Pregenerated sensors for CLMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032024Ensembl transcript IDs: ENSMUST00000034522.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTACTCATCAGAACTGGTCCGTGCCATTTCTGCAGCTACTTAAGTaGGATCGTATCTGGCTGAGGGGCTTGCGTGGCTGGTGGACGAGC | + |
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Preference number: 1 (lower is better) Translates to: GTHQNWSVPFLQLLK*DRIWLRGLRGWWTS Trigger: GCTCGTCCACCAGCCACGCAAGCCCCTCAGCCAGATACGATCTCACTTAAGTAGCTGCAGAAATGGCACGGACCAGTTCTGATGAGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR TCA 90 bp | AAAGAGGAGCAGGAAGTGGTATGCAAGGGGATCTTTCAACATCCCTaGGAGACTTTCTCTAGAGGACTGTCCCTAAGGACATTCATTAAG | + |
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Preference number: 1 (lower is better) Translates to: KEEQEVVCKGIFQHP*ETFSRGLSLRTFIK Trigger: CTTAATGAATGTCCTTAGGGACAGTCCTCTAGAGAAAGTCTCTCAGGGATGTTGAAAGATCCCCTTGCATACCACTTCCTGCTCCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR GCA 90 bp | AAAATTGATCTACGAGATTCCCGCTTCTTCTTGACTGTGGTGACTTaGAACATCCTAGGTAAGATGTTTCAGGTGTGTGCAGCCTCACCT | + |
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Preference number: 1 (lower is better) Translates to: KIDLRDSRFFLTVVT*NILGKMFQVCAASP Trigger: AGGTGAGGCTGCACACACCTGAAACATCTTACCTAGGATGTTGCAAGTCACCACAGTCAAGAAGAAGCGGGAATCTCGTAGATCAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR GCA 90 bp | TTTAAAGAATTGGAATTTCCTTTTCAGACAAAGGGGACTGATCCCTaGTTGCAAAGCACAGGCAGGAAATCCGATGCTCAAAGGCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: FKELEFPFQTKGTDP*LQSTGRKSDAQRQG Trigger: TCCCTGCCTTTGAGCATCGGATTTCCTGCCTGTGCTTTGCAAGCAGGGATCAGTCCCCTTTGTCTGAAAAGGAAATTCCAATTCTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR TCA 90 bp | AGAATCGCCAAGTTTTGGGCCAGTATCAAATGTCCTTTGACCTACTaGGAGAAAGGTCTACTCTCCCTCTCTATTCCAAGCAGTCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: RIAKFWASIKCPLTY*EKGLLSLSIPSSLE Trigger: TTCAAGACTGCTTGGAATAGAGAGGGAGAGTAGACCTTTCTCTCAGTAGGTCAAAGGACATTTGATACTGGCCCAAAACTTGGCGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR TCA 90 bp | AGAATGAAAGAATCGCCAAGTTTTGGGCCAGTATCAAATGTCCTTTaGCCTACTGAGAGAAAGGTCTACTCTCCCTCTCTATTCCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: RMKESPSFGPVSNVL*PTERKVYSPSLFQA Trigger: TGCTTGGAATAGAGAGGGAGAGTAGACCTTTCTCTCAGTAGGTCAAAGGACATTTGATACTGGCCCAAAACTTGGCGATTCTTTCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CCA 90 bp | CTGAATATCAAAAAGGAAAGCTCTTCAGAGAATCATGTCCCATCTTaGTTGGACTCCCTCCTTAGTTATTATTTTAGGGTTCGACGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LNIKKESSSENHVPS*LDSLLSYYFRVRRK Trigger: TTTCCGTCGAACCCTAAAATAATAACTAAGGAGGGAGTCCAACCAAGATGGGACATGATTCTCTGAAGAGCTTTCCTTTTTGATATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CCA 90 bp | TTGGATATTCAGTGGTATTGGTTTCTAACAACACGTTTAAAGAATTaGAATTTCCTTTTCAGACAAAGGGGACTGATCCCTGCTTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LDIQWYWFLTTRLKN*NFLFRQRGLIPACK Trigger: TTTGCAAGCAGGGATCAGTCCCCTTTGTCTGAAAAGGAAATTCCAATTCTTTAAACGTGTTGTTAGAAACCAATACCACTGAATATCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR TCA 90 bp | CTGACTTTGCTTTGTTCTTTGAAGGGCTCATTCAGGTTTAGCAGCTGTGCCTTACCCCTCCACTCTGTCTaGAGGCACAGTGAGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LTLLCSLKGSFRFSSCALPLHSV*RHSEVP Trigger: AGGCACCTCACTGTGCCTTCAGACAGAGTGGAGGGG...TAAGGCACAGCTGCTAAACCTGAATGAGCCCTTCAAAGAACAAAGCAAAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CAA 90 bp | GCTCACCACCTACTCCCTAATGGCAGTTTACTCCTTCCAAGTCTCTaGGAGTCTACCGCTGAGAAGAAAGACAGCGAGGATACCGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: AHHLLPNGSLLLPSL*ESTAEKKDSEDTVQ Trigger: TTGAACGGTATCCTCGCTGTCTTTCTTCTCAGCGGTAGACTCCAAGAGACTTGGAAGGAGTAAACTGCCATTAGGGAGTAGGTGGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CAA 90 bp | GAGAAAATTGCTCCTGACAGCGCAGCTGCAGCCTTCATGGTAAGCTaGCATGGCTCAGGGACTCCAGGAATGAGAACGCTCAGAATTATA | + |
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Preference number: 2 (lower is better) Translates to: EKIAPDSAAAAFMVS*HGSGTPGMRTLRII Trigger: TATAATTCTGAGCGTTCTCATTCCTGGAGTCCCTGAGCCATGCAAGCTTACCATGAAGGCTGCAGCTGCGCTGTCAGGAGCAATTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTCCTTGTGTGAGTTGTTTGATACTTTTGCTGGTAGTGAATCCTTTCTGGCTGAGGGGCTTGCGTaGCTGGTGGACGAGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FFSLCELFDTFAGSESFLAEGLA*LVDELQ Trigger: CTGGAGCTCGTCCACCAGCCACGCAAGCCCCTCAGC...CAGAAAGGATTCACTACCAGCAAAAGTATCAAACAACTCACACAAGGAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCAGGGAACAGTGAGAAAATTGCTCCTGACAGCGCAGCTGCAGCCTTCAATCTTTCAACATCCCTaGGAGACTTTCTCTAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QRQGTVRKLLLTAQLQPSIFQHP*ETFSRG Trigger: TCCTCTAGAGAAAGTCTCTCAGGGATGTTGAAAGAT...TGAAGGCTGCAGCTGCGCTGTCAGGAGCAATTTTCTCACTGTTCCCTGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCGTTACTAAGACTTCAGTGCCTTATCTCTCAGAATTTCTCAGCTCCCAGGCCATGGGAGGGGTTTaGGTTTCAGTGCCTTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: SVVTKTSVPYLSEFLSSQAMGGV*VSVPLG Trigger: TCCTAAAGGCACTGAAACCCAAACCCCTCCCATGGC...CTGGGAGCTGAGAAATTCTGAGAGATAAGGCACTGAAGTCTTAGTAACGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CAA 90 bp | AGGCACAGTGAGGTGCCTTTAGAGATAGATGGTCAGCCTCCGTCCTaGTGTTTGTTTGGTATCCTATATAAGGAGGGTACTCATCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RHSEVPLEIDGQPPS*CLFGILYKEGTHQN Trigger: GTTCTGATGAGTACCCTCCTTATATAGGATACCAAACAAACACAAGGACGGAGGCTGACCATCTATCTCTAAAGGCACCTCACTGTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CAA 90 bp | TACTCTCCCTCTCTATTCCAAGCAGTCTTGAAATTCTGGTTGCTCTaGTTCCCAGAAAGAGGAGCAGGAAGTGGTATGCAAGGGGATCTT | + |
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Preference number: 2 (lower is better) Translates to: YSPSLFQAVLKFWLL*FPERGAGSGMQGDL Trigger: AAGATCCCCTTGCATACCACTTCCTGCTCCTCTTTCTGGGAACAAGAGCAACCAGAATTTCAAGACTGCTTGGAATAGAGAGGGAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCCTCTCTATTCCAAGCAGTCTTGAAATTCTGGTTGCTCTTGTTCCCAGAATCAGAACTGGTCCGTaGCATTTCTGCAGCTACTTA | + |
