Pregenerated sensors for CLN8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026317Ensembl transcript IDs: ENSMUST00000027554.8, ENSMUST00000123990.2, ENSMUST00000128839.2, ENSMUST00000133578.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCCAGGCCCTCGGATGGAACTGGGGGCCGAAAACAGCCAGCATTaGAGAGAAGGGAAGCTTAGGCGTGGCCTGAGCCTGGTCCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: APGPRMELGAENSQH*REGKLRRGLSLVLS Trigger: GCTGAGGACCAGGCTCAGGCCACGCCTAAGCTTCCCTTCTCTTCAATGCTGGCTGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR GCA 90 bp | AGTGTGGGCCACAGAGCAGGCCAGCCTAGGCTCACATTAGTGAGCTaGGGCTCCTCGTGTCCTCTGGACCATGCCCCTCTCCGAGATCTG | + |
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Preference number: 1 (lower is better) Translates to: SVGHRAGQPRLTLVS*GSSCPLDHAPLRDL Trigger: CAGATCTCGGAGAGGGGCATGGTCCAGAGGACACGAGGAGCCGCAGCTCACTAATGTGAGCCTAGGCTGGCCTGCTCTGTGGCCCACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | CAGCCTGCACACCTGGCTGCCATTGCTCCTTCCCTAGCACTGCCTTaGCAGATGTGCTGTGGTTGGGGCCACGCCAGAAGACTCAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: QPAHLAAIAPSLALP*QMCCGWGHARRLRG Trigger: TCCTCTGAGTCTTCTGGCGTGGCCCCAACCACAGCACATCTGCCAAGGCAGTGCTAGGGAAGGAGCAATGGCAGCCAGGTGTGCAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | GCCATAGTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTaGCTGTGTGAGATGGAGCTGGCTTCCTGGCCTCCTACCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: AIVPVLATCLSPKPF*LCEMELASWPPTLA Trigger: AGCCAGGGTAGGAGGCCAGGAAGCCAGCTCCATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAACTATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | GATGGCTCTGGCTTCTTCCTGCAGCTCCAGGCCCTCGGATGGAACTaGGGGCCGAAAACAGCCAGCATTGAAGAGAAGGGAAGCTTAGGC | + |
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Preference number: 1 (lower is better) Translates to: DGSGFFLQLQALGWN*GPKTASIEEKGSLG Trigger: GCCTAAGCTTCCCTTCTCTTCAATGCTGGCTGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGAGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR GCA 90 bp | ACCCAGGCTCAGGTGTCGCCCCTACGGCACACAGGAATGAGGCAATaGTTAGTTCCCATCAGGAGGGTCACCACAGGCTGTGTGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: TQAQVSPLRHTGMRQ*LVPIRRVTTGCVNR Trigger: TCTGTTCACACAGCCTGTGGTGACCCTCCTGATGGGAACTAAGCATTGCCTCATTCCTGTGTGCCGTAGGGGCGACACCTGAGCCTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | GGCTGCCATTGCTCCTTCCCTAGCACTGCCTTGGCAGATGTGCTGTaGTTGGGGCCACGCCAGAAGACTCAGAGGAAAGTCATGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: GCHCSFPSTALADVL*LGPRQKTQRKVMMA Trigger: TGCCATCATGACTTTCCTCTGAGTCTTCTGGCGTGGCCCCAACCACAGCACATCTGCCAAGGCAGTGCTAGGGAAGGAGCAATGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR TCA 90 bp | ATGTGCTGTGGTTGGGGCCACGCCAGAAGACTCAGAGGAAAGTCATaGTGGCAAAGACCTCTTCCAGGCACGTCGAGGCCCCAGCAATAC | + |
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Preference number: 1 (lower is better) Translates to: MCCGWGHARRLRGKS*WQRPLPGTSRPQQY Trigger: GTATTGCTGGGGCCTCGACGTGCCTGGAAGAGGTCTTTGCCATCATGACTTTCCTCTGAGTCTTCTGGCGTGGCCCCAACCACAGCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | GAGATCTGTCTGGCAGGACACTGGAGACCACAAAGGTACTATAGCTaGGAAGGGTGGCCCCTCTCTAGGCCAGTGTTCTCAACCTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: EICLAGHWRPQRYYS*EGWPLSRPVFSTCG Trigger: CCCACAGGTTGAGAACACTGGCCTAGAGAGGGGCCACCCTTCCCAGCTATAGTACCTTTGTGGTCTCCAGTGTCCTGCCAGACAGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | CTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGGAGCTaGCTTCCTGGCCTCCTACCCTGGCTTACCTTGTTGAATATGCCC | + |
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Preference number: 1 (lower is better) Translates to: LPVSPQSPSGCVRWS*LPGLLPWLTLLNMP Trigger: GGGCATATTCAACAAGGTAAGCCAGGGTAGGAGGCCAGGAAGCCAGCTCCATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | ATCATAGATGGCTCTGGCTTCTTCCTGCAGCTCCAGGCCCTCGGATaGAACTGGGGGCCGAAAACAGCCAGCATTGAAGAGAAGGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: IIDGSGFFLQLQALG*NWGPKTASIEEKGS Trigger: GCTTCCCTTCTCTTCAATGCTGGCTGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGAGCCATCTATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | CTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGGAGCTGGCTTCCTaGCCTCCTACCCTGGCTTACCTTGTTGAATATGCCCTCAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LSPKPFWLCEMELAS*PPTLAYLVEYALSK Trigger: TTTGCTGAGGGCATATTCAACAAGGTAAGCCAGGGTAGGAGGCCAGGAAGCCAGCTCCATCTCACACAGCCAGAAGGGCTTTGGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | TACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATaGAGCTGGCTTCCTGGCCTCCTACCCTGGCTTACCTTGTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: YWLPVSPQSPSGCVR*SWLPGLLPWLTLLN Trigger: ATTCAACAAGGTAAGCCAGGGTAGGAGGCCAGGAAGCCAGCTCCATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR GCA 90 bp | TGGGTACCACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTaGCTGGCTCTATCCCAGAATTCTTTCTGCCCCCTGGATGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: WVPHISLLMSYQATS*LALSQNSFCPLDVP Trigger: TGGAACATCCAGGGGGCAGAAAGAATTCTGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGTGGTACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | TCCAGTGCTACTTTGAGGAGCCTATGGTATGCTGCTGAGAGAAGTTaGAACCTCGTTGCTAAATTGAAGGGGCAAGGGCAAGCCATCGGG | + |
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Preference number: 1 (lower is better) Translates to: SSATLRSLWYAAERS*NLVAKLKGQGQAIG Trigger: CCCGATGGCTTGCCCTTGCCCCTTCAATTTAGCAACGAGGTTCCAACTTCTCTCAGCAGCATACCATAGGCTCCTCAAAGTAGCACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR TCA 90 bp | AGAAATGCCCGACTAAGACACTCTCTAACCCCATCCTGGTCCCATTaGAGACTTGCCAACATGTTCAGGACGCAGAGTGTTCTCAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: RNARLRHSLTPSWSH*RLANMFRTQSVLRH Trigger: GTGCCTGAGAACACTCTGCGTCCTGAACATGTTGGCAAGTCTTCAATGGGACCAGGATGGGGTTAGAGAGTGTCTTAGTCGGGCATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR TCA 90 bp | GGTAAAGAAACATTCCACGTAGGAAGTACTGGGCCTCTTCCTGACTaGAGCTGCCAGCACCTGACTTTGGACCTCCACCCTACAAAACTA | + |
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Preference number: 1 (lower is better) Translates to: GKETFHVGSTGPLPD*SCQHLTLDLHPTKL Trigger: TAGTTTTGTAGGGTGGAGGTCCAAAGTCAGGTGCTGGCAGCTTCAGTCAGGAAGAGGCCCAGTACTTCCTACGTGGAATGTTTCTTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | TTTGAAGTACAAGATTTCACACCACCACCACCACTCCAGGAGGGGTaGGCAGACTCTAGTAAGCCAAGGAGAACCCCTTACCATAACTCT | + |
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Preference number: 1 (lower is better) Translates to: FEVQDFTPPPPLQEG*ADSSKPRRTPYHNS Trigger: AGAGTTATGGTAAGGGGTTCTCCTTGGCTTACTAGAGTCTGCCCACCCCTCCTGGAGTGGTGGTGGTGGTGTGAAATCTTGTACTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | ACAGAGGTTACCTTCCATTGGGTGGTTCACCCACTCACTTGCCAGTaGCTGGGCAGCCATCACTGGAAATGGTCAGAGAACTGTAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: TEVTFHWVVHPLTCQ*LGSHHWKWSENCKN Trigger: ATTTTTACAGTTCTCTGACCATTTCCAGTGATGGCTGCCCAGCCACTGGCAAGTGAGTGGGTGAACCACCCAATGGAAGGTAACCTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR TCA 90 bp | ACTTGCCAACATGTTCAGGACGCAGAGTGTTCTCAGGCACTCAGGTaGGCTTCGGGTCACGTTATCAGACAGGAAGTATGTTTGGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: TCQHVQDAECSQALR*ASGHVIRQEVCLGF Trigger: AAAACCCAAACATACTTCCTGTCTGATAACGTGACCCGAAGCTCACCTGAGTGCCTGAGAACACTCTGCGTCCTGAACATGTTGGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | GATATAAACTTATCTATGTCCCCATCCATACGTAAAGAGTCACTGTaGAGCTTTGTCCAACCCTGGACACTCCCCAGTCGGCATCATGGT | + |
