Pregenerated sensors for CLN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030720Ensembl transcript IDs: ENSMUST00000032962.11, ENSMUST00000084589.11, ENSMUST00000098036.9, ENSMUST00000116269.9, ENSMUST00000125508.8, ENSMUST00000128970.8, ENSMUST00000147086.2, ENSMUST00000150311.8, ENSMUST00000150587.8, ENSMUST00000150917.8
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTaGAGTGGGGCAGGGAAAGGCTGTGGCAGAGCTCGAAGATGTGTG | + |
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Preference number: 1 (lower is better) Translates to: TLRPAQEWETSGAPC*SGAGKGCGRARRCV Trigger: CACACATCTTCGAGCTCTGCCACAGCCTTTCCCTGCCCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| 3UTR CCA 90 bp | GAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTaGGGCAGGGAAAGGCTGTGGCAGAGCTCGAAGATGTGTGATCTG | + |
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Preference number: 1 (lower is better) Translates to: EASSGVGNIRGSLLQ*GRERLWQSSKMCDL Trigger: CAGATCACACATCTTCGAGCTCTGCCACAGCCTTTCCCTGCCCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| 3UTR TCA 90 bp | GCTGCAGTGGGGCAGGGAAAGGCTGTGGCAGAGCTCGAAGATGTGTaGTCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCC | + |
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Preference number: 1 (lower is better) Translates to: AAVGQGKAVAELEDV*SAHVPADQCVSSNS Trigger: GGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCACAGCCTTTCCCTGCCCCACTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| 3UTR CCA 90 bp | GGAAACATCAGGGGCTCCTTGCTGCAGTGGGGCAGGGAAAGGCTGTaGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATC | + |
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Preference number: 1 (lower is better) Translates to: GNIRGSLLQWGRERL*QSSKMCDLLMCLQI Trigger: GATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCACAGCCTTTCCCTGCCCCACTGCAGCAAGGAGCCCCTGATGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| 3UTR CCA 90 bp | CAAGGGTGGGAAGGATGTCTGCTAGGAGCACCGCAGCTGTGGAGATaGAGTTGCAGTCAAATCGAGATGAGCTGTTGTGGGGTGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: QGWEGCLLGAPQLWR*SCSQIEMSCCGVWV Trigger: CACCCACACCCCACAACAGCTCATCTCGATTTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCCTAGCAGACATCCTTCCCACCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR CCA 90 bp | GCCAGGCTGACCTTGGTTTCCTATGTAGCTGAGGACCATGAACTCTaGATCCTCCTGTCTCTACCTCCCCAATCCTGGGACTACAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: ARLTLVSYVAEDHEL*ILLSLPPQSWDYRL Trigger: AAGCCTGTAGTCCCAGGATTGGGGAGGTAGAGACAGGAGGATCCAGAGTTCATGGTCCTCAGCTACATAGGAAACCAAGGTCAGCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR TCA 90 bp | GAGATGCTGGCCAAAACCACTCCACACAGGCTTAACCCCACTGACTaGGAGAAGGCAACCAGAACAAAGCTCCCAGCAGAACAAACTCCA | + |
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Preference number: 1 (lower is better) Translates to: EMLAKTTPHRLNPTD*EKATRTKLPAEQTP Trigger: TGGAGTTTGTTCTGCTGGGAGCTTTGTTCTGGTTGCCTTCTCTCAGTCAGTGGGGTTAAGCCTGTGTGGAGTGGTTTTGGCCAGCATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR TCA 90 bp | TATAGCCCTAGTCCTCAGGGTCTCACCGTATATCCCAGTCAGACGTaGACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: YSPSPQGLTVYPSQT*TWILQSAECWNYRC Trigger: ACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGTTCACGTCTGACTGGGATATACGGTGAGACCCTGAGGACTAGGGCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR TCA 90 bp | CACCGTATATCCCAGTCAGACGTGAACTTGGATTCTCCAGTCTGCTaGGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATAC | + |
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Preference number: 1 (lower is better) Translates to: HRISQSDVNLDSPVC*VLELQVCATPCLKY Trigger: GTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGTTCACGTCTGACTGGGATATACGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR TCA 90 bp | TTAGTGCCTGAACTATTGGTGTTCTGTTCAGGAAGTTGTCTCCTGTaGCATTCGTTCAGGGCTACTACCCACTTCGTCTTCTATGAATAT | + |
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Preference number: 1 (lower is better) Translates to: LVPELLVFCSGSCLL*HSFRATTHFVFYEY Trigger: ATATTCATAGAAGACGAAGTGGGTAGTAGCCCTGAACGAATGTCACAGGAGACAACTTCCTGAACAGAACACCAATAGTTCAGGCACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084589.11 |
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| 3UTR CCA 90 bp | TTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTATTaGCATAAAAACAGACAAGTTGATCAATGGAATCGAAGACCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: FKHYYRVIVIKPTQY*HKNRQVDQWNRRPR Trigger: TCTGGGTCTTCGATTCCATTGATCAACTTGTCTGTTTTTATGCCAATACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR CCA 90 bp | AGAACAAACTCCACTGACGAGCACCCGGGGGCTGTAAGGCAGCAAGTGAAGGCCGTGGGGTGTGGGTGTTaGGCCTGGTTCCACCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RTNSTDEHPGAVRQQVKAVGCGC*AWFHPA Trigger: GGCTGGGTGGAACCAGGCCCAACACCCACACCCCAC...GGCCTTCACTTGCTGCCTTACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR CAA 90 bp | ACCGCAGCTGTGGAGATGGAGTTGCAGTCAAATCGAGATGAGCTGTaGTGGGGTGTGGGTGTTGGGCCTGGTTCCACCCAGCCAGTTATG | + |
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Preference number: 2 (lower is better) Translates to: TAAVEMELQSNRDEL*WGVGVGPGSTQPVM Trigger: CATAACTGGCTGGGTGGAACCAGGCCCAACACCCACACCCCACAACAGCTCATCTCGATTTGACTGCAACTCCATCTCCACAGCTGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR CAA 90 bp | GTGGGAAGGATGTCTGCTAGGAGCACCGCAGCTGTGGAGATGGAGTaGCAGTCAAATCGAGATGAGCTGTTGTGGGGTGTGGGTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: VGRMSARSTAAVEME*QSNRDELLWGVGVG Trigger: CCCAACACCCACACCCCACAACAGCTCATCTCGATTTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCCTAGCAGACATCCTTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGCCCTGAGGAGATGCTGGCCAAAACCACTCCACACAGGCTTAACCCCACTGCAGTCAAATCGAGATaGGCTGTTGTGGGGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PSPEEMLAKTTPHRLNPTAVKSR*AVVGCG Trigger: CCCACACCCCACAACAGCTCATCTCGATTTGACTGC...AGTGGGGTTAAGCCTGTGTGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGATCTGCTCATGTGCCTaGAGATCAGTGTGTGTCGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLRPAQEWETSGAPCCSGICSCA*RSVCVE Trigger: CTCGACACACACTGATCTGCAGGCACATGAGCAGAT...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGCTCCCAGCAGAACAAACTCCACTGACGAGCACCCGGGGGCTGTAAGGGGAGCACCGCAGCTGTaGAGATGGAGTTGCAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: NKAPSRTNSTDEHPGAVRGAPQL*RWSCSQ Trigger: TTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCC...CCTTACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTGCTGGGAGCTTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCAGGCCAGCTCAGGAGTaGGAAACATCAGGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SWASTLPLNYSPSPQGLTRPAQE*ETSGAP Trigger: AGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCT...GGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGCTCCCAGCAGAACAAACTCCACTGACGAGCACCCGGGGGCTGTAAGGCCGCAGCTGTGGAGATaGAGTTGCAGTCAAATCGAG | + |
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Preference number: 2 (lower is better) Translates to: NKAPSRTNSTDEHPGAVRPQLWR*SCSQIE Trigger: CTCGATTTGACTGCAACTCCATCTCCACAGCTGCGG...CCTTACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTGCTGGGAGCTTTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR CAA 90 bp | TGGAGTTGCAGTCAAATCGAGATGAGCTGTTGTGGGGTGTGGGTGTaGGGCCTGGTTCCACCCAGCCAGTTATGTGAGTTCACCAACCTG | + |
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Preference number: 2 (lower is better) Translates to: WSCSQIEMSCCGVWV*GLVPPSQLCEFTNL Trigger: CAGGTTGGTGAACTCACATAACTGGCTGGGTGGAACCAGGCCCAACACCCACACCCCACAACAGCTCATCTCGATTTGACTGCAACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGGGTAGGAGAAAACTCTaGGGCCAGCTCAGGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LGFSSLLSAGITGVCHTLGRRKL*GQLRSG Trigger: CCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACC...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGGTAGGAGAAAACTCTaGGGCCAGCTCAGGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TWILQSAECWNYRCVPHLGRRKL*GQLRSG Trigger: CCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACC...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTAGGCCAGCTCAGGAGTaGGAAACATCAGGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TWILQSAECWNYRCVPHLRPAQE*ETSGAP Trigger: AGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCT...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATGGTAGGAGAAAACTCTaGGGCCAGCTCAGGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYGRRKL*GQLRSG Trigger: CCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACC...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGATCTGCTCATGTGCCTaGAGATCAGTGTGTGTCGAG | + |