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Preference number: 2 (lower is better) Translates to: LSLSIPSSLEILVALVPRIRTGP*HFCSYL Trigger: TAAGTAGCTGCAGAAATGGCACGGACCAGTTCTGAT...TCTGGGAACAAGAGCAACCAGAATTTCAAGACTGCTTGGAATAGAGAGGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAAAGCACAGGCAGGAAATCCGATGCTCAAAGGCAGGGAACAGTGAGAAAAGGGAGTCAGTCAAATTaGAATAAAGAGCCACAACTG | + |
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Preference number: 2 (lower is better) Translates to: LQSTGRKSDAQRQGTVRKGSQSN*NKEPQL Trigger: CAGTTGTGGCTCTTTATTCCAATTTGACTGACTCCC...TTTTCTCACTGTTCCCTGCCTTTGAGCATCGGATTTCCTGCCTGTGCTTTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCAAAGCACAGGCAGGAAATCCGATGCTCAAAGGCAGGGAACAGTGAGAAAATATTCCAAGCAGTCTTaGAATTCTGGTTGCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LQSTGRKSDAQRQGTVRKYSKQS*NSGCSC Trigger: ACAAGAGCAACCAGAATTTCAAGACTGCTTGGAATA...TTTTCTCACTGTTCCCTGCCTTTGAGCATCGGATTTCCTGCCTGTGCTTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTATCAAATGTCCTTTGACCTACTGAGAGAAAGGTCTACTCTCCCTCTCTATGATGTTTCAGGTGTGTaGAGCCTCACCTTTCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: QYQMSFDLLRERSTLPLYDVSGV*SLTFPF Trigger: AAAGGGAAAGGTGAGGCTGCACACACCTGAAACATC...ATAGAGAGGGAGAGTAGACCTTTCTCTCAGTAGGTCAAAGGACATTTGATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAATCGCCAAGTTTTGGGCCAGTATCAAATGTCCTTTGACCTACTGAGAGAAAAGAGGAGCAGGAAGTaGTATGCAAGGGGATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: KNRQVLGQYQMSFDLLREKRSRK*YARGSF Trigger: GAAAGATCCCCTTGCATACCACTTCCTGCTCCTCTT...TTCTCTCAGTAGGTCAAAGGACATTTGATACTGGCCCAAAACTTGGCGATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCTCCTTGTGTGAGTTGTTTGATACTTTTGCTGGTAGTGAATCCTTTCTGGGTCCGTGCCATTTCTaGAGCTACTTAAGTGAGATC | + |
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Preference number: 2 (lower is better) Translates to: FFSLCELFDTFAGSESFLGPCHF*SYLSEI Trigger: GATCTCACTTAAGTAGCTGCAGAAATGGCACGGACC...CAGAAAGGATTCACTACCAGCAAAAGTATCAAACAACTCACACAAGGAGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CAA 90 bp | AGTCAAATTGGAATAAAGAGCCACAACTGCCCCGGGATAATCGTCTaGATATCTGTTGTCAAGCCTCTGAATATCAAAAAGGAAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SQIGIKSHNCPGIIV*ISVVKPLNIKKESS Trigger: AGAGCTTTCCTTTTTGATATTCAGAGGCTTGACAACAGATATCAAGACGATTATCCCGGGGCAGTTGTGGCTCTTTATTCCAATTTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTCCTTGTGTGAGTTGTTTGATACTTTTGCTGGTAGTGAATCCTTTCTGAATCATGTCCCATCTTaGTTGGACTCCCTCCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: FFSLCELFDTFAGSESFLNHVPS*LDSLLS Trigger: ACTAAGGAGGGAGTCCAACCAAGATGGGACATGATT...CAGAAAGGATTCACTACCAGCAAAAGTATCAAACAACTCACACAAGGAGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTTCTAACAACACGTTTAAAGAATTGGAATTTCCTTTTCAGACAAAGGGGCATGGTAAGCTTGCATaGCTCAGGGACTCCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LVSNNTFKELEFPFQTKGHGKLA*LRDSRN Trigger: ATTCCTGGAGTCCCTGAGCCATGCAAGCTTACCATG...CCCCTTTGTCTGAAAAGGAAATTCCAATTCTTTAAACGTGTTGTTAGAAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR TCA 72 bp | GGCCCCTCCTCCCCTCCACTCTGTCTGAAGGCACAGTaGGGTGCCTTTAGAGATAGATGGTCAGCCTCCGTC | + |
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Preference number: 3 (lower is better) Translates to: GPSSPPLCLKAQ*GAFRDRWSASV Trigger: GACGGAGGCTGACCATCTATCTCTAAAGGCACCTCACTGTGCCTTCAGACAGAGTGGAGGGGAGGAGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | CGAGGATACCGTTCAACCTCTCAGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTTCTCTGTCTCCCACATaGCAAATCCTCCCCAACCAA | + |
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Preference number: 3 (lower is better) Translates to: RGYRSTSQRGEGHGRGLGSLSPT*QILPNQ Trigger: TTGGTTGGGGAGGATTTGCAATGTGGGAGACAGAGA...ACCCAAACCCCTCCCATGGCCCTCTCCCCGCTGAGAGGTTGAACGGTATCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTCCCTTTTCTCTGTCTCCCACATTGCAAATCCTCCCCAACCAACGTTCAAAATCTGGCTGAGGGGCTaGCGTGGCTGGTGGACGAGC | + |
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Preference number: 3 (lower is better) Translates to: KSLFSVSHIANPPQPTFKIWLRG*RGWWTS Trigger: GCTCGTCCACCAGCCACGCAAGCCCCTCAGCCAGAT...TTTGAACGTTGGTTGGGGAGGATTTGCAATGTGGGAGACAGAGAAAAGGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | CTGACTTTGCTTTGTTCTTTGAAGGGCTCATTCAGGTTTAGCAGCTGTGCCTTATTTCACCAAATAAGCTaGGGCCCCTCCTCCCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LTLLCSLKGSFRFSSCALFHQIS*GPSSPP Trigger: TGGAGGGGAGGAGGGGCCCAAGCTTATTTGGTGAAA...TAAGGCACAGCTGCTAAACCTGAATGAGCCCTTCAAAGAACAAAGCAAAGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAGGCAGGGAACAGTGAGAAAATTGCTCCTGACAGCGCAGCTGCAGCCTTCAACTTTGCTTTGTTCTTaGAAGGGCTCATTCAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: QRQGTVRKLLLTAQLQPSTLLCS*KGSFRF Trigger: AAACCTGAATGAGCCCTTCAAAGAACAAAGCAAAGT...TGAAGGCTGCAGCTGCGCTGTCAGGAGCAATTTTCTCACTGTTCCCTGCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTCGTTACTAAGACTTCAGTGCCTTATCTCTCAGAATTTCTCAGCTCCCAGGGTCAGCCTCCGTCCTaGTGTTTGTTTGGTATCCTA | + |
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Preference number: 3 (lower is better) Translates to: SVVTKTSVPYLSEFLSSQGQPPS*CLFGIL Trigger: TAGGATACCAAACAAACACAAGGACGGAGGCTGACC...CTGGGAGCTGAGAAATTCTGAGAGATAAGGCACTGAAGTCTTAGTAACGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCTCCTTGTGTGAGTTGTTTGATACTTTTGCTGGTAGTGAATCCTTTCTGGGCCATGGGAGGGGTTaGGGTTTCAGTGCCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: FFSLCELFDTFAGSESFLGHGRG*GFSAFR Trigger: CCTAAAGGCACTGAAACCCAAACCCCTCCCATGGCC...CAGAAAGGATTCACTACCAGCAAAAGTATCAAACAACTCACACAAGGAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR GCA 72 bp | CTACGAGATTCCCGCTTCTTCTTGACTGTGGTGACTTaGAACATCCTAGGTAAGATGTTTCAGGTGTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LRDSRFFLTVVT*NILGKMFQVCA Trigger: TGCACACACCTGAAACATCTTACCTAGGATGTTGCAAGTCACCACAGTCAAGAAGAAGCGGGAATCTCGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR GCA 72 bp | TTGGAATTTCCTTTTCAGACAAAGGGGACTGATCCCTaGTTGCAAAGCACAGGCAGGAAATCCGATGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: LEFPFQTKGTDP*LQSTGRKSDAQ Trigger: TTGAGCATCGGATTTCCTGCCTGTGCTTTGCAAGCAGGGATCAGTCCCCTTTGTCTGAAAAGGAAATTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CCA 72 bp | AGCTGGCTTGGTTTGCAAAGTCAATGGAATAAGGTTTaGAGCCAGTCATGGCTTTTGCTCCATCTTCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: SWLGLQSQWNKV*SQSWLLLHLQL Trigger: GAGCTGAAGATGGAGCAAAAGCCATGACTGGCTCCAAACCTTATTCCATTGACTTTGCAAACCAAGCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR TCA 72 bp | GAATCGCCAAGTTTTGGGCCAGTATCAAATGTCCTTTaGCCTACTGAGAGAAAGGTCTACTCTCCCTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: ESPSFGPVSNVL*PTERKVYSPSL Trigger: TAGAGAGGGAGAGTAGACCTTTCTCTCAGTAGGTCAAAGGACATTTGATACTGGCCCAAAACTTGGCGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTCGTTACTAAGACTTCAGTGCCTTATCTCTCAGAATTTCTCAGCTCCCAGAAGAATCGCCAAGTTTaGGGCCAGTATCAAATGTCC | + |
