Pregenerated sensors for CLK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020385Ensembl transcript IDs: ENSMUST00000093132.13, ENSMUST00000109111.2, ENSMUST00000109113.8, ENSMUST00000126131.8, ENSMUST00000130641.8, ENSMUST00000148053.2, ENSMUST00000153414.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTCTATTACGCTTTCTCTTAGGGCTGCTTCTCCTGCTCCTGACTaGGGATTTACTGCAATGGATCCGGTAAGTGCTTTCAACGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GSITLSLRAASPAPD*GFTAMDPVSAFNVS Trigger: AGAGACGTTGAAAGCACTTACCGGATCCATTGCAGTAAATCCTCAGTCAGGAGCAGGAGAAGCAGCCCTAAGAGAAAGCGTAATAGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
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| 3UTR-3UTR GCA 90 bp | CATGTAAGCCATCCCGTGATCAATGCACTCTACAACTTTGCCAAAGGCTCCTTCATGCGACTGATGACTTaGACAGGGTCTATTACGCTT | + |
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Preference number: 2 (lower is better) Translates to: HVSHPVINALYNFAKGSFMRLMT*TGSITL Trigger: AAGCGTAATAGACCCTGTGCAAGTCATCAGTCGCAT...GAAGGAGCCTTTGGCAAAGTTGTAGAGTGCATTGATCACGGGATGGCTTACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126131.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACGAAGGTTTAGTTGACTaGCACAGTCTGGAAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: RVNLHVQKMGPITFITGHEGLVD*HSLEVT Trigger: AGTTACTTCCAGACTGTGTCAGTCAACTAAACCTTC...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACGAAGGTTTAGTTGACTaGCACAGTCTGGAAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHEGLVD*HSLEVT Trigger: AGTTACTTCCAGACTGTGTCAGTCAACTAAACCTTC...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACATTAGAAGGTTTAGTTaGCTGACACAGTCTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: RVNLHVQKMGPITFITGHIRRFS*LTQSGS Trigger: ACTTCCAGACTGTGTCAGTCAACTAAACCTTCTAAT...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGATTAGAAGGTTTAGTTaGCTGACACAGTCTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TSESTFMYKRWDQSRLSLIRRFS*LTQSGS Trigger: ACTTCCAGACTGTGTCAGTCAACTAAACCTTCTAAT...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAGAAGGTTTAGTTGACTaGCACAGTCTGGAAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: KITSESTFMYKRWDQSRLEGLVD*HSLEVT Trigger: AGTTACTTCCAGACTGTGTCAGTCAACTAAACCTTC...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| 3UTR GCA 72 bp | AAGTGTCCACGATTTCATCGAATGCGACTGATGACTTaGACAGGGTCTATTACGCTTTCTCTTAGGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: KCPRFHRMRLMT*TGSITLSLRAA Trigger: AGCAGCCCTAAGAGAAAGCGTAATAGACCCTGTGCAAGTCATCAGTCGCATTCGATGAAATCGTGGACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 |
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| 3UTR CCA 72 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATaGGACCAATCACGTTTATCACTGGACACAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: KITSESTFMYKR*DQSRLSLDTKG Trigger: GCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATGATTTCAGAACGAGCTaGCTCCCGGTAACGGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: LHVQKMGPITFITGHKGHDFRTS*LPVTAY Trigger: GTAGGCCGTTACCGGGAGGCAGCTCGTTCTGAAATC...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCGATTTCAGAACGAGCTaGCTCCCGGTAACGGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFDFRTS*LPVTAY Trigger: GTAGGCCGTTACCGGGAGGCAGCTCGTTCTGAAATC...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | TCCACGATTTCATCGAATGCGACTGATGACTTGCACAGGGTCTATTACGCTTTCTGTTCTCCTGAGTACTaGTGTGAGACCTTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: STISSNATDDLHRVYYAFCSPEY*CETFSC Trigger: GCAAGAGAAGGTCTCACAGCAGTACTCAGGAGAACA...GAAAGCGTAATAGACCCTGTGCAAGTCATCAGTCGCATTCGATGAAATCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 |
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| CDS-3UTR GCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACCTCCCAGCTGAACTATaGTCGTCCCAATCTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RVNLHVQKMGPITFITGHLPAEL*SSQSSW Trigger: CCAGCTAGATTGGGACGAGCATAGTTCAGCTGGGAG...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATCTCCCAGCTGAACTATaGTCGTCCCAATCTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LHVQKMGPITFITGHKGHLPAEL*SSQSSW Trigger: CCAGCTAGATTGGGACGAGCATAGTTCAGCTGGGAG...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAACCTAGAGCCAAAATaGCCTCTGGAGCCCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: RVNLHVQKMGPITFITGHNLEPK*PLEPCS Trigger: ACTACAGGGCTCCAGAGGTCATTTTGGCTCTAGGTT...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR CCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCAGCCAAAATGACCTCTaGAGCCCTGTAGTGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFSQNDL*SPVVPC Trigger: ACAAGGCACTACAGGGCTCCAGAGGTCATTTTGGCT...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR CCA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACATCATATGTGCTGGGATaGGTCCTAAGATCCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTSYVLG*VLRSAP Trigger: TGGAGCGGATCTTAGGACCCATCCCAGCACATATGA...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACTCTCCTGCTCCTGACTaGGGATTTACTGCAATGGAT | + |
