Pregenerated sensors for CLNK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039315Ensembl transcript IDs: ENSMUST00000169819.5, ENSMUST00000171633.5
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGCAGCTTGGCATCTCTaGGCAGGACAGTGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLAAWHL*AGQCCM Trigger: CATGCAGCACTGTCCTGCTCAGAGATGCCAAGCTGC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTTCTTTTGCACTCCTCTaGCTGGGCCCCCTCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLSFALL*LGPLWT Trigger: AGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAAAAGA...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTAGCATTCGAGGGCTGTaGCTGGCTGCAGCTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLSIRGL*LAAAWH Trigger: ATGCCAAGCTGCAGCCAGCCACAGCCCTCGAATGCT...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR TCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTCCCAGGGCAAACTGTTaGTTGCTCTCGAGGAAACGG | + |
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Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLPRANC*LLSRKR Trigger: CCGTTTCCTCGAGAGCAATCAACAGTTTGCCCTGGG...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR TCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGGCTTTGTCTGGTGGTaGGATTTGTGCTCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLGFVWW*DLCSLL Trigger: CAGCAGGGAGCACAAATCTCACCACCAGACAAAGCC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTCAGGACAGTGCTGCATaGTACCTGTATGGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLQDSAA*YLYGLW Trigger: CCAGAGACCATACAGGTAGCATGCAGCACTGTCCTG...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGCATTTTTCTCCACCTaGGACCCCAGCCAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLAFFST*DPSQVP Trigger: AGGAACTTGGCTGGGGTCCCAGGTGGAGAAAAATGC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGCATGTAGGAAGAGCTaGCAATGGCAGGTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLACRKS*QWQVDS Trigger: AGAGTCCACCTGCCATTGCCAGCTCTTCCTACATGC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR TCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGCTGAGGCTTGGCCATaGCCTATTTTTCAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLAEAWP*PIFQQR Trigger: TCTCTGCTGAAAAATAGGTCATGGCCAAGCCTCAGC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGGACTTCTGGAAAGGTaGGCTTTGGAGCGAAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLGLLER*ALERSM Trigger: CATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACAGGGCTGTGGCTGGCTaGAGCTTGGCATCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHRAVAG*SLASLS Trigger: GCTCAGAGATGCCAAGCTGCAGCCAGCCACAGCCCT...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACTTGCACTCCTCTGCCTaGGCCCCCTCTGGACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHLHSSA*APSGLL Trigger: CAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAA...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTACATCTTCCACTGCCTaGCGACTGTATTCTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLTSSTA*RLYSPM Trigger: CATTGGAGAATACAGTCGCCAGGCAGTGGAAGATGT...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR TCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACGCCCTTTGGCACTGCTaGGGCTTGGCCATGACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHALWHC*GLAMTY Trigger: ATAGGTCATGGCCAAGCCTCAGCAGTGCCAAAGGGC...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACCCTACTGAAGTCTTTTaGACTCCTCTGCCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHPTEVF*TPLPGP Trigger: GGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGTAGG...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACGCATTTTTCTCCACCTaGGACCCCAGCCAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHAFFST*DPSQVP Trigger: AGGAACTTGGCTGGGGTCCCAGGTGGAGAAAAATGC...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACTGGAGACAGAAGCCTTaGGAGGTAACAGAAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHWRQKP*EVTEGE Trigger: CTCCCCTTCTGTTACCTCCCAAGGCTTCTGTCTCCA...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACGCATGTAGGAAGAGCTaGCAATGGCAGGTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHACRKS*QWQVDS Trigger: AGAGTCCACCTGCCATTGCCAGCTCTTCCTACATGC...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR TCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACGCTGAGGCTTGGCCATaGCCTATTTTTCAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHAEAWP*PIFQQR Trigger: TCTCTGCTGAAAAATAGGTCATGGCCAAGCCTCAGC...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTCAAAACATATGGTTCTaGCTTGGATTTTGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRPRPLMRGYLAGLQNIWF*LGFCRA Trigger: TGCTCTACAAAATCCAAGGCAGAACCATATGTTTTG...