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Preference number: 1 (lower is better) Translates to: DINLSMSPSIRKESL*SFVQPWTLPSRHHG Trigger: ACCATGATGCCGACTGGGGAGTGTCCAGGGTTGGACAAAGCTCCACAGTGACTCTTTACGTATGGATGGGGACATAGATAAGTTTATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | CACTCAGGTGAGCTTCGGGTCACGTTATCAGACAGGAAGTATGTTTaGGTTTTGGAAAGAGCTGTCACTATATTAAGCCTCTGCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: HSGELRVTLSDRKYV*VLERAVTILSLCPA Trigger: AGCTGGGCAGAGGCTTAATATAGTGACAGCTCTTTCCAAAACCCAAACATACTTCCTGTCTGATAACGTGACCCGAAGCTCACCTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CCA 90 bp | ATTTATTTTAATCTACATTTTGCCATGTGGCTGGTTACCTGTGTTTaGGTACCACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCC | + |
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Preference number: 1 (lower is better) Translates to: IYFNLHFAMWLVTCV*VPHISLLMSYQATS Trigger: GGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGTGGTACCCAAACACAGGTAACCAGCCACATGGCAAAATGTAGATTAAAATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR TCA 90 bp | TTTTGCCTAAGCCGTAGGCCACACATAGGCTTTTTAATTGACAGGTaGCGCATCCATACAATACATACAATATTCTCTCTACAGGGAACA | + |
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Preference number: 1 (lower is better) Translates to: FCLSRRPHIGFLIDR*RIHTIHTIFSLQGT Trigger: TGTTCCCTGTAGAGAGAATATTGTATGTATTGTATGGATGCGTCACCTGTCAATTAAAAAGCCTATGTGTGGCCTACGGCTTAGGCAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR TCA 90 bp | AATATGATCAGCAAATCACATTTTCTTAGGGTCAATTTGTTGCAATaGAAAAGAACACGACTTCCAAATAAGGCACACCCACACCCACAC | + |
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Preference number: 1 (lower is better) Translates to: NMISKSHFLRVNLLQ*KRTRLPNKAHPHPH Trigger: GTGTGGGTGTGGGTGTGCCTTATTTGGAAGTCGTGTTCTTTTTCATTGCAACAAATTGACCCTAAGAAAATGTGATTTGCTGATCATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCTTCTTCCTGCAGCTCCAGGCCCTCGGATGGAACTGGGGGCCGAAAACACGCAGGGCTCCAGACTaGCTTCCTCAGCAGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SGFFLQLQALGWNWGPKTRRAPD*LPQQPA Trigger: TGCAGGCTGCTGAGGAAGCCAGTCTGGAGCCCTGCG...TGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CAA 90 bp | GGGGGAGGGCCCATTGTGGGTGGTGCCAACCTTGGGCTGGTAGTCTaGGCTTCTTTAAGAGAGCAGGCTGAGAAAGCCAGGGCAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GGGPIVGGANLGLVV*ASLREQAEKARASQ Trigger: CTGGCTTGCCCTGGCTTTCTCAGCCTGCTCTCTTAAAGAAGCCAAGACTACCAGCCCAAGGTTGGCACCACCCACAATGGGCCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCTTCTTCCTGCAGCTCCAGGCCCTCGGATGGAACTGGGGGCCGAAAACATGTGTGAGATGGAGCTaGCTTCCTGGCCTCCTACCC | + |
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Preference number: 2 (lower is better) Translates to: SGFFLQLQALGWNWGPKTCVRWS*LPGLLP Trigger: GGGTAGGAGGCCAGGAAGCCAGCTCCATCTCACACA...TGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGAGCAGCCTGCACACCTaGCTGCCATTGCTCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: VPVLATCLSPKPFWLCEMSSLHT*LPLLLP Trigger: GGGAAGGAGCAATGGCAGCCAGGTGTGCAGGCTGCT...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCTTCTTCCTGCAGCTCCAGGCCCTCGGATGGAACTGGGGGCCGAAAACAAGTCACATCAACCCATaGCCTCTGCATCAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SGFFLQLQALGWNWGPKTSHINP*PLHQLL Trigger: CAGGAGCTGATGCAGAGGCCATGGGTTGATGTGACT...TGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | ACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTGGCTCTATCCCAGAATCTTGGCCAGTGTaGGCCACAGAGCAGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: THQSPHVLPGDLLPGSIPESWPV*ATEQAS Trigger: GCTGGCCTGCTCTGTGGCCCACACTGGCCAAGATTC...TGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAAGACTAGCGCCATAGTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGGCTCCTCGTGTCCTCTaGACCATGCCCCTCTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: RGKTSAIVPVLATCLSPKAPRVL*TMPLSE Trigger: CTCGGAGAGGGGCATGGTCCAGAGGACACGAGGAGC...CTTTGGGGAGAGACAGGTAGCCAGTACAGGAACTATGGCGCTAGTCTTTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CAA 90 bp | TGCCATTGCTCCTTCCCTAGCACTGCCTTGGCAGATGTGCTGTGGTaGGGGCCACGCCAGAAGACTCAGAGGAAAGTCATGATGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: CHCSFPSTALADVLW*GPRQKTQRKVMMAK Trigger: CTTTGCCATCATGACTTTCCTCTGAGTCTTCTGGCGTGGCCCCAACCACAGCACATCTGCCAAGGCAGTGCTAGGGAAGGAGCAATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAAAGACTAGCGCCATAGTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGGCTTCCTCAGCAGCCTaGACACCTGGCTGCCATTGC | + |
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Preference number: 2 (lower is better) Translates to: RGKTSAIVPVLATCLSPKASSAA*TPGCHC Trigger: GCAATGGCAGCCAGGTGTGCAGGCTGCTGAGGAAGC...CTTTGGGGAGAGACAGGTAGCCAGTACAGGAACTATGGCGCTAGTCTTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR GCA 90 bp | ACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTGGCTCTATCCCACTCACATTAGTGAGCTaGGGCTCCTCGTGTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: THQSPHVLPGDLLPGSIPLTLVS*GSSCPL Trigger: CAGAGGACACGAGGAGCCGCAGCTCACTAATGTGAG...TGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAAGACTAGCGCCATAGTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCACTCACTTGCCAGTaGCTGGGCAGCCATCACTGG | + |
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Preference number: 2 (lower is better) Translates to: RGKTSAIVPVLATCLSPKPLTCQ*LGSHHW Trigger: CCAGTGATGGCTGCCCAGCCACTGGCAAGTGAGTGG...CTTTGGGGAGAGACAGGTAGCCAGTACAGGAACTATGGCGCTAGTCTTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CAA 90 bp | TGGCGAGAGAGCCACTACTCTAGGCAGGGACTAGTGCTTGCTCCATaGCAGAGCCTTCTCATGAATACTTGTCTCCAAGGTTCCGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: WRESHYSRQGLVLAP*QSLLMNTCLQGSGE Trigger: CTCCCCGGAACCTTGGAGACAAGTATTCATGAGAAGGCTCTGCAATGGAGCAAGCACTAGTCCCTGCCTAGAGTAGTGGCTCTCTCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | ACACGACTTCCAAATAAGGCACACCCACACCCACACGAGGTCCTTCCCGATGAAAGCTTTGTCCAACCCTaGACACTCCCCAGTCGGCAT | + |
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Preference number: 2 (lower is better) Translates to: TRLPNKAHPHPHEVLPDESFVQP*TLPSRH Trigger: ATGCCGACTGGGGAGTGTCCAGGGTTGGACAAAGCT...TTCATCGGGAAGGACCTCGTGTGGGTGTGGGTGTGCCTTATTTGGAAGTCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGCAAAGGTACTATAGCTaGGAAGGGTGGCCCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: VPVLATCLSPKPFWLCEMQRYYS*EGWPLS Trigger: AGAGAGGGGCCACCCTTCCCAGCTATAGTACCTTTG...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CAA 90 bp | AGCCTATGGTATGCTGCTGAGAGAAGTTGGAACCTCGTTGCTAAATaGAAGGGGCAAGGGCAAGCCATCGGGAAAAGGGCAAGCCATCGG | + |
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Preference number: 2 (lower is better) Translates to: SLWYAAERSWNLVAK*KGQGQAIGKRASHR Trigger: CCGATGGCTTGCCCTTTTCCCGATGGCTTGCCCTTGCCCCTTCAATTTAGCAACGAGGTTCCAACTTCTCTCAGCAGCATACCATAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAAAGACTAGCGCCATAGTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGTCTCAGGCACTCAGGTaGGCTTCGGGTCACGTTATC | + |
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Preference number: 2 (lower is better) Translates to: RGKTSAIVPVLATCLSPKSQALR*ASGHVI Trigger: GATAACGTGACCCGAAGCTCACCTGAGTGCCTGAGA...CTTTGGGGAGAGACAGGTAGCCAGTACAGGAACTATGGCGCTAGTCTTTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | ACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTGGCTCTATCCCAGAGAACATGTTCCCATaGTCATGTCAGGCAAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: THQSPHVLPGDLLPGSIPENMFP*SCQARC Trigger: GCACCTTGCCTGACATGACCATGGGAACATGTTCTC...TGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGAGGTCACCTGAGCTATaGAATGGCACTCAGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: VPVLATCLSPKPFWLCEMRSPEL*NGTQLT Trigger: TGTCAGCTGAGTGCCATTCCATAGCTCAGGTGACCT...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CAA 90 bp | ACTTATCTATGTCCCCATCCATACGTAAAGAGTCACTGTGGAGCTTaGTCCAACCCTGGACACTCCCCAGTCGGCATCATGGTCCACCCA | + |