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Preference number: 2 (lower is better) Translates to: LGFSSLLSAGITGVCHTLICSCA*RSVCVE Trigger: CTCGACACACACTGATCTGCAGGCACATGAGCAGAT...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACATCAGGGGCTCCTTGCTaGAGTGGGGCAGGGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSAGITGVCHTLSEILYTSGAPC*SGAGKG Trigger: GCCTTTCCCTGCCCCACTGCAGCAAGGAGCCCCTGA...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR GCA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACATCTGCTCATGTGCCTaGAGATCAGTGTGTGTCGAG | + |
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Preference number: 2 (lower is better) Translates to: LNCFPGIKLRAQDILGKYICSCA*RSVCVE Trigger: CTCGACACACACTGATCTGCAGGCACATGAGCAGAT...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR CCA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACCAGTCTGCTGAGTGCTaGAATTACAGGTGTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LNCFPGIKLRAQDILGKYQSAEC*NYRCVP Trigger: TGGCACACACCTGTAATTCCAGCACTCAGCAGACTG...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR CCA 90 bp | CATATATCTTTCACAGTGGGCTTATGTAAACTTTCCGTTTCAGAGACTGCACAAAGGCCAGCTCAGGAGTaGGAAACATCAGGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HISFTVGLCKLSVSETAQRPAQE*ETSGAP Trigger: AGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCT...TTGTGCAGTCTCTGAAACGGAAAGTTTACATAAGCCCACTGTGAAAGATATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTTCCGTTTCAGAGACTaGACAAAAAGGAAACTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LGFSSLLSAGITGVCHTLFRFRD*TKRKLL Trigger: TAACAGTTTCCTTTTTGTGCAGTCTCTGAAACGGAA...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATGTGCCACACCTTGTCTaGAATACTTTATACATTCAT | + |
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Preference number: 2 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYVPHLV*NTLYIH Trigger: ATGAATGTATAAAGTATTTCAGACAAGGTGTGGCAC...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR GCA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTAATCTGCTCATGTGCCTaGAGATCAGTGTGTGTCGAG | + |
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Preference number: 2 (lower is better) Translates to: PSLFQALLQSYSNKTHTVICSCA*RSVCVE Trigger: CTCGACACACACTGATCTGCAGGCACATGAGCAGAT...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACATTCCGTTTCAGAGACTaGACAAAAAGGAAACTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LSAGITGVCHTLSEILYTFRFRD*TKRKLL Trigger: TAACAGTTTCCTTTTTGTGCAGTCTCTGAAACGGAA...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR-3UTR CCA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTAATATATCTTTCACAGTaGGCTTATGTAAACTTTCCG | + |
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Preference number: 2 (lower is better) Translates to: PSLFQALLQSYSNKTHTVIYLSQ*AYVNFP Trigger: CGGAAAGTTTACATAAGCCCACTGTGAAAGATATAT...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR TCA 72 bp | CAGCACTGGGGTAGAAGGCAGTCAGTGAGAGGAAGGTaGCCTCCCCTAGCCCTGAGGAGATGCTGGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: QHWGRRQSVRGR*PPLALRRCWPK Trigger: TTTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGTCACCTTCCTCTCACTGACTGCCTTCTACCCCAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR-3UTR CAA 90 bp | AACAAAGCTCCCAGCAGAACAAACTCCACTGACGAGCACCCGGGGGCTGTAAGGAATCGAGATGAGCTGTaGTGGGGTGTGGGTGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: NKAPSRTNSTDEHPGAVRNRDEL*WGVGVG Trigger: CCCAACACCCACACCCCACAACAGCTCATCTCGATT...CCTTACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTGCTGGGAGCTTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR TCA 72 bp | GGGCAGGGAAAGGCTGTGGCAGAGCTCGAAGATGTGTaGTCTGCTCATGTGCCTGCAGATCAGTGTGTGTCG | + |
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Preference number: 3 (lower is better) Translates to: GQGKAVAELEDV*SAHVPADQCVS Trigger: CGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCACAGCCTTTCCCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| 3UTR-3UTR CAA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGAACATCAGGGGCTCCTaGCTGCAGTGGGGCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LGFSSLLSAGITGVCHTLNIRGS*LQWGRE Trigger: TTCCCTGCCCCACTGCAGCAAGGAGCCCCTGATGTT...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR TCA 72 bp | CAACCAGAACAAAGCTCCCAGCAGAACAAACTCCACTaGCGAGCACCCGGGGGCTGTAAGGCAGCAAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: QPEQSSQQNKLH*RAPGGCKAASE Trigger: TTCACTTGCTGCCTTACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTGCTGGGAGCTTTGTTCTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR GCA 72 bp | TGTCTGCTAGGAGCACCGCAGCTGTGGAGATGGAGTTaGAGTCAAATCGAGATGAGCTGTTGTGGGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: CLLGAPQLWRWS*SQIEMSCCGVW Trigger: CCACACCCCACAACAGCTCATCTCGATTTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCCTAGCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| 3UTR-3UTR CAA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTAACATCAGGGGCTCCTaGCTGCAGTGGGGCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: TWILQSAECWNYRCVPHLNIRGS*LQWGRE Trigger: TTCCCTGCCCCACTGCAGCAAGGAGCCCCTGATGTT...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| 3UTR GCA 72 bp | GGGAAAGGCTGTGGCAGAGCTCGAAGATGTGTGATCTaGTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GKGCGRARRCVI*SCACRSVCVEQ Trigger: TTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCACAGCCTTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| 3UTR CCA 72 bp | GAAGGATGTCTGCTAGGAGCACCGCAGCTGTGGAGATaGAGTTGCAGTCAAATCGAGATGAGCTGTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EGCLLGAPQLWR*SCSQIEMSCCG Trigger: CCCACAACAGCTCATCTCGATTTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCCTAGCAGACATCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| 3UTR TCA 72 bp | GCCAAAACCACTCCACACAGGCTTAACCCCACTGACTaGGAGAAGGCAACCAGAACAAAGCTCCCAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AKTTPHRLNPTD*EKATRTKLPAE Trigger: TTCTGCTGGGAGCTTTGTTCTGGTTGCCTTCTCTCAGTCAGTGGGGTTAAGCCTGTGTGGAGTGGTTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACAACATCAGGGGCTCCTaGCTGCAGTGGGGCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LNCFPGIKLRAQDILGKYNIRGS*LQWGRE Trigger: TTCCCTGCCCCACTGCAGCAAGGAGCCCCTGATGTT...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| 3UTR CCA 72 bp | GAACTCTGGATCCTCCTGTCTCTACCTCCCCAATCCTaGGACTACAGGCTTATATTAGCATACGCTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ELWILLSLPPQS*DYRLILAYAAF Trigger: AAAAGCAGCGTATGCTAATATAAGCCTGTAGTCCCAGGATTGGGGAGGTAGAGACAGGAGGATCCAGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| 3UTR TCA 72 bp | GAACTATTGGTGTTCTGTTCAGGAAGTTGTCTCCTGTaGCATTCGTTCAGGGCTACTACCCACTTCGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ELLVFCSGSCLL*HSFRATTHFVF Trigger: GAAGACGAAGTGGGTAGTAGCCCTGAACGAATGTCACAGGAGACAACTTCCTGAACAGAACACCAATAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084589.11 |
||
| 3UTR GCA 72 bp | TTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTaGCACACCTTGTCTGAAATACTTTATACATTCATA | + |
|