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACTGGTTTGTCTCTCAGTaGAGACAGAAGCCTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHWFVSQ*RQKPWE Trigger: CTCCCAAGGCTTCTGTCTCCACTGAGAGACAAACCA...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR TCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCGAGGCAGTGGCTGGGTaGGGTAGCACTGTTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGEAVAG*GSTVSC Trigger: GCAGGAAACAGTGCTACCTCACCCAGCCACTGCCTC...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACTCATCCTCACATCCCTaGTTTGTCTCTCAGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHSSSHP*FVSQWR Trigger: TCTCCACTGAGAGACAAACCAGGGATGTGAGGATGA...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCTTGCACTCCTCTGCCTaGGCCCCCTCTGGACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGLHSSA*APSGLL Trigger: CAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAA...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACTGGGCAAGAAGATTCTaGCTTTGTCTGGTGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHWARRF*LCLVVR Trigger: TCTCACCACCAGACAAAGCCAGAATCTTCTTGCCCA...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACACATCTTCCACTGCCTaGCGACTGTATTCTCCAATG | + |
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Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHTSSTA*RLYSPM Trigger: CATTGGAGAATACAGTCGCCAGGCAGTGGAAGATGT...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR TCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCGCCCTTTGGCACTGCTaGGGCTTGGCCATGACCTAT | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGALWHC*GLAMTY Trigger: ATAGGTCATGGCCAAGCCTCAGCAGTGCCAAAGGGC...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAAGGGCTGTGGCTGGCTaGAGCTTGGCATCTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQRAVAG*SLASLS Trigger: GCTCAGAGATGCCAAGCTGCAGCCAGCCACAGCCCT...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACTGCATGCTACCTGTATaGTCTCTGGCTTGTATACTG | + |
|
Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHCMLPV*SLACIL Trigger: CAGTATACAAGCCAGAGACCATACAGGTAGCATGCA...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCTTCGAGGGCTGTGGCTaGCTGCAGCTTGGCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGFEGCG*LQLGIS Trigger: AGAGATGCCAAGCTGCAGCCAGCCACAGCCCTCGAA...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATCTTTTGCACTCCTCTaGCTGGGCCCCCTCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQSFALL*LGPLWT Trigger: AGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAAAAGA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCTACTGAAGTCTTTTaGACTCCTCTGCCTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGPTEVF*TPLPGP Trigger: GGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGTAGG...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATTCGAGGGCTGTGGCTaGCTGCAGCTTGGCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQFEGCG*LQLGIS Trigger: AGAGATGCCAAGCTGCAGCCAGCCACAGCCCTCGAA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAAGCATTCGAGGGCTGTaGCTGGCTGCAGCTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQSIRGL*LAAAWH Trigger: ATGCCAAGCTGCAGCCAGCCACAGCCCTCGAATGCT...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR TCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAACCCAGGGCAAACTGTTaGTTGCTCTCGAGGAAACGG | + |
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Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQPRANC*LLSRKR Trigger: CCGTTTCCTCGAGAGCAATCAACAGTTTGCCCTGGG...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCAGGACAGTGCTGCATaGTACCTGTATGGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGQDSAA*YLYGLW Trigger: CCAGAGACCATACAGGTAGCATGCAGCACTGTCCTG...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCAGGAAGAGCTGGCAATaGCAGGTGGACTCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGRKSWQ*QVDSSV Trigger: CACAGAAGAGTCCACCTGCCATTGCCAGCTCTTCCT...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACCACCACCAAAACATATaGTTCTGCCTTGGATTTTGT | + |
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Preference number: 4 (lower is better) Translates to: DGRRTESIEPGMRQGPGHHHQNI*FCLGFC Trigger: ACAAAATCCAAGGCAGAACCATATGTTTTGGTGGTG...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATGGAGACAGAAGCCTTaGGAGGTAACAGAAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQWRQKP*EVTEGE Trigger: CTCCCCTTCTGTTACCTCCCAAGGCTTCTGTCTCCA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCGGACTTCTGGAAAGGTaGGCTTTGGAGCGAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGGLLER*ALERSM Trigger: CATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCC...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCGCTGGCAATGGCAGGTaGACTCTTCTGTGTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGAGNGR*TLLCVL Trigger: CAAAACACACAGAAGAGTCCACCTGCCATTGCCAGC...