGTGTTGGATGGTGTTTTGC +
Preference number: 3 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGSLESQ*CWMVFC
Trigger: GCAAAACACCATCCAACACAACTGACTTTCCAAAGA...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR GCA 72 bp TTCTGTACACTTTCCTGCAGATTTCCAAACAGTAATTaGAGCTTCTCCTCCTGTGTACATCACAAACTAAGA +
Preference number: 3 (lower is better)
Translates to: FCTLSCRFPNSN*SFSSCVHHKLR
Trigger: TCTTAGTTTGTGATGTACACAGGAGGAGAAGCTGCAATTACTGTTTGGAAATCTGCAGGAAAGTGTACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR TCA 72 bp CAAGTGGTTTGTATAGAATGGACCATTAAGCCAGATTaGTCTTTTTGGATTGGTCTAAAGCATTTAGAACTC +
Preference number: 3 (lower is better)
Translates to: QVVCIEWTIKPD*SFWIGLKHLEL
Trigger: GAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAATCTGGCTTAATGGTCCATTCTATACAAACCACTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CCA 72 bp GCAGCCAGCACTTACAAGTCAAACACTTTAGTTTCTTaGTGGTCGATCATATACATACAAATATGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: AASTYKSNTLVS*WSIIYIQICFL
Trigger: AAGAAAACATATTTGTATGTATATGATCGACCACCAAGAAACTAAAGTGTTTGACTTGTAAGTGCTGGCTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCGGACGCTTCTCAGCCTaGGGTGAGGGCAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: REAAGHWSLWSPCQKRRPGRFSA*GEGSSG
Trigger: CCCTGAGCTGCCCTCACCCCAGGCTGAGAAGCGTCC...GGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp TGGCTAACACACAGGAGGGCTCTACTCAGTCCTGTAGTGGTGATGGCTTCTGCAGCGGCGCCGCTCCTCTaGCTCCCGCTTCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: WLTHRRALLSPVVVMASAAAPLL*LPLPLL
Trigger: AAGCAGAGGAAGCGGGAGGCAGAGGAGCGGCGCCGC...TGCAGAAGCCATCACCACTACAGGACTGAGTAGAGCCCTCCTGTGTGTTAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGCGGCGCCGCTCCTCTaGCTCCCGCTTCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWAAPLL*LPLPLL
Trigger: AAGCAGAGGAAGCGGGAGGCAGAGGAGCGGCGCCGC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp CCCCATCTCAGAGCTGAGGTGTTCACCTGGGACCATGGTCCCACCCCAGAGGAATCCTCTGAAGGGGGTTaGCTCCTCTGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PHLRAEVFTWDHGPTPEESSEGG*LLCPAA
Trigger: AGCTGCTGGACAGAGGAGCCAACCCCCTTCAGAGGA...TTCCTCTGGGGTGGGACCATGGTCCCAGGTGAACACCTCAGCTCTGAGATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATCAGTCGCTGCTCCAGTaGGAAGCGGCGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDQSLLQ*EAAPLL
Trigger: GAGGAGCGGCGCCGCTTCCCACTGGAGCAGCGACTG...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTGGACGCTTCTCAGCCTaGGGTGAGGGCAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSGRFSA*GEGSSG
Trigger: CCCTGAGCTGCCCTCACCCCAGGCTGAGAAGCGTCC...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CAA 72 bp GACCCGTGCCCACCTGTGTGGAGCCTGACTCCAGCCTaGCTCCCACAGCACCTTCTGTTATCTAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: DPCPPVWSLTPA*LPQHLLLSRLP
Trigger: TGGCAGTCTAGATAACAGAAGGTGCTGTGGGAGCAAGGCTGGAGTCAGGCTCCACACAGGTGGGCACGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATACTCAGGGTGGAGTGGTaGCTGGATGTCCAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: SPGWPAALSADQASLDFILRVEW*LDVQFA
Trigger: CGCAAACTGGACATCCAGGCACCACTCCACCCTGAG...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGGACGCTTCTCAGCCTaGGGTGAGGGCAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWGRFSA*GEGSSG
Trigger: CCCTGAGCTGCCCTCACCCCAGGCTGAGAAGCGTCC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATACACTCTCCTGGCCAATaGTGTGCTCCTTCAGTCGCT +
Preference number: 4 (lower is better)
Translates to: SPGWPAALSADQASLDFIHSPGQ*CAPSVA
Trigger: AGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTG...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGTGCTCCTTCAGTCGCTaGTCCAGTGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWCSFSR*SSGKRR
Trigger: GCGCCGCTTCCCACTGGAGCAGCGACTGAAGGAGCA...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGGAACCACCAGCGCCATaGCCAAGGCCCACATGCCCA +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMEPPAP*PRPTCP
Trigger: TGGGCATGTGGGCCTTGGCCATGGCGCTGGTGGTTC...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATAGCGATGGCACTCTCCTaGCCAATGATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPGWPAALSADQASLDFIAMALS*PMMCSF
Trigger: GAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGC...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
3UTR CAA 72 bp GAGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTaGCCAAAAACGCAGACCCCCAGACTCATCAGTGAG +
Preference number: 4 (lower is better)
Translates to: EGGSRALVSVVT*PKTQTPRLISE
Trigger: CTCACTGATGAGTCTGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp GAGGGCAAGGTGGATTGGTTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTTGCTCCTTCAGTCGCTaGTCCAGTGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: EGKVDWLPCHSKGPLLDVCSFSR*SSGKRR
Trigger: GCGCCGCTTCCCACTGGAGCAGCGACTGAAGGAGCA...AACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTCTCAGGGTGGAGTGGTaGCTGGATGTCCAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSLRVEW*LDVQFA
Trigger: CGCAAACTGGACATCCAGGCACCACTCCACCCTGAG...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GAGGGCAAGGTGGATTGGTTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTGAACCACCAGCGCCATaGCCAAGGCCCACATGCCCA +
Preference number: 4 (lower is better)
Translates to: EGKVDWLPCHSKGPLLDVEPPAP*PRPTCP
Trigger: TGGGCATGTGGGCCTTGGCCATGGCGCTGGTGGTTC...AACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR TCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTTGTCCAGCAGCTCCTTaGCGATGCTGTAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSCPAAP*RCCSHR
Trigger: CCGATGACTACAGCATCGTCAAGGAGCTGCTGGACA...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR TCA 90 bp AACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGAGGTCCCACAGTAGTGTaGTGTTGTGCCTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: NCLGRHRGRRWKVECTVGGPTVV*CCASAW
Trigger: CCAAGCAGAGGCACAACATCACACTACTGTGGGACC...TCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR TCA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTGGTCCCACAGTAGTGTaGTGTTGTGCCTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSGPTVV*CCASAW
Trigger: CCAAGCAGAGGCACAACATCACACTACTGTGGGACC...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTAGGAAGACTAGAGGGTaGTCCTCATCGTACCAGCCG +
Preference number: 4 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSRKTRG*SSSYQP
Trigger: CGGCTGGTACGATGAGGAGCACCCTCTAGTCTTCCT...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATACCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: SPGWPAALSADQASLDFIPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp AAACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGCAATGGTCTTCCCTTTaGCATCTGTCAGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: KLPWATQGKAMESRMHCGQWSSL*HLSGGP
Trigger: AGGGCCGCCTGACAGATGGCAAAGGGAAGACCATTG...CCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTCAATGGTCTTCCCTTTaGCATCTGTCAGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSQWSSL*HLSGGP
Trigger: AGGGCCGCCTGACAGATGGCAAAGGGAAGACCATTG...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp AACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGAGTCCTGCTCATAGGCTaGCGCCAGTTGGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: NCLGRHRGRRWKVECTVGVLLIG*RQLVYH
Trigger: GTGGTAAACCAACTGGCGGCAGCCTATGAGCAGGAC...TCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATCTCAGGGTGGAGTGGTaGCTGGATGTCCAGTTTGCG +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDLRVEW*LDVQFA
Trigger: CGCAAACTGGACATCCAGGCACCACTCCACCCTGAG...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp AACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGACTCATCCCCAAGGTTTaGGTCAGCTCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NCLGRHRGRRWKVECTVGLIPKV*VSSSSK
Trigger: CTTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAG...TCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTCTCATCCCCAAGGTTTaGGTCAGCTCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSLIPKV*VSSSSK
Trigger: CTTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAG...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATTCCTCTGAAGGGGGTTaGCTCCTCTGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDSSEGG*LLCPAA
Trigger: AGCTGCTGGACAGAGGAGCCAACCCCCTTCAGAGGA...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp AAGGAATTAACTCAAGTCATCAGGCTGGGTAAAAAGTGCCATAACCTGCTGGGCCAGTCGCTGCTCCAGTaGGAAGCGGCGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KELTQVIRLGKKCHNLLGQSLLQ*EAAPLL
Trigger: GAGGAGCGGCGCCGCTTCCCACTGGAGCAGCGACTG...GCCCAGCAGGTTATGGCACTTTTTACCCAGCCTGATGACTTGAGTTAATTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GGTGCACCACTGCCTGAGTCCTATCTTCTTCAGCCAGACTTGTTCTCCGCTGCAAGTTTCTTGGTCAGCTaGCCACCCTCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GAPLPESYLLQPDLFSAASFLVS*PPSSWP
Trigger: CGGCCATGAAGAGGGTGGCCAGCTGACCAAGAAACT...TGCAGCGGAGAACAAGTCTGGCTGAAGAAGATAGGACTCAGGCAGTGGTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTAGTTTCTTGGTCAGCTaGCCACCCTCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSSFLVS*PPSSWP
Trigger: CGGCCATGAAGAGGGTGGCCAGCTGACCAAGAAACT...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp TGGCTAACACACAGGAGGGCTCTACTCAGTCCTGTAGTGGTGATGGCTTCTGCACACACCTTCTCAGGGTaGAGTGGTGCCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: WLTHRRALLSPVVVMASAHTFSG*SGAWMS
Trigger: GGACATCCAGGCACCACTCCACCCTGAGAAGGTGTG...TGCAGAAGCCATCACCACTACAGGACTGAGTAGAGCCCTCCTGTGTGTTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATCACACCTTCTCAGGGTaGAGTGGTGCCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDHTFSG*SGAWMS
Trigger: GGACATCCAGGCACCACTCCACCCTGAGAAGGTGTG...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATTGTCCAGCAGCTCCTTaGCGATGCTGTAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDCPAAP*RCCSHR
Trigger: CCGATGACTACAGCATCGTCAAGGAGCTGCTGGACA...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATCACTCTCCTGGCCAATaGTGTGCTCCTTCAGTCGCT +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDHSPGQ*CAPSVA
Trigger: AGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTG...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCCAAAGCTTCCTGTCTaGGCTGCAATGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMPKLPV*AAMHAG