Preference number: 3 (lower is better) Translates to: FSSLLSAGITGV*HTLSEILYTFI Trigger: TATGAATGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | CCTAGCCCTGAGGAGATGCTGGCCAAAACCACTCCACACAGGCTTAACCCCACTAGGGGCCTGGGGCTCTaGGTCGGTCTCCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPEEMLAKTTPHRLNPTRGLGL*VGLLPL Trigger: GAGAGGGAGGAGACCGACTCAGAGCCCCAGGCCCCT...AGTGGGGTTAAGCCTGTGTGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGAGAGGCCAGCCTGGGTaGGTCCCAGGTAAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLRPAQEWETSGAPCCSGRGQPG*VPGKTA Trigger: CGCTGTCTTACCTGGGACTCACCCAGGCTGGCCTCT...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGCAGAACAAACTCCACTaGCGAGCACCCGGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPAQEWETSGAPCCSGQNKLH*RAPGGC Trigger: ACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTG...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACAGGGGCCTGGGGCTCTaGGTCGGTCTCCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNRGLGL*VGLLPL Trigger: GAGAGGGAGGAGACCGACTCAGAGCCCCAGGCCCCT...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | ACCTCCCCTAGCCCTGAGGAGATGCTGGCCAAAACCACTCCACACAGGCTTAACACGCCTGCTCCTGCTTaGGGATGTCATGGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSPEEMLAKTTPHRLNTPAPA*GCHGQR Trigger: GCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGT...GTTAAGCCTGTGTGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGGTAGAAGGCAGTCAGTaGGAGGAAGGTGACCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLRPAQEWETSGAPCCSGVEGSQ*EEGDLP Trigger: GGGGAGGTCACCTTCCTCTCACTGACTGCCTTCTAC...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGACTGTCCACCTTTCCTaGAGGGAGAGGTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRPAQEWETSGAPCCSGTVHLS*RERSQL Trigger: CAGCTGGGACCTCTCCCTCCAGGAAAGGTGGACAGT...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTAGGGGCCTGGGGCTCTaGGTCGGTCTCCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCRGLGL*VGLLPL Trigger: GAGAGGGAGGAGACCGACTCAGAGCCCCAGGCCCCT...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAAGGGGCCTGGGGCTCTaGGTCGGTCTCCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRARGLGL*VGLLPL Trigger: GAGAGGGAGGAGACCGACTCAGAGCCCCAGGCCCCT...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGGTTCAAGCAGACATCTaGCAGCAGGAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPAQEWETSGAPCCSGVQADI*QQEGQV Trigger: AACCTGGCCCTCCTGCTGGCAGATGTCTGCTTGAAC...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | ACCTCCCCTAGCCCTGAGGAGATGCTGGCCAAAACCACTCCACACAGGCTTAACCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSPSPEEMLAKTTPHRLNPDACS*LRMSWA Trigger: TGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGG...GTTAAGCCTGTGTGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGTGGTTTCCAGACGCCTaGTCCTGCTTGAGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLRPAQEWETSGAPCCSGWFPDA*SCLRMS Trigger: TGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCA...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGCCAGGTTGAGGCACTaGAGCAGGGCTAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWASTLPLNYSPSPQGLTARLRH*SRARTQ Trigger: CTGGGTCCTAGCCCTGCTCCAGTGCCTCAACCTGGC...GGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGCCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACTCAGTGAGAGGAAGGTaGCCTCCCCTAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNSVRGR*PPLALR Trigger: CCTCAGGGCTAGGGGAGGTCACCTTCCTCTCACTGA...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAAGAGGCCAGCCTGGGTaGGTCCCAGGTAAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRARGQPG*VPGKTA Trigger: CGCTGTCTTACCTGGGACTCACCCAGGCTGGCCTCT...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCAGAGGCCAGCCTGGGTaGGTCCCAGGTAAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLRGQPG*VPGKTA Trigger: CGCTGTCTTACCTGGGACTCACCCAGGCTGGCCTCT...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGACCACAAGAGACCCTTaGACACTGTCCACCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPAQEWETSGAPCCSGTTRDP*TLSTFP Trigger: AGGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGT...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCACCGGGCAGCAGTCTCTaGCTCGTTTTCCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRAPGSSL*LVFPSR Trigger: CCTGGAGGGGAAAACGAGGCAGAGACTGCTGCCCGG...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGCCGGGCAGCAGTCTCTaGCTCGTTTTCCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFSSLLSAGITGVCHTLPGSSL*LVFPSR Trigger: CCTGGAGGGGAAAACGAGGCAGAGACTGCTGCCCGG...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCCGGGCAGCAGTCTCTaGCTCGTTTTCCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLPGSSL*LVFPSR Trigger: CCTGGAGGGGAAAACGAGGCAGAGACTGCTGCCCGG...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCCGGGCAGCAGTCTCTaGCTCGTTTTCCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCPGSSL*LVFPSR Trigger: CCTGGAGGGGAAAACGAGGCAGAGACTGCTGCCCGG...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAGCTCCCAGCAGAACAAACTCCACTGACGAGCACCCGGGGGCTGTAAGGTGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: NKAPSRTNSTDEHPGAVRCLRMS*AALSIT Trigger: GGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCA...CCTTACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTGCTGGGAGCTTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTGGGGTGTGGGTGTTaGGCCTGGTTCCACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWASTLPLNYSPSPQGLTVGCGC*AWFHMA Trigger: AGCCATGTGGAACCAGGCCCAACACCCACACCCCAC...GGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGCCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGGCGAACACACCAGCCTaGTATAGCATCTGGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPAQEWETSGAPCCSGANTPA*YSIWYH Trigger: ATGGTACCAGATGCTATACCAGGCTGGTGTGTTCGC...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAGCCAGGTTGAGGCACTaGAGCAGGGCTAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRAARLRH*SRARTQ Trigger: CTGGGTCCTAGCCCTGCTCCAGTGCCTCAACCTGGC...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTACGCCTGCTCCTGCTTaGGGATGTCATGGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TWILQSAECWNYRCVPHLTPAPA*GCHGQR Trigger: GCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGT...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTACGCCTGCTCCTGCTTaGGGATGTCATGGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KMCDLLMCLQISVCRATPTPAPA*GCHGQR Trigger: GCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGT...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGCAGAACAAACTCCACTaGCGAGCACCCGGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGFSSLLSAGITGVCHTLQNKLH*RAPGGC Trigger: ACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTG...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCAGAACAAACTCCACTaGCGAGCACCCGGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLQNKLH*RAPGGC Trigger: ACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTG...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCAGAACAAACTCCACTaGCGAGCACCCGGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCQNKLH*RAPGGC Trigger: ACAGCCCCCGGGTGCTCGTCAGTGGAGTTTGTTCTG...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTTCAGTGAGAGGAAGGTaGCCTCCCCTAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCSVRGR*PPLALR Trigger: CCTCAGGGCTAGGGGAGGTCACCTTCCTCTCACTGA...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTGGGAGAGGTCCCAGCTaGCACCTGGCTTTGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCGRGPS*HLALTL Trigger: CAGAGTCAAAGCCAGGTGCCAGCTGGGACCTCTCCC...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCGGGAGAGGTCCCAGCTaGCACCTGGCTTTGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLGRGPS*HLALTL Trigger: CAGAGTCAAAGCCAGGTGCCAGCTGGGACCTCTCCC...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAAGCACCGCATGGCTCTaGTTTCCAGACGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRASTAWL*FPDACS Trigger: GGAGCAGGCGTCTGGAAACCAGAGCCATGCGGTGCT...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098036.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCTAGGAGCACCGCAGCTGTGGAGATGGAGTTGCAGTCAAATCGAGATGAGGATCCCTCATGGCTCTaGTTTCCAGACGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SARSTAAVEMELQSNRDEDPSWL*FPDACS Trigger: GGAGCAGGCGTCTGGAAACCAGAGCCATGAGGGATC...CTCATCTCGATTTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCCTAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTGTAGAAGGCAGTCAGTaGGAGGAAGGTGACCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCVEGSQ*EEGDLP Trigger: GGGGAGGTCACCTTCCTCTCACTGACTGCCTTCTAC...