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAAGGAAGAGCTGGCAATaGCAGGTGGACTCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQRKSWQ*QVDSSV Trigger: CACAGAAGAGTCCACCTGCCATTGCCAGCTCTTCCT...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCTCTCATCAGGCTTTGTaGGGTCAGGTTTCTCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGSHQAL*GQVSPS Trigger: ACTCGGAGAAACCTGACCCCACAAAGCCTGATGAGA...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR GCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATTCCTCGTAGTCCTGTaGCCAGGGCAAACTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQFLVVL*PGQTVD Trigger: ATCAACAGTTTGCCCTGGGCACAGGACTACGAGGAA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCTATACTGTGCTTTCCTaGCATGTAGGAAGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGYTVLS*HVGRAG Trigger: GCCAGCTCTTCCTACATGCCAGGAAAGCACAGTATA...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATCTCATCAGGCTTTGTaGGGTCAGGTTTCTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQSHQAL*GQVSPS Trigger: ACTCGGAGAAACCTGACCCCACAAAGCCTGATGAGA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR GCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCGTGAGATTCTTCTTCTaGTCCAAGGACCCTACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGVRFFF*SKDPTE Trigger: TTCAGTAGGGTCCTTGGAGCAGAAGAAGAATCTCAC...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169819.5 |
||
| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATCATCCTCACATCCCTaGTTTGTCTCTCAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQSSSHP*FVSQWR Trigger: TCTCCACTGAGAGACAAACCAGGGATGTGAGGATGA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATGGGCAAGAAGATTCTaGCTTTGTCTGGTGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQWARRF*LCLVVR Trigger: TCTCACCACCAGACAAAGCCAGAATCTTCTTGCCCA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATGCATGCTACCTGTATaGTCTCTGGCTTGTATACTG | + |
|
Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQCMLPV*SLACIL Trigger: CAGTATACAAGCCAGAGACCATACAGGTAGCATGCA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCTCTTCTGTGTGTTTTaGTTTGATGATGGGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGLFCVF*FDDGQE Trigger: TTCTTGCCCATCATCAAACCAAAACACACAGAAGAG...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR GCA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCAAAACATATGGTTCTaGCTTGGATTTTGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: INADGRRTESIEPGMRQGQNIWF*LGFCRA Trigger: TGCTCTACAAAATCCAAGGCAGAACCATATGTTTTG...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CCA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAACTCTTCTGTGTGTTTTaGTTTGATGATGGGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EINADGRRTESIEPGMRQLFCVF*FDDGQE Trigger: TTCTTGCCCATCATCAAACCAAAACACACAGAAGAG...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGTGGCTGGCTGCAGCTaGGCATCTCTGAGCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLVAGCS*ASLSRT Trigger: TGTCCTGCTCAGAGATGCCAAGCTGCAGCCAGCCAC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | TTCTCCACCTGGGACCCCAGCCAAGTTCCTTCTGTGATCCGGAAGTaGTTCCAGAACCGCTCGACACCGCCCTTTGGCACTGCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTWDPSQVPSVIRK*FQNRSTPPFGTAEA Trigger: AGCCTCAGCAGTGCCAAAGGGCGGTGTCGAGCGGTTCTGGAACCACTTCCGGATCACAGAAGGAACTTGGCTGGGGTCCCAGGTGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | CTTTTGCACTCCTCTGCCTGGGCCCCCTCTGGACTTCTGGAAAGGTaGGCTTTGGAGCGAAGTATGCACTGCTCTCCTCTGGTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLHSSAWAPSGLLER*ALERSMHCSPLVVL Trigger: CAGCACCACCAGAGGAGAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | TGCCTGGCTGGAGTACTGAGTGAGAAGGAGCCTGGCGAGAGGCAGTaGCTGGGTGAGGTAGCACTGTTTCCTGCGTGCAGCCTTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLAGVLSEKEPGERQ*LGEVALFPACSLVF Trigger: AAAGACAAGGCTGCACGCAGGAAACAGTGCTACCTCACCCAGCCACTGCCTCTCGCCAGGCTCCTTCTCACTCAGTACTCCAGCCAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGTGGAGACAGAAGCCTaGGGAGGTAACAGAAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLVETEA*GGNRRG Trigger: TCCCCTTCTGTTACCTCCCAAGGCTTCTGTCTCCAC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTCTGGAAAGGTGGGCTTaGGAGCGAAGTATGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLLERWA*ERSMHC Trigger: GCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAG...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTCCTTCTCATCAGGCTTaGTGGGGTCAGGTTTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLPSHQA*WGQVSP Trigger: CGGAGAAACCTGACCCCACAAAGCCTGATGAGAAGG...