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Preference number: 4 (lower is better) Translates to: RVNLHVQKMGPITFITGHSPAPD*GFTAMD Trigger: ATCCATTGCAGTAAATCCTCAGTCAGGAGCAGGAGA...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
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| CDS-3UTR TCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTGCTTCTCCTGCTCCTaGCTGAGGATTTACTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFCFSCS*LRIYCN Trigger: ATTGCAGTAAATCCTCAGTCAGGAGCAGGAGAAGCA...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
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| CDS-3UTR TCA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATCAAACATCACAAGGCTaGGACCAACCTAGAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LHVQKMGPITFITGHKGHQTSQG*DQPRAK Trigger: TTTGGCTCTAGGTTGGTCTCAGCCTTGTGATGTTTG...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACGGGTCTGAAAGACTGTaGACCCAAGGTAGTACTCAA | + |
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Preference number: 4 (lower is better) Translates to: RVNLHVQKMGPITFITGHGSERL*TQGSTQ Trigger: TTGAGTACTACCTTGGGTTCACAGTCTTTCAGACCC...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCGGGTCTGAAAGACTGTaGACCCAAGGTAGTACTCAA | + |
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Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFGSERL*TQGSTQ Trigger: TTGAGTACTACCTTGGGTTCACAGTCTTTCAGACCC...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTTACTATCGTGGGTCTaGAAGACTGTGAACCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LHVQKMGPITFITGHKGHLLSWV*KTVNPR Trigger: CCTTGGGTTCACAGTCTTTCAGACCCACGATAGTAA...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTGTTCTCCTGAGTACTaGTGTGAGACCTTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LHVQKMGPITFITGHKGHCSPEY*CETFSC Trigger: GCAAGAGAAGGTCTCACAGCAGTACTCAGGAGAACA...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
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| CDS-3UTR GCA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATCACTGTTGGGGTCAGTaGTGTTCAAGTGCTCCAATA | + |
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Preference number: 4 (lower is better) Translates to: LHVQKMGPITFITGHKGHHCWGQ*CSSAPI Trigger: TATTGGAGCACTTGAACAGCACTGACCCCAACAGTG...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTCCATCATTGCCAGGTaGTCTTTACTATCGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFSIIAR*SLLSWV Trigger: GACCCACGATAGTAAAGAGCACCTGGCAATGATGGA...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCGAAAGGGTGCTGCAATaGTTCATCCAAGGTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFERVLQ*FIQGDP Trigger: AGGATCACCTTGGATGAAGCATTGCAGCACCCTTTC...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAGAAAGGGTGCTGCAATaGTTCATCCAAGGTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTERVLQ*FIQGDP Trigger: AGGATCACCTTGGATGAAGCATTGCAGCACCCTTTC...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR GCA 90 bp | GATCCGGTAAGTGCTTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTTCTCCTCTTCAACAGAGTaGGAAGCTTCAAGAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: DPVSAFNVSMVMSWNISFSSSTE*EASRGM Trigger: CATCCCTCTTGAAGCTTCGCACTCTGTTGAAGAGGA...GAAGGATATGTTCCAAGACATTACCATAGAGACGTTGAAAGCACTTACCGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
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| CDS-3UTR GCA 90 bp | ATGGATCCGGTAAGTGCTTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTCCTCTTCAACAGAGTaGGAAGCTTCAAGAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: MDPVSAFNVSMVMSWNISSSSTE*EASRGM Trigger: CATCCCTCTTGAAGCTTCGCACTCTGTTGAAGAGGA...GGATATGTTCCAAGACATTACCATAGAGACGTTGAAAGCACTTACCGGATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