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCPDACS*LRMSWA Trigger: TGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGG...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCTGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: SWASTLPLNYSPSPQGLTCLRMS*AALSIT Trigger: GGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCA...GGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGCCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGGGTTCCACATGGCTCTaGTTTCCAGACGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGFSSLLSAGITGVCHTLGSTWL*FPDACS Trigger: GGAGCAGGCGTCTGGAAACCAGAGCCATGTGGAACC...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTGGTTCCACATGGCTCTaGTTTCCAGACGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCGSTWL*FPDACS Trigger: GGAGCAGGCGTCTGGAAACCAGAGCCATGTGGAACC...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTGGGGTGTGGGTGTTaGGCCTGGTTCCACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWILQSAECWNYRCVPHLVGCGC*AWFHMA Trigger: AGCCATGTGGAACCAGGCCCAACACCCACACCCCAC...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCACGAGATGAGCTGTTGTaGGGTGTGGGTGTTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRARDELL*GVGVGP Trigger: AGGCCCAACACCCACACCCCACAACAGCTCATCTCG...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACGGAGCACCGCAGCTGTaGAGATGGAGTTGCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNGAPQL*RWSCSQ Trigger: TTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCC...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTGGGAGAGGTCCCAGCTaGCACCTGGCTTTGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KMCDLLMCLQISVCRATPGRGPS*HLALTL Trigger: CAGAGTCAAAGCCAGGTGCCAGCTGGGACCTCTCCC...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCACTGTCCACCTTTCCTaGAGGGAGAGGTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLTVHLS*RERSQL Trigger: CAGCTGGGACCTCTCCCTCCAGGAAAGGTGGACAGT...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| 3UTR CAA 72 bp | AGTCAAATCGAGATGAGCTGTTGTGGGGTGTGGGTGTaGGGCCTGGTTCCACCCAGCCAGTTATGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQIEMSCCGVWV*GLVPPSQLCEF Trigger: GAACTCACATAACTGGCTGGGTGGAACCAGGCCCAACACCCACACCCCACAACAGCTCATCTCGATTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACAAGGGGCCTGGGGCTCTaGGTCGGTCTCCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSAGITGVCHTLSEILYTRGLGL*VGLLPL Trigger: GAGAGGGAGGAGACCGACTCAGAGCCCCAGGCCCCT...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTGCAGTCAAATCGAGATaGGCTGTTGTGGGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCAVKSR*AVVGCG Trigger: CCCACACCCCACAACAGCTCATCTCGATTTGACTGC...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTGTAGAAGGCAGTCAGTaGGAGGAAGGTGACCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KMCDLLMCLQISVCRATPVEGSQ*EEGDLP Trigger: GGGGAGGTCACCTTCCTCTCACTGACTGCCTTCTAC...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACAGAGGCCAGCCTGGGTaGGTCCCAGGTAAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LNCFPGIKLRAQDILGKYRGQPG*VPGKTA Trigger: CGCTGTCTTACCTGGGACTCACCCAGGCTGGCCTCT...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACGGGGTTCAGGAGACGTaGGCAACAAGAAATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNGVQET*ATRNSW Trigger: CCAGCTATTTCTTGTTGCTCACGTCTCCTGAACCCC...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACTCTACCCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFPGIKLRAQDILGKYSTPDACS*LRMSWA Trigger: TGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGG...GGTAGAGTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWILQSAECWNYRCVPHLPDACS*LRMSWA Trigger: TGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGG...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACTGGTTTCCAGACGCCTaGTCCTGCTTGAGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNWFPDA*SCLRMS Trigger: TGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCA...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGATGTCTGCTAGGAGCACCGCAGCTGTGGAGATGGAGTTGCAGTCAAATCTGGTTTCCAGACGCCTaGTCCTGCTTGAGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGCLLGAPQLWRWSCSQIWFPDA*SCLRMS Trigger: TGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCA...GATTTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCCTAGCAGACATCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR CCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCTGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLCLRMS*AALSIT Trigger: GGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCA...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGGTTCCACATGGCTCTaGTTTCCAGACGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TWILQSAECWNYRCVPHLGSTWL*FPDACS Trigger: GGAGCAGGCGTCTGGAAACCAGAGCCATGTGGAACC...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATGTGGGGTGTGGGTGTTaGGCCTGGTTCCACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYVGCGC*AWFHMA Trigger: AGCCATGTGGAACCAGGCCCAACACCCACACCCCAC...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACGCCAGGTTGAGGCACTaGAGCAGGGCTAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNCFPGIKLRAQDILGKYARLRH*SRARTQ Trigger: CTGGGTCCTAGCCCTGCTCCAGTGCCTCAACCTGGC...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACTCTACCGCAGTCAAATCGAGATaGGCTGTTGTGGGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFPGIKLRAQDILGKYSTAVKSR*AVVGCG Trigger: CCCACACCCCACAACAGCTCATCTCGATTTGACTGC...GGTAGAGTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAGGGGTTCAGGAGACGTaGGCAACAAGAAATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRAGVQET*ATRNSW Trigger: CCAGCTATTTCTTGTTGCTCACGTCTCCTGAACCCC...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTGTTCAAGCAGACATCTaGCAGCAGGAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMCDLLMCLQISVCRATPVQADI*QQEGQV Trigger: AACCTGGCCCTCCTGCTGGCAGATGTCTGCTTGAAC...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCCGCAGCTGTGGAGATaGAGTTGCAGTCAAATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLPQLWR*SCSQIE Trigger: CTCGATTTGACTGCAACTCCATCTCCACAGCTGCGG...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATACTGTCCACCTTTCCTaGAGGGAGAGGTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYTVHLS*RERSQL Trigger: CAGCTGGGACCTCTCCCTCCAGGAAAGGTGGACAGT...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACGCGAACACACCAGCCTaGTATAGCATCTGGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNANTPA*YSIWYH Trigger: ATGGTACCAGATGCTATACCAGGCTGGTGTGTTCGC...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACCTCGGTGCTTGTCACTaGTCTCCAGAGCAATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNLGACH*SPEQCC Trigger: ACAACATTGCTCTGGAGACCAGTGACAAGCACCGAG...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACTACAGGCAGCTTCCATaGCAAACTCTCGGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNYRQLP*QTLGAC Trigger: ACAAGCACCGAGAGTTTGCCATGGAAGCTGCCTGTA...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | ACCTCCCCTAGCCCTGAGGAGATGCTGGCCAAAACCACTCCACACAGGCTTAACCAGCATCACCACATATaGGAAATTGTTGCAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSPEEMLAKTTPHRLNQHHHI*EIVAKT Trigger: GGTCTTTGCAACAATTTCTCATATGTGGTGATGCTG...GTTAAGCCTGTGTGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACAACGCCTGCTCCTGCTTaGGGATGTCATGGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAGITGVCHTLSEILYTTPAPA*GCHGQR Trigger: GCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGT...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCTTAACCCCACTGACTaGGAGAAGGCAACCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCLNPTD*EKATRT Trigger: TGTTCTGGTTGCCTTCTCTCAGTCAGTGGGGTTAAG...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACTCTACCGGGGTTCAGGAGACGTaGGCAACAAGAAATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFPGIKLRAQDILGKYSTGVQET*ATRNSW Trigger: CCAGCTATTTCTTGTTGCTCACGTCTCCTGAACCCC...GGTAGAGTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTTGGTTTCCAGACGCCTaGTCCTGCTTGAGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TWILQSAECWNYRCVPHLWFPDA*SCLRMS Trigger: TGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCA...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATGTTCAAGCAGACATCTaGCAGCAGGAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYVQADI*QQEGQV Trigger: AACCTGGCCCTCCTGCTGGCAGATGTCTGCTTGAAC...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACCGAGATGAGCTGTTGTaGGGTGTGGGTGTTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNCFPGIKLRAQDILGKYRDELL*GVGVGP Trigger: AGGCCCAACACCCACACCCCACAACAGCTCATCTCG...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTCCGCAGCTGTGGAGATaGAGTTGCAGTCAAATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWILQSAECWNYRCVPHLPQLWR*SCSQIE Trigger: CTCGATTTGACTGCAACTCCATCTCCACAGCTGCGG...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATGGAGCACCGCAGCTGTaGAGATGGAGTTGCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYGAPQL*RWSCSQ Trigger: TTGACTGCAACTCCATCTCCACAGCTGCGGTGCTCC...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGGCGAACACACCAGCCTaGTATAGCATCTGGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGFSSLLSAGITGVCHTLANTPA*YSIWYH Trigger: ATGGTACCAGATGCTATACCAGGCTGGTGTGTTCGC...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR CCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGCTCGGTGCTTGTCACTaGTCTCCAGAGCAATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGFSSLLSAGITGVCHTLLGACH*SPEQCC Trigger: ACAACATTGCTCTGGAGACCAGTGACAAGCACCGAG...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR CCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTCGGTGCTTGTCACTaGTCTCCAGAGCAATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLLGACH*SPEQCC Trigger: ACAACATTGCTCTGGAGACCAGTGACAAGCACCGAG...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS-3UTR CCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTTACAGGCAGCTTCCATaGCAAACTCTCGGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCYRQLP*QTLGAC Trigger: ACAAGCACCGAGAGTTTGCCATGGAAGCTGCCTGTA...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCTACAGGCAGCTTCCATaGCAAACTCTCGGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLYRQLP*QTLGAC Trigger: ACAAGCACCGAGAGTTTGCCATGGAAGCTGCCTGTA...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS-3UTR TCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACATCAGTGAGAGGAAGGTaGCCTCCCCTAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAGITGVCHTLSEILYTSVRGR*PPLALR Trigger: CCTCAGGGCTAGGGGAGGTCACCTTCCTCTCACTGA...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR TCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATGGGGTTCAGGAGACGTaGGCAACAAGAAATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYGVQET*ATRNSW Trigger: CCAGCTATTTCTTGTTGCTCACGTCTCCTGAACCCC...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTACCACAAGAGACCCTTaGACACTGTCCACCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMCDLLMCLQISVCRATPTTRDP*TLSTFP Trigger: AGGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGT...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCACTGTGGAGATGGAGTTaGAGTCAAATCGAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRALWRWS*SQIEMS Trigger: GCTCATCTCGATTTGACTGCAACTCCATCTCCACAG...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATACCACAAGAGACCCTTaGACACTGTCCACCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYTTRDP*TLSTFP Trigger: AGGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGT...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | ACCTCCCCTAGCCCTGAGGAGATGCTGGCCAAAACCACTCCACACAGGCTTAACCATATGAGAAATTGTTaGAAAGACCCAAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSPSPEEMLAKTTPHRLNHMRNC*KDPRSR Trigger: TCTGGATCTTGGGTCTTTGCAACAATTTCTCATATG...GTTAAGCCTGTGTGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR GCA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACTGGTTTCCAGACGCCTaGTCCTGCTTGAGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFPGIKLRAQDILGKYWFPDA*SCLRMS Trigger: TGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCA...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGCAGCATCACCACATATaGGAAATTGTTGCAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LGFSSLLSAGITGVCHTLQHHHI*EIVAKT Trigger: GGTCTTTGCAACAATTTCTCATATGTGGTGATGCTG...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCAGCATCACCACATATaGGAAATTGTTGCAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLQHHHI*EIVAKT Trigger: GGTCTTTGCAACAATTTCTCATATGTGGTGATGCTG...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACAGCAGTCAAATCGAGATaGGCTGTTGTGGGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAGITGVCHTLSEILYTAVKSR*AVVGCG Trigger: CCCACACCCCACAACAGCTCATCTCGATTTGACTGC...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACCTTAACCCCACTGACTaGGAGAAGGCAACCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LNCFPGIKLRAQDILGKYLNPTD*EKATRT Trigger: TGTTCTGGTTGCCTTCTCTCAGTCAGTGGGGTTAAG...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATCTGTGGAGATGGAGTTaGAGTCAAATCGAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYLWRWS*SQIEMS Trigger: GCTCATCTCGATTTGACTGCAACTCCATCTCCACAG...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | TCCTGGGCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTTGATAAAGTATTCTaGAAAGTAGACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWASTLPLNYSPSPQGLTVDKVF*KVDQHQ Trigger: CTGGTGCTGGTCTACTTTGCAGAATACTTTATCAAC...GGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACGTTGATAAAGTATTCTaGAAAGTAGACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEGQRVGENSEASSGVGNVDKVF*KVDQHQ Trigger: CTGGTGCTGGTCTACTTTGCAGAATACTTTATCAAC...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS-3UTR CCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACATGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSAGITGVCHTLSEILYTCLRMS*AALSIT Trigger: GGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCA...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CATATATCTTTCACAGTGGGCTTATGTAAACTTTCCGTTTCAGAGACTGCACAAGGGAGAGGTCCCAGCTaGCACCTGGCTTTGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HISFTVGLCKLSVSETAQGRGPS*HLALTL Trigger: CAGAGTCAAAGCCAGGTGCCAGCTGGGACCTCTCCC...TTGTGCAGTCTCTGAAACGGAAAGTTTACATAAGCCCACTGTGAAAGATATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTCAGCATCACCACATATaGGAAATTGTTGCAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TWILQSAECWNYRCVPHLQHHHI*EIVAKT Trigger: GGTCTTTGCAACAATTTCTCATATGTGGTGATGCTG...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR TCA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTCAGCATCACCACATATaGGAAATTGTTGCAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KMCDLLMCLQISVCRATPQHHHI*EIVAKT Trigger: GGTCTTTGCAACAATTTCTCATATGTGGTGATGCTG...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAGTTGATAAAGTATTCTaGAAAGTAGACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCDLLMCLQISVCRAVDKVF*KVDQHQ Trigger: CTGGTGCTGGTCTACTTTGCAGAATACTTTATCAAC...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCGTTGATAAAGTATTCTaGAAAGTAGACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRCVICSCACRSVCVEQLVDKVF*KVDQHQ Trigger: CTGGTGCTGGTCTACTTTGCAGAATACTTTATCAAC...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS-3UTR CCA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTAGCCAGGTTGAGGCACTaGAGCAGGGCTAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFQALLQSYSNKTHTVARLRH*SRARTQ Trigger: CTGGGTCCTAGCCCTGCTCCAGTGCCTCAACCTGGC...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR TCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACACTTAACCCCACTGACTaGGAGAAGGCAACCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LSAGITGVCHTLSEILYTLNPTD*EKATRT Trigger: TGTTCTGGTTGCCTTCTCTCAGTCAGTGGGGTTAAG...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR TCA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTATCAGTGAGAGGAAGGTaGCCTCCCCTAGCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFQALLQSYSNKTHTVSVRGR*PPLALR Trigger: CCTCAGGGCTAGGGGAGGTCACCTTCCTCTCACTGA...