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGCCCAGGGCAAACTGTaGATTGCTCTCGAGGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLAQGKL*IALEET Trigger: CGTTTCCTCGAGAGCAATCAACAGTTTGCCCTGGGC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS TCA 90 bp | CTGTTGCATTTTTCTCCACCTGGGACCCCAGCCAAGTTCCTTCTGTaGTCCGGAAGTGGTTCCAGAACCGCTCGACACCGCCCTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLHFSPPGTPAKFLL*SGSGSRTARHRPLA Trigger: TGCCAAAGGGCGGTGTCGAGCGGTTCTGGAACCACTTCCGGATCACAGAAGGAACTTGGCTGGGGTCCCAGGTGGAGAAAAATGCAACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | ACTGAAGTCTTTTGCACTCCTCTGCCTGGGCCCCCTCTGGACTTCTaGAAAGGTGGGCTTTGGAGCGAAGTATGCACTGCTCTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TEVFCTPLPGPPLDF*KGGLWSEVCTALLW Trigger: CCAGAGGAGAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | AGGACCCTACTGAAGTCTTTTGCACTCCTCTGCCTGGGCCCCCTCTaGACTTCTGGAAAGGTGGGCTTTGGAGCGAAGTATGCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTLLKSFALLCLGPL*TSGKVGFGAKYALL Trigger: GAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGTAGGGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169819.5 |
||
| CDS GCA 90 bp | CGAGTTTGTGTTTTCATAGGGCAGCATTCGAGGGCTGTGGCTGGCTaGAGCTTGGCATCTCTGAGCAGGACAGTGCTGCATGCTACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RVCVFIGQHSRAVAG*SLASLSRTVLHATC Trigger: ACAGGTAGCATGCAGCACTGTCCTGCTCAGAGATGCCAAGCTGCAGCCAGCCACAGCCCTCGAATGCTGCCCTATGAAAACACAAACTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS GCA 90 bp | GTGGTGAGATTTGTGCTCCCTGCTGTTTACCCTACTGAAGTCTTTTaGACTCCTCTGCCTGGGCCCCCTCTGGACTTCTGGAAAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVRFVLPAVYPTEVF*TPLPGPPLDFWKGG Trigger: CCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGTAGGGTAAACAGCAGGGAGCACAAATCTCACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | TCTCCGAGTTTGTGTTTTCATAGGGCAGCATTCGAGGGCTGTGGCTaGCTGCAGCTTGGCATCTCTGAGCAGGACAGTGCTGCATGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SPSLCFHRAAFEGCG*LQLGISEQDSAACY Trigger: GTAGCATGCAGCACTGTCCTGCTCAGAGATGCCAAGCTGCAGCCAGCCACAGCCCTCGAATGCTGCCCTATGAAAACACAAACTCGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTCGAATCCTTCTTTCGTaGTCCTTTTATTGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLRILLS*SFYCPG Trigger: GCCAGGGCAATAAAAGGACAACGAAAGAAGGATTCG...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTTCCTTGAAGGTAGGCTaGTCCACTTCTTCCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLSLKVG*STSSRC Trigger: ACATCTGGAAGAAGTGGACAAGCCTACCTTCAAGGA...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACGTGGCTGGCTGCAGCTaGGCATCTCTGAGCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHVAGCS*ASLSRT Trigger: TGTCCTGCTCAGAGATGCCAAGCTGCAGCCAGCCAC...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS TCA 90 bp | GCTTTGTCTGGTGGTGAGATTCTTCTTCTGCTCCAAGGACCCTACTaGAGTCTTTTGCACTCCTCTGCCTGGGCCCCCTCTGGACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALSGGEILLLLQGPY*SLLHSSAWAPSGLL Trigger: CAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGTAGGGTCCTTGGAGCAGAAGAAGAATCTCACCACCAGACAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169819.5 |
||
| CDS GCA 90 bp | TGTGGCTGGCTGCAGCTTGGCATCTCTGAGCAGGACAGTGCTGCATaGTACCTGTATGGTCTCTGGCTTGTATACTGTGCTTTCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGWLQLGISEQDSAA*YLYGLWLVYCAFLA Trigger: TGCCAGGAAAGCACAGTATACAAGCCAGAGACCATACAGGTAGCATGCAGCACTGTCCTGCTCAGAGATGCCAAGCTGCAGCCAGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | TTTACCCTACTGAAGTCTTTTGCACTCCTCTGCCTGGGCCCCCTCTaGACTTCTGGAAAGGTGGGCTTTGGAGCGAAGTATGCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTLLKSFALLCLGPL*TSGKVGFGAKYALL Trigger: GAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGTAGGGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | CTTCTTCCAGATGTGTCATCCTCACATCCCTGGTTTGTCTCTCAGTaGAGACAGAAGCCTTGGGAGGTAACAGAAGGGGAGCCTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LLPDVSSSHPWFVSQ*RQKPWEVTEGEPPS Trigger: CGATGGAGGCTCCCCTTCTGTTACCTCCCAAGGCTTCTGTCTCCACTGAGAGACAAACCAGGGATGTGAGGATGACACATCTGGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTCTGGTAAAATTTTCATaGATGGCCATGCCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLLVKFS*MAMPSA Trigger: TGCTGAAGGCATGGCCATCAATGAAAATTTTACCAG...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACCTGGAAAGGTGGGCTTaGGAGCGAAGTATGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHLERWA*ERSMHC Trigger: GCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAG...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTAAGAAGATTCTGGCTTaGTCTGGTGGTGAGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLKKILA*SGGEIL Trigger: AAGAATCTCACCACCAGACAAAGCCAGAATCTTCTT...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169819.5 |
||