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| CDS-3UTR CCA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAATCGGAAGACACTGTTaGGGTCAGTGCTGTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTIGRHC*GQCCSS Trigger: ACTTGAACAGCACTGACCCCAACAGTGTCTTCCGAT...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACATCGGAAGACACTGTTaGGGTCAGTGCTGTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: RVNLHVQKMGPITFITGHIGRHC*GQCCSS Trigger: ACTTGAACAGCACTGACCCCAACAGTGTCTTCCGAT...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR CCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACAGCCAAAATGACCTCTaGAGCCCTGTAGTGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHSQNDL*SPVVPC Trigger: ACAAGGCACTACAGGGCTCCAGAGGTCATTTTGGCT...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR CCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTCATATGTGCTGGGATaGGTCCTAAGATCCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHSYVLG*VLRSAP Trigger: TGGAGCGGATCTTAGGACCCATCCCAGCACATATGA...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | AAAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTTCCCAATCAGGACAGTaGGTTCGTTTGGAATGCCGC | + |
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Preference number: 4 (lower is better) Translates to: KNHFRVNLHVQKMGPITFSQSGQ*VRLECR Trigger: GCGGCATTCCAAACGAACTCACTGTCCTGATTGGGA...AAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
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| CDS-3UTR TCA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGAAGCCATCCATGCCGTaGTCAATGCACTCTACAACT | + |
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Preference number: 4 (lower is better) Translates to: TSESTFMYKRWDQSRLSLKPSMP*SMHSTT Trigger: AGTTGTAGAGTGCATTGATCACGGCATGGATGGCTT...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
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| CDS-3UTR TCA 90 bp | TACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTAAAAAACCTAGAGCCAAAATaGCCTCTGGAGCCCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: YKRWDQSRLSLDTKGILKNLEPK*PLEPCS Trigger: ACTACAGGGCTCCAGAGGTCATTTTGGCTCTAGGTT...TTTTAGAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGCAAACATCACAAGGCTaGGACCAACCTAGAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TSESTFMYKRWDQSRLSLQTSQG*DQPRAK Trigger: TTTGGCTCTAGGTTGGTCTCAGCCTTGTGATGTTTG...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACGGGTCTGAAAGACTGTaGACCCAAGGTAGTACTCAA | + |
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Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHGSERL*TQGSTQ Trigger: TTGAGTACTACCTTGGGTTCACAGTCTTTCAGACCC...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTTACTATCGTGGGTCTaGAAGACTGTGAACCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHLLSWV*KTVNPR Trigger: CCTTGGGTTCACAGTCTTTCAGACCCACGATAGTAA...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGTTACTATCGTGGGTCTaGAAGACTGTGAACCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TSESTFMYKRWDQSRLSLLLSWV*KTVNPR Trigger: CCTTGGGTTCACAGTCTTTCAGACCCACGATAGTAA...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR TCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACAACATATCTCCCAGCTaGACTATGCTCGTCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHNISPS*TMLVPI Trigger: GATTGGGACGAGCATAGTTCAGCTGGGAGATATGTT...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | TCCACGATTTCATCGAATGCGACTGATGACTTGCACAGGGTCTATTACGCTTTCGGAGCACCTTTAACTTaGAAATGCCTCTTCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: STISSNATDDLHRVYYAFGAPLT*KCLFLE Trigger: TTCTAAGAAGAGGCATTTTCAAGTTAAAGGTGCTCC...GAAAGCGTAATAGACCCTGTGCAAGTCATCAGTCGCATTCGATGAAATCGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148053.2 |
||
| CDS-3UTR GCA 90 bp | TGTATTCATCAATGTATCTCCGGTCCCGATAATCTCTCTCATTCAAGCATCTTGTGTTCTCCTGAGTACTaGTGTGAGACCTTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CIHQCISGPDNLSHSSILCSPEY*CETFSC Trigger: GCAAGAGAAGGTCTCACAGCAGTACTCAGGAGAACA...CAAGATGCTTGAATGAGAGAGATTATCGGGACCGGAGATACATTGATGAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACCCATGCCGTGATCAATaGACTCTACAACTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RVNLHVQKMGPITFITGHPCRDQ*TLQLCQ Trigger: TTGGCAAAGTTGTAGAGTGCATTGATCACGGCATGG...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
||
| CDS-3UTR GCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACCACTGTTGGGGTCAGTaGTGTTCAAGTGCTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHHCWGQ*CSSAPI Trigger: TATTGGAGCACTTGAACAGCACTGACCCCAACAGTG...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGATCCGCTCCATCATTaGCAGGTGCTCTTTACTATC | + |
|
Preference number: 4 (lower is better) Translates to: TSESTFMYKRWDQSRLSLDPLHH*QVLFTI Trigger: GATAGTAAAGAGCACCTGGCAATGATGGAGCGGATC...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACGATCCGCTCCATCATTaGCAGGTGCTCTTTACTATC | + |