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Preference number: 3 (lower is better) Translates to: SVVTKTSVPYLSEFLSSQKNRQV*GQYQMS Trigger: GGACATTTGATACTGGCCCAAAACTTGGCGATTCTT...CTGGGAGCTGAGAAATTCTGAGAGATAAGGCACTGAAGTCTTAGTAACGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR GCA 72 bp | TCCTATATAAGGAGGGTACTCATCAGAACTGGTCCGTaGCATTTCTGCAGCTACTTAAGTGAGATCGTATCT | + |
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Preference number: 3 (lower is better) Translates to: SYIRRVLIRTGP*HFCSYLSEIVS Trigger: AGATACGATCTCACTTAAGTAGCTGCAGAAATGGCACGGACCAGTTCTGATGAGTACCCTCCTTATATAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCTCCTTGTGTGAGTTGTTTGATACTTTTGCTGGTAGTGAATCCTTTCTGGATTCCCGCTTCTTCTaGACTGTGGTGACTTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: FFSLCELFDTFAGSESFLDSRFF*TVVTCN Trigger: GTTGCAAGTCACCACAGTCAAGAAGAAGCGGGAATC...CAGAAAGGATTCACTACCAGCAAAAGTATCAAACAACTCACACAAGGAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCGTGTTTTAATGCAGTTTTCCATTGGAAAGAGTTTCCAAAGTAATTTGGATGGGACTGATCCCTGCTaGCAAAGCACAGGCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: WRVLMQFSIGKSFQSNLDGTDPC*QSTGRK Trigger: TTTCCTGCCTGTGCTTTGCAAGCAGGGATCAGTCCC...ATCCAAATTACTTTGGAAACTCTTTCCAATGGAAAACTGCATTAAAACACGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR CCA 72 bp | AGGAAAGCTCTTCAGAGAATCATGTCCCATCTTGGTTaGACTCCCTCCTTAGTTATTATTTTAGGGTTCGAC | + |
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Preference number: 3 (lower is better) Translates to: RKALQRIMSHLG*TPSLVIILGFD Trigger: GTCGAACCCTAAAATAATAACTAAGGAGGGAGTCCAACCAAGATGGGACATGATTCTCTGAAGAGCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTATCAAATGTCCTTTGACCTACTGAGAGAAAGGTCTACTCTCCCTCTCTATCCTCCGTCCTTGTGTTaGTTTGGTATCCTATATAAG | + |
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Preference number: 3 (lower is better) Translates to: QYQMSFDLLRERSTLPLYPPSLC*FGILYK Trigger: CTTATATAGGATACCAAACAAACACAAGGACGGAGG...ATAGAGAGGGAGAGTAGACCTTTCTCTCAGTAGGTCAAAGGACATTTGATACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAATCGCCAAGTTTTGGGCCAGTATCAAATGTCCTTTGACCTACTGAGAGAAGTCTTGAAATTCTGGTaGCTCTTGTTCCCAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: KNRQVLGQYQMSFDLLREVLKFW*LLFPER Trigger: TCTTTCTGGGAACAAGAGCAACCAGAATTTCAAGAC...TTCTCTCAGTAGGTCAAAGGACATTTGATACTGGCCCAAAACTTGGCGATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTCGTTACTAAGACTTCAGTGCCTTATCTCTCAGAATTTCTCAGCTCCCAGTTCTCCTTGTGTGAGTaGTTTGATACTTTTGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SVVTKTSVPYLSEFLSSQFSLCE*FDTFAG Trigger: ACCAGCAAAAGTATCAAACAACTCACACAAGGAGAA...CTGGGAGCTGAGAAATTCTGAGAGATAAGGCACTGAAGTCTTAGTAACGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR-3UTR CAA 90 bp | AATAAGGTTTGGAGCCAGTCATGGCTTTTGCTCCATCTTCAGCTCATTCTCTGTACACCTTTCTTCTCCTaGTGTGAGTTGTTTGATACT | + |
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Preference number: 3 (lower is better) Translates to: NKVWSQSWLLLHLQLILCTPFFS*CELFDT Trigger: AGTATCAAACAACTCACACAAGGAGAAGAAAGGTGT...ACAGAGAATGAGCTGAAGATGGAGCAAAAGCCATGACTGGCTCCAAACCTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR GCA 72 bp | AAGGAAATGTGTGTACATCCTGTGAGGATGCTCTTATaGCAATTAAACGTAGGAATAAGAAGCCAGAGACAC | + |
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Preference number: 3 (lower is better) Translates to: KEMCVHPVRMLL*QLNVGIRSQRH Trigger: GTGTCTCTGGCTTCTTATTCCTACGTTTAATTGGCATAAGAGCATCCTCACAGGATGTACACACATTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| 3UTR GCA 72 bp | GTCAATGGAATAAGGTTTGGAGCCAGTCATGGCTTTTaGTCCATCTTCAGCTCATTCTCTGTCTTATTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VNGIRFGASHGF*SIFSSFSVLFN Trigger: GTTAAATAAGACAGAGAATGAGCTGAAGATGGAGCAAAAGCCATGACTGGCTCCAAACCTTATTCCATTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCTCCTTGTGTGAGTTGTTTGATACTTTTGCTGGTAGTGAATCCTTTCTGAAATTCTGGTTGCTCTaGTTCCCAGAAAGAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FFSLCELFDTFAGSESFLKFWLL*FPERGA Trigger: TGCTCCTCTTTCTGGGAACAAGAGCAACCAGAATTT...CAGAAAGGATTCACTACCAGCAAAAGTATCAAACAACTCACACAAGGAGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAAGGTTTGGAGCCAGTCATGGCTTTTGCTCCATCTTCAGCTCATTCTCTGTTCAAAAGTCCCACATTaGCATCCTTCTAGAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NKVWSQSWLLLHLQLILCSKVPH*HPSRMK Trigger: TTTCATTCTAGAAGGATGCAAATGTGGGACTTTTGA...ACAGAGAATGAGCTGAAGATGGAGCAAAAGCCATGACTGGCTCCAAACCTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGTGTTTTAATGCAGTTTTCCATTGGAAAGAGTTTCCAAAGTAATTTGGATCACGACCAGCTGACTTaGCTTTGTTCTTTGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: WRVLMQFSIGKSFQSNLDHDQLT*LCSLKG Trigger: GCCCTTCAAAGAACAAAGCAAAGTCAGCTGGTCGTG...ATCCAAATTACTTTGGAAACTCTTTCCAATGGAAAACTGCATTAAAACACGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR TCA 72 bp | AATCATCAAAAGTCCCACATTTGCATCCTTCTAGAATaGAAGAATCGCCAAGTTTTGGGCCAGTATCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: NHQKSHICILLE*KNRQVLGQYQM Trigger: CATTTGATACTGGCCCAAAACTTGGCGATTCTTTCATTCTAGAAGGATGCAAATGTGGGACTTTTGATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR GCA 72 bp | AATGAGATAAGAGTTAGTATAAGAAGCATTCAAATATaGCGGTTCTCTCAAATGGACAGGCACCTGTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: NEIRVSIRSIQI*RFSQMDRHLCC Trigger: ACAACACAGGTGCCTGTCCATTTGAGAGAACCGGCATATTTGAATGCTTCTTATACTAACTCTTATCTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR CCA 72 bp | TATCTCTCAGAATTTCTCAGCTCCCAGTATAATGTTTaGCGTGTTTTAATGCAGTTTTCCATTGGAAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: YLSEFLSSQYNV*RVLMQFSIGKS