| CDS CCA 90 bp | GGCATCTCTGAGCAGGACAGTGCTGCATGCTACCTGTATGGTCTCTaGCTTGTATACTGTGCTTTCCTGGCATGTAGGAAGAGCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GISEQDSAACYLYGL*LVYCAFLACRKSWQ Trigger: TTGCCAGCTCTTCCTACATGCCAGGAAAGCACAGTATACAAGCCAGAGACCATACAGGTAGCATGCAGCACTGTCCTGCTCAGAGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACCCTCACATCCCTGGTTaGTCTCTCAGTGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHPHIPG*SLSGDR Trigger: TCTGTCTCCACTGAGAGACAAACCAGGGATGTGAGG...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACAAGGGTTGGTACTTCTaGGGGAGAGTGATAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHKGWYF*GRVIAG Trigger: GCCTGCTATCACTCTCCCCAAGAAGTACCAACCCTT...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTTCTGTGTGTTTTGGTTaGATGATGGGCAAGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLSVCFG*MMGKKI Trigger: AATCTTCTTGCCCATCATCAAACCAAAACACACAGA...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | CTCAGGATCTTCGTAGTCGTTGTTACTGTTGCATTTTTCTCCACCTaGGACCCCAGCCAAGTTCCTTCTGTGATCCGGAAGTGGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRIFVVVVTVAFFST*DPSQVPSVIRKWFQ Trigger: CTGGAACCACTTCCGGATCACAGAAGGAACTTGGCTGGGGTCCCAGGTGGAGAAAAATGCAACAGTAACAACGACTACGAAGATCCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | CTGCATGCTACCTGTATGGTCTCTGGCTTGTATACTGTGCTTTCCTaGCATGTAGGAAGAGCTGGCAATGGCAGGTGGACTCTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHATCMVSGLYTVLS*HVGRAGNGRWTLLC Trigger: ACACAGAAGAGTCCACCTGCCATTGCCAGCTCTTCCTACATGCCAGGAAAGCACAGTATACAAGCCAGAGACCATACAGGTAGCATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAATGAGACAAGGCCCAGGCCACTGATGCGGGGATATCTGGCTGGGCTTGGTGGCAAAGGAGTCTaGTTTATTTTTGTGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARNETRPRPLMRGYLAGLGGKGV*FIFVYL Trigger: CAAATACACAAAAATAAACAAGACTCCTTTGCCACC...AAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGGGCCTTGTCTCATTCCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS GCA 90 bp | TCTTCCACTGCCTGGCGACTGTATTCTCCAATGTACCATTCATTCTaGCAGACATCCTTCTCATCAGGCTTTGTGGGGTCAGGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSTAWRLYSPMYHSF*QTSFSSGFVGSGFS Trigger: GGAGAAACCTGACCCCACAAAGCCTGATGAGAAGGATGTCTGGCAGAATGAATGGTACATTGGAGAATACAGTCGCCAGGCAGTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACCGAATCCTTCTTTCGTaGTCCTTTTATTGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHRILLS*SFYCPG Trigger: GCCAGGGCAATAAAAGGACAACGAAAGAAGGATTCG...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACTCCTTGAAGGTAGGCTaGTCCACTTCTTCCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHSLKVG*STSSRC Trigger: ACATCTGGAAGAAGTGGACAAGCCTACCTTCAAGGA...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACTGTATGGTCTCTGGCTaGTATACTGTGCTTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHCMVSG*YTVLSW Trigger: CCAGGAAAGCACAGTATACAAGCCAGAGACCATACA...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | TGGCTTGTATACTGTGCTTTCCTGGCATGTAGGAAGAGCTGGCAATaGCAGGTGGACTCTTCTGTGTGTTTTGGTTTGATGATGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: WLVYCAFLACRKSWQ*QVDSSVCFGLMMGK Trigger: CTTGCCCATCATCAAACCAAAACACACAGAAGAGTCCACCTGCCATTGCCAGCTCTTCCTACATGCCAGGAAAGCACAGTATACAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCTTCTCATCAGGCTTaGTGGGGTCAGGTTTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: INADGRRTESIEPGMRQGPSHQA*WGQVSP Trigger: CGGAGAAACCTGACCCCACAAAGCCTGATGAGAAGG...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACACATATGGTTCTGCCTaGGATTTTGTAGAGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHTYGSA*DFVEQS Trigger: AGACTGCTCTACAAAATCCAAGGCAGAACCATATGT...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 90 bp | CAATGTACCATTCATTCTGCCAGACATCCTTCTCATCAGGCTTTGTaGGGTCAGGTTTCTCCGAGTTTGTGTTTTCATAGGGCAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: QCTIHSARHPSHQAL*GQVSPSLCFHRAAF Trigger: GAATGCTGCCCTATGAAAACACAAACTCGGAGAAACCTGACCCCACAAAGCCTGATGAGAAGGATGTCTGGCAGAATGAATGGTACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCAAGGGTTGGTACTTCTaGGGGAGAGTGATAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: INADGRRTESIEPGMRQGKGWYF*GRVIAG Trigger: GCCTGCTATCACTCTCCCCAAGAAGTACCAACCCTT...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGCCCAGGGCAAACTGTaGATTGCTCTCGAGGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: EINADGRRTESIEPGMRQAQGKL*IALEET Trigger: CGTTTCCTCGAGAGCAATCAACAGTTTGCCCTGGGC...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAACCTCACATCCCTGGTTaGTCTCTCAGTGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: EINADGRRTESIEPGMRQPHIPG*SLSGDR Trigger: TCTGTCTCCACTGAGAGACAAACCAGGGATGTGAGG...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCCAGGCCACGGTGGCAAAGGAGTCTaGTTTATTTTTGTGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGRRTESIEPGMRQGPGHGGKGV*FIFVYL Trigger: CAAATACACAAAAATAAACAAGACTCCTTTGCCACC...GTGGCCTGGGCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS TCA 90 bp | TTTTGGTTTGATGATGGGCAAGAAGATTCTGGCTTTGTCTGGTGGTaGGATTCTTCTTCTGCTCCAAGGACCCTACTGAAGTCTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FWFDDGQEDSGFVWW*DSSSAPRTLLKSFA Trigger: TGCAAAAGACTTCAGTAGGGTCCTTGGAGCAGAAGAAGAATCTCACCACCAGACAAAGCCAGAATCTTCTTGCCCATCATCAAACCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169819.5 |