Trigger: CCCAGCATGCATTGCAGCTCAGACAGGAAGCTTTGG...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATCCAAAGCTTCCTGTCTaGGCTGCAATGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDPKLPV*AAMHAG
Trigger: CCCAGCATGCATTGCAGCTCAGACAGGAAGCTTTGG...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGGTCCCACAGTAGTGTaGTGTTGTGCCTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWGPTVV*CCASAW
Trigger: CCAAGCAGAGGCACAACATCACACTACTGTGGGACC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp GCTACTTTCCTGGTCCTGTCACTCCCCATGCGTCTATGCTGTGTGACAGGAGAGGGATGCCACCATCAGTaGTGTCCAGCCAAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ATFLVLSLPMRLCCVTGEGCHHQ*CPAKFV
Trigger: CACAAACTTGGCTGGACAGCACTGATGGTGGCATCC...CTCTCCTGTCACACAGCATAGACGCATGGGGAGTGACAGGACCAGGAAAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCAGCAAGCAGGACCTaGACCACACTCTCATTGTGG +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDAASRT*TTLSLW
Trigger: CCACAATGAGAGTGTGGTGCAGGTCCTGCTTGCTGC...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCGCGGCGCCGCTCCTCTaGCTCCCGCTTCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIAAPLL*LPLPLL
Trigger: AAGCAGAGGAAGCGGGAGGCAGAGGAGCGGCGCCGC...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGAGGAAGACTAGAGGGTaGTCCTCATCGTACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMRKTRG*SSSYQP
Trigger: CGGCTGGTACGATGAGGAGCACCCTCTAGTCTTCCT...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGCAATGGTCTTCCCTTTaGCATCTGTCAGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWQWSSL*HLSGGP
Trigger: AGGGCCGCCTGACAGATGGCAAAGGGAAGACCATTG...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp CCGAAGAGCAGGGAAGACACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATAGTAGTGTGATGTTGTaGCTCTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PKSREDTETALGDTGEGDSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAGAGGCACAACATCACACTACT...ATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATATCAACCAACACATCTaGCACCTCGCGGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDINQHI*HLAVPQ
Trigger: CTGTGGGACCGCGAGGTGGCAGATGTGTTGGTTGAT...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGTCCTGCTCATAGGCTaGCGCCAGTTGGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWVLLIG*RQLVYH
Trigger: GTGGTAAACCAACTGGCGGCAGCCTATGAGCAGGAC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp CTGGCCTGGACTCTTCAAAAGTGTCACGATCACCGAAGAGCAGGGAAGACACAGGGGCTCTTGAGGAGGTaGTTGTCCGAATCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LAWTLQKCHDHRRAGKTQGLLRR*LSESST
Trigger: TGTGGAGGATTCGGACAAGCACCTCCTCAAGAGCCC...CTGTGTCTTCCCTGCTCTTCGGTGATCGTGACACTTTTGAAGAGTCCAGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGGGCTCTTGAGGAGGTaGTTGTCCGAATCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWGLLRR*LSESST
Trigger: TGTGGAGGATTCGGACAAGCACCTCCTCAAGAGCCC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAGGGCTCTTGAGGAGGTaGTTGTCCGAATCCTCCACA +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEGLLRR*LSESST
Trigger: TGTGGAGGATTCGGACAAGCACCTCCTCAAGAGCCC...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp GGCTGTGAGTTGGCCCAGGACAGTCTACAGTGGCAGAACATGGAGGTGCAAGCACCTGGATGTCCAGTTTaGGGGTCTTGCTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: GCELAQDSLQWQNMEVQAPGCPV*GSCCPY
Trigger: ATAAGGACAGCAAGACCCGCAAACTGGACATCCAGG...TGCTTGCACCTCCATGTTCTGCCACTGTAGACTGTCCTGGGCCAACTCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATCTCATCCCCAAGGTTTaGGTCAGCTCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDLIPKV*VSSSSK
Trigger: CTTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAG...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGCGATGGCACTCTCCTaGCCAATGATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWAMALS*PMMCSF
Trigger: GAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAGCGATGGCACTCTCCTaGCCAATGATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEAMALS*PMMCSF
Trigger: GAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGC...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GCTACTTTCCTGGTCCTGTCACTCCCCATGCGTCTATGCTGTGTGACAGGAGAGGCCGATGTAGCCTGGTaGAGAACCGATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: ATFLVLSLPMRLCCVTGEADVAW*RTDKLG
Trigger: GCCAAGTTTATCGGTTCTCCACCAGGCTACATCGGC...CTCTCCTGTCACACAGCATAGACGCATGGGGAGTGACAGGACCAGGAAAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATAGTTTCTTGGTCAGCTaGCCACCCTCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDSFLVS*PPSSWP
Trigger: CGGCCATGAAGAGGGTGGCCAGCTGACCAAGAAACT...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp TGGCTAACACACAGGAGGGCTCTACTCAGTCCTGTAGTGGTGATGGCTTCTGCAGATGGTGAGCACATCTaGATGGGCCTTGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: WLTHRRALLSPVVVMASADGEHI*MGLVHL
Trigger: GAGGTGGACAAGGCCCATCCAGATGTGCTCACCATC...TGCAGAAGCCATCACCACTACAGGACTGAGTAGAGCCCTCCTGTGTGTTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGATGGTGAGCACATCTaGATGGGCCTTGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDDGEHI*MGLVHL
Trigger: GAGGTGGACAAGGCCCATCCAGATGTGCTCACCATC...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GGCTGTGAGTTGGCCCAGGACAGTCTACAGTGGCAGAACATGGAGGTGCAAGCATCTGCTTGGCTCTCTTaGCCCAGAAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GCELAQDSLQWQNMEVQASAWLS*PRSSVP
Trigger: AGGAACTGAACTTCTGGGCCAAGAGAGCCAAGCAGA...TGCTTGCACCTCCATGTTCTGCCACTGTAGACTGTCCTGGGCCAACTCACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCTACTTTCCTGGTCCTGTCACTCCCCATGCGTCTATGCTGTGTGACAGGAGAGTGTTGTGCCTCTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ATFLVLSLPMRLCCVTGECCASA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAGAGGCACAACA...CTCTCCTGTCACACAGCATAGACGCATGGGGAGTGACAGGACCAGGAAAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR TCA 90 bp GGCTGTGAGTTGGCCCAGGACAGTCTACAGTGGCAGAACATGGAGGTGCAAGCACTGATAACAGCCTTCTaGCTTCCTGCACGTTATTGG +
Preference number: 4 (lower is better)
Translates to: GCELAQDSLQWQNMEVQALITAF*LPARYW
Trigger: CCAATAACGTGCAGGAAGTCAGAAGGCTGTTATCAG...TGCTTGCACCTCCATGTTCTGCCACTGTAGACTGTCCTGGGCCAACTCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR TCA 90 bp GTATATGTCTGTGTGGGGCAGGAAGTCATGTCACCACGTGTGTGGTCAGAGAACTGTCCAGCAGCTCCTTaGCGATGCTGTAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: VYVCVGQEVMSPRVWSENCPAAP*RCCSHR
Trigger: CCGATGACTACAGCATCGTCAAGGAGCTGCTGGACA...GTTCTCTGACCACACACGTGGTGACATGACTTCCTGCCCCACACAGACATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp CCGAAGAGCAGGGAAGACACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATTGTTGGATGGATTCTTaGTGTAGCACTGAACCACCA +
Preference number: 4 (lower is better)
Translates to: PKSREDTETALGDTGEGDCWMDS*CSTEPP
Trigger: TGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACA...ATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp CCGAAGAGCAGGGAAGACACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATGCCAAGTTTGTGTCTTaGATTGACATCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: PKSREDTETALGDTGEGDAKFVS*IDICTF
Trigger: GAAGGTGCAGATGTCAATGCAAGACACAAACTTGGC...ATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGGATGCCACCATCAGTaGTGTCCAGCCAAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWGCHHQ*CPAKFV
Trigger: CACAAACTTGGCTGGACAGCACTGATGGTGGCATCC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp GAGGGCAAGGTGGATTGGTTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTAGGAAGACTAGAGGGTaGTCCTCATCGTACCAGCCG +
Preference number: 4 (lower is better)
Translates to: EGKVDWLPCHSKGPLLDVRKTRG*SSSYQP
Trigger: CGGCTGGTACGATGAGGAGCACCCTCTAGTCTTCCT...AACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGCTGTCTGAGCTGCAATaGATGCTGGGCGATCTCATC +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWLSELQ*MLGDLI
Trigger: GATGAGATCGCCCAGCATGCATTGCAGCTCAGACAG...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAACTGTCTGAGCTGCAATaGATGCTGGGCGATCTCATC +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEELSELQ*MLGDLI
Trigger: GATGAGATCGCCCAGCATGCATTGCAGCTCAGACAG...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp GAGGGCAAGGTGGATTGGTTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTATCAACCAACACATCTaGCACCTCGCGGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: EGKVDWLPCHSKGPLLDVINQHI*HLAVPQ
Trigger: CTGTGGGACCGCGAGGTGGCAGATGTGTTGGTTGAT...AACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp CACCACACTCTCATTGTGGCTGATGGATGCCACCATCAGTGCTGTCCAGCCAAGGCACCTCCCCGGCTTTaGAGAGATGGAGATTTGATT +
Preference number: 4 (lower is better)
Translates to: HHTLIVADGCHHQCCPAKAPPRL*RDGDLI
Trigger: AATCAAATCTCCATCTCTCCAAAGCCGGGGAGGTGC...CTTGGCTGGACAGCACTGATGGTGGCATCCATCAGCCACAATGAGAGTGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS-3UTR CCA 90 bp AACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGAACTTTGCTGTCTGCTTaGCCAGCTCGGTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: NCLGRHRGRRWKVECTVGTLLSA*PARFSL
Trigger: TAGGGAAAACCGAGCTGGCCAAGCAGACAGCAAAGT...TCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGGCCGATGTAGCCTGGTaGAGAACCGATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMADVAW*RTDKLG
Trigger: GCCAAGTTTATCGGTTCTCCACCAGGCTACATCGGC...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGTGAGCACATCTGGATaGGCCTTGTCCACCTCATCA +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDVSTSG*ALSTSS
Trigger: TGATGAGGTGGACAAGGCCCATCCAGATGTGCTCAC...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGTGAGCACATCTGGATaGGCCTTGTCCACCTCATCA +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWVSTSG*ALSTSS
Trigger: TGATGAGGTGGACAAGGCCCATCCAGATGTGCTCAC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGTCCTTGTTGACCAGCTaGATGAGCTCTGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMSLLTS*MSSEWQ
Trigger: CTGCCACTCAGAGCTCATCCAGCTGGTCAACAAGGA...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTTCTGCTTGGCTCTCTTaGCCCAGAAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSSAWLS*PRSSVP
Trigger: AGGAACTGAACTTCTGGGCCAAGAGAGCCAAGCAGA...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGTGTTGTGCCTCTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMCCASA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAGAGGCACAACA...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCGT +
Preference number: 4 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSSRRSH*SVPETR