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | TGGCAGAGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCATATGAGAAATTGTTaGAAAGACCCAAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WQSSKMCDLLMCLQISVCHMRNC*KDPRSR Trigger: TCTGGATCTTGGGTCTTTGCAACAATTTCTCATATG...ACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCTCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | CTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGCATATGAGAAATTGTTaGAAAGACCCAAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGFSSLLSAGITGVCHTLHMRNC*KDPRSR Trigger: TCTGGATCTTGGGTCTTTGCAACAATTTCTCATATG...CAAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR TCA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTAGTAGAAGGCAGTCAGTaGGAGGAAGGTGACCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLFQALLQSYSNKTHTVVEGSQ*EEGDLP Trigger: GGGGAGGTCACCTTCCTCTCACTGACTGCCTTCTAC...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | TGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACTCTACCCATATGAGAAATTGTTaGAAAGACCCAAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFPGIKLRAQDILGKYSTHMRNC*KDPRSR Trigger: TCTGGATCTTGGGTCTTTGCAACAATTTCTCATATG...GGTAGAGTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR GCA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTCATATGAGAAATTGTTaGAAAGACCCAAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TWILQSAECWNYRCVPHLHMRNC*KDPRSR Trigger: TCTGGATCTTGGGTCTTTGCAACAATTTCTCATATG...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR GCA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACACTGTGGAGATGGAGTTaGAGTCAAATCGAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAGITGVCHTLSEILYTLWRWS*SQIEMS Trigger: GCTCATCTCGATTTGACTGCAACTCCATCTCCACAG...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTATGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: PSLFQALLQSYSNKTHTVCLRMS*AALSIT Trigger: GGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCA...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CATATATCTTTCACAGTGGGCTTATGTAAACTTTCCGTTTCAGAGACTGCACAAGCGAACACACCAGCCTaGTATAGCATCTGGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HISFTVGLCKLSVSETAQANTPA*YSIWYH Trigger: ATGGTACCAGATGCTATACCAGGCTGGTGTGTTCGC...TTGTGCAGTCTCTGAAACGGAAAGTTTACATAAGCCCACTGTGAAAGATATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CATATATCTTTCACAGTGGGCTTATGTAAACTTTCCGTTTCAGAGACTGCACAACTCGGTGCTTGTCACTaGTCTCCAGAGCAATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HISFTVGLCKLSVSETAQLGACH*SPEQCC Trigger: ACAACATTGCTCTGGAGACCAGTGACAAGCACCGAG...TTGTGCAGTCTCTGAAACGGAAAGTTTACATAAGCCCACTGTGAAAGATATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CCA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTACCGCAGCTGTGGAGATaGAGTTGCAGTCAAATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFQALLQSYSNKTHTVPQLWR*SCSQIE Trigger: CTCGATTTGACTGCAACTCCATCTCCACAGCTGCGG...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS CCA 90 bp | GAGCTGTTGTGGGGTGTGGGTGTTGGGCCTGGTTCCACATGGCTCTaGTTTCCAGACGCCTGCTCCTGCTTGAGGATGTCATGGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ELLWGVGVGPGSTWL*FPDACSCLRMSWAA Trigger: CGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGTGGAACCAGGCCCAACACCCACACCCCACAACAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 ENSMUST00000128970.8 |
||
| CDS CCA 90 bp | ACTGCATTCTTCCAAAGGACACTCCGACTATCCAACCGAGGGGCCTaGGGCTCTGAGTCGGTCTCCTCCCTCTCAGAATCCTCAAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TAFFQRTLRLSNRGA*GSESVSSLSESSRR Trigger: GCGCCTTGAGGATTCTGAGAGGGAGGAGACCGACTCAGAGCCCCAGGCCCCTCGGTTGGATAGTCGGAGTGTCCTTTGGAAGAATGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 ENSMUST00000125508.8 ENSMUST00000128970.8 ENSMUST00000147086.2 ENSMUST00000150311.8 ENSMUST00000150587.8 ENSMUST00000150917.8 |
||
| CDS GCA 90 bp | GTTGGGCCTGGTTCCACATGGCTCTGGTTTCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCAGCGCTCAGCATCACCACATATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGPGSTWLWFPDACS*LRMSWAALSITTYE Trigger: CTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGTGGAACCAGGCCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 ENSMUST00000128970.8 |
||
| CDS GCA 90 bp | TCTGCTAGGAGCACCGCATGGCTCTGGTTTCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCAGCGCTCAGCATCACCACATATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SARSTAWLWFPDACS*LRMSWAALSITTYE Trigger: CTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGCGGTGCTCCTAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098036.9 ENSMUST00000125508.8 |
||
| CDS CCA 90 bp | GGGATGATGTACCACAAGAGACCCTTGAACACTGTCCACCTTTCCTaGAGGGAGAGGTCCCAGCTGGCACCTGGCTTTGACTCTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GMMYHKRPLNTVHLS*RERSQLAPGFDSGV Trigger: GACCCCAGAGTCAAAGCCAGGTGCCAGCTGGGACCTCTCCCTCCAGGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGTACATCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS CCA 90 bp | CACTGGAGCAGGGCTAGGACCCAGGTGAACCGTATTCGGCAACATTaGAGAGAAGAGCGGGAGGCGAACACACCAGCCTGGTATAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: HWSRARTQVNRIRQH*REEREANTPAWYSI Trigger: GATGCTATACCAGGCTGGTGTGTTCGCCTCCCGCTCTTCTCTCCAATGTTGCCGAATACGGTTCACCTGGGTCCTAGCCCTGCTCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACAGCTGGCACCTGGCTTaGACTCTGGGGTCTCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LEGQRVGENSEASSGVGNSWHLA*TLGSRC Trigger: GCACCGAGACCCCAGAGTCAAAGCCAGGTGCCAGCT...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCATGTGGGGTGTGGGTGTaGGGCCTGGTTCCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKMCDLLMCLQISVCRACGVWV*GLVPHG Trigger: GCCATGTGGAACCAGGCCCAACACCCACACCCCACA...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS TCA 90 bp | CTAGGAGCACCGCATGGCTCTGGTTTCCAGACGCCTGCTCCTGCTTaGGGATGTCATGGGCAGCGCTCAGCATCACCACATATGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGAPHGSGFQTPAPA*GCHGQRSASPHMRN Trigger: ATTTCTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGCGGTGCTCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098036.9 ENSMUST00000125508.8 |
||
| CDS CCA 90 bp | GCAGCTGTGGAGATGGAGTTGCAGTCAAATCGAGATGAGCTGTTGTaGGGTGTGGGTGTTGGGCCTGGTTCCACATGGCTCTGGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAVEMELQSNRDELL*GVGVGPGSTWLWFP Trigger: TGGAAACCAGAGCCATGTGGAACCAGGCCCAACACCCACACCCCACAACAGCTCATCTCGATTTGACTGCAACTCCATCTCCACAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 ENSMUST00000128970.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACTCTACCTGTGGGGTGTGGGTGTaGGGCCTGGTTCCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: CFPGIKLRAQDILGKYSTCGVWV*GLVPHG Trigger: GCCATGTGGAACCAGGCCCAACACCCACACCCCACA...GGTAGAGTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTTGTGGGGTGTGGGTGTaGGGCCTGGTTCCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KMCDLLMCLQISVCRATPCGVWV*GLVPHG Trigger: GCCATGTGGAACCAGGCCCAACACCCACACCCCACA...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | ACTTGGATTCTCCAGTCTGCTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTAGCTGGCACCTGGCTTaGACTCTGGGGTCTCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TWILQSAECWNYRCVPHLSWHLA*TLGSRC Trigger: GCACCGAGACCCCAGAGTCAAAGCCAGGTGCCAGCT...AAGGTGTGGCACACACCTGTAATTCCAGCACTCAGCAGACTGGAGAATCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTAGCTGGCACCTGGCTTaGACTCTGGGGTCTCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KMCDLLMCLQISVCRATPSWHLA*TLGSRC Trigger: GCACCGAGACCCCAGAGTCAAAGCCAGGTGCCAGCT...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS CCA 90 bp | CAGAGATACAGGCAGCTTCCATGGCAAACTCTCGGTGCTTGTCACTaGTCTCCAGAGCAATGTTGTGGAAGGTATTCACGTAAGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QRYRQLPWQTLGACH*SPEQCCGRYSRKRP Trigger: GGGCCGCTTACGTGAATACCTTCCACAACATTGCTCTGGAGACCAGTGACAAGCACCGAGAGTTTGCCATGGAAGCTGCCTGTATCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS CCA 90 bp | GCATGGCTCTGGTTTCCAGACGCCTGCTCCTGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACCACATATGAGAAATTGTTGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AWLWFPDACSCLRMS*AALSITTYEKLLQR Trigger: TCTTTGCAACAATTTCTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098036.9 ENSMUST00000125508.8 |