||
| CDS CCA 90 bp | AAAGTACCATCCTTGTTCTCTTTCATTAACACATCTTCCACTGCCTaGCGACTGTATTCTCCAATGTACCATTCATTCTGCCAGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: KVPSLFSFINTSSTA*RLYSPMYHSFCQTS Trigger: GGATGTCTGGCAGAATGAATGGTACATTGGAGAATACAGTCGCCAGGCAGTGGAAGATGTGTTAATGAAAGAGAACAAGGATGGTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | ATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAGGCCTGGTAAAATTTTCATaGATGGCCATGCCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: INADGRRTESIEPGMRQGLVKFS*MAMPSA Trigger: TGCTGAAGGCATGGCCATCAATGAAAATTTTACCAG...GCCTTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAAACATATGGTTCTGCCTaGGATTTTGTAGAGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EINADGRRTESIEPGMRQTYGSA*DFVEQS Trigger: AGACTGCTCTACAAAATCCAAGGCAGAACCATATGT...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS-3UTR CAA 90 bp | GAGATAAATGCAGATGGAAGAAGAACTGAATCCATTGAGCCAGGAATGAGACAATCTGTGTGTTTTGGTTaGATGATGGGCAAGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: EINADGRRTESIEPGMRQSVCFG*MMGKKI Trigger: AATCTTCTTGCCCATCATCAAACCAAAACACACAGA...TTGTCTCATTCCTGGCTCAATGGATTCAGTTCTTCTTCCATCTGCATTTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CAA 90 bp | CACTCCTCTGCCTGGGCCCCCTCTGGACTTCTGGAAAGGTGGGCTTaGGAGCGAAGTATGCACTGCTCTCCTCTGGTGGTGCTGGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: HSSAWAPSGLLERWA*ERSMHCSPLVVLGV Trigger: TACCCCCAGCACCACCAGAGGAGAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGGCAGAGGAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CCA 72 bp | CCTGGGCCCCCTCTGGACTTCTGGAAAGGTGGGCTTTaGAGCGAAGTATGCACTGCTCTCCTCTGGTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGPPLDFWKGGL*SEVCTALLWWC Trigger: GCACCACCAGAGGAGAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CAA 72 bp | GCCTGGGCCCCCTCTGGACTTCTGGAAAGGTGGGCTTaGGAGCGAAGTATGCACTGCTCTCCTCTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AWAPSGLLERWA*ERSMHCSPLVV Trigger: CACCACCAGAGGAGAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 72 bp | TGGGACCCCAGCCAAGTTCCTTCTGTGATCCGGAAGTaGTTCCAGAACCGCTCGACACCGCCCTTTGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: WDPSQVPSVIRK*FQNRSTPPFGT Trigger: AGTGCCAAAGGGCGGTGTCGAGCGGTTCTGGAACCACTTCCGGATCACAGAAGGAACTTGGCTGGGGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CCA 72 bp | TCCTCTGCCTGGGCCCCCTCTGGACTTCTGGAAAGGTaGGCTTTGGAGCGAAGTATGCACTGCTCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSAWAPSGLLER*ALERSMHCSPL Trigger: CAGAGGAGAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAGTCCAGAGGGGGCCCAGGCAGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CAA 90 bp | GCACTGCTCTCCTCTGGTGGTGCTGGGGGTAAGGGTTGGTACTTCTaGGGGAGAGTGATAGCAGGCCGAGGAGGTGGCAAAGGAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALLSSGGAGGKGWYF*GRVIAGRGGGKGVL Trigger: CAAGACTCCTTTGCCACCTCCTCGGCCTGCTATCACTCTCCCCAAGAAGTACCAACCCTTACCCCCAGCACCACCAGAGGAGAGCAGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS TCA 72 bp | TTTTCTCCACCTGGGACCCCAGCCAAGTTCCTTCTGTaGTCCGGAAGTGGTTCCAGAACCGCTCGACACCGC | + |
|
Preference number: 6 (lower is better) Translates to: FSPPGTPAKFLL*SGSGSRTARHR Trigger: GCGGTGTCGAGCGGTTCTGGAACCACTTCCGGATCACAGAAGGAACTTGGCTGGGGTCCCAGGTGGAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS TCA 72 bp | ATTCGAGGGCTGTGGCTGGCTGCAGCTTGGCATCTCTaGGCAGGACAGTGCTGCATGCTACCTGTATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: IRGLWLAAAWHL*AGQCCMLPVWS Trigger: AGACCATACAGGTAGCATGCAGCACTGTCCTGCTCAGAGATGCCAAGCTGCAGCCAGCCACAGCCCTCGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS GCA 72 bp | CTTCTGGAAAGGTGGGCTTTGGAGCGAAGTATGCACTaGTCTCCTCTGGTGGTGCTGGGGGTAAGGGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLERWALERSMH*SPLVVLGVRVG Trigger: ACCAACCCTTACCCCCAGCACCACCAGAGGAGAGCAGTGCATACTTCGCTCCAAAGCCCACCTTTCCAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS GCA 72 bp | GTTTTCATAGGGCAGCATTCGAGGGCTGTGGCTGGCTaGAGCTTGGCATCTCTGAGCAGGACAGTGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VFIGQHSRAVAG*SLASLSRTVLH Trigger: ATGCAGCACTGTCCTGCTCAGAGATGCCAAGCTGCAGCCAGCCACAGCCCTCGAATGCTGCCCTATGAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS TCA 72 bp | GGTGGTGAGATTCTTCTTCTGCTCCAAGGACCCTACTaGAGTCTTTTGCACTCCTCTGCCTGGGCCCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGEILLLLQGPY*SLLHSSAWAPS Trigger: AGAGGGGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGTAGGGTCCTTGGAGCAGAAGAAGAATCTCACCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169819.5 |