Trigger: ACGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp CTGACTTCCTGCACGTTATTGGCCCGGGCAGCTTCCATTAGAGCTGCATCTGCCTGTTGGATGGATTCTTaGTGTAGCACTGAACCACCA +
Preference number: 4 (lower is better)
Translates to: LTSCTLLARAASIRAASACWMDS*CSTEPP
Trigger: TGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACA...GGCAGATGCAGCTCTAATGGAAGCTGCCCGGGCCAATAACGTGCAGGAAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS-3UTR GCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTAGTAGTGTGATGTTGTaGCTCTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAGAGGCACAACATCACACTACT...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCCTGGATGTCCAGTTTaGGGGTCTTGCTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMPGCPV*GSCCPY
Trigger: ATAAGGACAGCAAGACCCGCAAACTGGACATCCAGG...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAACCTGGATGTCCAGTTTaGGGGTCTTGCTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEPGCPV*GSCCPY
Trigger: ATAAGGACAGCAAGACCCGCAAACTGGACATCCAGG...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGCACCTCCCCGGCTTTaGAGAGATGGAGATTTGATT +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWAPPRL*RDGDLI
Trigger: AATCAAATCTCCATCTCTCCAAAGCCGGGGAGGTGC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTGAGCTGCATCCTTGTTaGATGGATTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSELHPC*MDSCCS
Trigger: GCTACAGCAAGAATCCATCCAACAAGGATGCAGCTC...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp TGGCTAACACACAGGAGGGCTCTACTCAGTCCTGTAGTGGTGATGGCTTCTGCAGGACTCCCTGTTCATTaGCAGTCTTGTAGACACTGC +
Preference number: 4 (lower is better)
Translates to: WLTHRRALLSPVVVMASAGLPVH*QSCRHC
Trigger: GCAGTGTCTACAAGACTGCCAATGAACAGGGAGTCC...TGCAGAAGCCATCACCACTACAGGACTGAGTAGAGCCCTCCTGTGTGTTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGGGACTCCCTGTTCATTaGCAGTCTTGTAGACACTGC +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMGLPVH*QSCRHC
Trigger: GCAGTGTCTACAAGACTGCCAATGAACAGGGAGTCC...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAGGACTCCCTGTTCATTaGCAGTCTTGTAGACACTGC +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEGLPVH*QSCRHC
Trigger: GCAGTGTCTACAAGACTGCCAATGAACAGGGAGTCC...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATACTTTGCTGTCTGCTTaGCCAGCTCGGTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDTLLSA*PARFSL
Trigger: TAGGGAAAACCGAGCTGGCCAAGCAGACAGCAAAGT...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCCCAATCTTGTCACTCATCTaGACATCCCCAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: EAAGHWSLWSPCQKRRPPILSLI*TSPRFS
Trigger: TGAAAACCTTGGGGATGTCCAGATGAGTGACAAGAT...TGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GAGGGCAAGGTGGATTGGTTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTTCCTTGTTGACCAGCTaGATGAGCTCTGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EGKVDWLPCHSKGPLLDVSLLTS*MSSEWQ
Trigger: CTGCCACTCAGAGCTCATCCAGCTGGTCAACAAGGA...AACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATTCTGCTTGGCTCTCTTaGCCCAGAAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDSAWLS*PRSSVP
Trigger: AGGAACTGAACTTCTGGGCCAAGAGAGCCAAGCAGA...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGAGGGCACTTGTCCACTaGTTTGTCATTCGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWRALVH*FVIRQL
Trigger: AAGCTGGCGAATGACAAACCAGTGGACAAGTGCCCT...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCTGATAACAGCCTTCTaGCTTCCTGCACGTTATTGG +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMLITAF*LPARYW
Trigger: CCAATAACGTGCAGGAAGTCAGAAGGCTGTTATCAG...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCGT +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDSRRSH*SVPETR
Trigger: ACGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCGT +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMSRRSH*SVPETR
Trigger: ACGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATAGTAGTGTGATGTTGTaGCTCTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAGAGGCACAACATCACACTACT...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGAGCTGCATCCTTGTTaGATGGATTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDELHPC*MDSCCS
Trigger: GCTACAGCAAGAATCCATCCAACAAGGATGCAGCTC...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp CTGGCCTGGACTCTTCAAAAGTGTCACGATCACCGAAGAGCAGGGAAGACACAGACTGTTTCAGTTTCTTaGTCAGCTGGCCACCCTCTT +
Preference number: 4 (lower is better)
Translates to: LAWTLQKCHDHRRAGKTQTVSVS*SAGHPL
Trigger: AAGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGT...CTGTGTCTTCCCTGCTCTTCGGTGATCGTGACACTTTTGAAGAGTCCAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGACTGTTTCAGTTTCTTaGTCAGCTGGCCACCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWTVSVS*SAGHPL
Trigger: AAGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGT...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAACTGTTTCAGTTTCTTaGTCAGCTGGCCACCCTCTT +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEETVSVS*SAGHPL
Trigger: AAGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGT...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCGTGGGCTTCTCAGGGTaGAGTGGTGCCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIVGFSG*SGAWMS
Trigger: GGACATCCAGGCACCACTCCACCCTGAGAAGCCCAC...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR TCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGAGTTCTTGGAGATGGTaGTCTTGTCACTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMSSWRW*SCHSSG
Trigger: TCCAGATGAGTGACAAGATCACCATCTCCAAGAACT...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGTGTTGGATGGATTCTTaGTGTAGCACTGAACCACCA +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWCWMDS*CSTEPP
Trigger: TGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACA...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGATATACTTTGCTGTCTaGTTGGCCAGCTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMIYFAV*LASSVF
Trigger: GAAAACCGAGCTGGCCAAGCAGACAGCAAAGTATAT...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAATATACTTTGCTGTCTaGTTGGCCAGCTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEIYFAV*LASSVF
Trigger: GAAAACCGAGCTGGCCAAGCAGACAGCAAAGTATAT...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGTTTGTGCATATACTTTaGTGTCTGCTTGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWFVHIL*CLLGQL
Trigger: GAGCTGGCCAAGCAGACAGCAAAGTATATGCACAAA...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR GCA 90 bp TCACCTTGCCAAAAACGCAGACCCCCAGACTCATCAGTGAGAGCATTAGATAGACTGTCTGAGCTGCAATaGATGCTGGGCGATCTCATC +
Preference number: 4 (lower is better)
Translates to: SPCQKRRPPDSSVRALDRLSELQ*MLGDLI
Trigger: GATGAGATCGCCCAGCATGCATTGCAGCTCAGACAG...TCTATCTAATGCTCTCACTGATGAGTCTGGGGGTCTGCGTTTTTGGCAAGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGTGCATCCTTGTTGGATaGATTCTTGCTGTAGCACTG +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMCILVG*ILAVAL
Trigger: CAGTGCTACAGCAAGAATCCATCCAACAAGGATGCA...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAATGCATCCTTGTTGGATaGATTCTTGCTGTAGCACTG +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEECILVG*ILAVAL
Trigger: CAGTGCTACAGCAAGAATCCATCCAACAAGGATGCA...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GGATGCCACCATCAGTGCTGTCCAGCCAAGTTTGTGTCTTGCATTGACATCTGCTCCAGCCTTGTTGGATaGATTCTTGCTGTAGCACTG +
Preference number: 4 (lower is better)
Translates to: GCHHQCCPAKFVSCIDICSSLVG*ILAVAL
Trigger: CAGTGCTACAGCAAGAATCCATCCAACAAGGCTGGA...GCAGATGTCAATGCAAGACACAAACTTGGCTGGACAGCACTGATGGTGGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS-3UTR CCA 90 bp GCCACCATCAGTGCTGTCCAGCCAAGTTTGTGTCTTGCATTGACATCTGCACCTAAGCTCCAGCCTTGTTaGATGGATTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ATISAVQPSLCLALTSAPKLQPC*MDSCCS
Trigger: GCTACAGCAAGAATCCATCCAACAAGGCTGGAGCTT...AGGTGCAGATGTCAATGCAAGACACAAACTTGGCTGGACAGCACTGATGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS-3UTR TCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGTTTGTGTCTTGCATTaGCATCTGCACCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWVCVLH*HLHLLI
Trigger: TATCAGAAGGTGCAGATGTCAATGCAAGACACAAAC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR TCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCCACTCTCCTGGCCAATaGTGTGCTCCTTCAGTCGCT +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIHSPGQ*CAPSVA
Trigger: AGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTG...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR TCA 90 bp GAGGGCAAGGTGGATTGGTTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTAGTTCTTGGAGATGGTaGTCTTGTCACTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: EGKVDWLPCHSKGPLLDVSSWRW*SCHSSG
Trigger: TCCAGATGAGTGACAAGATCACCATCTCCAAGAACT...AACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp CTGGCCTGGACTCTTCAAAAGTGTCACGATCACCGAAGAGCAGGGAAGACACAGATCAAAGAGGACTACTaGATTTGGGCACTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LAWTLQKCHDHRRAGKTQIKEDY*IWALFQ
Trigger: CTGAAACAGTGCCCAAATGCAGTAGTCCTCTTTGAT...CTGTGTCTTCCCTGCTCTTCGGTGATCGTGACACTTTTGAAGAGTCCAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGATCAAAGAGGACTACTaGATTTGGGCACTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMIKEDY*IWALFQ
Trigger: CTGAAACAGTGCCCAAATGCAGTAGTCCTCTTTGAT...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GGTGCACCACTGCCTGAGTCCTATCTTCTTCAGCCAGACTTGTTCTCCGCTGCAGCTTCTCCATGTACTTaGTCTCAGAAGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GAPLPESYLLQPDLFSAAASPCT*SQKFSE
Trigger: TTCTGAAAACTTCTGAGACCAAGTACATGGAGAAGC...TGCAGCGGAGAACAAGTCTGGCTGAAGAAGATAGGACTCAGGCAGTGGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGCAGTCGCTGCTCCAGTaGGAAGCGGCGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGQSLLQ*EAAPLL
Trigger: GAGGAGCGGCGCCGCTTCCCACTGGAGCAGCGACTG...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGGAGGACTACTGCATTTaGGCACTGTTTCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMEDYCI*ALFQFL
Trigger: AAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTC...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAAGAGGACTACTGCATTTaGGCACTGTTTCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEEDYCI*ALFQFL
Trigger: AAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTC...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATCTTGTCACTCATCTaGACATCCCCAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWILSLI*TSPRFS