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Preference number: 2 (lower is better) Translates to: TYLCPHPYVKSHCGA*SNPGHSPVGIMVHP Trigger: TGGGTGGACCATGATGCCGACTGGGGAGTGTCCAGGGTTGGACAAAGCTCCACAGTGACTCTTTACGTATGGATGGGGACATAGATAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CAA 90 bp | GCAGGGACTAGTGCTTGCTCCATTGCAGAGCCTTCTCATGAATACTaGTCTCCAAGGTTCCGGGGAGAAGTCCTGGTCAGAAAGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: AGTSACSIAEPSHEY*SPRFRGEVLVRKEM Trigger: CATCTCCTTTCTGACCAGGACTTCTCCCCGGAACCTTGGAGACAAGTATTCATGAGAAGGCTCTGCAATGGAGCAAGCACTAGTCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR CAA 90 bp | TTCTTTAACTGTTCTCTGGGAAAGTTTTTGTGTCTGCCGATAGCATaGCTAGCCGGTGTCTGGAGGTCTAACCTGCAAACAGCGCGGCGA | + |
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Preference number: 2 (lower is better) Translates to: FFNCSLGKFLCLPIA*LAGVWRSNLQTARR Trigger: TCGCCGCGCTGTTTGCAGGTTAGACCTCCAGACACCGGCTAGCAATGCTATCGGCAGACACAAAAACTTTCCCAGAGAACAGTTAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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| 3UTR-3UTR GCA 90 bp | CAATGCTTAGTTCCCATCAGGAGGGTCACCACAGGCTGTGTGAACAGAGACTTAATAACTCTGTCCTTCTaGCTCTTGCCACTAGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: QCLVPIRRVTTGCVNRDLITLSF*LLPLEG Trigger: GCCCTCTAGTGGCAAGAGGCAGAAGGACAGAGTTAT...TAAGTCTCTGTTCACACAGCCTGTGGTGACCCTCCTGATGGGAACTAAGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGCAACGAAAATAACTTCATGGTTGGGGATCACCACAGCATGAGCAACTGTCCACTCCAGGAGGGGTaGGCAGACTCTAGTAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSNENNFMVGDHHSMSNCPLQEG*ADSSKP Trigger: TGGCTTACTAGAGTCTGCCCACCCCTCCTGGAGTGG...ACAGTTGCTCATGCTGTGGTGATCCCCAACCATGAAGTTATTTTCGTTGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CCA 90 bp | CAATGCTTAGTTCCCATCAGGAGGGTCACCACAGGCTGTGTGAACAGAGACTTAACAAAAATGCCAGGCTaGTGCCTCAACAAAGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: QCLVPIRRVTTGCVNRDLTKMPG*CLNKAD Trigger: GTCTGCTTTGTTGAGGCACCAGCCTGGCATTTTTGT...TAAGTCTCTGTTCACACAGCCTGTGGTGACCCTCCTGATGGGAACTAAGCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTCTGTGGCTGGAGCCTGAGGACTAGTGTATACAATACAAACATTTACCACGCGTCTCTTCTCCAGTaGCTGAAGACAGAAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: WFCGWSLRTSVYNTNIYHASLLQ*LKTEAR Trigger: CCTGGCTTCTGTCTTCAGCCACTGGAGAAGAGACGC...GTGGTAAATGTTTGTATTGTATACACTAGTCCTCAGGCTCCAGCCACAGAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTGGCTCTATCCCAGTCAATTTGTTGCAATaGAAAAGAACACGACTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: THQSPHVLPGDLLPGSIPVNLLQ*KRTRLP Trigger: TGGAAGTCGTGTTCTTTTTCATTGCAACAAATTGAC...TGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAGACAGAAGCCAGGAAGGCTTCCTACATGCTAAGTAAGTTCTCTACTACCTCCTGCTTCCTGACCTaGTTGAGTTCTAGTCCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LKTEARKASYMLSKFSTTSCFLT*LSSSPD Trigger: GTCAGGACTAGAACTCAAGCAGGTCAGGAAGCAGGA...GGTAGTAGAGAACTTACTTAGCATGTAGGAAGCCTTCCTGGCTTCTGTCTTCAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAGACAGAAGCCAGGAAGGCTTCCTACATGCTAAGTAAGTTCTCTACTACCCGTAAAGAGTCACTGTaGAGCTTTGTCCAACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LKTEARKASYMLSKFSTTRKESL*SFVQPW Trigger: CCAGGGTTGGACAAAGCTCCACAGTGACTCTTTACG...GGTAGTAGAGAACTTACTTAGCATGTAGGAAGCCTTCCTGGCTTCTGTCTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTGGCTCTATCCCATCTTTAACTGTTCTCTaGGAAAGTTTTTGTGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: THQSPHVLPGDLLPGSIPSLTVL*ESFCVC Trigger: GCAGACACAAAAACTTTCCCAGAGAACAGTTAAAGA...TGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGAGCCATCACTGGAAATaGTCAGAGAACTGTAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VPVLATCLSPKPFWLCEMSHHWK*SENCKN Trigger: ATTTTTACAGTTCTCTGACCATTTCCAGTGATGGCT...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTCTGTGGCTGGAGCCTGAGGACTAGTGTATACAATACAAACATTTACCACCTCACTTGGGCTTCCTaGATCTTTTCAGCCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: WFCGWSLRTSVYNTNIYHLTWAS*IFSALL Trigger: CAGAAGGGCTGAAAAGATTCAGGAAGCCCAAGTGAG...GTGGTAAATGTTTGTATTGTATACACTAGTCCTCAGGCTCCAGCCACAGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAGACAGAAGCCAGGAAGGCTTCCTACATGCTAAGTAAGTTCTCTACTACCAAAATGCCAGGCTGGTaGCTCAACAAAGCAGACACA | + |
|
Preference number: 2 (lower is better) Translates to: LKTEARKASYMLSKFSTTKMPGW*LNKADT Trigger: TGTGTCTGCTTTGTTGAGGCACCAGCCTGGCATTTT...GGTAGTAGAGAACTTACTTAGCATGTAGGAAGCCTTCCTGGCTTCTGTCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAGACAGAAGCCAGGAAGGCTTCCTACATGCTAAGTAAGTTCTCTACTACCGTCCCATTGAAGACTTaGCAACATGTTCAGGACGCA | + |
|
Preference number: 2 (lower is better) Translates to: LKTEARKASYMLSKFSTTVPLKT*QHVQDA Trigger: TGCGTCCTGAACATGTTGGCAAGTCTTCAATGGGAC...GGTAGTAGAGAACTTACTTAGCATGTAGGAAGCCTTCCTGGCTTCTGTCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR TCA 90 bp | TTACCACTGAGCTCTCTCTCTAACCCTAGGCAATTAAAAATTTGTAACAGAAATCCAGCGAAAGTCAGATaGTCTCCCTGTCCCAGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: LPLSSLSNPRQLKICNRNPAKVR*SPCPSR Trigger: GCGGCTGGGACAGGGAGATCATCTGACTTTCGCTGG...ATTTCTGTTACAAATTTTTAATTGCCTAGGGTTAGAGAGAGAGCTCAGTGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACCACTGAGCTCTCTCTCTAACCCTAGGCAATTAAAAATTTGTAACAGAAATGCTCTGGCTTCTTCCTaGAGCTCCAGGCCCTCGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LPLSSLSNPRQLKICNRNALASS*SSRPSD Trigger: ATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGAGC...ATTTCTGTTACAAATTTTTAATTGCCTAGGGTTAGAGAGAGAGCTCAGTGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGCAACGAAAATAACTTCATGGTTGGGGATCACCACAGCATGAGCAACTGTTTGGTCATGATGTTTTaGGCAGGAATAGAAATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SSNENNFMVGDHHSMSNCLVMMF*AGIEMP Trigger: GGGCATTTCTATTCCTGCCCAAAACATCATGACCAA...ACAGTTGCTCATGCTGTGGTGATCCCCAACCATGAAGTTATTTTCGTTGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTCTGTGGCTGGAGCCTGAGGACTAGTGTATACAATACAAACATTTACCACTCTTTTCAGCCCTTCTaGTCCTTAGATATATGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: WFCGWSLRTSVYNTNIYHSFQPF*SLDIWH Trigger: ATGCCATATATCTAAGGAGCAGAAGGGCTGAAAAGA...GTGGTAAATGTTTGTATTGTATACACTAGTCCTCAGGCTCCAGCCACAGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR TCA 90 bp | TTACCACTGAGCTCTCTCTCTAACCCTAGGCAATTAAAAATTTGTAACAGAAATCTCAGAGGAAAGTCATaGTGGCAAAGACCTCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LPLSSLSNPRQLKICNRNLRGKS*WQRPLP Trigger: TGGAAGAGGTCTTTGCCATCATGACTTTCCTCTGAG...ATTTCTGTTACAAATTTTTAATTGCCTAGGGTTAGAGAGAGAGCTCAGTGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCACTGAGCTCTCTCTCTAACCCTAGGCAATTAAAAATTTGTAACAGAAATTGTCTGGCAGGACACTaGAGACCACAAAGGTACTAT | + |
|