|
Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHDPLHH*QVLFTI Trigger: GATAGTAAAGAGCACCTGGCAATGATGGAGCGGATC...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTACTCCCAGCTGAACTATaGTCGTCCCAATCTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLLPAEL*SSQSSW Trigger: CCAGCTAGATTGGGACGAGCATAGTTCAGCTGGGAG...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGAAAGGGTGCTGCAATaGTTCATCCAAGGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSESTFMYKRWDQSRLSLERVLQ*FIQGDP Trigger: AGGATCACCTTGGATGAAGCATTGCAGCACCCTTTC...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCAAAGAAAGGGTGCTaGAATGCTTCATCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHVQKMGPITFITGHKGHSKKGC*NASSKV Trigger: CACCTTGGATGAAGCATTGCAGCACCCTTTCTTTGA...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACTCAAAGAAAGGGTGCTaGAATGCTTCATCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVNLHVQKMGPITFITGHSKKGC*NASSKV Trigger: CACCTTGGATGAAGCATTGCAGCACCCTTTCTTTGA...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGCTTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTTCGCAGTAGTTCCTCTTCAACAGAGTaGGAAGCTTCAAGAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KCFQRLYGNVLEHILRSSSSSTE*EASRGM Trigger: CATCCCTCTTGAAGCTTCGCACTCTGTTGAAGAGGA...ACTACTGCGAAGGATATGTTCCAAGACATTACCATAGAGACGTTGAAAGCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CCA 90 bp | CATGTAAGCCATCCCGTGATCAATGCACTCTACAACTTTGCCAAAGGCTCCTTCTTTAAACTGATGATGTaGTTTACAGTGCCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVSHPVINALYNFAKGSFFKLMM*FTVPVL Trigger: GAGAACAGGCACTGTAAACCACATCATCAGTTTAAA...GAAGGAGCCTTTGGCAAAGTTGTAGAGTGCATTGATCACGGGATGGCTTACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126131.8 |
||
| CDS-3UTR CCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCAAGTGCTCCAATACTTaGATTTCAGAACGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFKCSNT*ISERAA Trigger: GGCAGCTCGTTCTGAAATCCAAGTATTGGAGCACTT...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACATCGGAAGACACTGTTaGGGTCAGTGCTGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHIGRHC*GQCCSS Trigger: ACTTGAACAGCACTGACCCCAACAGTGTCTTCCGAT...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCCCCTGTAGTGCCTTGTaGACACCAAAGTACTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFPCSAL*TPKYYD Trigger: ATCATAGTACTTTGGTGTCCACAAGGCACTACAGGG...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | AGGATTTACTGCAATGGATCCGGTAAGTGCTTTCAACGTCTCTATGGTAATGTCGGTAAACAGCCCCAATaGAACATCAATCCGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIYCNGSGKCFQRLYGNVGKQPQ*NINPSL Trigger: AAGACTCGGATTGATGTTCCATTGGGGCTGTTTACC...GACATTACCATAGAGACGTTGAAAGCACTTACCGGATCCATTGCAGTAAATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAACCTAGAGCCAAAATaGCCTCTGGAGCCCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNHFRVNLHVQKMGPITFNLEPK*PLEPCS Trigger: ACTACAGGGCTCCAGAGGTCATTTTGGCTCTAGGTT...AAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | TACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTAAAAAACATATCTCCCAGCTaGACTATGCTCGTCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: YKRWDQSRLSLDTKGILKNISPS*TMLVPI Trigger: GATTGGGACGAGCATAGTTCAGCTGGGAGATATGTT...TTTTAGAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTTCGCAGTAGTCATTTCTGTTCTCCTGAGTACTaGTGTGAGACCTTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQRLYGNVLEHILRSSHFCSPEY*CETFSC Trigger: GCAAGAGAAGGTCTCACAGCAGTACTCAGGAGAACA...GAAATGACTACTGCGAAGGATATGTTCCAAGACATTACCATAGAGACGTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGATGCGACTGATGACTTaGACAGGGTCTATTACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSESTFMYKRWDQSRLSLMRLMT*TGSITL Trigger: AAGCGTAATAGACCCTGTGCAAGTCATCAGTCGCAT...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
||