Trigger: TGAAAACCTTGGGGATGTCCAGATGAGTGACAAGAT...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGAGTGAGCTTTCAAGATaGGTCGGATCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWSELSR*VGSHSL
Trigger: AAGAGAATGTGATCCGACCCATCTTGAAAGCTCACT...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp GAACTCATCCCCAAGGTTTGGGTCAGCTCCAGCAGCAAGCAGGACCTGCACCACATTCATATATTTAATTaGACCCAGATAAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELIPKVWVSSSSKQDLHHIHIFN*TQISSS
Trigger: GCTGGAGCTTATCTGGGTCCAATTAAATATATGAAT...GTGGTGCAGGTCCTGCTTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
3UTR CAA 72 bp AGCTGCTTTCACAGTGATGTCCTGCCTTGTTCAGCCTaGAGAGGCAGCCAGCACTTACAAGTCAAACACTTT +
Preference number: 4 (lower is better)
Translates to: SCFHSDVLPCSA*RGSQHLQVKHF
Trigger: AAAGTGTTTGACTTGTAAGTGCTGGCTGCCTCTCAAGGCTGAACAAGGCAGGACATCACTGTGAAAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR TCA 90 bp TACAGTGGCAGAACATGGAGGTGCAAGCAACGCCAAAGCATGAAGGAGCTCACAGTTTGTGTCTTGCATTaGCATCTGCACCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: YSGRTWRCKQRQSMKELTVCVLH*HLHLLI
Trigger: TATCAGAAGGTGCAGATGTCAATGCAAGACACAAAC...TGTGAGCTCCTTCATGCTTTGGCGTTGCTTGCACCTCCATGTTCTGCCACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR TCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATACCAAAGCTTCCTGTCTaGGCTGCAATGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIPKLPV*AAMHAG
Trigger: CCCAGCATGCATTGCAGCTCAGACAGGAAGCTTTGG...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAGCAGCAAGCAGGACCTaGACCACACTCTCATTGTGG +
Preference number: 4 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIAASRT*TTLSLW
Trigger: CCACAATGAGAGTGTGGTGCAGGTCCTGCTTGCTGC...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAGTCCTGCTCATAGGCTaGCGCCAGTTGGTTTACCAC +
Preference number: 4 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIVLLIG*RQLVYH
Trigger: GTGGTAAACCAACTGGCGGCAGCCTATGAGCAGGAC...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGGCTTCTCCATGTACTTaGTCTCAGAAGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWASPCT*SQKFSE
Trigger: TTCTGAAAACTTCTGAGACCAAGTACATGGAGAAGC...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CCA 90 bp TACAGTGGCAGAACATGGAGGTGCAAGCAACGCCAAAGCATGAAGGAGCTCACAGAGGACTACTGCATTTaGGCACTGTTTCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: YSGRTWRCKQRQSMKELTEDYCI*ALFQFL
Trigger: AAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTC...TGTGAGCTCCTTCATGCTTTGGCGTTGCTTGCACCTCCATGTTCTGCCACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp GTATATGTCTGTGTGGGGCAGGAAGTCATGTCACCACGTGTGTGGTCAGAGAACAGTGAGCTTTCAAGATaGGTCGGATCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: VYVCVGQEVMSPRVWSENSELSR*VGSHSL
Trigger: AAGAGAATGTGATCCGACCCATCTTGAAAGCTCACT...GTTCTCTGACCACACACGTGGTGACATGACTTCCTGCCCCACACAGACATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCTCCTTGTTGACCAGCTaGATGAGCTCTGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRISLLTS*MSSEWQ
Trigger: CTGCCACTCAGAGCTCATCCAGCTGGTCAACAAGGA...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGTGCTCCTTCAGTCGCTaGTCCAGTGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGCSFSR*SSGKRR
Trigger: GCGCCGCTTCCCACTGGAGCAGCGACTGAAGGAGCA...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTTCCTCTGAAGGGGGTTaGCTCCTCTGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGSSEGG*LLCPAA
Trigger: AGCTGCTGGACAGAGGAGCCAACCCCCTTCAGAGGA...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCACTTTGCTGTCTGCTTaGCCAGCTCGGTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRITLLSA*PARFSL
Trigger: TAGGGAAAACCGAGCTGGCCAAGCAGACAGCAAAGT...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAGCCGATGTAGCCTGGTaGAGAACCGATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIADVAW*RTDKLG
Trigger: GCCAAGTTTATCGGTTCTCCACCAGGCTACATCGGC...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAGTGAGCACATCTGGATaGGCCTTGTCCACCTCATCA +
Preference number: 4 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIVSTSG*ALSTSS
Trigger: TGATGAGGTGGACAAGGCCCATCCAGATGTGCTCAC...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CAA 72 bp ACACTGAAGTGCAGACCAGGCTTCCTGTTCCTTGCCTaGGAGATCATAACAGACTATGAACCTCACAACCAA +
Preference number: 4 (lower is better)
Translates to: TLKCRPGFLFLA*EIITDYEPHNQ
Trigger: TTGGTTGTGAGGTTCATAGTCTGTTATGATCTCCAAGGCAAGGAACAGGAAGCCTGGTCTGCACTTCAGTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR TCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCCTGATAACAGCCTTCTaGCTTCCTGCACGTTATTGG +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRILITAF*LPARYW
Trigger: CCAATAACGTGCAGGAAGTCAGAAGGCTGTTATCAG...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp AAGGAATTAACTCAAGTCATCAGGCTGGGTAAAAAGTGCCATAACCTGCTGGGCTTTGTGCATATACTTTaGTGTCTGCTTGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KELTQVIRLGKKCHNLLGFVHIL*CLLGQL
Trigger: GAGCTGGCCAAGCAGACAGCAAAGTATATGCACAAA...GCCCAGCAGGTTATGGCACTTTTTACCCAGCCTGATGACTTGAGTTAATTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR GCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATACCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTATCAACCAACACATCTaGCACCTCGCGGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGINQHI*HLAVPQ
Trigger: CTGTGGGACCGCGAGGTGGCAGATGTGTTGGTTGAT...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAGCACCTCCCCGGCTTTaGAGAGATGGAGATTTGATT +
Preference number: 4 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIAPPRL*RDGDLI
Trigger: AATCAAATCTCCATCTCTCCAAAGCCGGGGAGGTGC...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTGATGGTGAGCACATCTaGATGGGCCTTGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGDGEHI*MGLVHL
Trigger: GAGGTGGACAAGGCCCATCCAGATGTGCTCACCATC...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CAA 72 bp TACAAGGCTGGGCTCAAGTGGAAACTTAAGGGTTCTTaGGAAAGTCAGTTGTGTTGGATGGTGTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: YKAGLKWKLKGS*ESQLCWMVFCR
Trigger: CCTGCAAAACACCATCCAACACAACTGACTTTCCAAAGAACCCTTAAGTTTCCACTTGAGCCCAGCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR TCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCAGTTCTTGGAGATGGTaGTCTTGTCACTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRISSWRW*SCHSSG
Trigger: TCCAGATGAGTGACAAGATCACCATCTCCAAGAACT...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCTGTTGGATGGATTCTTaGTGTAGCACTGAACCACCA +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRICWMDS*CSTEPP
Trigger: TGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACA...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTGGATGCCACCATCAGTaGTGTCCAGCCAAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGGCHHQ*CPAKFV
Trigger: CACAAACTTGGCTGGACAGCACTGATGGTGGCATCC...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCTTTGTGCATATACTTTaGTGTCTGCTTGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIFVHIL*CLLGQL
Trigger: GAGCTGGCCAAGCAGACAGCAAAGTATATGCACAAA...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAATCTTGTCACTCATCTaGACATCCCCAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIILSLI*TSPRFS
Trigger: TGAAAACCTTGGGGATGTCCAGATGAGTGACAAGAT...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGTGTTGTGCCTCTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGCCASA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAGAGGCACAACA...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTAGTGAGCTTTCAAGATaGGTCGGATCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGSELSR*VGSHSL
Trigger: AAGAGAATGTGATCCGACCCATCTTGAAAGCTCACT...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CCA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTGCTTCTCCATGTACTTaGTCTCAGAAGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGASPCT*SQKFSE
Trigger: TTCTGAAAACTTCTGAGACCAAGTACATGGAGAAGC...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR GCA 90 bp TTGATCTTTTTGGATTGGTCTAAAGCATTTAGAACTCATCCTCTAGTATTTGGGATCAAAGAGGACTACTaGATTTGGGCACTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LIFLDWSKAFRTHPLVFGIKEDY*IWALFQ
Trigger: CTGAAACAGTGCCCAAATGCAGTAGTCCTCTTTGAT...CCCAAATACTAGAGGATGAGTTCTAAATGCTTTAGACCAATCCAAAAAGATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CAA 72 bp GGCAGCCAGCACTTACAAGTCAAACACTTTAGTTTCTaGGTGGTCGATCATATACATACAAATATGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GSQHLQVKHFSF*VVDHIHTNMFS
Trigger: AGAAAACATATTTGTATGTATATGATCGACCACCAAGAAACTAAAGTGTTTGACTTGTAAGTGCTGGCTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CAA 72 bp CTTTTACAACTGCCTTTGGGTTTTCTAAATGCACAATaGCACATCAGAATTTACTTTCCACAATTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLQLPLGFLNAQ*HIRIYFPQFVP
Trigger: GGGAACAAATTGTGGAAAGTAAATTCTGATGTGCAATTGTGCATTTAGAAAACCCAAAGGCAGTTGTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
3UTR CAA 72 bp TTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTaGGGTTTTCTAAATGCACAATTGCACATCAGAATT +
Preference number: 4 (lower is better)
Translates to: LVSHQVKLLQLP*GFLNAQLHIRI
Trigger: AATTCTGATGTGCAATTGTGCATTTAGAAAACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS TCA 90 bp CCCAAGCGGCAGCTCTCAACCGCTGCGGCTCCCCGCGGTCTCCGGTaGCAACGCCACGGCCGTAAGCACCTCCCCGGCTTTGGAGAGATG +
Preference number: 5 (lower is better)
Translates to: PKRQLSTAAAPRGLR*QRHGRKHLPGFGEM
Trigger: CATCTCTCCAAAGCCGGGGAGGTGCTTACGGCCGTGGCGTTGTCACCGGAGACCGCGGGGAGCCGCAGCGGTTGAGAGCTGCCGCTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS CCA 90 bp TTCTTCGGGGCTAGGACCGCGTTCCGACGAGGCGGCAGTCAGGTATaGGATCTCGGTGCGTTCTCCACGGCGCCCCCAGGTGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: FFGARTAFRRGGSQV*DLGAFSTAPPGGCP
Trigger: GGGGCAGCCACCTGGGGGCGCCGTGGAGAACGCACCGAGATCCCATACCTGACTGCCGCCTCGTCGGAACGCGGTCCTAGCCCCGAAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS TCA 90 bp TCCGGATCGCAGCACCGACGGTGGCGATGGCACTCTCCTGGCCAATaGTGTGCTCCTTCAGTCGCTGCTCCAGTGGGAAGCGGCGCCGCT +
Preference number: 5 (lower is better)
Translates to: SGSQHRRWRWHSPGQ*CAPSVAAPVGSGAA
Trigger: AGCGGCGCCGCTTCCCACTGGAGCAGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGCCACCGTCGGTGCTGCGATCCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 90 bp GTGGCGATGGCACTCTCCTGGCCAATGATGTGCTCCTTCAGTCGCTaGTCCAGTGGGAAGCGGCGCCGCTCCTCTGCCTCCCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VAMALSWPMMCSFSR*SSGKRRRSSASRFL