Preference number: 2 (lower is better) Translates to: LPLSSLSNPRQLKICNRNCLAGH*RPQRYY Trigger: ATAGTACCTTTGTGGTCTCCAGTGTCCTGCCAGACA...ATTTCTGTTACAAATTTTTAATTGCCTAGGGTTAGAGAGAGAGCTCAGTGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | CACAGAGCAGGCCAGCCTAGGCTCACATTAGTGAGCTaGGGCTCCTCGTGTCCTCTGGACCATGCCCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRAGQPRLTLVS*GSSCPLDHAPL Trigger: GAGAGGGGCATGGTCCAGAGGACACGAGGAGCCGCAGCTCACTAATGTGAGCCTAGGCTGGCCTGCTCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | AAGCCATCGGGAAAAGGGCAAGCCATCGGGAAGAGATaGGGAAGACGCTGGGCTGCTGCCCCTGACCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: KPSGKGQAIGKR*GRRWAAAPDHH Trigger: GTGATGGTCAGGGGCAGCAGCCCAGCGTCTTCCCCATCTCTTCCCGATGGCTTGCCCTTTTCCCGATGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | GGCTCTGGCTTCTTCCTGCAGCTCCAGGCCCTCGGATaGAACTGGGGGCCGAAAACAGCCAGCATTGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSGFFLQLQALG*NWGPKTASIEE Trigger: CTCTTCAATGCTGGCTGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR TCA 72 bp | GGTTGGGGCCACGCCAGAAGACTCAGAGGAAAGTCATaGTGGCAAAGACCTCTTCCAGGCACGTCGAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GWGHARRLRGKS*WQRPLPGTSRP Trigger: GGGCCTCGACGTGCCTGGAAGAGGTCTTTGCCATCATGACTTTCCTCTGAGTCTTCTGGCGTGGCCCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR TCA 72 bp | CCTCGGATGGAACTGGGGGCCGAAAACAGCCAGCATTaGAGAGAAGGGAAGCTTAGGCGTGGCCTGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PRMELGAENSQH*REGKLRRGLSL Trigger: CAGGCTCAGGCCACGCCTAAGCTTCCCTTCTCTTCAATGCTGGCTGTTTTCGGCCCCCAGTTCCATCCGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | CCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTaGCTGTGTGAGATGGAGCTGGCTTCCTGGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PVLATCLSPKPF*LCEMELASWPP Trigger: AGGAGGCCAGGAAGCCAGCTCCATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | GGCTTCTTCCTGCAGCTCCAGGCCCTCGGATGGAACTaGGGGCCGAAAACAGCCAGCATTGAAGAGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GFFLQLQALGWN*GPKTASIEEKG Trigger: TCCCTTCTCTTCAATGCTGGCTGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | CAGGTGTCGCCCCTACGGCACACAGGAATGAGGCAATaGTTAGTTCCCATCAGGAGGGTCACCACAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QVSPLRHTGMRQ*LVPIRRVTTGC Trigger: ACAGCCTGTGGTGACCCTCCTGATGGGAACTAAGCATTGCCTCATTCCTGTGTGCCGTAGGGGCGACACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | CTAACCTGCAAACAGCGCGGCGAGAACATGTTCCCATaGTCATGTCAGGCAAGGTGCTTGCTCGGGGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LTCKQRGENMFP*SCQARCLLGAL Trigger: TAGGGCCCCGAGCAAGCACCTTGCCTGACATGACCATGGGAACATGTTCTCGCCGCGCTGTTTGCAGGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | CCGTGGAAGCCACAGGGCCTACTGAGGAGCTGTCTGTaGAAGGAGAGCCTTGTGACCCATAGGCTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PWKPQGLLRSCL*KESLVTHRLHR Trigger: TCTGTGAAGCCTATGGGTCACAAGGCTCTCCTTCCACAGACAGCTCCTCAGTAGGCCCTGTGGCTTCCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | TCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGGAGCTaGCTTCCTGGCCTCCTACCCTGGCTTACCTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPQSPSGCVRWS*LPGLLPWLTLL Trigger: CAACAAGGTAAGCCAGGGTAGGAGGCCAGGAAGCCAGCTCCATCTCACACAGCCAGAAGGGCTTTGGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | AGCCAAGGAGAACCCCTTACCATAACTCTGTCCTTCTaGCTCTTGCCACTAGAGGGCAGTGCACTGCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: SQGEPLTITLSF*LLPLEGSALPR Trigger: CCGTGGCAGTGCACTGCCCTCTAGTGGCAAGAGGCAGAAGGACAGAGTTATGGTAAGGGGTTCTCCTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | CACTGGAGACCACAAAGGTACTATAGCTGGGAAGGGTaGCCCCTCTCTAGGCCAGTGTTCTCAACCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HWRPQRYYSWEG*PLSRPVFSTCG Trigger: CCCACAGGTTGAGAACACTGGCCTAGAGAGGGGCCACCCTTCCCAGCTATAGTACCTTTGTGGTCTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | CTGGCAGGACACTGGAGACCACAAAGGTACTATAGCTaGGAAGGGTGGCCCCTCTCTAGGCCAGTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LAGHWRPQRYYS*EGWPLSRPVFS Trigger: TGAGAACACTGGCCTAGAGAGGGGCCACCCTTCCCAGCTATAGTACCTTTGTGGTCTCCAGTGTCCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGTTCCCTAGCACTGCCTaGGCAGATGTGCTGTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VPVLATCLSPKPFWLCEMFPSTA*ADVLWL Trigger: CAACCACAGCACATCTGCCAAGGCAGTGCTAGGGAA...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | CACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTaGCTGGCTCTATCCCAGAATTCTTTCTGCCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HISLLMSYQATS*LALSQNSFCPL Trigger: CAGGGGGCAGAAAGAATTCTGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | GAGGTTACCTTCCATTGGGTGGTTCACCCACTCACTTaGCAGTGGCTGGGCAGCCATCACTGGAAATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: EVTFHWVVHPLT*QWLGSHHWKWS Trigger: TGACCATTTCCAGTGATGGCTGCCCAGCCACTGGCAAGTGAGTGGGTGAACCACCCAATGGAAGGTAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | TCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTaGCTCTATCCCAGAATTCTTTCTGCCCCCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SVSSCLTRRPPA*LYPRILSAPWM Trigger: CATCCAGGGGGCAGAAAGAATTCTGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | ACCTTCCATTGGGTGGTTCACCCACTCACTTGCCAGTaGCTGGGCAGCCATCACTGGAAATGGTCAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TFHWVVHPLTCQ*LGSHHWKWSEN Trigger: GTTCTCTGACCATTTCCAGTGATGGCTGCCCAGCCACTGGCAAGTGAGTGGGTGAACCACCCAATGGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | AAGCCCTTCTGGCTGTGTGAGATGGAGCTGGCTTCCTaGCCTCCTACCCTGGCTTACCTTGTTGAATATGCC | + |
|
Preference number: 3 (lower is better) Translates to: KPFWLCEMELAS*PPTLAYLVEYA Trigger: GGCATATTCAACAAGGTAAGCCAGGGTAGGAGGCCAGGAAGCCAGCTCCATCTCACACAGCCAGAAGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGCTTCTTCCTGCAGCTCCAGGCCCTCGGATGGAACTGGGGGCCGAAAACACTTGGTCATGATGTTTaGGGCAGGAATAGAAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: SGFFLQLQALGWNWGPKTLGHDV*GRNRNA Trigger: GGCATTTCTATTCCTGCCCAAAACATCATGACCAAG...TGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | AACTCTGTCCTTCTGCCTCTTGCCACTAGAGGGCAGTaGACTGCCACGGGCTTAAAATTCCCCAGGCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NSVLLPLATRGQ*TATGLKFPRLV Trigger: TACTAGCCTGGGGAATTTTAAGCCCGTGGCAGTGCACTGCCCTCTAGTGGCAAGAGGCAGAAGGACAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | GACCTCCACCCTACAAAACTAGAAATGGCTAGTCTCTaGTCTTTCTCTAGGACCCAGGCTCAGGTGTCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DLHPTKLEMASL*SFSRTQAQVSP Trigger: GGGCGACACCTGAGCCTGGGTCCTAGAGAAAGAGCAGAGACTAGCCATTTCTAGTTTTGTAGGGTGGAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | TCCGGGGAGAAGTCCTGGTCAGAAAGGAGATGTGTGTaGAGTGACCAAAGGTCACCTGAGCTATGGAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SGEKSWSERRCV*SDQRSPELWNG Trigger: GCCATTCCATAGCTCAGGTGACCTTTGGTCACTCCACACACATCTCCTTTCTGACCAGGACTTCTCCCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | TCCATTGGGTGGTTCACCCACTCACTTGCCAGTGGCTaGGCAGCCATCACTGGAAATGGTCAGAGAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SIGWFTHSLASG*AAITGNGQRTV Trigger: TACAGTTCTCTGACCATTTCCAGTGATGGCTGCCCAGCCACTGGCAAGTGAGTGGGTGAACCACCCAATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACAGGAATGAGGCAATGCTTAGTTCCCATCAGGAGGGTCACCACAGGCTGTGGTCCCATTGAAGACTaGCCAACATGTTCAGGACGC | + |
|
Preference number: 3 (lower is better) Translates to: HTGMRQCLVPIRRVTTGCGPIED*PTCSGR Trigger: GCGTCCTGAACATGTTGGCAAGTCTTCAATGGGACC...ACAGCCTGTGGTGACCCTCCTGATGGGAACTAAGCATTGCCTCATTCCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTGGCTCTATCCCATGCTTCCTGACCTGCTaGAGTTCTAGTCCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: THQSPHVLPGDLLPGSIPCFLTC*SSSPDF Trigger: GAAGTCAGGACTAGAACTCAAGCAGGTCAGGAAGCA...TGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR TCA 72 bp | ACTCAGCTGACACACGTGAAGACGGAGGATGTAACCTaGGGTCACACTCCTTGTAGAGGCCAGCGAAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TQLTHVKTEDVT*GHTPCRGQRKS Trigger: TGACTTTCGCTGGCCTCTACAAGGAGTGTGACCTCAGGTTACATCCTCCGTCTTCACGTGTGTCAGCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | GCGACCTCCTGCCTGGCTCTATCCCAGAATTCTTTCTaGCCCCTGGATGTTCCACCTTCTAGTTTTTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: ATSCLALSQNSF*PLDVPPSSFCL Trigger: TAGGCAAAAACTAGAAGGTGGAACATCCAGGGGGCAGAAAGAATTCTGGGATAGAGCCAGGCAGGAGGTCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | TTTTTGTGTCTGCCGATAGCATTGCTAGCCGGTGTCTaGAGGTCTAACCTGCAAACAGCGCGGCGAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: FLCLPIALLAGV*RSNLQTARREH Trigger: ATGTTCTCGCCGCGCTGTTTGCAGGTTAGACCTCCAGACACCGGCTAGCAATGCTATCGGCAGACACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | CTCACTTGCCAGTGGCTGGGCAGCCATCACTGGAAATaGTCAGAGAACTGTAAAAATCACCTCCGGTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LTCQWLGSHHWK*SENCKNHLRFS Trigger: GGAGAACCGGAGGTGATTTTTACAGTTCTCTGACCATTTCCAGTGATGGCTGCCCAGCCACTGGCAAGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCAACGAAAATAACTTCATGGTTGGGGATCACCACAGCATGAGCAACTGTTGTCAGGCAAGGTGCTaGCTCGGGGCCCTAGCGACT | + |