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| CDS TCA 72 bp | GGTGGTGAGATTTGTGCTCCCTGCTGTTTACCCTACTaGAGTCTTTTGCACTCCTCTGCCTGGGCCCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGEICAPCCLPY*SLLHSSAWAPS Trigger: AGAGGGGGCCCAGGCAGAGGAGTGCAAAAGACTTCAGTAGGGTAAACAGCAGGGAGCACAAATCTCACCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171633.5 |
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| CDS CCA 72 bp | TTGTGTTTTCATAGGGCAGCATTCGAGGGCTGTGGCTaGCTGCAGCTTGGCATCTCTGAGCAGGACAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LCFHRAAFEGCG*LQLGISEQDSA Trigger: AGCACTGTCCTGCTCAGAGATGCCAAGCTGCAGCCAGCCACAGCCCTCGAATGCTGCCCTATGAAAACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CCA 72 bp | CATCCCTGGTTTGTCTCTCAGTGGAGACAGAAGCCTTaGGAGGTAACAGAAGGGGAGCCTCCATCGTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: HPWFVSQWRQKP*EVTEGEPPSYP Trigger: AGGATACGATGGAGGCTCCCCTTCTGTTACCTCCCAAGGCTTCTGTCTCCACTGAGAGACAAACCAGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS GCA 72 bp | CTGCAGCTTGGCATCTCTGAGCAGGACAGTGCTGCATaGTACCTGTATGGTCTCTGGCTTGTATACTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LQLGISEQDSAA*YLYGLWLVYCA Trigger: AGCACAGTATACAAGCCAGAGACCATACAGGTAGCATGCAGCACTGTCCTGCTCAGAGATGCCAAGCTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CCA 72 bp | GATGTGTCATCCTCACATCCCTGGTTTGTCTCTCAGTaGAGACAGAAGCCTTGGGAGGTAACAGAAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DVSSSHPWFVSQ*RQKPWEVTEGE Trigger: CTCCCCTTCTGTTACCTCCCAAGGCTTCTGTCTCCACTGAGAGACAAACCAGGGATGTGAGGATGACACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CAA 72 bp | TCTCATCAGGCTTTGTGGGGTCAGGTTTCTCCGAGTTaGTGTTTTCATAGGGCAGCATTCGAGGGCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHQALWGQVSPS*CFHRAAFEGCG Trigger: GCCACAGCCCTCGAATGCTGCCCTATGAAAACACAAACTCGGAGAAACCTGACCCCACAAAGCCTGATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CCA 72 bp | TGTCCACTTCTTCCAGATGTGTCATCCTCACATCCCTaGTTTGTCTCTCAGTGGAGACAGAAGCCTTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CPLLPDVSSSHP*FVSQWRQKPWE Trigger: CTCCCAAGGCTTCTGTCTCCACTGAGAGACAAACCAGGGATGTGAGGATGACACATCTGGAAGAAGTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CCA 72 bp | ACCTGTATGGTCTCTGGCTTGTATACTGTGCTTTCCTaGCATGTAGGAAGAGCTGGCAATGGCAGGTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: TCMVSGLYTVLS*HVGRAGNGRWT Trigger: AGTCCACCTGCCATTGCCAGCTCTTCCTACATGCCAGGAAAGCACAGTATACAAGCCAGAGACCATACAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CCA 72 bp | GAGCAGGACAGTGCTGCATGCTACCTGTATGGTCTCTaGCTTGTATACTGTGCTTTCCTGGCATGTAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EQDSAACYLYGL*LVYCAFLACRK Trigger: CTTCCTACATGCCAGGAAAGCACAGTATACAAGCCAGAGACCATACAGGTAGCATGCAGCACTGTCCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS GCA 72 bp | GCCTGGCGACTGTATTCTCCAATGTACCATTCATTCTaGCAGACATCCTTCTCATCAGGCTTTGTGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AWRLYSPMYHSF*QTSFSSGFVGS Trigger: TGACCCCACAAAGCCTGATGAGAAGGATGTCTGGCAGAATGAATGGTACATTGGAGAATACAGTCGCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CAA 72 bp | AGGACAGTGCTGCATGCTACCTGTATGGTCTCTGGCTaGTATACTGTGCTTTCCTGGCATGTAGGAAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTVLHATCMVSG*YTVLSWHVGRA Trigger: AGCTCTTCCTACATGCCAGGAAAGCACAGTATACAAGCCAGAGACCATACAGGTAGCATGCAGCACTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS GCA 72 bp | TTCCTCGTAGTCCTGTGCCCAGGGCAAACTGTTGATTaGTCTCGAGGAAACGGATTTTCACATTGTAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: FLVVLCPGQTVD*SRGNGFSHCRP Trigger: AGGTCTACAATGTGAAAATCCGTTTCCTCGAGAGCAATCAACAGTTTGCCCTGGGCACAGGACTACGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS GCA 72 bp | CCACAGAATCAAACATCTCATTTCCTCGTAGTCCTGTaGCCAGGGCAAACTGTTGATTGCTCTCGAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PQNQTSHFLVVL*PGQTVDCSRGN Trigger: GTTTCCTCGAGAGCAATCAACAGTTTGCCCTGGGCACAGGACTACGAGGAAATGAGATGTTTGATTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 72 bp | GAGCTGGCAATGGCAGGTGGACTCTTCTGTGTGTTTTaGTTTGATGATGGGCAAGAAGATTCTGGCTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ELAMAGGLFCVF*FDDGQEDSGFV Trigger: GACAAAGCCAGAATCTTCTTGCCCATCATCAAACCAAAACACACAGAAGAGTCCACCTGCCATTGCCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 72 bp | CTTGTATACTGTGCTTTCCTGGCATGTAGGAAGAGCTaGCAATGGCAGGTGGACTCTTCTGTGTGTTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LVYCAFLACRKS*QWQVDSSVCFG Trigger: ACCAAAACACACAGAAGAGTCCACCTGCCATTGCCAGCTCTTCCTACATGCCAGGAAAGCACAGTATACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CAA 90 bp | CTCCAATGTACCATTCATTCTGCCAGACATCCTTCTCATCAGGCTTaGTGGGGTCAGGTTTCTCCGAGTTTGTGTTTTCATAGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQCTIHSARHPSHQA*WGQVSPSLCFHRAA Trigger: TGCTGCCCTATGAAAACACAAACTCGGAGAAACCTGACCCCACAAAGCCTGATGAGAAGGATGTCTGGCAGAATGAATGGTACATTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS GCA 72 bp | AGATTCTGGCTTTGTCTGGTGGTGAGATTCTTCTTCTaGTCCAAGGACCCTACTGAAGTCTTTTGCACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RFWLCLVVRFFF*SKDPTEVFCTP Trigger: AGGAGTGCAAAAGACTTCAGTAGGGTCCTTGGAGCAGAAGAAGAATCTCACCACCAGACAAAGCCAGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169819.5 |
||
| CDS CAA 72 bp | TTAAAGCGTTGGCTTCTGACATCCTTGAAGGTAGGCTaGTCCACTTCTTCCAGATGTGTCATCCTCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: LKRWLLTSLKVG*STSSRCVILTS Trigger: GGATGTGAGGATGACACATCTGGAAGAAGTGGACAAGCCTACCTTCAAGGATGTCAGAAGCCAACGCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CAA 72 bp | TGGCAATGGCAGGTGGACTCTTCTGTGTGTTTTGGTTaGATGATGGGCAAGAAGATTCTGGCTTTGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WQWQVDSSVCFG*MMGKKILALSG Trigger: ACCAGACAAAGCCAGAATCTTCTTGCCCATCATCAAACCAAAACACACAGAAGAGTCCACCTGCCATTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CAA 90 bp | TTGAATCCTTTAAAGCGTTGGCTTCTGACATCCTTGAAGGTAGGCTaGTCCACTTCTTCCAGATGTGTCATCCTCACATCCCTGGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LNPLKRWLLTSLKVG*STSSRCVILTSLVC Trigger: ACAAACCAGGGATGTGAGGATGACACATCTGGAAGAAGTGGACAAGCCTACCTTCAAGGATGTCAGAAGCCAACGCTTTAAAGGATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
||
| CDS CCA 72 bp | ATTCATTCTGCCAGACATCCTTCTCATCAGGCTTTGTaGGGTCAGGTTTCTCCGAGTTTGTGTTTTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: IHSARHPSHQAL*GQVSPSLCFHR Trigger: CCTATGAAAACACAAACTCGGAGAAACCTGACCCCACAAAGCCTGATGAGAAGGATGTCTGGCAGAATGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CAA 72 bp | ACCATTCATTCTGCCAGACATCCTTCTCATCAGGCTTaGTGGGGTCAGGTTTCTCCGAGTTTGTGTTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: TIHSARHPSHQA*WGQVSPSLCFH Trigger: ATGAAAACACAAACTCGGAGAAACCTGACCCCACAAAGCCTGATGAGAAGGATGTCTGGCAGAATGAATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CAA 72 bp | TGTTTTGGTTTGATGATGGGCAAGAAGATTCTGGCTTaGTCTGGTGGTGAGATTCTTCTTCTGCTCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: CFGLMMGKKILA*SGGEILLLLQG Trigger: TCCTTGGAGCAGAAGAAGAATCTCACCACCAGACAAAGCCAGAATCTTCTTGCCCATCATCAAACCAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169819.5 |
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| CDS CAA 72 bp | TGTTTTGGTTTGATGATGGGCAAGAAGATTCTGGCTTaGTCTGGTGGTGAGATTTGTGCTCCCTGCTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: CFGLMMGKKILA*SGGEICAPCCL Trigger: TAAACAGCAGGGAGCACAAATCTCACCACCAGACAAAGCCAGAATCTTCTTGCCCATCATCAAACCAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171633.5 |
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| CDS CCA 72 bp | TCCTTGTTCTCTTTCATTAACACATCTTCCACTGCCTaGCGACTGTATTCTCCAATGTACCATTCATTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLFSFINTSSTA*RLYSPMYHSFC Trigger: GCAGAATGAATGGTACATTGGAGAATACAGTCGCCAGGCAGTGGAAGATGTGTTAATGAAAGAGAACAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CAA 72 bp | TATTTGAATCCTTTAAAGCGTTGGCTTCTGACATCCTaGAAGGTAGGCTTGTCCACTTCTTCCAGATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: YLNPLKRWLLTS*KVGLSTSSRCV Trigger: GACACATCTGGAAGAAGTGGACAAGCCTACCTTCAAGGATGTCAGAAGCCAACGCTTTAAAGGATTCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CAA 90 bp | ATTTTTGTGTATTTGAATCCTTTAAAGCGTTGGCTTCTGACATCCTaGAAGGTAGGCTTGTCCACTTCTTCCAGATGTGTCATCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: IFVYLNPLKRWLLTS*KVGLSTSSRCVILT Trigger: TGTGAGGATGACACATCTGGAAGAAGTGGACAAGCCTACCTTCAAGGATGTCAGAAGCCAACGCTTTAAAGGATTCAAATACACAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS CAA 90 bp | CAAAGGAGTCTTGTTTATTTTTGTGTATTTGAATCCTTTAAAGCGTaGGCTTCTGACATCCTTGAAGGTAGGCTTGTCCACTTCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QRSLVYFCVFESFKA*ASDILEGRLVHFFQ Trigger: CTGGAAGAAGTGGACAAGCCTACCTTCAAGGATGTCAGAAGCCAACGCTTTAAAGGATTCAAATACACAAAAATAAACAAGACTCCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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| CDS TCA 72 bp | CTATTAGCAGAATGGGAAAATATGTGTAGTGTTCAATaGTGTCTTCCACAGAATCAAACATCTCATTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLAEWENMCSVQ*CLPQNQTSHFL Trigger: GAGGAAATGAGATGTTTGATTCTGTGGAAGACATCATTGAACACTACACATATTTTCCCATTCTGCTAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169819.5 ENSMUST00000171633.5 |
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