Trigger: GAGGAAGCGGGAGGCAGAGGAGCGGCGCCGCTTCCCACTGGAGCAGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 90 bp CCACCAGCGCCATGGCCAAGGCCCACATGCCCAGACCCGTCTTGTTaGGGACCCCATTCCAGCTGTCTTGTCCCGGGAGTGTTTCTTCGG +
Preference number: 5 (lower is better)
Translates to: PPAPWPRPTCPDPSC*GPHSSCLVPGVFLR
Trigger: CCGAAGAAACACTCCCGGGACAAGACAGCTGGAATGGGGTCCCCAACAAGACGGGTCTGGGCATGTGGGCCTTGGCCATGGCGCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS CCA 90 bp TCCTTCCTCCGGATCGCAGCACCGACGGTGGCGATGGCACTCTCCTaGCCAATGATGTGCTCCTTCAGTCGCTGCTCCAGTGGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SFLRIAAPTVAMALS*PMMCSFSRCSSGKR
Trigger: CCGCTTCCCACTGGAGCAGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGCCACCGTCGGTGCTGCGATCCGGAGGAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 90 bp CGCTTCTCAGCCTGGGGTGAGGGCAGCTCAGGGCTCTTGAGGAGGTaGTTGTCCGAATCCTCCACAGTGATACGCAGGGTGCAACCCCCT +
Preference number: 5 (lower is better)
Translates to: RFSAWGEGSSGLLRR*LSESSTVIRRVQPP
Trigger: AGGGGGTTGCACCCTGCGTATCACTGTGGAGGATTCGGACAAGCACCTCCTCAAGAGCCCTGAGCTGCCCTCACCCCAGGCTGAGAAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 90 bp GTGCTCCTTCAGTCGCTGCTCCAGTGGGAAGCGGCGCCGCTCCTCTaGCTCCCGCTTCCTCTGCTTCTCCATGTACTTGGTCTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: VLLQSLLQWEAAPLL*LPLPLLLHVLGLRS
Trigger: ACTTCTGAGACCAAGTACATGGAGAAGCAGAGGAAGCGGGAGGCAGAGGAGCGGCGCCGCTTCCCACTGGAGCAGCGACTGAAGGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 90 bp TCTTGCTGTAGCACTGAACCACCAGCGCCATGGCCAAGGCCCACATaGCCAGACCCGTCTTGTTGGGGACCCCATTCCAGCTGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: SCCSTEPPAPWPRPT*PDPSCWGPHSSCLV
Trigger: GACAAGACAGCTGGAATGGGGTCCCCAACAAGACGGGTCTGGGCATGTGGGCCTTGGCCATGGCGCTGGTGGTTCAGTGCTACAGCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS CCA 90 bp CCTTGTTGGATGGATTCTTGCTGTAGCACTGAACCACCAGCGCCATaGCCAAGGCCCACATGCCCAGACCCGTCTTGTTGGGGACCCCAT +
Preference number: 5 (lower is better)
Translates to: PCWMDSCCSTEPPAP*PRPTCPDPSCWGPH
Trigger: ATGGGGTCCCCAACAAGACGGGTCTGGGCATGTGGGCCTTGGCCATGGCGCTGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS TCA 90 bp AATGATCTCCAGTCGCAATGTAGGTGGACGCTTCTCAGCCTGGGGTaGGGGCAGCTCAGGGCTCTTGAGGAGGTGCTTGTCCGAATCCTC +
Preference number: 5 (lower is better)
Translates to: NDLQSQCRWTLLSLG*GQLRALEEVLVRIL
Trigger: GAGGATTCGGACAAGCACCTCCTCAAGAGCCCTGAGCTGCCCTCACCCCAGGCTGAGAAGCGTCCACCTACATTGCGACTGGAGATCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 90 bp CCCGGGCAGCTTCCATTAGAGCTGCATCCTTGTTGGATGGATTCTTaGTGTAGCACTGAACCACCAGCGCCATGGCCAAGGCCCACATGC +
Preference number: 5 (lower is better)
Translates to: PGQLPLELHPCWMDS*CSTEPPAPWPRPTC
Trigger: GCATGTGGGCCTTGGCCATGGCGCTGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACAAGGATGCAGCTCTAATGGAAGCTGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATAGCCTGGATGTCCAGTTaGCGGGTCTTGCTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: SPGWPAALSADQASLDFIAWMSS*RVLLSL
Trigger: TAAGGACAGCAAGACCCGCAAACTGGACATCCAGGC...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS CCA 90 bp ACCGGGACTCCTAGCCACCTCCTGAACTCCAGGGCACTTGTCCACTaGTTTGTCATTCGCCAGCTTGCACAGTCTTGTCTCCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: TGTPSHLLNSRALVH*FVIRQLAQSCLPSS
Trigger: GGAAGATGGGAGACAAGACTGTGCAAGCTGGCGAATGACAAACCAGTGGACAAGTGCCCTGGAGTTCAGGAGGTGGCTAGGAGTCCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp CCGAAGAGCAGGGAAGACACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATAGCACCTCCCCGGCTTaGGAGAGATGGAGATTTGAT +
Preference number: 5 (lower is better)
Translates to: PKSREDTETALGDTGEGDSTSPA*ERWRFD
Trigger: ATCAAATCTCCATCTCTCCAAAGCCGGGGAGGTGCT...ATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp CTGACTTCCTGCACGTTATTGGCCCGGGCAGCTTCCATTAGAGCTGCATCTGCCCCCATTCCAGCTGTCTaGTCCCGGGAGTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LTSCTLLARAASIRAASAPIPAV*SRECFF
Trigger: GAAGAAACACTCCCGGGACAAGACAGCTGGAATGGG...GGCAGATGCAGCTCTAATGGAAGCTGCCCGGGCCAATAACGTGCAGGAAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS-3UTR CAA 90 bp AAACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGTCAATGGTCTTCCCTTaGCCATCTGTCAGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: KLPWATQGKAMESRMHCGSMVFP*PSVRRP
Trigger: GGGCCGCCTGACAGATGGCAAAGGGAAGACCATTGA...CCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp GGCTGTGAGTTGGCCCAGGACAGTCTACAGTGGCAGAACATGGAGGTGCAAGCAATGTTGTGCCTCTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GCELAQDSLQWQNMEVQAMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAGAGGCACAACAT...TGCTTGCACCTCCATGTTCTGCCACTGTAGACTGTCCTGGGCCAACTCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp GCTACTTTCCTGGTCCTGTCACTCCCCATGCGTCTATGCTGTGTGACAGGAGAGCCCATTCCAGCTGTCTaGTCCCGGGAGTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: ATFLVLSLPMRLCCVTGEPIPAV*SRECFF
Trigger: GAAGAAACACTCCCGGGACAAGACAGCTGGAATGGG...CTCTCCTGTCACACAGCATAGACGCATGGGGAGTGACAGGACCAGGAAAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTACTTCCTGCACGTTATaGGCCCGGGCAGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSTSCTL*ARAASI
Trigger: AATGGAAGCTGCCCGGGCCAATAACGTGCAGGAAGT...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGTCAATGGTCTTCCCTTaGCCATCTGTCAGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWSMVFP*PSVRRP
Trigger: GGGCCGCCTGACAGATGGCAAAGGGAAGACCATTGA...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS GCA 90 bp GTTTTCCCTATTCCAGACGATCCCAAGAAGAGGAAGACTAGAGGGTaGTCCTCATCGTACCAGCCGTTCTCCTTCCTCCGGATCGCAGCA +
Preference number: 5 (lower is better)
Translates to: VFPIPDDPKKRKTRG*SSSYQPFSFLRIAA
Trigger: TGCTGCGATCCGGAGGAAGGAGAACGGCTGGTACGATGAGGAGCACCCTCTAGTCTTCCTCTTCTTGGGATCGTCTGGAATAGGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 90 bp TTTCTTGGTCAGCTGGCCACCCTCTTCATGGCCGATGTAGCCTGGTaGAGAACCGATAAACTTGGCTACCTCATGTCGCTCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: FLGQLATLFMADVAW*RTDKLGYLMSLLEL
Trigger: GAGTTCCAGGAGCGACATGAGGTAGCCAAGTTTATCGGTTCTCCACCAGGCTACATCGGCCATGAAGAGGGTGGCCAGCTGACCAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 90 bp CAGTTTCTTGGTCAGCTGGCCACCCTCTTCATGGCCGATGTAGCCTaGTGGAGAACCGATAAACTTGGCTACCTCATGTCGCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: QFLGQLATLFMADVA*WRTDKLGYLMSLLE
Trigger: TTCCAGGAGCGACATGAGGTAGCCAAGTTTATCGGTTCTCCACCAGGCTACATCGGCCATGAAGAGGGTGGCCAGCTGACCAAGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 90 bp CGGCCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATaGGCCTTGTCCACCTCATCAAAGAGGACTACTGCATTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: RPSSNSCSMMVSTSG*ALSTSSKRTTAFGH
Trigger: GTGCCCAAATGCAGTAGTCCTCTTTGATGAGGTGGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 90 bp CAGGCGGCCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTaGATGGGCCTTGTCCACCTCATCAAAGAGGACTACTGCATTTGG +
Preference number: 5 (lower is better)
Translates to: QAALIKQLQHDGEHI*MGLVHLIKEDYCIW
Trigger: CCAAATGCAGTAGTCCTCTTTGATGAGGTGGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGGCCGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGCCCATTCCAGCTGTCTaGTCCCGGGAGTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWPIPAV*SRECFF
Trigger: GAAGAAACACTCCCGGGACAAGACAGCTGGAATGGG...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAACCCATTCCAGCTGTCTaGTCCCGGGAGTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VQKSTEGSHQELSQGTEEPIPAV*SRECFF
Trigger: GAAGAAACACTCCCGGGACAAGACAGCTGGAATGGG...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATACTTCCTGCACGTTATaGGCCCGGGCAGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDTSCTL*ARAASI
Trigger: AATGGAAGCTGCCCGGGCCAATAACGTGCAGGAAGT...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGACTCATCCCCAAGGTTaGGGTCAGCTCCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWTHPQG*GQLQQQ
Trigger: TTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAGT...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp CCCCATCTCAGAGCTGAGGTGTTCACCTGGGACCATGGTCCCACCCCAGAGGAACGGATGAAGCCCTTTTaGGCATCTTTGTGCATATAC +
Preference number: 5 (lower is better)
Translates to: PHLRAEVFTWDHGPTPEERMKPF*ASLCIY
Trigger: GTATATGCACAAAGATGCCAAAAAGGGCTTCATCCG...TTCCTCTGGGGTGGGACCATGGTCCCAGGTGAACACCTCAGCTCTGAGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp GGTGCACCACTGCCTGAGTCCTATCTTCTTCAGCCAGACTTGTTCTCCGCTGCAGGAGAACCGATAAACTaGGCTACCTCATGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: GAPLPESYLLQPDLFSAAGEPIN*ATSCRS
Trigger: GGAGCGACATGAGGTAGCCAAGTTTATCGGTTCTCC...TGCAGCGGAGAACAAGTCTGGCTGAAGAAGATAGGACTCAGGCAGTGGTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTGGAGAACCGATAAACTaGGCTACCTCATGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSGEPIN*ATSCRS
Trigger: GGAGCGACATGAGGTAGCCAAGTTTATCGGTTCTCC...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp AACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGACACTGTTTCAGTTTCTaGGTCAGCTGGCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: NCLGRHRGRRWKVECTVGHCFSF*VSWPPS
Trigger: AGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGTG...TCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTCACTGTTTCAGTTTCTaGGTCAGCTGGCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSHCFSF*VSWPPS
Trigger: AGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGTG...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp GAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCCCAATGAAGATGGCATCCTaGCAGTCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: EAAGHWSLWSPCQKRRPPMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGACTGCAAGGATGCCATCTTCAT...TGGGGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp CCGAAGAGCAGGGAAGACACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATAAGTTCAGTTCCTTGTaGACCAGCTGGATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: PKSREDTETALGDTGEGDKFSSL*TSWMSS
Trigger: AGAGCTCATCCAGCTGGTCAACAAGGAACTGAACTT...ATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCTCTGCTTGGCTCTCTaGGCCCAGAAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMLCLAL*AQKFSS
Trigger: GGAACTGAACTTCTGGGCCAAGAGAGCCAAGCAGAG...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATATGTTGTGCCTCTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAGAGGCACAACAT...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCCTGGATGTCCAGTTaGCGGGTCTTGCTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDAWMSS*RVLLSL