|
Preference number: 3 (lower is better) Translates to: SSNENNFMVGDHHSMSNCCQARC*LGALAT Trigger: AGTCGCTAGGGCCCCGAGCAAGCACCTTGCCTGACA...ACAGTTGCTCATGCTGTGGTGATCCCCAACCATGAAGTTATTTTCGTTGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGCTCCAGGAAACTCACTaGGGCTTCCTGAATCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VPVLATCLSPKPFWLCEMLQETH*GFLNLF Trigger: GAAAAGATTCAGGAAGCCCAAGTGAGTTTCCTGGAG...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGAAAGACTAGCGCCATAGTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTGGCTTACCTTGTaGAATATGCCCTCAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RGKTSAIVPVLATCLSPKPWLTL*NMPSAN Trigger: GTTTGCTGAGGGCATATTCAACAAGGTAAGCCAGGG...CTTTGGGGAGAGACAGGTAGCCAGTACAGGAACTATGGCGCTAGTCTTTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR TCA 72 bp | CATGTTCAGGACGCAGAGTGTTCTCAGGCACTCAGGTaGGCTTCGGGTCACGTTATCAGACAGGAAGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: HVQDAECSQALR*ASGHVIRQEVC Trigger: ACATACTTCCTGTCTGATAACGTGACCCGAAGCTCACCTGAGTGCCTGAGAACACTCTGCGTCCTGAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR TCA 72 bp | TGGGCTGGTAGTCTTGGCTTCTTTAAGAGAGCAGGCTaGGAAAGCCAGGGCAAGCCAGTAAGTCACATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: WAGSLGFFKRAG*ESQGKPVSHIN Trigger: GTTGATGTGACTTACTGGCTTGCCCTGGCTTTCTCAGCCTGCTCTCTTAAAGAAGCCAAGACTACCAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | ACACTCTCTAACCCCATCCTGGTCCCATTGAAGACTTaGCAACATGTTCAGGACGCAGAGTGTTCTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLSNPILVPLKT*QHVQDAECSQA Trigger: TGCCTGAGAACACTCTGCGTCCTGAACATGTTGGCAAGTCTTCAATGGGACCAGGATGGGGTTAGAGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | TTATCTATGTCCCCATCCATACGTAAAGAGTCACTGTaGAGCTTTGTCCAACCCTGGACACTCCCCAGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: LSMSPSIRKESL*SFVQPWTLPSR Trigger: CCGACTGGGGAGTGTCCAGGGTTGGACAAAGCTCCACAGTGACTCTTTACGTATGGATGGGGACATAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | TGCTGCACCAAGTCCAGTGCTACTTTGAGGAGCCTATaGTATGCTGCTGAGAGAAGTTGGAACCTCGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CCTKSSATLRSL*YAAERSWNLVA Trigger: AGCAACGAGGTTCCAACTTCTCTCAGCAGCATACCATAGGCTCCTCAAAGTAGCACTGGACTTGGTGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR TCA 72 bp | CGACTAAGACACTCTCTAACCCCATCCTGGTCCCATTaGAGACTTGCCAACATGTTCAGGACGCAGAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLRHSLTPSWSH*RLANMFRTQSV Trigger: AACACTCTGCGTCCTGAACATGTTGGCAAGTCTTCAATGGGACCAGGATGGGGTTAGAGAGTGTCTTAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | ATGAATACTTGTCTCCAAGGTTCCGGGGAGAAGTCCTaGTCAGAAAGGAGATGTGTGTGGAGTGACCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MNTCLQGSGEKS*SERRCVWSDQR Trigger: CCTTTGGTCACTCCACACACATCTCCTTTCTGACCAGGACTTCTCCCCGGAACCTTGGAGACAAGTATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCAACGAAAATAACTTCATGGTTGGGGATCACCACAGCATGAGCAACTGTAGTCACTGTGGAGCTTaGTCCAACCCTGGACACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSNENNFMVGDHHSMSNCSHCGA*SNPGHS Trigger: GGAGTGTCCAGGGTTGGACAAAGCTCCACAGTGACT...ACAGTTGCTCATGCTGTGGTGATCCCCAACCATGAAGTTATTTTCGTTGCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | ACTTTGAGGAGCCTATGGTATGCTGCTGAGAGAAGTTaGAACCTCGTTGCTAAATTGAAGGGGCAAGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLRSLWYAAERS*NLVAKLKGQGQ Trigger: TTGCCCTTGCCCCTTCAATTTAGCAACGAGGTTCCAACTTCTCTCAGCAGCATACCATAGGCTCCTCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCCTTAGATATATGGCATAGCTTTCTCCTGGAGGTAAAGAAACATTCCACGTGCAGTGGAATCTaGGCCAGTGTGGGCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: FCSLDIWHSFLLEVKKHSTCSGI*ASVGHR Trigger: TCTGTGGCCCACACTGGCCAAGATTCCACTGCACGT...GGAATGTTTCTTTACCTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAGACAGAAGCCAGGAAGGCTTCCTACATGCTAAGTAAGTTCTCTACTACCCTAGTGCTTGCTCCATaGCAGAGCCTTCTCATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LKTEARKASYMLSKFSTTLVLAP*QSLLMN Trigger: ATTCATGAGAAGGCTCTGCAATGGAGCAAGCACTAG...GGTAGTAGAGAACTTACTTAGCATGTAGGAAGCCTTCCTGGCTTCTGTCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCCTTAGATATATGGCATAGCTTTCTCCTGGAGGTAAAGAAACATTCCAACCTCGTTGCTAAATaGAAGGGGCAAGGGCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FCSLDIWHSFLLEVKKHSNLVAK*KGQGQA Trigger: GGCTTGCCCTTGCCCCTTCAATTTAGCAACGAGGTT...GGAATGTTTCTTTACCTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR GCA 72 bp | AACTCACTTGGGCTTCCTGAATCTTTTCAGCCCTTCTaGTCCTTAGATATATGGCATAGCTTTCTCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NSLGLPESFQPF*SLDIWHSFLLE Trigger: CTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAAGGGCTGAAAAGATTCAGGAAGCCCAAGTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | AATCTACATTTTGCCATGTGGCTGGTTACCTGTGTTTaGGTACCACACATCAGTCTCCTCATGTCTTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: NLHFAMWLVTCV*VPHISLLMSYQ Trigger: CTGGTAAGACATGAGGAGACTGATGTGTGGTACCCAAACACAGGTAACCAGCCACATGGCAAAATGTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCCTTAGATATATGGCATAGCTTTCTCCTGGAGGTAAAGAAACATTCCCCTTCTCATGAATACTaGTCTCCAAGGTTCCGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FCSLDIWHSFLLEVKKHSPSHEY*SPRFRG Trigger: TCCCCGGAACCTTGGAGACAAGTATTCATGAGAAGG...GGAATGTTTCTTTACCTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | GAGCTTCGGGTCACGTTATCAGACAGGAAGTATGTTTaGGTTTTGGAAAGAGCTGTCACTATATTAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ELRVTLSDRKYV*VLERAVTILSL Trigger: GAGGCTTAATATAGTGACAGCTCTTTCCAAAACCCAAACATACTTCCTGTCTGATAACGTGACCCGAAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCCTTAGATATATGGCATAGCTTTCTCCTGGAGGTAAAGAAACATTCCAAGTCCAGTGCTACTTaGAGGAGCCTATGGTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: FCSLDIWHSFLLEVKKHSKSSAT*RSLWYA Trigger: AGCATACCATAGGCTCCTCAAAGTAGCACTGGACTT...GGAATGTTTCTTTACCTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CCA 72 bp | CCTGAATCTTTTCAGCCCTTCTGCTCCTTAGATATATaGCATAGCTTTCTCCTGGAGGTAAAGAAACATTCC | + |
|
Preference number: 3 (lower is better) Translates to: PESFQPFCSLDI*HSFLLEVKKHS Trigger: GGAATGTTTCTTTACCTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAAGGGCTGAAAAGATTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCCTTAGATATATGGCATAGCTTTCTCCTGGAGGTAAAGAAACATTCCAGACAGGAAGTATGTTaGGGTTTTGGAAAGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FCSLDIWHSFLLEVKKHSRQEVC*GFGKSC Trigger: ACAGCTCTTTCCAAAACCCAAACATACTTCCTGTCT...GGAATGTTTCTTTACCTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCCTTAGATATATGGCATAGCTTTCTCCTGGAGGTAAAGAAACATTCCCAAACAAAAACCCCCTaGTTCTTTAACTGTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FCSLDIWHSFLLEVKKHSQTKTP*FFNCSL Trigger: CAGAGAACAGTTAAAGAACAAGGGGGTTTTTGTTTG...GGAATGTTTCTTTACCTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR TCA 72 bp | AGCCGTAGGCCACACATAGGCTTTTTAATTGACAGGTaGCGCATCCATACAATACATACAATATTCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SRRPHIGFLIDR*RIHTIHTIFSL Trigger: TAGAGAGAATATTGTATGTATTGTATGGATGCGTCACCTGTCAATTAAAAAGCCTATGTGTGGCCTACGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACCACTGAGCTCTCTCTCTAACCCTAGGCAATTAAAAATTTGTAACAGAAATAAGTATGTTTGGGTTTaGGAAAGAGCTGTCACTATA | + |