| CDS-3UTR GCA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGTCAAAGAAAGGGTGCTaGAATGCTTCATCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSESTFMYKRWDQSRLSLSKKGC*NASSKV Trigger: CACCTTGGATGAAGCATTGCAGCACCCTTTCTTTGA...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | TGTATTCATCAATGTATCTCCGGTCCCGATAATCTCTCTCATTCAAGCATCTTGAAGCTTCAAGAGGGATaGACATGGAGCACCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CIHQCISGPDNLSHSSILKLQEG*TWSTFN Trigger: GTTAAAGGTGCTCCATGTGCATCCCTCTTGAAGCTT...CAAGATGCTTGAATGAGAGAGATTATCGGGACCGGAGATACATTGATGAATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAAGCCAAAATGACCTCTaGAGCCCTGTAGTGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLSQNDL*SPVVPC Trigger: ACAAGGCACTACAGGGCTCCAGAGGTCATTTTGGCT...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTCGTCCCAATCTAGCTaGTTATGGTGGAAATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFSSQSS*LWWKYL Trigger: CAAGTATTTCCACCATAACCAGCTAGATTGGGACGA...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACTCGTCCCAATCTAGCTaGTTATGGTGGAAATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVNLHVQKMGPITFITGHSSQSS*LWWKYL Trigger: CAAGTATTTCCACCATAACCAGCTAGATTGGGACGA...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCTTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTTCGCAGTAGTGGTAAACAGCCCCAATaGAACATCAATCCGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCFQRLYGNVLEHILRSSGKQPQ*NINPSL Trigger: AAGACTCGGATTGATGTTCCATTGGGGCTGTTTACC...ACTACTGCGAAGGATATGTTCCAAGACATTACCATAGAGACGTTGAAAGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR TCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCGACACCAAAGTACTATaGTGTTCGTCGTCATATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFDTKVL*CSSSYV Trigger: AACATATGACGACGAACATCATAGTACTTTGGTGTC...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTACAAACATCACAAGGCTaGGACCAACCTAGAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLQTSQG*DQPRAK Trigger: TTTGGCTCTAGGTTGGTCTCAGCCTTGTGATGTTTG...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAACATATCTCCCAGCTaGACTATGCTCGTCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: KNHFRVNLHVQKMGPITFNISPS*TMLVPI Trigger: GATTGGGACGAGCATAGTTCAGCTGGGAGATATGTT...AAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTCATGCTCTTCGTCATaGCACAGCATAAATTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFSCSSS*HSINSF Trigger: AAAGGAATTTATGCTGTGTCATGACGAAGAGCATGA...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACATCATGCTCTTCGTCATaGCACAGCATAAATTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTSCSSS*HSINSF Trigger: AAAGGAATTTATGCTGTGTCATGACGAAGAGCATGA...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | AGGATTTACTGCAATGGATCCGGTAAGTGCTTTCAACGTCTCTATGGTAATGTCGGAGCACCTTTAACTTaGAAATGCCTCTTCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RIYCNGSGKCFQRLYGNVGAPLT*KCLFLE Trigger: TTCTAAGAAGAGGCATTTTCAAGTTAAAGGTGCTCC...GACATTACCATAGAGACGTTGAAAGCACTTACCGGATCCATTGCAGTAAATCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTACACTGTTGGGGTCAGTaGTGTTCAAGTGCTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLHCWGQ*CSSAPI Trigger: TATTGGAGCACTTGAACAGCACTGACCCCAACAGTG...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTTCCATCATTGCCAGGTaGTCTTTACTATCGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNHFRVNLHVQKMGPITFSIIAR*SLLSWV Trigger: GACCCACGATAGTAAAGAGCACCTGGCAATGATGGA...AAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCCATCATTGCCAGGTaGTCTTTACTATCGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLSIIAR*SLLSWV Trigger: GACCCACGATAGTAAAGAGCACCTGGCAATGATGGA...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAGATCCGCTCCATCATTaGCAGGTGCTCTTTACTATC | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLDPLHH*QVLFTI Trigger: GATAGTAAAGAGCACCTGGCAATGATGGAGCGGATC...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTTCGCAGTAGTCATTTCAAGCTTCAAGAGGGATaGACATGGAGCACCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FQRLYGNVLEHILRSSHFKLQEG*TWSTFN Trigger: GTTAAAGGTGCTCCATGTGCATCCCTCTTGAAGCTT...GAAATGACTACTGCGAAGGATATGTTCCAAGACATTACCATAGAGACGTTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACATCTAGCTGGTTATGGTaGAAATACTTGCGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTSSWLW*KYLRFL Trigger: AAGGAAACGCAAGTATTTCCACCATAACCAGCTAGA...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAGATAAGCCATTTGCCTaGTGTGATCAATTTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTDKPFA*CDQFEM Trigger: CATTTCAAATTGATCACATCAGGCAAATGGCTTATC...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCCTGTGTTTTTCAATGTaGGCTCATCTCGTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFLCFSM*AHLVSF Trigger: AAATGAAACGAGATGAGCGCACATTGAAAAACACAG...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACACTGTGTTTTTCAATGTaGGCTCATCTCGTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTLCFSM*AHLVSF Trigger: AAATGAAACGAGATGAGCGCACATTGAAAAACACAG...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTTCGTCGTCATATGTTaGACTTCCAAAATCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFFVVIC*TSKINN Trigger: GTTGTTGATTTTGGAAGTGCAACATATGACGACGAA...