Trigger: TAAGGACAGCAAGACCCGCAAACTGGACATCCAGGC...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS TCA 90 bp CCAGAGAATGGACTCCCTGTTCATTGGCAGTCTTGTAGACACTGCTaGACTCATCCCCAAGGTTTGGGTCAGCTCCAGCAGCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PENGLPVHWQSCRHC*THPQGLGQLQQQAG
Trigger: TCCTGCTTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAGTTCAGCAGTGTCTACAAGACTGCCAATGAACAGGGAGTCCATTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 90 bp CCTGAACTCCAGGGCACTTGTCCACTGGTTTGTCATTCGCCAGCTTaGACAGTCTTGTCTCCCATCTTCCAGAGAATGGACTCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: PELQGTCPLVCHSPA*TVLSPIFQRMDSLF
Trigger: GAACAGGGAGTCCATTCTCTGGAAGATGGGAGACAAGACTGTGCAAGCTGGCGAATGACAAACCAGTGGACAAGTGCCCTGGAGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS CCA 90 bp CCTCATCAAAGAGGACTACTGCATTTGGGCACTGTTTCAGTTTCTTaGTCAGCTGGCCACCCTCTTCATGGCCGATGTAGCCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PHQRGLLHLGTVSVS*SAGHPLHGRCSLVE
Trigger: CTCCACCAGGCTACATCGGCCATGAAGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTCTTTGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp AGGGAGGCAGCAGGGCATTGGTCTCTGTGGTCACCTTGCCAAAAACGCAGACCCTGGAGAGATGGAGATTaGATTAACCCTAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: REAAGHWSLWSPCQKRRPWRDGD*INPRKS
Trigger: GCTCTTCCTAGGGTTAATCAAATCTCCATCTCTCCA...GGGTCTGCGTTTTTGGCAAGGTGACCACAGAGACCAATGCCCTGCTGCCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp AGTCCTGGCTGGCCCGCAGCTCTCTCTGCAGACCAGGCCAGTCTCGACTTTATAATTAGAGCTGCATCCTaGTTGGATGGATTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SPGWPAALSADQASLDFIIRAAS*LDGFLL
Trigger: CAGCAAGAATCCATCCAACAAGGATGCAGCTCTAAT...TATAAAGTCGAGACTGGCCTGGTCTGCAGAGAGAGCTGCGGGCCAGCCAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATTACTTTGCTGTCTGCTaGGCCAGCTCGGTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDYFAVC*ASSVFP
Trigger: AGGGAAAACCGAGCTGGCCAAGCAGACAGCAAAGTA...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGGGAGAACCGATAAACTaGGCTACCTCATGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMGEPIN*ATSCRS
Trigger: GGAGCGACATGAGGTAGCCAAGTTTATCGGTTCTCC...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCACTGTTTCAGTTTCTaGGTCAGCTGGCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMHCFSF*VSWPPS
Trigger: AGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGTG...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp TGGCTAACACACAGGAGGGCTCTACTCAGTCCTGTAGTGGTGATGGCTTCTGCAACATCTGGATGGGCCTaGTCCACCTCATCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: WLTHRRALLSPVVVMASATSGWA*STSSKR
Trigger: CCTCTTTGATGAGGTGGACAAGGCCCATCCAGATGT...TGCAGAAGCCATCACCACTACAGGACTGAGTAGAGCCCTCCTGTGTGTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGACATCTGGATGGGCCTaGTCCACCTCATCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMTSGWA*STSSKR
Trigger: CCTCTTTGATGAGGTGGACAAGGCCCATCCAGATGT...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp GAGGGCAAGGTGGATTGGTTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCTCTGCTTGGCTCTCTaGGCCCAGAAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: EGKVDWLPCHSKGPLLDVLCLAL*AQKFSS
Trigger: GGAACTGAACTTCTGGGCCAAGAGAGCCAAGCAGAG...AACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAACCAATCCACCTTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGCCAGCTTGCACAGTCTaGTCTCCCATCTTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWPACTV*SPIFQR
Trigger: TCTCTGGAAGATGGGAGACAAGACTGTGCAAGCTGG...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGCACTTGTCCACTGGTTaGTCATTCGCCAGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWHLSTG*SFASLH
Trigger: GTGCAAGCTGGCGAATGACAAACCAGTGGACAAGTG...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS CCA 90 bp TTCATTGGCAGTCTTGTAGACACTGCTGAACTCATCCCCAAGGTTTaGGTCAGCTCCAGCAGCAAGCAGGACCTGCACCACACTCTCATT +
Preference number: 5 (lower is better)
Translates to: FIGSLVDTAELIPKV*VSSSSKQDLHHTLI
Trigger: AATGAGAGTGTGGTGCAGGTCCTGCTTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAGTTCAGCAGTGTCTACAAGACTGCCAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp AAACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGGCTGTCCAGCCAAGTTaGTGTCTTGCATTGACATCT +
Preference number: 5 (lower is better)
Translates to: KLPWATQGKAMESRMHCGAVQPS*CLALTS
Trigger: AGATGTCAATGCAAGACACAAACTTGGCTGGACAGC...CCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTGCTGTCCAGCCAAGTTaGTGTCTTGCATTGACATCT +
Preference number: 5 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSAVQPS*CLALTS
Trigger: AGATGTCAATGCAAGACACAAACTTGGCTGGACAGC...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp AACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGACTTTGTGCATATACTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: NCLGRHRGRRWKVECTVGLCAYT*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCAAAGTATATGCACAAAG...TCCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTCTTTGTGCATATACTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSLCAYT*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCAAAGTATATGCACAAAG...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp CCGAAGAGCAGGGAAGACACAGAAACTGCCTTGGGCGACACAGGGGAAGGCGATCCCTTTTTGGCATCTTaGTGCATATACTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: PKSREDTETALGDTGEGDPFLAS*CIYFAV
Trigger: GACAGCAAAGTATATGCACAAAGATGCCAAAAAGGG...ATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTTCTGTGTCTTCCCTGCTCTTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATCAGAAGTTCAGTTCCTaGTTGACCAGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDQKFSS*LTSWMS
Trigger: GCTCATCCAGCTGGTCAACAAGGAACTGAACTTCTG...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATTTGTCATTCGCCAGCTaGCACAGTCTTGTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDLSFAS*HSLVSH
Trigger: ATGGGAGACAAGACTGTGCAAGCTGGCGAATGACAA...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS TCA 90 bp GGTTTTCAGCGATTCGATTTCGGCTCATCTCCAAAGCTTCCTGTCTaGGCTGCAATGCATGCTGGGCGATCTCATCACTGGCTACATTGG +
Preference number: 5 (lower is better)
Translates to: GFQRFDFGSSPKLPV*AAMHAGRSHHWLHW
Trigger: CCAATGTAGCCAGTGATGAGATCGCCCAGCATGCATTGCAGCTCAGACAGGAAGCTTTGGAGATGAGCCGAAATCGAATCGCTGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 90 bp GTCGAGCCGGATGAAGCCCTTTTTGGCATCTTTGTGCATATACTTTaGTGTCTGCTTGGCCAGCTCGGTTTTCCCTATTCCAGACGATCC +
Preference number: 5 (lower is better)
Translates to: VEPDEALFGIFVHIL*CLLGQLGFPYSRRS
Trigger: GGATCGTCTGGAATAGGGAAAACCGAGCTGGCCAAGCAGACAGCAAAGTATATGCACAAAGATGCCAAAAAGGGCTTCATCCGGCTCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 90 bp TCAGCGATTCGATTTCGGCTCATCTCCAAAGCTTCCTGTCTGAGCTaGAATGCATGCTGGGCGATCTCATCACTGGCTACATTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SAIRFRLISKASCLS*NACWAISSLATLEV
Trigger: GACTTCCAATGTAGCCAGTGATGAGATCGCCCAGCATGCATTGCAGCTCAGACAGGAAGCTTTGGAGATGAGCCGAAATCGAATCGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 90 bp ATCTGGATGGGCCTTGTCCACCTCATCAAAGAGGACTACTGCATTTaGGCACTGTTTCAGTTTCTTGGTCAGCTGGCCACCCTCTTCATG +
Preference number: 5 (lower is better)
Translates to: IWMGLVHLIKEDYCI*ALFQFLGQLATLFM
Trigger: CATGAAGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTCTTTGATGAGGTGGACAAGGCCCATCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp CCTTCTGATAACAGCCTTCTGACTTCCTGCACGTTATTGGCCCGGGCAGCTTCCTGGAGAGATGGAGATTaGATTAACCCTAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PSDNSLLTSCTLLARAASWRDGD*INPRKS
Trigger: GCTCTTCCTAGGGTTAATCAAATCTCCATCTCTCCA...GGAAGCTGCCCGGGCCAATAACGTGCAGGAAGTCAGAAGGCTGTTATCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS-3UTR CAA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTTGGAGAGATGGAGATTaGATTAACCCTAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSWRDGD*INPRKS
Trigger: GCTCTTCCTAGGGTTAATCAAATCTCCATCTCTCCA...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp GCAGGGTCTCATGTAGGTCAGCTGGCCTCACAGTCACTACCCAGGGATGATTCTATTAGAGCTGCATCCTaGTTGGATGGATTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AGSHVGQLASQSLPRDDSIRAAS*LDGFLL
Trigger: CAGCAAGAATCCATCCAACAAGGATGCAGCTCTAAT...AGAATCATCCCTGGGTAGTGACTGTGAGGCCAGCTGACCTACATGAGACCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp GCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCTGTCCAGCCAAGTTaGTGTCTTGCATTGACATCT +
Preference number: 5 (lower is better)
Translates to: AMPQQGAFIRCSGHRQVDAVQPS*CLALTS
Trigger: AGATGTCAATGCAAGACACAAACTTGGCTGGACAGC...ATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCTTTGTGCATATACTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMLCAYT*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCAAAGTATATGCACAAAG...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGAAGATGGCATCCTaGCAGTCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGACTGCAAGGATGCCATCTTCAT...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGAAGTTCAGTTCCTTGTaGACCAGCTGGATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWKFSSL*TSWMSS
Trigger: AGAGCTCATCCAGCTGGTCAACAAGGAACTGAACTT...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGTGGAGAGATGGAGATTaGATTAACCCTAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMWRDGD*INPRKS
Trigger: GCTCTTCCTAGGGTTAATCAAATCTCCATCTCTCCA...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATTAGAGCTGCATCCTaGTTGGATGGATTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWIRAAS*LDGFLL
Trigger: CAGCAAGAATCCATCCAACAAGGATGCAGCTCTAAT...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp AAGGAATTAACTCAAGTCATCAGGCTGGGTAAAAAGTGCCATAACCTGCTGGGCACTTCCTGCACGTTATaGGCCCGGGCAGCTTCCATT +
Preference number: 5 (lower is better)
Translates to: KELTQVIRLGKKCHNLLGTSCTL*ARAASI
Trigger: AATGGAAGCTGCCCGGGCCAATAACGTGCAGGAAGT...GCCCAGCAGGTTATGGCACTTTTTACCCAGCCTGATGACTTGAGTTAATTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp AAACTGCCTTGGGCGACACAGGGGAAGGCGATGGAAAGTAGAATGCACTGTGGGAGTTTGTGTCTTGCATaGACATCTGCACCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: KLPWATQGKAMESRMHCGSLCLA*TSAPSD
Trigger: ATCAGAAGGTGCAGATGTCAATGCAAGACACAAACT...CCCACAGTGCATTCTACTTTCCATCGCCTTCCCCTGTGTCGCCCAAGGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp TCACCTTGCCAAAAACGCAGACCCCCAGACTCATCAGTGAGAGCATTAGATAGATACTTTGCTGTCTGCTaGGCCAGCTCGGTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: SPCQKRRPPDSSVRALDRYFAVC*ASSVFP