|
Preference number: 3 (lower is better) Translates to: LPLSSLSNPRQLKICNRNKYVWV*ERAVTI Trigger: TATAGTGACAGCTCTTTCCAAAACCCAAACATACTT...ATTTCTGTTACAAATTTTTAATTGCCTAGGGTTAGAGAGAGAGCTCAGTGGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | ACACCTGGCTGCCATTGCTCCTTCCCTAGCACTGCCTaGGCAGATGTGCTGTGGTTGGGGCCACGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGCHCSFPSTA*ADVLWLGPRQK Trigger: CTTCTGGCGTGGCCCCAACCACAGCACATCTGCCAAGGCAGTGCTAGGGAAGGAGCAATGGCAGCCAGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGCTTCTTCCTGCAGCTCCAGGCCCTCGGATGGAACTGGGGGCCGAAAACACAACACCAGTTCTGCTaGCCGAGAGCTTTGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGFFLQLQALGWNWGPKTQHQFC*PRALSA Trigger: TGCCGACAAAGCTCTCGGGCAGCAGAACTGGTGTTG...TGTTTTCGGCCCCCAGTTCCATCCGAGGGCCTGGAGCTGCAGGAAGAAGCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGTGGTTGGGGCCACGCCAGAAGACTCAGAGGAAAGTCATGATGGCAAAGTGAGGGCGTCCCAGTaGCAGAAGCACACCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CAVVGATPEDSEESHDGKVRASQ*QKHTHH Trigger: GTGGTGGGTGTGCTTCTGTCACTGGGACGCCCTCAC...TTTGCCATCATGACTTTCCTCTGAGTCTTCTGGCGTGGCCCCAACCACAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | ACACGACTTCCAAATAAGGCACACCCACACCCACACGAGGTCCTTCCCGATGAAAGGAACAGTGCCCAGTaGGGCAGGTGCAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRLPNKAHPHPHEVLPDERNSAQ*GRCRLL Trigger: CAGCAGCCTGCACCTGCCCCACTGGGCACTGTTCCT...TTCATCGGGAAGGACCTCGTGTGGGTGTGGGTGTGCCTTATTTGGAAGTCGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | CCAGGACCCCACTTGGAAGACAGAGGTTACCTTCCATaGGGTGGTTCACCCACTCACTTGCCAGTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGPHLEDRGYLP*GGSPTHLPVAG Trigger: CCCAGCCACTGGCAAGTGAGTGGGTGAACCACCCAATGGAAGGTAACCTCTGTCTTCCAAGTGGGGTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | TCCTTCCCTAGCACTGCCTTGGCAGATGTGCTGTGGTaGGGGCCACGCCAGAAGACTCAGAGGAAAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SFPSTALADVLW*GPRQKTQRKVM Trigger: CATGACTTTCCTCTGAGTCTTCTGGCGTGGCCCCAACCACAGCACATCTGCCAAGGCAGTGCTAGGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGGGAGCAACGTGGTCATaGCTAGATAGTGGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPVLATCLSPKPFWLCEMGATWS*LDSGQL Trigger: GAGCTGGCCACTATCTAGCCATGACCACGTTGCTCC...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | ACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTGGCTCTATCCCATTCCAATCCACGGGATaGAGGAGCTGCTGGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: THQSPHVLPGDLLPGSIPFQSTG*RSCWVF Trigger: GAAGACCCAGCAGCTCCTCCATCCCGTGGATTGGAA...TGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | ACACATCAGTCTCCTCATGTCTTACCAGGCGACCTCCTGCCTGGCTCTATCCCACTTGCCTGCTGCCCTTaGCTTCCTCCTGTGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: THQSPHVLPGDLLPGSIPLACCP*LPPVQS Trigger: ACTTTGCACAGGAGGAAGCCAAGGGCAGCAGGCAAG...TGGGATAGAGCCAGGCAGGAGGTCGCCTGGTAAGACATGAGGAGACTGATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | CCCATTGTGGGTGGTGCCAACCTTGGGCTGGTAGTCTaGGCTTCTTTAAGAGAGCAGGCTGAGAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIVGGANLGLVV*ASLREQAEKAR Trigger: CCTGGCTTTCTCAGCCTGCTCTCTTAAAGAAGCCAAGACTACCAGCCCAAGGTTGGCACCACCCACAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | CACAAGCTGTTGTTACCACAGAGAAAGGAGCCTCCCTaGAGGAAACGCCTCCATGAGATCCAGCTGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKLLLPQRKEPP*RKRLHEIQLWG Trigger: GCCCCACAGCTGGATCTCATGGAGGCGTTTCCTCAAGGGAGGCTCCTTTCTCTGTGGTAACAACAGCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGAGGGACGATGAGAGCTaGTGGCAGACTACAAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VPVLATCLSPKPFWLCEMRDDES*WQTTKT Trigger: CGTCTTTGTAGTCTGCCATCAGCTCTCATCGTCCCT...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGTGGTTGGGGCCACGCCAGAAGACTCAGAGGAAAGTCATGATGGCAAAAGTCCAGGTCAAAAATaGTCTCCGCCAAGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CAVVGATPEDSEESHDGKSPGQK*SPPSRG Trigger: GCCACGGCTTGGCGGAGAGCATTTTTGACCTGGACT...TTTGCCATCATGACTTTCCTCTGAGTCTTCTGGCGTGGCCCCAACCACAGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR GCA 90 bp | ATACGTAAAGAGTCACTGTGGAGCTTTGTCCAACCCTGGACACTCCCCAGTCGGACGGGATGGAGGAGCTaGTGGGTCTTCTTGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRKESLWSFVQPWTLPSRTGWRS*WVFLCV Trigger: GACACACAAGAAGACCCAGCAGCTCCTCCATCCCGT...CCGACTGGGGAGTGTCCAGGGTTGGACAAAGCTCCACAGTGACTCTTTACGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | TGTCCCCATCCATACGTAAAGAGTCACTGTGGAGCTTaGTCCAACCCTGGACACTCCCCAGTCGGCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: CPHPYVKSHCGA*SNPGHSPVGIM Trigger: CATGATGCCGACTGGGGAGTGTCCAGGGTTGGACAAAGCTCCACAGTGACTCTTTACGTATGGATGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCAACGAAAATAACTTCATGGTTGGGGATCACCACAGCATGAGCAACTGTCAGGGCCCACAGGCCTaGAGTTGTGCTCTGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSNENNFMVGDHHSMSNCQGPQA*SCALDA Trigger: GGCGTCCAGAGCACAACTGCAGGCCTGTGGGCCCTG...ACAGTTGCTCATGCTGTGGTGATCCCCAACCATGAAGTTATTTTCGTTGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR GCA 90 bp | ACACGACTTCCAAATAAGGCACACCCACACCCACACGAGGTCCTTCCCGATGAACTTGGCTTCCTCCTGTaGAAAGTTCCAATCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLPNKAHPHPHEVLPDELGFLL*KVPIHG Trigger: CCCGTGGATTGGAACTTTGCACAGGAGGAAGCCAAG...TTCATCGGGAAGGACCTCGTGTGGGTGTGGGTGTGCCTTATTTGGAAGTCGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGTCTCTAGGAGCAACGTaGTCATGGCTAGATAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPVLATCLSPKPFWLCEMSLGAT*SWLDSG Trigger: GCCACTATCTAGCCATGACCACGTTGCTCCTAGAGA...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCTGTACTGGCTACCTGTCTCTCCCCAAAGCCCTTCTGGCTGTGTGAGATGACCACATGTGGTAGGTaGGGATCATTCGACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPVLATCLSPKPFWLCEMTTCGR*GSFDSE Trigger: TTCACTGTCGAATGATCCTCACCTACCACATGTGGT...CATCTCACACAGCCAGAAGGGCTTTGGGGAGAGACAGGTAGCCAGTACAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | ACACGACTTCCAAATAAGGCACACCCACACCCACACGAGGTCCTTCCCGATGAATCATTAGCCACTGGTTaGCCTTCCAGAACAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRLPNKAHPHPHEVLPDESLATG*PSRTGS Trigger: ACTCCCTGTTCTGGAAGGCCAACCAGTGGCTAATGA...TTCATCGGGAAGGACCTCGTGTGGGTGTGGGTGTGCCTTATTTGGAAGTCGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | AGTCATGATGGCAAAGACCTCTTCCAGGCACGTCGAGGCCCCAGCAATACTTCATGGATCATTAGCCACTaGTTGGCCTTCCAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHDGKDLFQARRGPSNTSWIISH*LAFQNR Trigger: CCTGTTCTGGAAGGCCAACCAGTGGCTAATGATCCA...TGAAGTATTGCTGGGGCCTCGACGTGCCTGGAAGAGGTCTTTGCCATCATGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | CCGACTAAGACACTCTCTAACCCCATCCTGGTCCCATaGAAGACTTGCCAACATGTTCAGGACGCAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTKTLSNPILVP*KTCQHVQDAEC Trigger: ACACTCTGCGTCCTGAACATGTTGGCAAGTCTTCAATGGGACCAGGATGGGGTTAGAGAGTGTCTTAGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | AGTGCTTGCTCCATTGCAGAGCCTTCTCATGAATACTaGTCTCCAAGGTTCCGGGGAGAAGTCCTGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SACSIAEPSHEY*SPRFRGEVLVR Trigger: TCTGACCAGGACTTCTCCCCGGAACCTTGGAGACAAGTATTCATGAGAAGGCTCTGCAATGGAGCAAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | TATGCTGCTGAGAGAAGTTGGAACCTCGTTGCTAAATaGAAGGGGCAAGGGCAAGCCATCGGGAAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YAAERSWNLVAK*KGQGQAIGKRA