Trigger: ACTCTTTCCAATGGAAAACTGCATTAAAACACGCCAAACATTATACTGGGAGCTGAGAAATTCTGAGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGATACCGTTCAACCTCTCAGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTAGGCACTGTTCCCGGTaGAGCGGGTGGAGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGYRSTSQRGEGHGRGLGRHCSR*SGWRRS Trigger: GCTCCTCCTCCACCCGCTCCACCGGGAACAGTGCCT...ACCCAAACCCCTCCCATGGCCCTCTCCCCGCTGAGAGGTTGAACGGTATCCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGATACCGTTCAACCTCTCAGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTTCCAGCCTCGTTGCCTaGTGTGCACTGGTAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGYRSTSQRGEGHGRGLGSSLVA*CALVKP Trigger: GGGCTTTACCAGTGCACAGCAGGCAACGAGGCTGGA...ACCCAAACCCCTCCCATGGCCCTCTCCCCGCTGAGAGGTTGAACGGTATCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | AGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTTTCAGTGCCTTTAGGAAATGATGCGTCCGCTGGCTTCTaGAGGCACTGTTCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGERAMGGVWVSVPLGNDASAGF*RHCSRW Trigger: CCACCGGGAACAGTGCCTCCAGAAGCCAGCGGACGC...ATCATTTCCTAAAGGCACTGAAACCCAAACCCCTCCCATGGCCCTCTCCCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | AGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTTTCAGTGCCTTTAGGAAATGATCTCCTGCCAGGAAGTTaGAAGCGAAGGCCACTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGERAMGGVWVSVPLGNDLLPGS*KRRPLG Trigger: GCCGAGTGGCCTTCGCTTCCAACTTCCTGGCAGGAG...ATCATTTCCTAAAGGCACTGAAACCCAAACCCCTCCCATGGCCCTCTCCCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGATACCGTTCAACCTCTCAGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTGCTCACACTTGGGCTTaGATGGTCTCACTAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RGYRSTSQRGEGHGRGLGAHTWA*MVSLAL Trigger: AAGTGCTAGTGAGACCATCCAAGCCCAAGTGTGAGC...ACCCAAACCCCTCCCATGGCCCTCTCCCCGCTGAGAGGTTGAACGGTATCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR CAA 72 bp | GCTCCTGACAGCGCAGCTGCAGCCTTCATGGTAAGCTaGCATGGCTCAGGGACTCCAGGAATGAGAACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: APDSAAAAFMVS*HGSGTPGMRTL Trigger: GAGCGTTCTCATTCCTGGAGTCCCTGAGCCATGCAAGCTTACCATGAAGGCTGCAGCTGCGCTGTCAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCAGGGAACAGTGAGAAAATTGCTCCTGACAGCGCAGCTGCAGCCTTCAGAGGCAGACTCACACTaGAGCGTCAGGTCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRQGTVRKLLLTAQLQPSEADSH*SVRSLP Trigger: AGGAAGTGACCTGACGCTGCAGTGTGAGTCTGCCTC...TGAAGGCTGCAGCTGCGCTGTCAGGAGCAATTTTCTCACTGTTCCCTGCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | CTGACTTTGCTTTGTTCTTTGAAGGGCTCATTCAGGTTTAGCAGCTGTGCCTTATCCCGGTGGAGCGGGTaGAGGAGGAGCCAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLLCSLKGSFRFSSCALSRWSG*RRSQSV Trigger: CACGCTCTGGCTCCTCCTCCACCCGCTCCACCGGGA...TAAGGCACAGCTGCTAAACCTGAATGAGCCCTTCAAAGAACAAAGCAAAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCAGGGAACAGTGAGAAAATTGCTCCTGACAGCGCAGCTGCAGCCTTCATTCAGAGGCTCAATCTaGAGGGAAGCATCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQGTVRKLLLTAQLQPSFRGSI*REASPA Trigger: GGCAGGAGATGCTTCCCTGCAGATTGAGCCTCTGAA...TGAAGGCTGCAGCTGCGCTGTCAGGAGCAATTTTCTCACTGTTCCCTGCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTTTGCTTTGTTCTTTGAAGGGCTCATTCAGGTTTAGCAGCTGTGCCTTAATGAGGCTGTATGCCTaGGGGGCTAGCCCGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLLCSLKGSFRFSSCALMRLYA*GASPGC Trigger: GCAGCCCGGGCTAGCCCCGCAGGCATACAGCCTCAT...TAAGGCACAGCTGCTAAACCTGAATGAGCCCTTCAAAGAACAAAGCAAAGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | AGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTTTCAGTGCCTTTAGGAAATGATGTGTGGTTTCTGCTTTaGTCAGGGTCGTATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGERAMGGVWVSVPLGNDVWFLL*SGSYGG Trigger: TCCACCATACGACCCTGACCAAAGCAGAAACCACAC...ATCATTTCCTAAAGGCACTGAAACCCAAACCCCTCCCATGGCCCTCTCCCCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCAGGGAACAGTGAGAAAATTGCTCCTGACAGCGCAGCTGCAGCCTTCACTTCCAGCTCACACTTaGGCTTGGATGGTCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: QRQGTVRKLLLTAQLQPSLPAHT*AWMVSL Trigger: TAGTGAGACCATCCAAGCCCAAGTGTGAGCTGGAAG...TGAAGGCTGCAGCTGCGCTGTCAGGAGCAATTTTCTCACTGTTCCCTGCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | CGTCCTTGTGTTTGTTTGGTATCCTATATAAGGAGGGTACTCATCAGAACTGGTGGGCTCCTGCCACTATaGCTGTCACTGCTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPCVCLVSYIRRVLIRTGGLLPL*LSLLLP Trigger: TGGCAGGAGCAGTGACAGGCATAGTGGCAGGAGCCC...ACCAGTTCTGATGAGTACCCTCCTTATATAGGATACCAAACAAACACAAGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | AGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTTTCAGTGCCTTTAGGAAATGATATGGTGGACTTTCTTTaGTTCAGAACCTCTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGERAMGGVWVSVPLGNDMVDFL*FRTSHF Trigger: GAAGTGAGAGGTTCTGAACCAAAGAAAGTCCACCAT...ATCATTTCCTAAAGGCACTGAAACCCAAACCCCTCCCATGGCCCTCTCCCCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATCGCCAAGTTTTGGGCCAGTATCAAATGTCCTTTGACCTACTGAGAGAACCTCGTTGCCTGCTGTaGACTGGTAAAGCCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNRQVLGQYQMSFDLLREPRCLL*TGKAQR Trigger: CCTCTGGGCTTTACCAGTGCACAGCAGGCAACGAGG...TTCTCTCAGTAGGTCAAAGGACATTTGATACTGGCCCAAAACTTGGCGATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR CAA 72 bp | CTACTCCCTAATGGCAGTTTACTCCTTCCAAGTCTCTaGGAGTCTACCGCTGAGAAGAAAGACAGCGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPNGSLLLPSL*ESTAEKKDSED Trigger: ATCCTCGCTGTCTTTCTTCTCAGCGGTAGACTCCAAGAGACTTGGAAGGAGTAAACTGCCATTAGGGAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTTTGCTTTGTTCTTTGAAGGGCTCATTCAGGTTTAGCAGCTGTGCCTTACAGGGAAGCATCTCCTaGCAGGAAGTTGGAAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLLCSLKGSFRFSSCALQGSIS*QEVGSE Trigger: TTCGCTTCCAACTTCCTGGCAGGAGATGCTTCCCTG...TAAGGCACAGCTGCTAAACCTGAATGAGCCCTTCAAAGAACAAAGCAAAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCGTTACTAAGACTTCAGTGCCTTATCTCTCAGAATTTCTCAGCTCCCAGCACTATGCCTGTCACTaGTCCTGCCACCATGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVVTKTSVPYLSEFLSSQHYACH*SCHHAN Trigger: ATTGGCATGGTGGCAGGAGCAGTGACAGGCATAGTG...CTGGGAGCTGAGAAATTCTGAGAGATAAGGCACTGAAGTCTTAGTAACGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATCGCCAAGTTTTGGGCCAGTATCAAATGTCCTTTGACCTACTGAGAGAACCTTTCCAGCCTCGTTaGCTGCTGTGCACTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KNRQVLGQYQMSFDLLREPFQPR*LLCTGK