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTTCGCAGTAGTCTTTAAACTGATGATGTaGTTTACAGTGCCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAFNVSMVMSWNISFAVVFKLMM*FTVPVL Trigger: GAGAACAGGCACTGTAAACCACATCATCAGTTTAAA...GACTACTGCGAAGGATATGTTCCAAGACATTACCATAGAGACGTTGAAAGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACCAATCTAGCTGGTTATaGTGGAAATACTTGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHQSSWL*WKYLRF Trigger: GAAACGCAAGTATTTCCACCATAACCAGCTAGATTG...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | TACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTAAAAGACACCAAAGTACTATaGTGTTCGTCGTCATATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YKRWDQSRLSLDTKGILKDTKVL*CSSSYV Trigger: AACATATGACGACGAACATCATAGTACTTTGGTGTC...TTTTAGAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCTTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTTCGCAGTAGTTTTAAACTGATGATGTaGTTTACAGTGCCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KCFQRLYGNVLEHILRSSFKLMM*FTVPVL Trigger: GAGAACAGGCACTGTAAACCACATCATCAGTTTAAA...ACTACTGCGAAGGATATGTTCCAAGACATTACCATAGAGACGTTGAAAGCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126131.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAGACACCAAAGTACTATaGTGTTCGTCGTCATATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLDTKVL*CSSSYV Trigger: AACATATGACGACGAACATCATAGTACTTTGGTGTC...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCATGCTCTTCGTCATaGCACAGCATAAATTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLSCSSS*HSINSF Trigger: AAAGGAATTTATGCTGTGTCATGACGAAGAGCATGA...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTAAAACTGTGTTTTTCAATGTaGGCTCATCTCGTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YKRWDQSRLSLDTKGILKLCFSM*AHLVSF Trigger: AAATGAAACGAGATGAGCGCACATTGAAAAACACAG...TTTTAGAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTACAATCTAGCTGGTTATaGTGGAAATACTTGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLQSSWL*WKYLRF Trigger: GAAACGCAAGTATTTCCACCATAACCAGCTAGATTG...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATTCGTCGTCATATGTTaGACTTCCAAAATCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLFVVIC*TSKINN Trigger: GTTGTTGATTTTGGAAGTGCAACATATGACGACGAA...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATTTAAACTGATGATGTaGTTTACAGTGCCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KITSESTFMYKRWDQSRLFKLMM*FTVPVL Trigger: GAGAACAGGCACTGTAAACCACATCATCAGTTTAAA...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
||
| CDS GCA 90 bp | GTTTACAGTGCCTGTTCTCCTGAGTACTGCTGTGAGACCTTCTCTTaGGTTTGTGACTTCCACTGTAGCTTTCATGGCCCCAGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VYSACSPEYCCETFS*VCDFHCSFHGPSFL Trigger: GAGAAAGCTGGGGCCATGAAAGCTACAGTGGAAGTCACAAACGCAAGAGAAGGTCTCACAGCAGTACTCAGGAGAACAGGCACTGTAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
||
| CDS GCA 90 bp | TTTAACGGCTTGCAGCGTCTCCTAACATATCTCCCAGCTGAACTATaGTCGTCCCAATCTAGCTGGTTATGGTGGAAATACTTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FNGLQRLLTYLPAEL*SSQSSWLWWKYLRF Trigger: GAAACGCAAGTATTTCCACCATAACCAGCTAGATTGGGACGAGCATAGTTCAGCTGGGAGATATGTTAGGAGACGCTGCAAGCCGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS GCA 90 bp | TGGGATGAGTGTCCTCTTCAACAGAGTGCGAAGCTTCAAGAGGGATaGACATGGAGCACCTTTAACTTGAAAATGCCTCTTCTTAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: WDECPLQQSAKLQEG*TWSTFNLKMPLLRI Trigger: GATTCTAAGAAGAGGCATTTTCAAGTTAAAGGTGCTCCATGTGCATCCCTCTTGAAGCTTCGCACTCTGTTGAAGAGGACACTCATCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS CCA 90 bp | AACAGCCCCAATGGAACATCAATCCGAGTCTTTAAACTGATGATGTaGTTTACAGTGCCTGTTCTCCTGAGTACTGCTGTGAGACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSPNGTSIRVFKLMM*FTVPVLLSTAVRPS Trigger: AGAAGGTCTCACAGCAGTACTCAGGAGAACAGGCACTGTAAACCACATCATCAGTTTAAAGACTCGGATTGATGTTCCATTGGGGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000126131.8 ENSMUST00000130641.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACGAGCCCTGTAGTGCCTaGTGGACACCAAAGTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: RVNLHVQKMGPITFITGHEPCSA*WTPKYY Trigger: ATAGTACTTTGGTGTCCACAAGGCACTACAGGGCTC...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS CCA 90 bp | ACATATCTCCCAGCTGAACTATGCTCGTCCCAATCTAGCTGGTTATaGTGGAAATACTTGCGTTTCCTTGTCTTCTGGATCATATGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TYLPAELCSSQSSWL*WKYLRFLVFWIICA Trigger: AGCACATATGATCCAGAAGACAAGGAAACGCAAGTATTTCCACCATAACCAGCTAGATTGGGACGAGCATAGTTCAGCTGGGAGATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS CCA 90 bp | CTCCTAACATATCTCCCAGCTGAACTATGCTCGTCCCAATCTAGCTaGTTATGGTGGAAATACTTGCGTTTCCTTGTCTTCTGGATCATA | + |