Trigger: TGCCCTTTTCCCGATGGCTTGCCCTTGCCCCTTCAATTTAGCAACGAGGTTCCAACTTCTCTCAGCAGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR GCA 90 bp | GTCGAGGCCCCAGCAATACTTCATGGGTACTTTAGAATTCATAGTAAGGAACAACCCGAAAAGGAACAGTaGCCAGTGGGGCAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEAPAILHGYFRIHSKEQPEKEQ*PVGQVQ Trigger: CTGCACCTGCCCCACTGGGCACTGTTCCTTTTCGGG...TTGTTCCTTACTATGAATTCTAAAGTACCCATGAAGTATTGCTGGGGCCTCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGACAGAAGCCAGGAAGGCTTCCTACATGCTAAGTAAGTTCTCTACTACCTGGTCCTTTCTTGCCTaGTGCCCTTGGCTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKTEARKASYMLSKFSTTWSFLA*CPWLPP Trigger: AGGAGGAAGCCAAGGGCAGCAGGCAAGAAAGGACCA...GGTAGTAGAGAACTTACTTAGCATGTAGGAAGCCTTCCTGGCTTCTGTCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGCAACGAAAATAACTTCATGGTTGGGGATCACCACAGCATGAGCAACTGTAGAAGACCTTCTCTTTaGCCGCCAGGGAGCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSNENNFMVGDHHSMSNCRRPSL*PPGSGR Trigger: CCTACCGCTCCCTGGCGGCCAAAGAGAAGGTCTTCT...ACAGTTGCTCATGCTGTGGTGATCCCCAACCATGAAGTTATTTTCGTTGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTTAGTTCCCATCAGGAGGGTCACCACAGGCTGTGTGAACAGAGACTTATTTTTCCGAGGCACCTaGCCATTGGTCCTTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCLVPIRRVTTGCVNRDLFFRGT*PLVLSC Trigger: GCAAGAAAGGACCAATGGCCAGGTGCCTCGGAAAAA...TAAGTCTCTGTTCACACAGCCTGTGGTGACCCTCCTGATGGGAACTAAGCATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | AGCCACTACTCTAGGCAGGGACTAGTGCTTGCTCCATaGCAGAGCCTTCTCATGAATACTTGTCTCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHYSRQGLVLAP*QSLLMNTCLQG Trigger: ACCTTGGAGACAAGTATTCATGAGAAGGCTCTGCAATGGAGCAAGCACTAGTCCCTGCCTAGAGTAGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTCTGTGGCTGGAGCCTGAGGACTAGTGTATACAATACAAACATTTACCACGTGGCCGTGGTGATGTaGAACCAACACCAGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WFCGWSLRTSVYNTNIYHVAVVM*NQHQFC Trigger: GCAGAACTGGTGTTGGTTTCACATCACCACGGCCAC...GTGGTAAATGTTTGTATTGTATACACTAGTCCTCAGGCTCCAGCCACAGAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | TGTTCTCTGGGAAAGTTTTTGTGTCTGCCGATAGCATaGCTAGCCGGTGTCTGGAGGTCTAACCTGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLGKFLCLPIA*LAGVWRSNLQT Trigger: TGTTTGCAGGTTAGACCTCCAGACACCGGCTAGCAATGCTATCGGCAGACACAAAAACTTTCCCAGAGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | ACCCCCTTGTTCTTTAACTGTTCTCTGGGAAAGTTTTaGTGTCTGCCGATAGCATTGCTAGCCGGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLFFNCSLGKF*CLPIALLAGVW Trigger: CCAGACACCGGCTAGCAATGCTATCGGCAGACACAAAAACTTTCCCAGAGAACAGTTAAAGAACAAGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTCCTTAGATATATGGCATAGCTTTCTCCTGGAGGTAAAGAAACATTCCGAGGCACCTGGCCATTaGTCCTTTCTTGCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCSLDIWHSFLLEVKKHSEAPGH*SFLACC Trigger: GCAGCAGGCAAGAAAGGACCAATGGCCAGGTGCCTC...GGAATGTTTCTTTACCTCCAGGAGAAAGCTATGCCATATATCTAAGGAGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTCTGTGGCTGGAGCCTGAGGACTAGTGTATACAATACAAACATTTACCACAACAGGTTGGACAGGTaGACGGCCACATTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WFCGWSLRTSVYNTNIYHNRLDR*TATFSK Trigger: CTTTGAGAATGTGGCCGTTCACCTGTCCAACCTGTT...GTGGTAAATGTTTGTATTGTATACACTAGTCCTCAGGCTCCAGCCACAGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | CCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTaGGGCAGGAATAGAAATGCCCGACTAAGACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLPNLLLGHDV*GRNRNARLRHS Trigger: AGAGTGTCTTAGTCGGGCATTTCTATTCCTGCCCAAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| 3UTR CAA 72 bp | CGGGTCACGTTATCAGACAGGAAGTATGTTTGGGTTTaGGAAAGAGCTGTCACTATATTAAGCCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVTLSDRKYVWV*ERAVTILSLCP Trigger: TGGGCAGAGGCTTAATATAGTGACAGCTCTTTCCAAAACCCAAACATACTTCCTGTCTGATAACGTGACCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTCTGTGGCTGGAGCCTGAGGACTAGTGTATACAATACAAACATTTACCACAGAAAGGCAAAGAGGTaGTGGACAACCAGAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: WFCGWSLRTSVYNTNIYHRKAKR*WTTRNK Trigger: CTTGTTTCTGGTTGTCCACCACCTCTTTGCCTTTCT...GTGGTAAATGTTTGTATTGTATACACTAGTCCTCAGGCTCCAGCCACAGAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS CCA 90 bp | AGCACGGGGTCTCCCAGCAGGGCCCACAGGCCTGCAGTTGTGCTCTaGACGCCGAAGACAGCACGCGTCGCCGCCAGGTTCCAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: STGSPSRAHRPAVVL*TPKTARVAARFQKT Trigger: GGTCTTCTGGAACCTGGCGGCGACGCGTGCTGTCTTCGGCGTCCAGAGCACAACTGCAGGCCTGTGGGCCCTGCTGGGAGACCCCGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS GCA 90 bp | CATAGAGCACGGGGTCTCCCAGCAGGGCCCACAGGCCTGCAGTTGTaGTCTGGACGCCGAAGACAGCACGCGTCGCCGCCAGGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HRARGLPAGPTGLQL*SGRRRQHASPPGSR Trigger: TCTGGAACCTGGCGGCGACGCGTGCTGTCTTCGGCGTCCAGAGCACAACTGCAGGCCTGTGGGCCCTGCTGGGAGACCCCGTGCTCTATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS GCA 90 bp | AGGGTTAATGACGGCCGTGAGCAGGGCCAGCCCGAAAAGGAACAGTaGCCAGTGGGGCAGGTGCAGGCTGCTGGTGAGGGCGTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVNDGREQGQPEKEQ*PVGQVQAAGEGVPV Trigger: CACTGGGACGCCCTCACCAGCAGCCTGCACCTGCCCCACTGGGCACTGTTCCTTTTCGGGCTGGCCCTGCTCACGGCCGTCATTAACCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS CCA 90 bp | CGAAGACAGCACGCGTCGCCGCCAGGTTCCAGAAGACCTTCTCTTTaGCCGCCAGGGAGCGGTAGGTGGCATTCAGGGACGATGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRQHASPPGSRRPSL*PPGSGRWHSGTMRA Trigger: AGCTCTCATCGTCCCTGAATGCCACCTACCGCTCCCTGGCGGCCAAAGAGAAGGTCTTCTGGAACCTGGCGGCGACGCGTGCTGTCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 ENSMUST00000128839.2 |
||
| CDS-3UTR CAA 90 bp | ATACGTAAAGAGTCACTGTGGAGCTTTGTCCAACCCTGGACACTCCCCAGTCGGCCCACAGGCCTGCAGTaGTGCTCTGGACGCCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRKESLWSFVQPWTLPSRPTGLQ*CSGRRR Trigger: TCTTCGGCGTCCAGAGCACAACTGCAGGCCTGTGGG...CCGACTGGGGAGTGTCCAGGGTTGGACAAAGCTCCACAGTGACTCTTTACGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS GCA 90 bp | CTGGCCATTGGTCCTTTCTTGCCTGCTGCCCTTGGCTTCCTCCTGTaGAAAGTTCCAATCCACGGGATGGAGGAGCTGCTGGGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LAIGPFLPAALGFLL*KVPIHGMEELLGLL Trigger: AAGAAGACCCAGCAGCTCCTCCATCCCGTGGATTGGAACTTTGCACAGGAGGAAGCCAAGGGCAGCAGGCAAGAAAGGACCAATGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS CCA 90 bp | TTTTCCGAGGCACCTGGCCATTGGTCCTTTCTTGCCTGCTGCCCTTaGCTTCCTCCTGTGCAAAGTTCCAATCCACGGGATGGAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSEAPGHWSFLACCP*LPPVQSSNPRDGGA Trigger: AGCTCCTCCATCCCGTGGATTGGAACTTTGCACAGGAGGAAGCCAAGGGCAGCAGGCAAGAAAGGACCAATGGCCAGGTGCCTCGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CAA 90 bp | CACACAGGAATGAGGCAATGCTTAGTTCCCATCAGGAGGGTCACCACAGGCTGTCGAGGCACCTGGCCATaGGTCCTTTCTTGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HTGMRQCLVPIRRVTTGCRGTWP*VLSCLL Trigger: CAGCAGGCAAGAAAGGACCAATGGCCAGGTGCCTCG...ACAGCCTGTGGTGACCCTCCTGATGGGAACTAAGCATTGCCTCATTCCTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS TCA 90 bp | CTTCTCTTTGGCCGCCAGGGAGCGGTAGGTGGCATTCAGGGACGATaGGAGCTGATGGCAGACTACAAAGACGCCCAGGTAGAAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLFGRQGAVGGIQGR*ELMADYKDAQVEDK Trigger: TTTGTCTTCTACCTGGGCGTCTTTGTAGTCTGCCATCAGCTCTCATCGTCCCTGAATGCCACCTACCGCTCCCTGGCGGCCAAAGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 ENSMUST00000128839.2 |
||