Trigger: AGGGAAAACCGAGCTGGCCAAGCAGACAGCAAAGTA...TCTATCTAATGCTCTCACTGATGAGTCTGGGGGTCTGCGTTTTTGGCAAGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGCGGATGAAGCCCTTTTaGGCATCTTTGTGCATATAC +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWRMKPF*ASLCIY
Trigger: GTATATGCACAAAGATGCCAAAAAGGGCTTCATCCG...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp GTACAGAAGTCCACTGAGGGAAGCCATCAGGAACTGAGCCAAGGCACTGAGGAACGGATGAAGCCCTTTTaGGCATCTTTGTGCATATAC +
Preference number: 5 (lower is better)
Translates to: VQKSTEGSHQELSQGTEERMKPF*ASLCIY
Trigger: GTATATGCACAAAGATGCCAAAAAGGGCTTCATCCG...TTCCTCAGTGCCTTGGCTCAGTTCCTGATGGCTTCCCTCAGTGGACTTCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp AAAACCTGGTGGTGTGTCTTGCTGCTTCTGAGGACGCGGGCTGATTGGCACAGTTCATCACTGGCTACATaGGAAGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: KTWWCVLLLLRTRADWHSSSLAT*EVMMKM
Trigger: CATCTTCATCATGACTTCCAATGTAGCCAGTGATGA...ACTGTGCCAATCAGCCCGCGTCCTCAGAAGCAGCAAGACACACCACCAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGAGTTTGTGTCTTGCATaGACATCTGCACCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMSLCLA*TSAPSD
Trigger: ATCAGAAGGTGCAGATGTCAATGCAAGACACAAACT...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCACTCATCCCCAAGGTTaGGGTCAGCTCCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRITHPQG*GQLQQQ
Trigger: TTGCTGCTGGAGCTGACCCAAACCTTGGGGATGAGT...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGTGCTTCTCCATGTACTaGGTCTCAGAAGTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWCFSMY*VSEVFR
Trigger: TCTGAAAACTTCTGAGACCAAGTACATGGAGAAGCA...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp CCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGATGCCCTTTTTGGCATCTTaGTGCATATACTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: PCHSKGPLLDVQGTDRWMPFLAS*CIYFAV
Trigger: GACAGCAAAGTATATGCACAAAGATGCCAAAAAGGG...CATCCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS-3UTR CAA 90 bp TTGCCATGCCACAGCAAGGGGCCTTTATTAGATGTTCAGGGCACAGACAGGTGGTCATCACTGGCTACATaGGAAGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: LPCHSKGPLLDVQGTDRWSSLAT*EVMMKM
Trigger: CATCTTCATCATGACTTCCAATGTAGCCAGTGATGA...CCACCTGTCTGTGCCCTGAACATCTAATAAAGGCCCCTTGCTGTGGCATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS CCA 90 bp ATTCATATATTTAATTGGACCCAGATAAGCTCCAGCCTTGTTGGATaGATTCTTGCTGTAGCACTGAACCACCAGCGCCATGGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: IHIFNWTQISSSLVG*ILAVALNHQRHGQG
Trigger: GCCTTGGCCATGGCGCTGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACAAGGCTGGAGCTTATCTGGGTCCAATTAAATATATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS-3UTR CAA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCTACTTTGCTGTCTGCTaGGCCAGCTCGGTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIYFAVC*ASSVFP
Trigger: AGGGAAAACCGAGCTGGCCAAGCAGACAGCAAAGTA...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp GTATATGTCTGTGTGGGGCAGGAAGTCATGTCACCACGTGTGTGGTCAGAGAACTCATCACTGGCTACATaGGAAGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: VYVCVGQEVMSPRVWSENSSLAT*EVMMKM
Trigger: CATCTTCATCATGACTTCCAATGTAGCCAGTGATGA...GTTCTCTGACCACACACGTGGTGACATGACTTCCTGCCCCACACAGACATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAATGTTGTGCCTCTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ERATMDHTNYLFKRQRLIMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAGAGGCACAACAT...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTTCAATGGTCTTCCCTTaGCCATCTGTCAGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGSMVFP*PSVRRP
Trigger: GGGCCGCCTGACAGATGGCAAAGGGAAGACCATTGA...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCCAGAAGTTCAGTTCCTaGTTGACCAGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIQKFSS*LTSWMS
Trigger: GCTCATCCAGCTGGTCAACAAGGAACTGAACTTCTG...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCATGAAGATGGCATCCTaGCAGTCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGACTGCAAGGATGCCATCTTCAT...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCAAGTTCAGTTCCTTGTaGACCAGCTGGATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRIKFSSL*TSWMSS
Trigger: AGAGCTCATCCAGCTGGTCAACAAGGAACTGAACTT...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTCTCTGCTTGGCTCTCTaGGCCCAGAAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGLCLAL*AQKFSS
Trigger: GGAACTGAACTTCTGGGCCAAGAGAGCCAAGCAGAG...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTGCCTGGATGTCCAGTTaGCGGGTCTTGCTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGAWMSS*RVLLSL
Trigger: TAAGGACAGCAAGACCCGCAAACTGGACATCCAGGC...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp AAGGAATTAACTCAAGTCATCAGGCTGGGTAAAAAGTGCCATAACCTGCTGGGCTGCTTCTCCATGTACTaGGTCTCAGAAGTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: KELTQVIRLGKKCHNLLGCFSMY*VSEVFR
Trigger: TCTGAAAACTTCTGAGACCAAGTACATGGAGAAGCA...GCCCAGCAGGTTATGGCACTTTTTACCCAGCCTGATGACTTGAGTTAATTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001884.14
CDS-3UTR CAA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTACATCTGGATGGGCCTaGTCCACCTCATCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGTSGWA*STSSKR
Trigger: CCTCTTTGATGAGGTGGACAAGGCCCATCCAGATGT...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp TTCCGTTTACTTACTTGGAACTTCTACATAGTCAGAGGTGACACTGGGAGGATCTGCTTCTCCATGTACTaGGTCTCAGAAGTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: FRLLTWNFYIVRGDTGRICFSMY*VSEVFR
Trigger: TCTGAAAACTTCTGAGACCAAGTACATGGAGAAGCA...GATCCTCCCAGTGTCACCTCTGACTATGTAGAAGTTCCAAGTAAGTAAACGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp GAACGAGCCACCATGGACCACACCAACTACCTTTTTAAAAGACAAAGACTCATAAGTTTGTGTCTTGCATaGACATCTGCACCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: ERATMDHTNYLFKRQRLISLCLA*TSAPSD
Trigger: ATCAGAAGGTGCAGATGTCAATGCAAGACACAAACT...TATGAGTCTTTGTCTTTTAAAAAGGTAGTTGGTGTGGTCCATGGTGGCTCGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS-3UTR CAA 90 bp CTGAGCTTTTATTTAGTCAGTCACCAAGTTAAGCTTTTACAACTGCCTTTGGGTCCCTTTTTGGCATCTTaGTGCATATACTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LSFYLVSHQVKLLQLPLGPFLAS*CIYFAV
Trigger: GACAGCAAAGTATATGCACAAAGATGCCAAAAAGGG...ACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGACTAAATAAAAGCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS TCA 72 bp CAGCTCTCAACCGCTGCGGCTCCCCGCGGTCTCCGGTaGCAACGCCACGGCCGTAAGCACCTCCCCGGCTTT +
Preference number: 6 (lower is better)
Translates to: QLSTAAAPRGLR*QRHGRKHLPGF
Trigger: AAAGCCGGGGAGGTGCTTACGGCCGTGGCGTTGTCACCGGAGACCGCGGGGAGCCGCAGCGGTTGAGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS GCA 72 bp GCACTCTCCTGGCCAATGATGTGCTCCTTCAGTCGCTaGTCCAGTGGGAAGCGGCGCCGCTCCTCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: ALSWPMMCSFSR*SSGKRRRSSAS
Trigger: GGAGGCAGAGGAGCGGCGCCGCTTCCCACTGGAGCAGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 72 bp AGCGCCATGGCCAAGGCCCACATGCCCAGACCCGTCTaGTTGGGGACCCCATTCCAGCTGTCTTGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: SAMAKAHMPRPV*LGTPFQLSCPG
Trigger: CCCGGGACAAGACAGCTGGAATGGGGTCCCCAACAAGACGGGTCTGGGCATGTGGGCCTTGGCCATGGCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS GCA 72 bp AGCACTGAACCACCAGCGCCATGGCCAAGGCCCACATaGCCAGACCCGTCTTGTTGGGGACCCCATTCCAGC +
Preference number: 6 (lower is better)
Translates to: STEPPAPWPRPT*PDPSCWGPHSS
Trigger: GCTGGAATGGGGTCCCCAACAAGACGGGTCTGGGCATGTGGGCCTTGGCCATGGCGCTGGTGGTTCAGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS CCA 72 bp CCATGGCCAAGGCCCACATGCCCAGACCCGTCTTGTTaGGGACCCCATTCCAGCTGTCTTGTCCCGGGAGTG +
Preference number: 6 (lower is better)
Translates to: PWPRPTCPDPSC*GPHSSCLVPGV
Trigger: CACTCCCGGGACAAGACAGCTGGAATGGGGTCCCCAACAAGACGGGTCTGGGCATGTGGGCCTTGGCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS CAA 72 bp GCCATGGCCAAGGCCCACATGCCCAGACCCGTCTTGTaGGGGACCCCATTCCAGCTGTCTTGTCCCGGGAGT +
Preference number: 6 (lower is better)
Translates to: AMAKAHMPRPVL*GTPFQLSCPGS
Trigger: ACTCCCGGGACAAGACAGCTGGAATGGGGTCCCCAACAAGACGGGTCTGGGCATGTGGGCCTTGGCCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS CAA 90 bp ACCACCAGCGCCATGGCCAAGGCCCACATGCCCAGACCCGTCTTGTaGGGGACCCCATTCCAGCTGTCTTGTCCCGGGAGTGTTTCTTCG +
Preference number: 6 (lower is better)
Translates to: TTSAMAKAHMPRPVL*GTPFQLSCPGSVSS
Trigger: CGAAGAAACACTCCCGGGACAAGACAGCTGGAATGGGGTCCCCAACAAGACGGGTCTGGGCATGTGGGCCTTGGCCATGGCGCTGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000123870.8
ENSMUST00000209579.2
CDS TCA 72 bp CAGCACCGACGGTGGCGATGGCACTCTCCTGGCCAATaGTGTGCTCCTTCAGTCGCTGCTCCAGTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: QHRRWRWHSPGQ*CAPSVAAPVGS
Trigger: GCTTCCCACTGGAGCAGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGCCACCGTCGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp CGGATCGCAGCACCGACGGTGGCGATGGCACTCTCCTaGCCAATGATGTGCTCCTTCAGTCGCTGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: RIAAPTVAMALS*PMMCSFSRCSS
Trigger: ACTGGAGCAGCGACTGAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGCCACCGTCGGTGCTGCGATCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 90 bp TTCTCAGCCTGGGGTGAGGGCAGCTCAGGGCTCTTGAGGAGGTGCTaGTCCGAATCCTCCACAGTGATACGCAGGGTGCAACCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: FSAWGEGSSGLLRRC*SESSTVIRRVQPPG
Trigger: ACCAGGGGGTTGCACCCTGCGTATCACTGTGGAGGATTCGGACAAGCACCTCCTCAAGAGCCCTGAGCTGCCCTCACCCCAGGCTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp CGGTGGGTGGTGGGCTTCTCAGGGTGGAGTGGTGCCTaGATGTCCAGTTTGCGGGTCTTGCTGTCCTTATCA +
Preference number: 6 (lower is better)
Translates to: RWVVGFSGWSGA*MSSLRVLLSLS
Trigger: TGATAAGGACAGCAAGACCCGCAAACTGGACATCCAGGCACCACTCCACCCTGAGAAGCCCACCACCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS CAA 72 bp TGGGGTGAGGGCAGCTCAGGGCTCTTGAGGAGGTGCTaGTCCGAATCCTCCACAGTGATACGCAGGGTGCAA +
Preference number: 6 (lower is better)
Translates to: WGEGSSGLLRRC*SESSTVIRRVQ
Trigger: TTGCACCCTGCGTATCACTGTGGAGGATTCGGACAAGCACCTCCTCAAGAGCCCTGAGCTGCCCTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS TCA 72 bp CCAACACATCTGCCACCTCGCGGTCCCACAGTAGTGTaGTGTTGTGCCTCTGCTTGGCTCTCTTGGCCCAGA +
Preference number: 6 (lower is better)
Translates to: PTHLPPRGPTVV*CCASAWLSWPR