Trigger: TTTACCAGTGCACAGCAGGCAACGAGGCTGGAAAGG...TTCTCTCAGTAGGTCAAAGGACATTTGATACTGGCCCAAAACTTGGCGATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCGTTACTAAGACTTCAGTGCCTTATCTCTCAGAATTTCTCAGCTCCCAGCTGCCACCATGCCAATaGTCTGCACATACTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SVVTKTSVPYLSEFLSSQLPPCQ*SAHTVQ Trigger: CTGTACAGTATGTGCAGAGCATTGGCATGGTGGCAG...CTGGGAGCTGAGAAATTCTGAGAGATAAGGCACTGAAGTCTTAGTAACGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAAAGCACAGGCAGGAAATCCGATGCTCAAAGGCAGGGAACAGTGAGAAAAGTCAGGGTCGTATGGTaGACTTTCTTTGGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQSTGRKSDAQRQGTVRKVRVVW*TFFGSE Trigger: TTCTGAACCAAAGAAAGTCCACCATACGACCCTGAC...TTTTCTCACTGTTCCCTGCCTTTGAGCATCGGATTTCCTGCCTGTGCTTTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCGTTACTAAGACTTCAGTGCCTTATCTCTCAGAATTTCTCAGCTCCCAGTCCCTTCATTATCGGTaGGCAGCCATTCAATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVVTKTSVPYLSEFLSSQSLHYR*AAIQCP Trigger: TGGACATTGAATGGCTGCTCACCGATAATGAAGGGA...CTGGGAGCTGAGAAATTCTGAGAGATAAGGCACTGAAGTCTTAGTAACGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR TCA 90 bp | CGTCCTTGTGTTTGTTTGGTATCCTATATAAGGAGGGTACTCATCAGAACTGGTATATCAGGAGGAAAATaGGCAGGGCTCCTGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: RPCVCLVSYIRRVLIRTGISGGK*AGLLPL Trigger: TAGTGGCAGGAGCCCTGCTCATTTTCCTCCTGATAT...ACCAGTTCTGATGAGTACCCTCCTTATATAGGATACCAAACAAACACAAGGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | ATATCTGTTGTCAAGCCTCTGAATATCAAAAAGGAAAGCTCTTCAGAGAATCATCTCGACAGCGTCCGCTaGCTTCTGGAGGCACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISVVKPLNIKKESSSENHLDSVR*LLEALF Trigger: GAACAGTGCCTCCAGAAGCCAGCGGACGCTGTCGAG...ATGATTCTCTGAAGAGCTTTCCTTTTTGATATTCAGAGGCTTGACAACAGATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR CAA 72 bp | GAGGTGCCTTTAGAGATAGATGGTCAGCCTCCGTCCTaGTGTTTGTTTGGTATCCTATATAAGGAGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EVPLEIDGQPPS*CLFGILYKEGT Trigger: AGTACCCTCCTTATATAGGATACCAAACAAACACAAGGACGGAGGCTGACCATCTATCTCTAAAGGCACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR TCA 90 bp | CAGTATCAAATGTCCTTTGACCTACTGAGAGAAAGGTCTACTCTCCCTCTCTATCTAGCACTTTCAAGATaGCATGGCTCCAGACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QYQMSFDLLRERSTLPLYLALSR*HGSRHS Trigger: GCTATGTCTGGAGCCATGTCATCTTGAAAGTGCTAG...ATAGAGAGGGAGAGTAGACCTTTCTCTCAGTAGGTCAAAGGACATTTGATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAAAGCACAGGCAGGAAATCCGATGCTCAAAGGCAGGGAACAGTGAGAAAATGTTGTAATCAATTCTaGATTTGGGTGGCAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSTGRKSDAQRQGTVRKCCNQF*IWVAGV Trigger: AACACCTGCCACCCAAATCCAGAATTGATTACAACA...TTTTCTCACTGTTCCCTGCCTTTGAGCATCGGATTTCCTGCCTGTGCTTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | CTGACTTTGCTTTGTTCTTTGAAGGGCTCATTCAGGTTTAGCAGCTGTGCCTTATTGGTCAGGGTCGTATaGTGGACTTTCTTTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLLCSLKGSFRFSSCALLVRVV*WTFFGS Trigger: TGAACCAAAGAAAGTCCACCATACGACCCTGACCAA...TAAGGCACAGCTGCTAAACCTGAATGAGCCCTTCAAAGAACAAAGCAAAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR CAA 72 bp | TCTCTATTCCAAGCAGTCTTGAAATTCTGGTTGCTCTaGTTCCCAGAAAGAGGAGCAGGAAGTGGTATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLFQAVLKFWLL*FPERGAGSGMQ Trigger: TTGCATACCACTTCCTGCTCCTCTTTCTGGGAACAAGAGCAACCAGAATTTCAAGACTGCTTGGAATAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | ATATCTGTTGTCAAGCCTCTGAATATCAAAAAGGAAAGCTCTTCAGAGAATCATGCCACTCGGCCCTTCTaGTCCTCGGTCAAGTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVVKPLNIKKESSSENHATRPF*SSVKLL Trigger: CAATAACTTGACCGAGGAGCAGAAGGGCCGAGTGGC...ATGATTCTCTGAAGAGCTTTCCTTTTTGATATTCAGAGGCTTGACAACAGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR CAA 72 bp | GGAATAAAGAGCCACAACTGCCCCGGGATAATCGTCTaGATATCTGTTGTCAAGCCTCTGAATATCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GIKSHNCPGIIV*ISVVKPLNIKK Trigger: CTTTTTGATATTCAGAGGCTTGACAACAGATATCAAGACGATTATCCCGGGGCAGTTGTGGCTCTTTATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTTTCTAACAACACGTTTAAAGAATTGGAATTTCCTTTTCAGACAAAGGGGCTCTTGATCTCAGTGTaGGTTCCCAGCGTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVSNNTFKELEFPFQTKGLLISV*VPSVPT Trigger: TGTTGGAACGCTGGGAACTCACACTGAGATCAAGAG...CCCCTTTGTCTGAAAAGGAAATTCCAATTCTTTAAACGTGTTGTTAGAAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | CGTCCTTGTGTTTGTTTGGTATCCTATATAAGGAGGGTACTCATCAGAACTGGTCCTCGTATCTGTCTTTaGTTTTCCTTCGTATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPCVCLVSYIRRVLIRTGPRICL*FSFVLA Trigger: TGCTAATACGAAGGAAAAGCAAAGACAGATACGAGG...ACCAGTTCTGATGAGTACCCTCCTTATATAGGATACCAAACAAACACAAGGACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTTTCTAACAACACGTTTAAAGAATTGGAATTTCCTTTTCAGACAAAGGGGGCTGAGTGTGGTTTCTaGTTTGGTCAGGGTCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LVSNNTFKELEFPFQTKGAECGF*FGQGRM Trigger: CATACGACCCTGACCAAAGCAGAAACCACACTCAGC...CCCCTTTGTCTGAAAAGGAAATTCCAATTCTTTAAACGTGTTGTTAGAAACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | CAGTATCAAATGTCCTTTGACCTACTGAGAGAAAGGTCTACTCTCCCTCTCTATGTAATAACCACTTTTTaGTTCCCTTCATTATCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QYQMSFDLLRERSTLPLYVITTF*FPSLSV Trigger: CACCGATAATGAAGGGAACCAAAAAGTGGTTATTAC...ATAGAGAGGGAGAGTAGACCTTTCTCTCAGTAGGTCAAAGGACATTTGATACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR GCA 90 bp | ATATCTGTTGTCAAGCCTCTGAATATCAAAAAGGAAAGCTCTTCAGAGAATCATGGTAACCTTTTCCTCTaGCACTCTCTTGATCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISVVKPLNIKKESSSENHGNLFL*HSLDLS Trigger: ACTGAGATCAAGAGAGTGGCAGAGGAAAAGGTTACC...ATGATTCTCTGAAGAGCTTTCCTTTTTGATATTCAGAGGCTTGACAACAGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR CAA 72 bp | TCAGTGGTATTGGTTTCTAACAACACGTTTAAAGAATaGGAATTTCCTTTTCAGACAAAGGGGACTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVVLVSNNTFKE*EFPFQTKGTDP Trigger: GGGATCAGTCCCCTTTGTCTGAAAAGGAAATTCCAATTCTTTAAACGTGTTGTTAGAAACCAATACCACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| 3UTR CAA 72 bp | CTTTTCTATTTGTTTCACATTAAAGACTCAGCTGGCTaGGTTTGCAAAGTCAATGGAATAAGGTTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFYLFHIKDSAG*VCKVNGIRFGA Trigger: GGCTCCAAACCTTATTCCATTGACTTTGCAAACCAAGCCAGCTGAGTCTTTAATGTGAAACAAATAGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS-3UTR CCA 90 bp | ATATCTGTTGTCAAGCCTCTGAATATCAAAAAGGAAAGCTCTTCAGAGAATCATAATCAATTCTGGATTTaGGTGGCAGGTGTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISVVKPLNIKKESSSENHNQFWI*VAGVHL Trigger: AAGATGAACACCTGCCACCCAAATCCAGAATTGATT...ATGATTCTCTGAAGAGCTTTCCTTTTTGATATTCAGAGGCTTGACAACAGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS CCA 90 bp | CGGGCTGCTGCGGCGCTGCTTCACTCGACAGCGTCCGCTGGCTTCTaGAGGCACTGTTCCCGGTGGAGCGGGTGGAGGAGGAGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAAAALLHSTASAGF*RHCSRWSGWRRSQS Trigger: GCTCTGGCTCCTCCTCCACCCGCTCCACCGGGAACAGTGCCTCCAGAAGCCAGCGGACGCTGTCGAGTGAAGCAGCGCCGCAGCAGCCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
||
| CDS CCA 90 bp | GCTAGCCCGGGCTGCTGCGGCGCTGCTTCACTCGACAGCGTCCGCTaGCTTCTGGAGGCACTGTTCCCGGTGGAGCGGGTGGAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASPGCCGAASLDSVR*LLEALFPVERVEEE Trigger: CTCCTCCTCCACCCGCTCCACCGGGAACAGTGCCTCCAGAAGCCAGCGGACGCTGTCGAGTGAAGCAGCGCCGCAGCAGCCCGGGCTAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 90 bp | TCCGGTCCTATGAGGCTGTATGCCTGCGGGGCTAGCCCGGGCTGCTaGGGCGCTGCTTCACTCGACAGCGTCCGCTGGCTTCTGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGPMRLYACGASPGC*GAASLDSVRWLLEA Trigger: TGCCTCCAGAAGCCAGCGGACGCTGTCGAGTGAAGCAGCGCCGCAGCAGCCCGGGCTAGCCCCGCAGGCATACAGCCTCATAGGACCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 90 bp | ACAGCGTCCGCTGGCTTCTGGAGGCACTGTTCCCGGTGGAGCGGGTaGAGGAGGAGCCAGAGCGTGAGCTCCGGGAGCCTGAGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TASAGFWRHCSRWSG*RRSQSVSSGSLRKR Trigger: CCTCTTCCTCAGGCTCCCGGAGCTCACGCTCTGGCTCCTCCTCCACCCGCTCCACCGGGAACAGTGCCTCCAGAAGCCAGCGGACGCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 90 bp | ACTTCCGGTCCTATGAGGCTGTATGCCTGCGGGGCTAGCCCGGGCTaGTGCGGCGCTGCTTCACTCGACAGCGTCCGCTGGCTTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TSGPMRLYACGASPG*CGAASLDSVRWLLE Trigger: CTCCAGAAGCCAGCGGACGCTGTCGAGTGAAGCAGCGCCGCAGCAGCCCGGGCTAGCCCCGCAGGCATACAGCCTCATAGGACCGGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 90 bp | TTTGGTTCAGAACCTCTCACTTCCGGTCCTATGAGGCTGTATGCCTaGGGGGCTAGCCCGGGCTGCTGCGGCGCTGCTTCACTCGACAGC | + |
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Preference number: 5 (lower is better) Translates to: FGSEPLTSGPMRLYA*GASPGCCGAASLDS Trigger: GCTGTCGAGTGAAGCAGCGCCGCAGCAGCCCGGGCTAGCCCCGCAGGCATACAGCCTCATAGGACCGGAAGTGAGAGGTTCTGAACCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | CGAGGATACCGTTCAACCTCTCAGCGGGGAGAGGGCCATGGGAGGGGTTTGGGTTCTCCTGCCAGGAAGTaGGAAGCGAAGGCCACTCGG | + |
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Preference number: 5 (lower is better) Translates to: RGYRSTSQRGEGHGRGLGSPARK*EAKATR Trigger: CCGAGTGGCCTTCGCTTCCAACTTCCTGGCAGGAGA...ACCCAAACCCCTCCCATGGCCCTCTCCCCGCTGAGAGGTTGAACGGTATCCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS TCA 90 bp | TATGGTGGACTTTCTTTGGTTCAGAACCTCTCACTTCCGGTCCTATaGGGCTGTATGCCTGCGGGGCTAGCCCGGGCTGCTGCGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: YGGLSLVQNLSLPVL*GCMPAGLARAAAAL Trigger: CAGCGCCGCAGCAGCCCGGGCTAGCCCCGCAGGCATACAGCCTCATAGGACCGGAAGTGAGAGGTTCTGAACCAAAGAAAGTCCACCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 90 bp | TACAGTCACCCGTACCACACAGCTCTCCTTTCCAGCCTCGTTGCCTaGTGTGCACTGGTAAAGCCCAGAGGAGGCCATGGTGAGATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSHPYHTALLSSLVA*CALVKPRGGHGEIL Trigger: CAGAATCTCACCATGGCCTCCTCTGGGCTTTACCAGTGCACAGCAGGCAACGAGGCTGGAAAGGAGAGCTGTGTGGTACGGGTGACTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS TCA 90 bp | CCTCGTTGCCTGCTGTGCACTGGTAAAGCCCAGAGGAGGCCATGGTaGGATTCTGCAGCAGCACTCGGCCAGGGTTGTTGTAATCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: PRCLLCTGKAQRRPW*DSAAALGQGCCNQF Trigger: GAATTGATTACAACAACCCTGGCCGAGTGCTGCTGCAGAATCTCACCATGGCCTCCTCTGGGCTTTACCAGTGCACAGCAGGCAACGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 90 bp | GAGGAAAATGAGCAGGGCTCCTGCCACTATGCCTGTCACTGCTCCTaGCACCATGCCAATGCTCTGCACATACTGTACAGTCACCCGTAC | + |
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Preference number: 5 (lower is better) Translates to: EENEQGSCHYACHCS*HHANALHILYSHPY Trigger: GTACGGGTGACTGTACAGTATGTGCAGAGCATTGGCATGGTGGCAGGAGCAGTGACAGGCATAGTGGCAGGAGCCCTGCTCATTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 90 bp | GTTTCAGAGGCTCAATCTGCAGGGAAGCATCTCCTGCCAGGAAGTTaGAAGCGAAGGCCACTCGGCCCTTCTGCTCCTCGGTCAAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: VSEAQSAGKHLLPGS*KRRPLGPSAPRSSY Trigger: ATAACTTGACCGAGGAGCAGAAGGGCCGAGTGGCCTTCGCTTCCAACTTCCTGGCAGGAGATGCTTCCCTGCAGATTGAGCCTCTGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 90 bp | TTGCAGGTGTATCTGCCTTCATCACTGGGTTTCAGAGGCTCAATCTaGAGGGAAGCATCTCCTGCCAGGAAGTTGGAAGCGAAGGCCACT | + |
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Preference number: 5 (lower is better) Translates to: LQVYLPSSLGFRGSI*REASPARKLEAKAT Trigger: AGTGGCCTTCGCTTCCAACTTCCTGGCAGGAGATGCTTCCCTGCAGATTGAGCCTCTGAAACCCAGTGATGAAGGCAGATACACCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 90 bp | GGGAAGCCCCAGTTGATGGTGACAGGGCAAGGTAACCTTTTCCTCTaGCACTCTCTTGATCTCAGTGTGAGTTCCCAGCGTTCCAACATA | + |
|
Preference number: 5 (lower is better) Translates to: GKPQLMVTGQGNLFL*HSLDLSVSSQRSNI Trigger: TATGTTGGAACGCTGGGAACTCACACTGAGATCAAGAGAGTGGCAGAGGAAAAGGTTACCTTGCCCTGTCACCATCAACTGGGGCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 90 bp | AGCGTCCTGAATTCTTCACCTTGCAGGTGTATCTGCCTTCATCACTaGGTTTCAGAGGCTCAATCTGCAGGGAAGCATCTCCTGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SVLNSSPCRCICLHH*VSEAQSAGKHLLPG Trigger: TCCTGGCAGGAGATGCTTCCCTGCAGATTGAGCCTCTGAAACCCAGTGATGAAGGCAGATACACCTGCAAGGTGAAGAATTCAGGACGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 90 bp | GGCGTTGTGCTGAGTGTGGTTTCTGCTTTGGTCAGGGTCGTATGGTaGACTTTCTTTGGTTCAGAACCTCTCACTTCCGGTCCTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVVLSVVSALVRVVW*TFFGSEPLTSGPMR Trigger: CCTCATAGGACCGGAAGTGAGAGGTTCTGAACCAAAGAAAGTCCACCATACGACCCTGACCAAAGCAGAAACCACACTCAGCACAACGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 90 bp | CTGGGCGTTGTGCTGAGTGTGGTTTCTGCTTTGGTCAGGGTCGTATaGTGGACTTTCTTTGGTTCAGAACCTCTCACTTCCGGTCCTATG | + |