| CDS-3UTR CAA 90 bp | ATACGTAAAGAGTCACTGTGGAGCTTTGTCCAACCCTGGACACTCCCCAGTCGGTCTTGCCTGCTGCCCTaGGCTTCCTCCTGTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRKESLWSFVQPWTLPSRSCLLP*ASSCAK Trigger: CTTTGCACAGGAGGAAGCCAAGGGCAGCAGGCAAGA...CCGACTGGGGAGTGTCCAGGGTTGGACAAAGCTCCACAGTGACTCTTTACGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS TCA 90 bp | GGTGAACGGCCACATTCTCAAAGAAGAAGAAGCCAGTGGCCGTGGTaGTGTGAAACCAACACCAGTTCTGCTGCCCGAGAGCTTTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GERPHSQRRRSQWPW*CETNTSSAARELCR Trigger: CCGACAAAGCTCTCGGGCAGCAGAACTGGTGTTGGTTTCACATCACCACGGCCACTGGCTTCTTCTTCTTTGAGAATGTGGCCGTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS-3UTR CAA 90 bp | AGTCATGATGGCAAAGACCTCTTCCAGGCACGTCGAGGCCCCAGCAATACTTCATGGCCAGCTCTGAGATaGATCGCTGAACCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SHDGKDLFQARRGPSNTSWPALR*IAEPRN Trigger: GTTCCTGGGTTCAGCGATCAATCTCAGAGCTGGCCA...TGAAGTATTGCTGGGGCCTCGACGTGCCTGGAAGAGGTCTTTGCCATCATGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS TCA 90 bp | ACAACCAGAAACAAGTCAAAGGTGCGGAAGAACAGGTTGGACAGGTaGACGGCCACATTCTCAAAGAAGAAGAAGCCAGTGGCCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TTRNKSKVRKNRLDR*TATFSKKKKPVAVV Trigger: CACCACGGCCACTGGCTTCTTCTTCTTTGAGAATGTGGCCGTTCACCTGTCCAACCTGTTCTTCCGCACCTTTGACTTGTTTCTGGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS CCA 90 bp | GGTGGTGGACAACCAGAAACAAGTCAAAGGTGCGGAAGAACAGGTTaGACAGGTGAACGGCCACATTCTCAAAGAAGAAGAAGCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGGQPETSQRCGRTG*TGERPHSQRRRSQW Trigger: CCACTGGCTTCTTCTTCTTTGAGAATGTGGCCGTTCACCTGTCCAACCTGTTCTTCCGCACCTTTGACTTGTTTCTGGTTGTCCACCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS GCA 90 bp | CAAGAAAGGCAAAGAGGTGGTGGACAACCAGAAACAAGTCAAAGGTaGGGAAGAACAGGTTGGACAGGTGAACGGCCACATTCTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QERQRGGGQPETSQR*GRTGWTGERPHSQR Trigger: TCTTTGAGAATGTGGCCGTTCACCTGTCCAACCTGTTCTTCCGCACCTTTGACTTGTTTCTGGTTGTCCACCACCTCTTTGCCTTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS-3UTR CAA 90 bp | TTACCACTGAGCTCTCTCTCTAACCCTAGGCAATTAAAAATTTGTAACAGAAATGCCATTGGTCCTTTCTaGCCTGCTGCCCTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSSLSNPRQLKICNRNAIGPF*PAALGF Trigger: GAAGCCAAGGGCAGCAGGCAAGAAAGGACCAATGGC...ATTTCTGTTACAAATTTTTAATTGCCTAGGGTTAGAGAGAGAGCTCAGTGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS GCA 72 bp | CGGGGTCTCCCAGCAGGGCCCACAGGCCTGCAGTTGTaGTCTGGACGCCGAAGACAGCACGCGTCGCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RGLPAGPTGLQL*SGRRRQHASPP Trigger: TGGCGGCGACGCGTGCTGTCTTCGGCGTCCAGAGCACAACTGCAGGCCTGTGGGCCCTGCTGGGAGACCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS CAA 72 bp | GCACGGGGTCTCCCAGCAGGGCCCACAGGCCTGCAGTaGTGCTCTGGACGCCGAAGACAGCACGCGTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ARGLPAGPTGLQ*CSGRRRQHASP Trigger: CGGCGACGCGTGCTGTCTTCGGCGTCCAGAGCACAACTGCAGGCCTGTGGGCCCTGCTGGGAGACCCCGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS CAA 90 bp | CGGCATAGAGCACGGGGTCTCCCAGCAGGGCCCACAGGCCTGCAGTaGTGCTCTGGACGCCGAAGACAGCACGCGTCGCCGCCAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RHRARGLPAGPTGLQ*CSGRRRQHASPPGS Trigger: GGAACCTGGCGGCGACGCGTGCTGTCTTCGGCGTCCAGAGCACAACTGCAGGCCTGTGGGCCCTGCTGGGAGACCCCGTGCTCTATGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS CCA 72 bp | TCTCCCAGCAGGGCCCACAGGCCTGCAGTTGTGCTCTaGACGCCGAAGACAGCACGCGTCGCCGCCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPSRAHRPAVVL*TPKTARVAARF Trigger: GAACCTGGCGGCGACGCGTGCTGTCTTCGGCGTCCAGAGCACAACTGCAGGCCTGTGGGCCCTGCTGGGAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS TCA 72 bp | GGCCGCCAGGGAGCGGTAGGTGGCATTCAGGGACGATaGGAGCTGATGGCAGACTACAAAGACGCCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GRQGAVGGIQGR*ELMADYKDAQV Trigger: TACCTGGGCGTCTTTGTAGTCTGCCATCAGCTCTCATCGTCCCTGAATGCCACCTACCGCTCCCTGGCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 ENSMUST00000128839.2 |
||
| CDS TCA 72 bp | ACCACCCAGCCTTCAGGAGCATCCAGGAAATGCAGGTaGAGGGCGTGCTCATCTCTAGGAGCAACGTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TTQPSGASRKCR*RACSSLGATWS Trigger: TGACCACGTTGCTCCTAGAGATGAGCACGCCCTTCACCTGCATTTCCTGGATGCTCCTGAAGGCTGGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS CCA 72 bp | AGAAGACCTTCTCTTTGGCCGCCAGGGAGCGGTAGGTaGCATTCAGGGACGATGAGAGCTGATGGCAGACTA | + |
|
Preference number: 6 (lower is better) Translates to: RRPSLWPPGSGR*HSGTMRADGRL Trigger: TAGTCTGCCATCAGCTCTCATCGTCCCTGAATGCCACCTACCGCTCCCTGGCGGCCAAAGAGAAGGTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 ENSMUST00000128839.2 |
||
| CDS CCA 72 bp | GCACCTGGCCATTGGTCCTTTCTTGCCTGCTGCCCTTaGCTTCCTCCTGTGCAAAGTTCCAATCCACGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: APGHWSFLACCP*LPPVQSSNPRD Trigger: ATCCCGTGGATTGGAACTTTGCACAGGAGGAAGCCAAGGGCAGCAGGCAAGAAAGGACCAATGGCCAGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS GCA 72 bp | ACCGAATCTTCCACGAAGCGTAGTCCAGGTCAAAAATaGTCTCCGCCAAGCCGTGGCTGCTCACAGGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TESSTKRSPGQK*SPPSRGCSQES Trigger: TGACTCCTGTGAGCAGCCACGGCTTGGCGGAGAGCATTTTTGACCTGGACTACGCTTCGTGGAAGATTCGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 ENSMUST00000128839.2 ENSMUST00000133578.2 |
||
| CDS GCA 72 bp | CTCTTTTTCCGAGGCACCTGGCCATTGGTCCTTTCTTaGCTGCTGCCCTTGGCTTCCTCCTGTGCAAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFFRGTWPLVLS*LLPLASSCAKF Trigger: GAACTTTGCACAGGAGGAAGCCAAGGGCAGCAGGCAAGAAAGGACCAATGGCCAGGTGCCTCGGAAAAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS CAA 72 bp | CCTCTTTTTCCGAGGCACCTGGCCATTGGTCCTTTCTaGCCTGCTGCCCTTGGCTTCCTCCTGTGCAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PLFPRHLAIGPF*PAALGFLLCKV Trigger: AACTTTGCACAGGAGGAAGCCAAGGGCAGCAGGCAAGAAAGGACCAATGGCCAGGTGCCTCGGAAAAAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS GCA 72 bp | TTTTCCGAGGCACCTGGCCATTGGTCCTTTCTTGCCTaGTGCCCTTGGCTTCCTCCTGTGCAAAGTTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: FSEAPGHWSFLA*CPWLPPVQSSN Trigger: ATTGGAACTTTGCACAGGAGGAAGCCAAGGGCAGCAGGCAAGAAAGGACCAATGGCCAGGTGCCTCGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS TCA 72 bp | CCACATTCTCAAAGAAGAAGAAGCCAGTGGCCGTGGTaGTGTGAAACCAACACCAGTTCTGCTGCCCGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PHSQRRRSQWPW*CETNTSSAARE Trigger: CTCTCGGGCAGCAGAACTGGTGTTGGTTTCACATCACCACGGCCACTGGCTTCTTCTTCTTTGAGAATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS CCA 72 bp | TTCGACAGTGAAACATGTGGATCATTAGCCACTGGTTaGCCTTCCAGAACAGGGAGTCTGACCACCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FDSETCGSLATG*PSRTGSLTTQP Trigger: AGGCTGGGTGGTCAGACTCCCTGTTCTGGAAGGCCAACCAGTGGCTAATGATCCACATGTTTCACTGTCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS TCA 72 bp | TTCTCAAAGAAGAAGAAGCCAGTGGCCGTGGTGATGTaGAACCAACACCAGTTCTGCTGCCCGAGAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSKKKKPVAVVM*NQHQFCCPRAL Trigger: CAAAGCTCTCGGGCAGCAGAACTGGTGTTGGTTTCACATCACCACGGCCACTGGCTTCTTCTTCTTTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027554.8 ENSMUST00000123990.2 |
||
| CDS TCA 72 bp | AACAAGTCAAAGGTGCGGAAGAACAGGTTGGACAGGTaGACGGCCACATTCTCAAAGAAGAAGAAGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: NKSKVRKNRLDR*TATFSKKKKPV Trigger: CACTGGCTTCTTCTTCTTTGAGAATGTGGCCGTTCACCTGTCCAACCTGTTCTTCCGCACCTTTGACTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
||
| CDS CCA 72 bp | CAACCAGAAACAAGTCAAAGGTGCGGAAGAACAGGTTaGACAGGTGAACGGCCACATTCTCAAAGAAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPETSQRCGRTG*TGERPHSQRRR Trigger: TCTTCTTCTTTGAGAATGTGGCCGTTCACCTGTCCAACCTGTTCTTCCGCACCTTTGACTTGTTTCTGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027554.8 |
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