Trigger: TCTGGGCCAAGAGAGCCAAGCAGAGGCACAACATCACACTACTGTGGGACCGCGAGGTGGCAGATGTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp CAGCTGGCCACCCTCTTCATGGCCGATGTAGCCTGGTaGAGAACCGATAAACTTGGCTACCTCATGTCGCTC +
Preference number: 6 (lower is better)
Translates to: QLATLFMADVAW*RTDKLGYLMSL
Trigger: GAGCGACATGAGGTAGCCAAGTTTATCGGTTCTCCACCAGGCTACATCGGCCATGAAGAGGGTGGCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp GGTCAGCTGGCCACCCTCTTCATGGCCGATGTAGCCTaGTGGAGAACCGATAAACTTGGCTACCTCATGTCG +
Preference number: 6 (lower is better)
Translates to: GQLATLFMADVA*WRTDKLGYLMS
Trigger: CGACATGAGGTAGCCAAGTTTATCGGTTCTCCACCAGGCTACATCGGCCATGAAGAGGGTGGCCAGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 72 bp ATTCCAGACGATCCCAAGAAGAGGAAGACTAGAGGGTaGTCCTCATCGTACCAGCCGTTCTCCTTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: IPDDPKKRKTRG*SSSYQPFSFLR
Trigger: CCGGAGGAAGGAGAACGGCTGGTACGATGAGGAGCACCCTCTAGTCTTCCTCTTCTTGGGATCGTCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 72 bp CTAGATGGTGTAGCACACCTTCTCAGGGTGGAGTGGTaGCTGGATGTCCAGTTTGCGGGTCTTGCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: LDGVAHLLRVEW*LDVQFAGLAVL
Trigger: AAGGACAGCAAGACCCGCAAACTGGACATCCAGGCACCACTCCACCCTGAGAAGGTGTGCTACACCATCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS GCA 72 bp GACCCAGATAAGCTCCAGCCTTGTTGGATGGATTCTTaGTGTAGCACTGAACCACCAGCGCCATGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: DPDKLQPCWMDS*CSTEPPAPWPR
Trigger: CCTTGGCCATGGCGCTGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACAAGGCTGGAGCTTATCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS CCA 72 bp CCTAGCCACCTCCTGAACTCCAGGGCACTTGTCCACTaGTTTGTCATTCGCCAGCTTGCACAGTCTTGTCTC +
Preference number: 6 (lower is better)
Translates to: PSHLLNSRALVH*FVIRQLAQSCL
Trigger: GAGACAAGACTGTGCAAGCTGGCGAATGACAAACCAGTGGACAAGTGCCCTGGAGTTCAGGAGGTGGCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS CAA 90 bp TGGGTGGTGGGCTTCTCAGGGTGGAGTGGTGCCTGGATGTCCAGTTaGCGGGTCTTGCTGTCCTTATCAATGATCTCCAGTCGCAATGTA +
Preference number: 6 (lower is better)
Translates to: WVVGFSGWSGAWMSS*RVLLSLSMISSRNV
Trigger: TACATTGCGACTGGAGATCATTGATAAGGACAGCAAGACCCGCAAACTGGACATCCAGGCACCACTCCACCCTGAGAAGCCCACCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS TCA 72 bp GGACTCCCTGTTCATTGGCAGTCTTGTAGACACTGCTaGACTCATCCCCAAGGTTTGGGTCAGCTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: GLPVHWQSCRHC*THPQGLGQLQQ
Trigger: CTGCTGGAGCTGACCCAAACCTTGGGGATGAGTTCAGCAGTGTCTACAAGACTGCCAATGAACAGGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 72 bp TGCTTGGCTCTCTTGGCCCAGAAGTTCAGTTCCTTGTaGACCAGCTGGATGAGCTCTGAGTGGCAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: CLALLAQKFSSL*TSWMSSEWQKG
Trigger: CCCTTTCTGCCACTCAGAGCTCATCCAGCTGGTCAACAAGGAACTGAACTTCTGGGCCAAGAGAGCCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 72 bp GGCTTCTCAGGGTGGAGTGGTGCCTGGATGTCCAGTTaGCGGGTCTTGCTGTCCTTATCAATGATCTCCAGT +
Preference number: 6 (lower is better)
Translates to: GFSGWSGAWMSS*RVLLSLSMISS
Trigger: ACTGGAGATCATTGATAAGGACAGCAAGACCCGCAAACTGGACATCCAGGCACCACTCCACCCTGAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209579.2
CDS TCA 72 bp CGATTCGATTTCGGCTCATCTCCAAAGCTTCCTGTCTaGGCTGCAATGCATGCTGGGCGATCTCATCACTGG +
Preference number: 6 (lower is better)
Translates to: RFDFGSSPKLPV*AAMHAGRSHHW
Trigger: CCAGTGATGAGATCGCCCAGCATGCATTGCAGCTCAGACAGGAAGCTTTGGAGATGAGCCGAAATCGAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS TCA 72 bp CTGAGTGGCAGAAAGGGAGGAAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCGTCTCTCCGGAAGTGAG +
Preference number: 6 (lower is better)
Translates to: LSGRKGGSRRSH*SVPETRLSGSE
Trigger: CTCACTTCCGGAGAGACGAGTTTCTGGGACGGATCAATGAGATCGTCTACTTCCTCCCTTTCTGCCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 72 bp CTTCCATTAGAGCTGCATCCTTGTTGGATGGATTCTTaGTGTAGCACTGAACCACCAGCGCCATGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: LPLELHPCWMDS*CSTEPPAPWPR
Trigger: CCTTGGCCATGGCGCTGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACAAGGATGCAGCTCTAATGGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 72 bp CGATTTCGGCTCATCTCCAAAGCTTCCTGTCTGAGCTaGAATGCATGCTGGGCGATCTCATCACTGGCTACA +
Preference number: 6 (lower is better)
Translates to: RFRLISKASCLS*NACWAISSLAT
Trigger: TGTAGCCAGTGATGAGATCGCCCAGCATGCATTGCAGCTCAGACAGGAAGCTTTGGAGATGAGCCGAAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 72 bp CAGGGCACTTGTCCACTGGTTTGTCATTCGCCAGCTTaGACAGTCTTGTCTCCCATCTTCCAGAGAATGGAC +
Preference number: 6 (lower is better)
Translates to: QGTCPLVCHSPA*TVLSPIFQRMD
Trigger: GTCCATTCTCTGGAAGATGGGAGACAAGACTGTGCAAGCTGGCGAATGACAAACCAGTGGACAAGTGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS CCA 72 bp GGAGAACCGATAAACTTGGCTACCTCATGTCGCTCCTaGAACTCAGACATGTCGAGCCGGATGAAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: GEPINLATSCRS*NSDMSSRMKPF
Trigger: AAAGGGCTTCATCCGGCTCGACATGTCTGAGTTCCAGGAGCGACATGAGGTAGCCAAGTTTATCGGTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp AGAGGACTACTGCATTTGGGCACTGTTTCAGTTTCTTaGTCAGCTGGCCACCCTCTTCATGGCCGATGTAGC +
Preference number: 6 (lower is better)
Translates to: RGLLHLGTVSVS*SAGHPLHGRCS
Trigger: GCTACATCGGCCATGAAGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp GGCCTTGTCCACCTCATCAAAGAGGACTACTGCATTTaGGCACTGTTTCAGTTTCTTGGTCAGCTGGCCACC +
Preference number: 6 (lower is better)
Translates to: GLVHLIKEDYCI*ALFQFLGQLAT
Trigger: GGTGGCCAGCTGACCAAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTCTTTGATGAGGTGGACAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 72 bp GGGCCTTGTCCACCTCATCAAAGAGGACTACTGCATTaGGGCACTGTTTCAGTTTCTTGGTCAGCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: GPCPPHQRGLLH*GTVSVSWSAGH
Trigger: GTGGCCAGCTGACCAAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTCTTTGATGAGGTGGACAAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 72 bp ACCTTCTCAGGGTGGAGTGGTGCCTGGATGTCCAGTTaGCGGGTCTTGCTGTCCTTATCAATGATCTCCAGT +
Preference number: 6 (lower is better)
Translates to: TFSGWSGAWMSS*RVLLSLSMISS
Trigger: ACTGGAGATCATTGATAAGGACAGCAAGACCCGCAAACTGGACATCCAGGCACCACTCCACCCTGAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
CDS CAA 72 bp CCAGGGCACTTGTCCACTGGTTTGTCATTCGCCAGCTaGCACAGTCTTGTCTCCCATCTTCCAGAGAATGGA +
Preference number: 6 (lower is better)
Translates to: PGHLSTGLSFAS*HSLVSHLPENG
Trigger: TCCATTCTCTGGAAGATGGGAGACAAGACTGTGCAAGCTGGCGAATGACAAACCAGTGGACAAGTGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS CAA 90 bp CAGGGCACTTGTCCACTGGTTTGTCATTCGCCAGCTTGCACAGTCTaGTCTCCCATCTTCCAGAGAATGGACTCCCTGTTCATTGGCAGT +
Preference number: 6 (lower is better)
Translates to: QGTCPLVCHSPACTV*SPIFQRMDSLFIGS
Trigger: ACTGCCAATGAACAGGGAGTCCATTCTCTGGAAGATGGGAGACAAGACTGTGCAAGCTGGCGAATGACAAACCAGTGGACAAGTGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106998.8
CDS CAA 90 bp CATCTGGATGGGCCTTGTCCACCTCATCAAAGAGGACTACTGCATTaGGGCACTGTTTCAGTTTCTTGGTCAGCTGGCCACCCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: HLDGPCPPHQRGLLH*GTVSVSWSAGHPLH
Trigger: ATGAAGAGGGTGGCCAGCTGACCAAGAAACTGAAACAGTGCCCAAATGCAGTAGTCCTCTTTGATGAGGTGGACAAGGCCCATCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp TCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATaGGCCTTGTCCACCTCATCAAAGAGGACTACTGCA +
Preference number: 6 (lower is better)
Translates to: SNSCSMMVSTSG*ALSTSSKRTTA
Trigger: TGCAGTAGTCCTCTTTGATGAGGTGGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp CTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTaGATGGGCCTTGTCCACCTCATCAAAGAGGACTAC +
Preference number: 6 (lower is better)
Translates to: LIKQLQHDGEHI*MGLVHLIKEDY
Trigger: GTAGTCCTCTTTGATGAGGTGGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 90 bp TCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTaGTCCACCTCATCAAAGAGGACTACTGCATTTGGGCACTGTTTC +
Preference number: 6 (lower is better)
Translates to: SSNSCSMMVSTSGWA*STSSKRTTAFGHCF
Trigger: GAAACAGTGCCCAAATGCAGTAGTCCTCTTTGATGAGGTGGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 90 bp ATCTCATCACTGGCTACATTGGAAGTCATGATGAAGATGGCATCCTaGCAGTCAATGGTCTTCCCTTTGCCATCTGTCAGGCGGCCCTCA +
Preference number: 6 (lower is better)
Translates to: ISSLATLEVMMKMAS*QSMVFPLPSVRRPS
Trigger: TGAGGGCCGCCTGACAGATGGCAAAGGGAAGACCATTGACTGCAAGGATGCCATCTTCATCATGACTTCCAATGTAGCCAGTGATGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 90 bp TGTCTGAGCTGCAATGCATGCTGGGCGATCTCATCACTGGCTACATaGGAAGTCATGATGAAGATGGCATCCTTGCAGTCAATGGTCTTC +
Preference number: 6 (lower is better)
Translates to: CLSCNACWAISSLAT*EVMMKMASLQSMVF
Trigger: GAAGACCATTGACTGCAAGGATGCCATCTTCATCATGACTTCCAATGTAGCCAGTGATGAGATCGCCCAGCATGCATTGCAGCTCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CCA 72 bp TTTAATTGGACCCAGATAAGCTCCAGCCTTGTTGGATaGATTCTTGCTGTAGCACTGAACCACCAGCGCCAT +
Preference number: 6 (lower is better)
Translates to: FNWTQISSSLVG*ILAVALNHQRH
Trigger: ATGGCGCTGGTGGTTCAGTGCTACAGCAAGAATCCATCCAACAAGGCTGGAGCTTATCTGGGTCCAATTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123870.8
CDS CAA 72 bp CTGGCTACATTGGAAGTCATGATGAAGATGGCATCCTaGCAGTCAATGGTCTTCCCTTTGCCATCTGTCAGG +
Preference number: 6 (lower is better)
Translates to: LATLEVMMKMAS*QSMVFPLPSVR
Trigger: CCTGACAGATGGCAAAGGGAAGACCATTGACTGCAAGGATGCCATCTTCATCATGACTTCCAATGTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS CAA 72 bp TGCAATGCATGCTGGGCGATCTCATCACTGGCTACATaGGAAGTCATGATGAAGATGGCATCCTTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: CNACWAISSLAT*EVMMKMASLQS
Trigger: TGACTGCAAGGATGCCATCTTCATCATGACTTCCAATGTAGCCAGTGATGAGATCGCCCAGCATGCATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS TCA 72 bp TCATTGATCCGTCCCAGAAACTCGTCTCTCCGGAAGTaGGCTTTCAAGATGGGTCGGATCACATTCTCTTTA +
Preference number: 6 (lower is better)
Translates to: SLIRPRNSSLRK*AFKMGRITFSL
Trigger: TAAAGAGAATGTGATCCGACCCATCTTGAAAGCTCACTTCCGGAGAGACGAGTTTCTGGGACGGATCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2
CDS GCA 72 bp GATGAAGCCCTTTTTGGCATCTTTGTGCATATACTTTaGTGTCTGCTTGGCCAGCTCGGTTTTCCCTATTCC +
Preference number: 6 (lower is better)
Translates to: DEALFGIFVHIL*CLLGQLGFPYS
Trigger: GGAATAGGGAAAACCGAGCTGGCCAAGCAGACAGCAAAGTATATGCACAAAGATGCCAAAAAGGGCTTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000001884.14
ENSMUST00000106998.8
ENSMUST00000209579.2