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Preference number: 5 (lower is better) Translates to: LGVVLSVVSALVRVV*WTFFGSEPLTSGPM Trigger: CATAGGACCGGAAGTGAGAGGTTCTGAACCAAAGAAAGTCCACCATACGACCCTGACCAAAGCAGAAACCACACTCAGCACAACGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 90 bp | GGCTCCAGACATAGCGTCCTGAATTCTTCACCTTGCAGGTGTATCTaGCTTCATCACTGGGTTTCAGAGGCTCAATCTGCAGGGAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GSRHSVLNSSPCRCI*LHHWVSEAQSAGKH Trigger: ATGCTTCCCTGCAGATTGAGCCTCTGAAACCCAGTGATGAAGGCAGATACACCTGCAAGGTGAAGAATTCAGGACGCTATGTCTGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 90 bp | GAGTGTGGTTTCTGCTTTGGTCAGGGTCGTATGGTGGACTTTCTTTaGTTCAGAACCTCTCACTTCCGGTCCTATGAGGCTGTATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ECGFCFGQGRMVDFL*FRTSHFRSYEAVCL Trigger: CAGGCATACAGCCTCATAGGACCGGAAGTGAGAGGTTCTGAACCAAAGAAAGTCCACCATACGACCCTGACCAAAGCAGAAACCACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | CTGACTTTGCTTTGTTCTTTGAAGGGCTCATTCAGGTTTAGCAGCTGTGCCTTACTCGGGAAGCCCCAGTaGATGGTGACAGGGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LTLLCSLKGSFRFSSCALLGKPQ*MVTGQG Trigger: ACCTTGCCCTGTCACCATCAACTGGGGCTTCCCGAG...TAAGGCACAGCTGCTAAACCTGAATGAGCCCTTCAAAGAACAAAGCAAAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | ACCCCTTGTTTTGCTCACCACCTACTCCCTAATGGCAGTTTACTCCTTCCAAGTCCTTCCAGCTCACACTaGGGCTTGGATGGTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TPCFAHHLLPNGSLLLPSPSSSH*GLDGLT Trigger: AGTGAGACCATCCAAGCCCAAGTGTGAGCTGGAAGG...ACTTGGAAGGAGTAAACTGCCATTAGGGAGTAGGTGGTGAGCAAAACAAGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | TTGCAAAGCACAGGCAGGAAATCCGATGCTCAAAGGCAGGGAACAGTGAGAAAAAGCTCACACTTGGGCTaGGATGGTCTCACTAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LQSTGRKSDAQRQGTVRKSSHLG*DGLTST Trigger: AGTGCTAGTGAGACCATCCAAGCCCAAGTGTGAGCT...TTTTCTCACTGTTCCCTGCCTTTGAGCATCGGATTTCCTGCCTGTGCTTTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | CAAAGGCAGGGAACAGTGAGAAAATTGCTCCTGACAGCGCAGCTGCAGCCTTCACGTAATAACCACTTTTaGGTTCCCTTCATTATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QRQGTVRKLLLTAQLQPSRNNHF*VPFIIG Trigger: ACCGATAATGAAGGGAACCAAAAAGTGGTTATTACG...TGAAGGCTGCAGCTGCGCTGTCAGGAGCAATTTTCTCACTGTTCCCTGCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | AATAAGGTTTGGAGCCAGTCATGGCTTTTGCTCCATCTTCAGCTCATTCTCTGTCCTGAATTCTTCACCTaGCAGGTGTATCTGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: NKVWSQSWLLLHLQLILCPEFFT*QVYLPS Trigger: TGAAGGCAGATACACCTGCAAGGTGAAGAATTCAGG...ACAGAGAATGAGCTGAAGATGGAGCAAAAGCCATGACTGGCTCCAAACCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | ACCCCTTGTTTTGCTCACCACCTACTCCCTAATGGCAGTTTACTCCTTCCAAGTTCCTCGTATCTGTCTTaGCTTTTCCTTCGTATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPCFAHHLLPNGSLLLPSSSYLS*LFLRIS Trigger: GCTAATACGAAGGAAAAGCAAAGACAGATACGAGGA...ACTTGGAAGGAGTAAACTGCCATTAGGGAGTAGGTGGTGAGCAAAACAAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | TGGCGTGTTTTAATGCAGTTTTCCATTGGAAAGAGTTTCCAAAGTAATTTGGATAGTGTGGTTTCTGCTTaGGTCAGGGTCGTATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WRVLMQFSIGKSFQSNLDSVVSA*VRVVWW Trigger: CCACCATACGACCCTGACCAAAGCAGAAACCACACT...ATCCAAATTACTTTGGAAACTCTTTCCAATGGAAAACTGCATTAAAACACGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS-3UTR CAA 90 bp | ATATCTGTTGTCAAGCCTCTGAATATCAAAAAGGAAAGCTCTTCAGAGAATCATTATGGTGGACTTTCTTaGGTTCAGAACCTCTCACTT | + |
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Preference number: 5 (lower is better) Translates to: ISVVKPLNIKKESSSENHYGGLS*VQNLSL Trigger: AAGTGAGAGGTTCTGAACCAAAGAAAGTCCACCATA...ATGATTCTCTGAAGAGCTTTCCTTTTTGATATTCAGAGGCTTGACAACAGATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 72 bp | CCTATGAGGCTGTATGCCTGCGGGGCTAGCCCGGGCTaGTGCGGCGCTGCTTCACTCGACAGCGTCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PMRLYACGASPG*CGAASLDSVRW Trigger: CCAGCGGACGCTGTCGAGTGAAGCAGCGCCGCAGCAGCCCGGGCTAGCCCCGCAGGCATACAGCCTCATAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 72 bp | GCTGGCTTCTGGAGGCACTGTTCCCGGTGGAGCGGGTaGAGGAGGAGCCAGAGCGTGAGCTCCGGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: AGFWRHCSRWSG*RRSQSVSSGSL Trigger: CAGGCTCCCGGAGCTCACGCTCTGGCTCCTCCTCCACCCGCTCCACCGGGAACAGTGCCTCCAGAAGCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 72 bp | GGCTGCTGCGGCGCTGCTTCACTCGACAGCGTCCGCTaGCTTCTGGAGGCACTGTTCCCGGTGGAGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCCGAASLDSVR*LLEALFPVERV Trigger: CACCCGCTCCACCGGGAACAGTGCCTCCAGAAGCCAGCGGACGCTGTCGAGTGAAGCAGCGCCGCAGCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 72 bp | ATGAGGCTGTATGCCTGCGGGGCTAGCCCGGGCTGCTaGGGCGCTGCTTCACTCGACAGCGTCCGCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: MRLYACGASPGC*GAASLDSVRWL Trigger: AAGCCAGCGGACGCTGTCGAGTGAAGCAGCGCCGCAGCAGCCCGGGCTAGCCCCGCAGGCATACAGCCTCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 72 bp | GCTCAATCTGCAGGGAAGCATCTCCTGCCAGGAAGTTaGAAGCGAAGGCCACTCGGCCCTTCTGCTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: AQSAGKHLLPGS*KRRPLGPSAPR Trigger: CCGAGGAGCAGAAGGGCCGAGTGGCCTTCGCTTCCAACTTCCTGGCAGGAGATGCTTCCCTGCAGATTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 72 bp | GGCTCAATCTGCAGGGAAGCATCTCCTGCCAGGAAGTaGGAAGCGAAGGCCACTCGGCCCTTCTGCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GSICREASPARK*EAKATRPFCSS Trigger: CGAGGAGCAGAAGGGCCGAGTGGCCTTCGCTTCCAACTTCCTGGCAGGAGATGCTTCCCTGCAGATTGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 72 bp | CCGTACCACACAGCTCTCCTTTCCAGCCTCGTTGCCTaGTGTGCACTGGTAAAGCCCAGAGGAGGCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: PYHTALLSSLVA*CALVKPRGGHG Trigger: ACCATGGCCTCCTCTGGGCTTTACCAGTGCACAGCAGGCAACGAGGCTGGAAAGGAGAGCTGTGTGGTACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 72 bp | TCACCCGTACCACACAGCTCTCCTTTCCAGCCTCGTTaGCTGCTGTGCACTGGTAAAGCCCAGAGGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPVPHSSPFQPR*LLCTGKAQRRP