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| CDS-3UTR CAA 90 bp | AAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCCTAATCGAGATGAGCTGTaGTGGGGTGTGGGTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KMCDLLMCLQISVCRATPNRDEL*WGVGVG Trigger: CCCAACACCCACACCCCACAACAGCTCATCTCGATT...AGGAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCTACCACAAGAGACCCTaGAACACTGTCCACCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWASTLPLNYSPSPQGLTYHKRP*NTVHLS Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGTA...GGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGCCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | ACTCTGAGGCCAGCTCAGGAGTGGGAAACATCAGGGGCTCCTTGCTGCAGTGGGTCGAAAAGTCCCTGGTaGATAAAGTATTCTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLRPAQEWETSGAPCCSGSKSPW*IKYSAK Trigger: CTTTGCAGAATACTTTATCAACCAGGGACTTTTCGA...CCCACTGCAGCAAGGAGCCCCTGATGTTTCCCACTCCTGAGCTGGCCTCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS CCA 90 bp | ACATGGCTCTGGTTTCCAGACGCCTGCTCCTGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACCACATATGAGAAATTGTTGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TWLWFPDACSCLRMS*AALSITTYEKLLQR Trigger: TCTTTGCAACAATTTCTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 ENSMUST00000128970.8 |
||
| CDS CCA 90 bp | TCATGGCTCTGGTTTCCAGACGCCTGCTCCTGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACCACATATGAGAAATTGTTGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SWLWFPDACSCLRMS*AALSITTYEKLLQR Trigger: TCTTTGCAACAATTTCTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCATACCACAAGAGACCCTaGAACACTGTCCACCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKMCDLLMCLQISVCRAYHKRP*NTVHLS Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGTA...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCTACCACAAGAGACCCTaGAACACTGTCCACCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRCVICSCACRSVCVEQLYHKRP*NTVHLS Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGTA...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS-3UTR CAA 90 bp | ACCTCCCCTAGCCCTGAGGAGATGCTGGCCAAAACCACTCCACACAGGCTTAACACCACATATGAGAAATaGTTGCAAAGACCCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: TSPSPEEMLAKTTPHRLNTTYEK*LQRPKI Trigger: GATCTTGGGTCTTTGCAACAATTTCTCATATGTGGT...GTTAAGCCTGTGTGGAGTGGTTTTGGCCAGCATCTCCTCAGGGCTAGGGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATGCTGTGGAGATGGAGTaGCAGTCAAATCGAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYAVEME*QSNRDE Trigger: CTCATCTCGATTTGACTGCAACTCCATCTCCACAGC...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR CAA 90 bp | CATATATCTTTCACAGTGGGCTTATGTAAACTTTCCGTTTCAGAGACTGCACAAAGCTGGCACCTGGCTTaGACTCTGGGGTCTCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HISFTVGLCKLSVSETAQSWHLA*TLGSRC Trigger: GCACCGAGACCCCAGAGTCAAAGCCAGGTGCCAGCT...TTGTGCAGTCTCTGAAACGGAAAGTTTACATAAGCCCACTGTGAAAGATATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS GCA 90 bp | GGATGTCATGGGCAGCGCTCAGCATCACCACATATGAGAAATTGTTaGAAAGACCCAAGATCCAGAAACCCACTGCATTCTTCCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCHGQRSASPHMRNC*KDPRSRNPLHSSKG Trigger: TCCTTTGGAAGAATGCAGTGGGTTTCTGGATCTTGGGTCTTTGCAACAATTTCTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 ENSMUST00000125508.8 ENSMUST00000128970.8 ENSMUST00000150311.8 ENSMUST00000150587.8 ENSMUST00000150917.8 |
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| CDS GCA 90 bp | CCGGAAAAACAGGAGCTCGAAAAGTCCCTGGTTGATAAAGTATTCTaGAAAGTAGACCAGCACCAGAGGGATGATGTACCACAAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PEKQELEKSLVDKVF*KVDQHQRDDVPQET Trigger: GGTCTCTTGTGGTACATCATCCCTCTGGTGCTGGTCTACTTTGCAGAATACTTTATCAACCAGGGACTTTTCGAGCTCCTGTTTTTCCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGGGCAGAGGGTAGGAGAAAACTCTGAGGCCAGCTCAGGAGTGGGAAACACCACATATGAGAAATaGTTGCAAAGACCCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LEGQRVGENSEASSGVGNTTYEK*LQRPKI Trigger: GATCTTGGGTCTTTGCAACAATTTCTCATATGTGGT...GTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCCCTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCACCACATATGAGAAATaGTTGCAAAGACCCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SWASTLPLNYSPSPQGLTTTYEK*LQRPKI Trigger: GATCTTGGGTCTTTGCAACAATTTCTCATATGTGGT...GGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACAAATCGAGATGAGCTGTaGTGGGGTGTGGGTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAGITGVCHTLSEILYTNRDEL*WGVGVG Trigger: CCCAACACCCACACCCCACAACAGCTCATCTCGATT...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
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| CDS-3UTR CAA 90 bp | TTGAATTGTTTTCCAGGGATAAAACTGAGAGCCCAGGACATCCTGGGCAAGTACGCTGTGGAGATGGAGTaGCAGTCAAATCGAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNCFPGIKLRAQDILGKYAVEME*QSNRDE Trigger: CTCATCTCGATTTGACTGCAACTCCATCTCCACAGC...GTACTTGCCCAGGATGTCCTGGGCTCTCAGTTTTATCCCTGGAAAACAATTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | CGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCAACTCTCGAAAAGTCCCTGGTaGATAAAGTATTCTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRCVICSCACRSVCVEQLSKSPW*IKYSAK Trigger: CTTTGCAGAATACTTTATCAACCAGGGACTTTTCGA...GAGTTGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCGAAGATGTGTGATCTGCTCATGTGCCTGCAGATCAGTGTGTGTCGAGCATCGAAAAGTCCCTGGTaGATAAAGTATTCTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSKMCDLLMCLQISVCRASKSPW*IKYSAK Trigger: CTTTGCAGAATACTTTATCAACCAGGGACTTTTCGA...TGCTCGACACACACTGATCTGCAGGCACATGAGCAGATCACACATCTTCGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGTGCTGGAATTACAGGTGTGTGCCACACCTTGTCTGAAATACTTTATACATACCACAAGAGACCCTaGAACACTGTCCACCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSAGITGVCHTLSEILYTYHKRP*NTVHLS Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGTA...TGTATAAAGTATTTCAGACAAGGTGTGGCACACACCTGTAATTCCAGCACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATACCACATATGAGAAATaGTTGCAAAGACCCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYTTYEK*LQRPKI Trigger: GATCTTGGGTCTTTGCAACAATTTCTCATATGTGGT...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGTACTCTACCACTGAACTATAGCCCTAGTCCTCAGGGTCTCACCGTATATTCGAAAAGTCCCTGGTaGATAAAGTATTCTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASTLPLNYSPSPQGLTVYSKSPW*IKYSAK Trigger: CTTTGCAGAATACTTTATCAACCAGGGACTTTTCGA...ATATACGGTGAGACCCTGAGGACTAGGGCTATAGTTCAGTGGTAGAGTACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTAAATCGAGATGAGCTGTaGTGGGGTGTGGGTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLFQALLQSYSNKTHTVNRDEL*WGVGVG Trigger: CCCAACACCCACACCCCACAACAGCTCATCTCGATT...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | CCATCCTTATTTCAAGCACTACTACAGAGTTATAGTAATAAAACCCACACAGTAGCTGTGGAGATGGAGTaGCAGTCAAATCGAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLFQALLQSYSNKTHTVAVEME*QSNRDE Trigger: CTCATCTCGATTTGACTGCAACTCCATCTCCACAGC...TACTGTGTGGGTTTTATTACTATAACTCTGTAGTAGTGCTTGAAATAAGGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS-3UTR CAA 90 bp | CATATATCTTTCACAGTGGGCTTATGTAAACTTTCCGTTTCAGAGACTGCACAAACCACATATGAGAAATaGTTGCAAAGACCCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: HISFTVGLCKLSVSETAQTTYEK*LQRPKI Trigger: GATCTTGGGTCTTTGCAACAATTTCTCATATGTGGT...TTGTGCAGTCTCTGAAACGGAAAGTTTACATAAGCCCACTGTGAAAGATATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 |
||
| CDS TCA 72 bp | TGGCACCTGGCTTTGACTCTGGGGTCTCGGTGCCTATaGGAGGCTGCCGGGCAGCAGTCTCTGCCTCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: WHLALTLGSRCL*EAAGQQSLPRF Trigger: AAAACGAGGCAGAGACTGCTGCCCGGCAGCCTCTCATAGGCACCGAGACCCCAGAGTCAAAGCCAGGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
||
| CDS GCA 72 bp | AGCACCGCATGGCTCTGGTTTCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCAGCGCTCAGCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: STAWLWFPDACS*LRMSWAALSIT Trigger: GGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGCGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098036.9 ENSMUST00000125508.8 |