|
Preference number: 5 (lower is better) Translates to: LLTYLPAELCSSQSS*LWWKYLRFLVFWII Trigger: TATGATCCAGAAGACAAGGAAACGCAAGTATTTCCACCATAACCAGCTAGATTGGGACGAGCATAGTTCAGCTGGGAGATATGTTAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS CCA 90 bp | GAGTGTCCTCTTCAACAGAGTGCGAAGCTTCAAGAGGGATGCACATaGAGCACCTTTAACTTGAAAATGCCTCTTCTTAGAATCTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ECPLQQSAKLQEGCT*STFNLKMPLLRIYS Trigger: AGAGTAGATTCTAAGAAGAGGCATTTTCAAGTTAAAGGTGCTCCATGTGCATCCCTCTTGAAGCTTCGCACTCTGTTGAAGAGGACACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CAA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATCAAGTGCTCCAATACTaGGATTTCAGAACGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHVQKMGPITFITGHKGHQVLQY*DFRTSC Trigger: GCAGCTCGTTCTGAAATCCAAGTATTGGAGCACTTG...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCAGATCCGCTCCATCATaGCCAGGTGCTCTTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFRSAPS*PGALYY Trigger: ATAGTAAAGAGCACCTGGCAATGATGGAGCGGATCT...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAGATCCGCTCCATCATaGCCAGGTGCTCTTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTRSAPS*PGALYY Trigger: ATAGTAAAGAGCACCTGGCAATGATGGAGCGGATCT...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATAGATCCGCTCCATCATaGCCAGGTGCTCTTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: LHVQKMGPITFITGHKGHRSAPS*PGALYY Trigger: ATAGTAAAGAGCACCTGGCAATGATGGAGCGGATCT...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCCACGATTTCATCGAATGCGACTGATGACTTGCACAGGGTCTATTACGCTTGGAGCACCTTTAACTaGAAAATGCCTCTTCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSTISSNATDDLHRVYYAWSTFN*KMPLLR Trigger: TCTAAGAAGAGGCATTTTCAAGTTAAAGGTGCTCCA...AGCGTAATAGACCCTGTGCAAGTCATCAGTCGCATTCGATGAAATCGTGGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148053.2 |
||
| CDS-3UTR CAA 90 bp | TCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCCCACGATTTCATATCTaGCTCTTAGAACGTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SCTKDGTNHVYHWTQRAFPRFHI*LLERLH Trigger: GTGGAGACGTTCTAAGAGCAAGATATGAAATCGTGG...GAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
||
| CDS-3UTR CAA 90 bp | ATGGATCCGGTAAGTGCTTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCGCCACAGGCAAAGATTaGTACACAAAGACCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MDPVSAFNVSMVMSWNISATGKD*YTKTLF Trigger: AAACAGGGTCTTTGTGTACAAATCTTTGCCTGTGGC...GGATATGTTCCAAGACATTACCATAGAGACGTTGAAAGCACTTACCGGATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CAA 90 bp | AGGATTTACTGCAATGGATCCGGTAAGTGCTTTCAACGTCTCTATGGTAATGTCGCCACAGGCAAAGATTaGTACACAAAGACCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RIYCNGSGKCFQRLYGNVATGKD*YTKTLF Trigger: AAACAGGGTCTTTGTGTACAAATCTTTGCCTGTGGC...GACATTACCATAGAGACGTTGAAAGCACTTACCGGATCCATTGCAGTAAATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAGAGCCCTGTAGTGCCTaGTGGACACCAAAGTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: KITSESTFMYKRWDQSRLEPCSA*WTPKYY Trigger: ATAGTACTTTGGTGTCCACAAGGCACTACAGGGCTC...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACTTATGGTGGAAATACTaGCGTTTCCTTGTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVNLHVQKMGPITFITGHLWWKY*RFLVFW Trigger: CCAGAAGACAAGGAAACGCAAGTATTTCCACCATAA...GTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATAATTCCTTTAACGGCTaGCAGCGTCTCCTAACATAT | + |
|
Preference number: 5 (lower is better) Translates to: LHVQKMGPITFITGHKGHNSFNG*QRLLTY Trigger: ATATGTTAGGAGACGCTGCAAGCCGTTAAAGGAATT...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAATTCCTTTAACGGCTaGCAGCGTCTCCTAACATAT | + |
|
Preference number: 5 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTNSFNG*QRLLTY Trigger: ATATGTTAGGAGACGCTGCAAGCCGTTAAAGGAATT...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAATGCGACTGATGACTaGCACAGGGTCTATTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: KNHFRVNLHVQKMGPITFNATDD*HRVYYA Trigger: AGCGTAATAGACCCTGTGCAAGTCATCAGTCGCATT...AAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
||