Trigger: TGGCCTCCTCTGGGCTTTACCAGTGCACAGCAGGCAACGAGGCTGGAAAGGAGAGCTGTGTGGTACGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS TCA 72 bp | CTGCTGTGCACTGGTAAAGCCCAGAGGAGGCCATGGTaGGATTCTGCAGCAGCACTCGGCCAGGGTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LLCTGKAQRRPW*DSAAALGQGCC Trigger: ACAACAACCCTGGCCGAGTGCTGCTGCAGAATCTCACCATGGCCTCCTCTGGGCTTTACCAGTGCACAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 90 bp | GGTTTCAGAGGCTCAATCTGCAGGGAAGCATCTCCTGCCAGGAAGTaGGAAGCGAAGGCCACTCGGCCCTTCTGCTCCTCGGTCAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: GFRGSICREASPARK*EAKATRPFCSSVKL Trigger: TAACTTGACCGAGGAGCAGAAGGGCCGAGTGGCCTTCGCTTCCAACTTCCTGGCAGGAGATGCTTCCCTGCAGATTGAGCCTCTGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 90 bp | AGCGTCAGGTCACTTCCTTCGGTCGGCTCTCCTTCCAGCTCACACTaGGGCTTGGATGGTCTCACTAGCACTTTCAAGATGACATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVRSLPSVGSPSSSH*GLDGLTSTFKMTWL Trigger: GAGCCATGTCATCTTGAAAGTGCTAGTGAGACCATCCAAGCCCAAGTGTGAGCTGGAAGGAGAGCCGACCGAAGGAAGTGACCTGACGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 72 bp | CCTTCGGTCGGCTCTCCTTCCAGCTCACACTTGGGCTaGGATGGTCTCACTAGCACTTTCAAGATGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: PSVGSPSSSHLG*DGLTSTFKMTW Trigger: CCATGTCATCTTGAAAGTGCTAGTGAGACCATCCAAGCCCAAGTGTGAGCTGGAAGGAGAGCCGACCGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 90 bp | GAGCAGCCATTCAATGTCCAGGGTGTCTTTCTCGGGAAGCCCCAGTaGATGGTGACAGGGCAAGGTAACCTTTTCCTCTGCCACTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: EQPFNVQGVFLGKPQ*MVTGQGNLFLCHSL Trigger: AAGAGAGTGGCAGAGGAAAAGGTTACCTTGCCCTGTCACCATCAACTGGGGCTTCCCGAGAAAGACACCCTGGACATTGAATGGCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 90 bp | AGGTCACTTCCTTCGGTCGGCTCTCCTTCCAGCTCACACTTGGGCTaGGATGGTCTCACTAGCACTTTCAAGATGACATGGCTCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: RSLPSVGSPSSSHLG*DGLTSTFKMTWLQT Trigger: TGTCTGGAGCCATGTCATCTTGAAAGTGCTAGTGAGACCATCCAAGCCCAAGTGTGAGCTGGAAGGAGAGCCGACCGAAGGAAGTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 72 bp | TATCTGCCTTCATCACTGGGTTTCAGAGGCTCAATCTaGAGGGAAGCATCTCCTGCCAGGAAGTTGGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: YLPSSLGFRGSI*REASPARKLEA Trigger: CGCTTCCAACTTCCTGGCAGGAGATGCTTCCCTGCAGATTGAGCCTCTGAAACCCAGTGATGAAGGCAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 72 bp | GCACTCGGCCAGGGTTGTTGTAATCAATTCTGGATTTaGGTGGCAGGTGTTCATCTTCTCCCTCCTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALGQGCCNQFWI*VAGVHLLPPSP Trigger: GGGAGAAGGAGGGAGAAGATGAACACCTGCCACCCAAATCCAGAATTGATTACAACAACCCTGGCCGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 72 bp | GCAGCAGCACTCGGCCAGGGTTGTTGTAATCAATTCTaGATTTGGGTGGCAGGTGTTCATCTTCTCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAALGQGCCNQF*IWVAGVHLLPP Trigger: AGGAGGGAGAAGATGAACACCTGCCACCCAAATCCAGAATTGATTACAACAACCCTGGCCGAGTGCTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 72 bp | TTCAATGTCCAGGGTGTCTTTCTCGGGAAGCCCCAGTaGATGGTGACAGGGCAAGGTAACCTTTTCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FNVQGVFLGKPQ*MVTGQGNLFLC Trigger: GCAGAGGAAAAGGTTACCTTGCCCTGTCACCATCAACTGGGGCTTCCCGAGAAAGACACCCTGGACATTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 72 bp | TCACTTCCTTCGGTCGGCTCTCCTTCCAGCTCACACTaGGGCTTGGATGGTCTCACTAGCACTTTCAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLPSVGSPSSSH*GLDGLTSTFKM Trigger: CATCTTGAAAGTGCTAGTGAGACCATCCAAGCCCAAGTGTGAGCTGGAAGGAGAGCCGACCGAAGGAAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 72 bp | CTCTGGCTGGGCGTTGTGCTGAGTGTGGTTTCTGCTTaGGTCAGGGTCGTATGGTGGACTTTCTTTGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LWLGVVLSVVSA*VRVVWWTFFGS Trigger: TGAACCAAAGAAAGTCCACCATACGACCCTGACCAAAGCAGAAACCACACTCAGCACAACGCCCAGCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 90 bp | AAGGCTTTGCTCTGGCTGGGCGTTGTGCTGAGTGTGGTTTCTGCTTaGGTCAGGGTCGTATGGTGGACTTTCTTTGGTTCAGAACCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KALLWLGVVLSVVSA*VRVVWWTFFGSEPL Trigger: GAGAGGTTCTGAACCAAAGAAAGTCCACCATACGACCCTGACCAAAGCAGAAACCACACTCAGCACAACGCCCAGCCAGAGCAAAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 72 bp | CAGTTGATGGTGACAGGGCAAGGTAACCTTTTCCTCTaGCACTCTCTTGATCTCAGTGTGAGTTCCCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: QLMVTGQGNLFL*HSLDLSVSSQR Trigger: ACGCTGGGAACTCACACTGAGATCAAGAGAGTGGCAGAGGAAAAGGTTACCTTGCCCTGTCACCATCAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CCA 72 bp | TCGGCCAGGGTTGTTGTAATCAATTCTGGATTTGGGTaGCAGGTGTTCATCTTCTCCCTCCTTCTCCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: SARVVVINSGFG*QVFIFSLLLPD Trigger: ATCCGGGAGAAGGAGGGAGAAGATGAACACCTGCCACCCAAATCCAGAATTGATTACAACAACCCTGGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 72 bp | CATGGCTCCAGACATAGCGTCCTGAATTCTTCACCTTaGAGGTGTATCTGCCTTCATCACTGGGTTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: HGSRHSVLNSSP*RCICLHHWVSE Trigger: CTCTGAAACCCAGTGATGAAGGCAGATACACCTGCAAGGTGAAGAATTCAGGACGCTATGTCTGGAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS GCA 72 bp | CATAGCGTCCTGAATTCTTCACCTTGCAGGTGTATCTaGCTTCATCACTGGGTTTCAGAGGCTCAATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: HSVLNSSPCRCI*LHHWVSEAQSA Trigger: TGCAGATTGAGCCTCTGAAACCCAGTGATGAAGGCAGATACACCTGCAAGGTGAAGAATTCAGGACGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS TCA 72 bp | CACTTTCAAGATGACATGGCTCCAGACATAGCGTCCTaGATTCTTCACCTTGCAGGTGTATCTGCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: HFQDDMAPDIAS*ILHLAGVSAFI Trigger: GATGAAGGCAGATACACCTGCAAGGTGAAGAATTCAGGACGCTATGTCTGGAGCCATGTCATCTTGAAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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| CDS CAA 72 bp | GTAGACATGACGGCTGGAATACGTAATAACCACTTTTaGGTTCCCTTCATTATCGGTGAGCAGCCATTCAAT | + |
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Preference number: 6 (lower is better) Translates to: VDMTAGIRNNHF*VPFIIGEQPFN Trigger: ATTGAATGGCTGCTCACCGATAATGAAGGGAACCAAAAAGTGGTTATTACGTATTCCAGCCGTCATGTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034522.8 |
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