||
| CDS TCA 72 bp | CCGCATGGCTCTGGTTTCCAGACGCCTGCTCCTGCTTaGGGATGTCATGGGCAGCGCTCAGCATCACCACAT | + |
|
Preference number: 6 (lower is better) Translates to: PHGSGFQTPAPA*GCHGQRSASPH Trigger: ATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098036.9 ENSMUST00000125508.8 |
||
| CDS GCA 72 bp | GGTTCCACATGGCTCTGGTTTCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCAGCGCTCAGCATCACC | + |
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Preference number: 6 (lower is better) Translates to: GSTWLWFPDACS*LRMSWAALSIT Trigger: GGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGTGGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 ENSMUST00000128970.8 |
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| CDS GCA 72 bp | GATCCCTCATGGCTCTGGTTTCCAGACGCCTGCTCCTaGTTGAGGATGTCATGGGCAGCGCTCAGCATCACC | + |
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Preference number: 6 (lower is better) Translates to: DPSWLWFPDACS*LRMSWAALSIT Trigger: GGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGAGGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| CDS CCA 72 bp | TTCCAAAGGACACTCCGACTATCCAACCGAGGGGCCTaGGGCTCTGAGTCGGTCTCCTCCCTCTCAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: FQRTLRLSNRGA*GSESVSSLSES Trigger: GGATTCTGAGAGGGAGGAGACCGACTCAGAGCCCCAGGCCCCTCGGTTGGATAGTCGGAGTGTCCTTTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 ENSMUST00000125508.8 ENSMUST00000128970.8 ENSMUST00000147086.2 ENSMUST00000150311.8 ENSMUST00000150587.8 ENSMUST00000150917.8 |
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| CDS CCA 72 bp | AGGGCTAGGACCCAGGTGAACCGTATTCGGCAACATTaGAGAGAAGAGCGGGAGGCGAACACACCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RARTQVNRIRQH*REEREANTPAW Trigger: CCAGGCTGGTGTGTTCGCCTCCCGCTCTTCTCTCCAATGTTGCCGAATACGGTTCACCTGGGTCCTAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS CAA 72 bp | ACCGCATGGCTCTGGTTTCCAGACGCCTGCTCCTGCTaGAGGATGTCATGGGCAGCGCTCAGCATCACCACA | + |
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Preference number: 6 (lower is better) Translates to: TAWLWFPDACSC*RMSWAALSITT Trigger: TGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098036.9 ENSMUST00000125508.8 |
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| CDS CAA 72 bp | CCCTCATGGCTCTGGTTTCCAGACGCCTGCTCCTGCTaGAGGATGTCATGGGCAGCGCTCAGCATCACCACA | + |
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Preference number: 6 (lower is better) Translates to: PSWLWFPDACSC*RMSWAALSITT Trigger: TGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150917.8 |
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| CDS CCA 72 bp | GTGGGAAGGATGTCTGCTAGGAGCACCGCATGGCTCTaGTTTCCAGACGCCTGCTCCTGCTTGAGGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: VGRMSARSTAWL*FPDACSCLRMS Trigger: TGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGCGGTGCTCCTAGCAGACATCCTTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098036.9 ENSMUST00000125508.8 |
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| CDS CAA 90 bp | GCTAGGAGCACCGCATGGCTCTGGTTTCCAGACGCCTGCTCCTGCTaGAGGATGTCATGGGCAGCGCTCAGCATCACCACATATGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ARSTAWLWFPDACSC*RMSWAALSITTYEK Trigger: TTTCTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCAGAGCCATGCGGTGCTCCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098036.9 ENSMUST00000125508.8 |
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| CDS CCA 72 bp | TACCACAAGAGACCCTTGAACACTGTCCACCTTTCCTaGAGGGAGAGGTCCCAGCTGGCACCTGGCTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: YHKRPLNTVHLS*RERSQLAPGFD Trigger: GTCAAAGCCAGGTGCCAGCTGGGACCTCTCCCTCCAGGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS CAA 90 bp | ACCGCAGCTGTGGAGATGGAGTTGCAGTCAAATCGAGATGAGCTGTaGTGGGGTGTGGGTGTTGGGCCTGGTTCCACATGGCTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: TAAVEMELQSNRDEL*WGVGVGPGSTWLWF Trigger: AAACCAGAGCCATGTGGAACCAGGCCCAACACCCACACCCCACAACAGCTCATCTCGATTTGACTGCAACTCCATCTCCACAGCTGCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000116269.9 ENSMUST00000128970.8 |
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| CDS CAA 72 bp | ACCAGCACCAGAGGGATGATGTACCACAAGAGACCCTaGAACACTGTCCACCTTTCCTGGAGGGAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: TSTRGMMYHKRP*NTVHLSWRERS Trigger: GGACCTCTCCCTCCAGGAAAGGTGGACAGTGTTCAAGGGTCTCTTGTGGTACATCATCCCTCTGGTGCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS TCA 72 bp | CCAGCCTGGTATAGCATCTGGTACCATCGGTACTGCTaGGCATGGCTTAGGGAAGTGTTCCGGAAAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: PAWYSIWYHRYC*AWLREVFRKNR Trigger: CCTGTTTTTCCGGAACACTTCCCTAAGCCATGCTCAGCAGTACCGATGGTACCAGATGCTATACCAGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS CCA 72 bp | TGGTTTCCAGACGCCTGCTCCTGCTTGAGGATGTCATaGGCAGCGCTCAGCATCACCACATATGAGAAATTG | + |
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Preference number: 6 (lower is better) Translates to: WFPDACSCLRMS*AALSITTYEKL Trigger: CAATTTCTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCTCAAGCAGGAGCAGGCGTCTGGAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 ENSMUST00000125508.8 ENSMUST00000128970.8 ENSMUST00000150917.8 |
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| CDS GCA 72 bp | TCAGAGATACAGGCAGCTTCCATGGCAAACTCTCGGTaGTTGTCACTGGTCTCCAGAGCAATGTTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SEIQAASMANSR*LSLVSRAMLWK Trigger: CTTCCACAACATTGCTCTGGAGACCAGTGACAAGCACCGAGAGTTTGCCATGGAAGCTGCCTGTATCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS CCA 72 bp | AGGCAGCTTCCATGGCAAACTCTCGGTGCTTGTCACTaGTCTCCAGAGCAATGTTGTGGAAGGTATTCACGT | + |
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Preference number: 6 (lower is better) Translates to: RQLPWQTLGACH*SPEQCCGRYSR Trigger: ACGTGAATACCTTCCACAACATTGCTCTGGAGACCAGTGACAAGCACCGAGAGTTTGCCATGGAAGCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS CAA 72 bp | GAGATACAGGCAGCTTCCATGGCAAACTCTCGGTGCTaGTCACTGGTCTCCAGAGCAATGTTGTGGAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: EIQAASMANSRC*SLVSRAMLWKV Trigger: TACCTTCCACAACATTGCTCTGGAGACCAGTGACAAGCACCGAGAGTTTGCCATGGAAGCTGCCTGTATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 |
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| CDS GCA 72 bp | GGGCAGCGCTCAGCATCACCACATATGAGAAATTGTTaGAAAGACCCAAGATCCAGAAACCCACTGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: GQRSASPHMRNC*KDPRSRNPLHS Trigger: AGAATGCAGTGGGTTTCTGGATCTTGGGTCTTTGCAACAATTTCTCATATGTGGTGATGCTGAGCGCTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 ENSMUST00000125508.8 ENSMUST00000128970.8 ENSMUST00000150311.8 ENSMUST00000150587.8 ENSMUST00000150917.8 |
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| CDS CAA 90 bp | AGGATGTCATGGGCAGCGCTCAGCATCACCACATATGAGAAATTGTaGCAAAGACCCAAGATCCAGAAACCCACTGCATTCTTCCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: RMSWAALSITTYEKL*QRPKIQKPTAFFQR Trigger: CCTTTGGAAGAATGCAGTGGGTTTCTGGATCTTGGGTCTTTGCAACAATTTCTCATATGTGGTGATGCTGAGCGCTGCCCATGACATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 ENSMUST00000125508.8 ENSMUST00000128970.8 ENSMUST00000150311.8 ENSMUST00000150587.8 ENSMUST00000150917.8 |
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| CDS GCA 72 bp | GAAATTGTTGCAAAGACCCAAGATCCAGAAACCCACTaGATTCTTCCAAAGGACACTCCGACTATCCAACCG | + |
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Preference number: 6 (lower is better) Translates to: EIVAKTQDPETH*ILPKDTPTIQP Trigger: CGGTTGGATAGTCGGAGTGTCCTTTGGAAGAATGCAGTGGGTTTCTGGATCTTGGGTCTTTGCAACAATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000032962.11 ENSMUST00000084589.11 ENSMUST00000098036.9 ENSMUST00000116269.9 ENSMUST00000125508.8 ENSMUST00000128970.8 ENSMUST00000147086.2 ENSMUST00000150311.8 ENSMUST00000150587.8 ENSMUST00000150917.8 |
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