| CDS-3UTR CAA 90 bp | AAAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTCAAGTGCTCCAATACTaGGATTTCAGAACGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KNHFRVNLHVQKMGPITFQVLQY*DFRTSC Trigger: GCAGCTCGTTCTGAAATCCAAGTATTGGAGCACTTG...AAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTACAAGTGCTCCAATACTaGGATTTCAGAACGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KITSESTFMYKRWDQSRLQVLQY*DFRTSC Trigger: GCAGCTCGTTCTGAAATCCAAGTATTGGAGCACTTG...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAGTTCGTCGTCATATGTaGCACTTCCAAAATCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: ESTFMYKRWDQSRLSLDTVRRHM*HFQNQQ Trigger: TTGTTGATTTTGGAAGTGCAACATATGACGACGAAC...TGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | CTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATAATACTTGCGTTTCCTaGTCTTCTGGATCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHVQKMGPITFITGHKGHNTCVS*SSGSYV Trigger: CACATATGATCCAGAAGACAAGGAAACGCAAGTATT...ATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | ATGGATCCGGTAAGTGCTTTCAACGTCTCTATGGTAATGTCTTGGAACATATCCTGGAGCACCTTTAACTaGAAAATGCCTCTTCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: MDPVSAFNVSMVMSWNISWSTFN*KMPLLR Trigger: TCTAAGAAGAGGCATTTTCAAGTTAAAGGTGCTCCA...GGATATGTTCCAAGACATTACCATAGAGACGTTGAAAGCACTTACCGGATCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACTGGTTCGTCGTCATATGTaGCACTTCCAAAATCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: TSESTFMYKRWDQSRLSLVRRHM*HFQNQQ Trigger: TTGTTGATTTTGGAAGTGCAACATATGACGACGAAC...CAGTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | TCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTATCACAATACTTGCGTTTCCTaGTCTTCTGGATCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLQSQPSCTKDGTNHVYHNTCVS*SSGSYV Trigger: CACATATGATCCAGAAGACAAGGAAACGCAAGTATT...GTGATAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | TACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTAAAATTATGGTGGAAATACTaGCGTTTCCTTGTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YKRWDQSRLSLDTKGILKLWWKY*RFLVFW Trigger: CCAGAAGACAAGGAAACGCAAGTATTTCCACCATAA...TTTTAGAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | TACAAAAGATGGGACCAATCACGTTTATCACTGGACACAAAGGGCATTCTAAAAAATTCCTTTAACGGCTaGCAGCGTCTCCTAACATAT | + |
|
Preference number: 5 (lower is better) Translates to: YKRWDQSRLSLDTKGILKNSFNG*QRLLTY Trigger: ATATGTTAGGAGACGCTGCAAGCCGTTAAAGGAATT...TTTTAGAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATCTTTTGTA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTTTATGGTGGAAATACTaGCGTTTCCTTGTCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: KNHFRVNLHVQKMGPITFLWWKY*RFLVFW Trigger: CCAGAAGACAAGGAAACGCAAGTATTTCCACCATAA...AAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS-3UTR CAA 90 bp | AAAATCACTTCAGAGTCAACCTTCATGTACAAAAGATGGGACCAATCACGTTTAGTTCGTCGTCATATGTaGCACTTCCAAAATCAACAA | + |
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Preference number: 5 (lower is better) Translates to: KITSESTFMYKRWDQSRLVRRHM*HFQNQQ Trigger: TTGTTGATTTTGGAAGTGCAACATATGACGACGAAC...TAAACGTGATTGGTCCCATCTTTTGTACATGAAGGTTGACTCTGAAGTGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS GCA 72 bp | GCCTGTTCTCCTGAGTACTGCTGTGAGACCTTCTCTTaGGTTTGTGACTTCCACTGTAGCTTTCATGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: ACSPEYCCETFS*VCDFHCSFHGP Trigger: GGGGCCATGAAAGCTACAGTGGAAGTCACAAACGCAAGAGAAGGTCTCACAGCAGTACTCAGGAGAACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093132.13 |
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| CDS CCA 72 bp | ACCACTCTAGCATCTGGACGCATCGGAAGACACTGTTaGGGTCAGTGCTGTTCAAGTGCTCCAATACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: TTLASGRIGRHC*GQCCSSAPILG Trigger: TCCAAGTATTGGAGCACTTGAACAGCACTGACCCCAACAGTGTCTTCCGATGCGTCCAGATGCTAGAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS CAA 72 bp | AACCACTCTAGCATCTGGACGCATCGGAAGACACTGTaGGGGTCAGTGCTGTTCAAGTGCTCCAATACTTGG | + |
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Preference number: 6 (lower is better) Translates to: NHSSIWTHRKTL*GSVLFKCSNTW Trigger: CCAAGTATTGGAGCACTTGAACAGCACTGACCCCAACAGTGTCTTCCGATGCGTCCAGATGCTAGAGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS GCA 72 bp | TTTCCTTCGGTGGCTCTTCGAATGCGACTGATGACTTaGACAGGGTCTATTACGCTTTCTCTTAGGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FPSVALRMRLMT*TGSITLSLRAA Trigger: AGCAGCCCTAAGAGAAAGCGTAATAGACCCTGTGCAAGTCATCAGTCGCATTCGAAGAGCCACCGAAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093132.13 ENSMUST00000130641.8 |
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| CDS GCA 72 bp | GATGATGTGGTTTACAGTGCCTGTTCTCCTGAGTACTaGTGTGAGACCTTCTCTTGCGTTTGTGACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: DDVVYSACSPEY*CETFSCVCDFH Trigger: GTGGAAGTCACAAACGCAAGAGAAGGTCTCACAGCAGTACTCAGGAGAACAGGCACTGTAAACCACATCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000093132.13 ENSMUST00000126131.8 ENSMUST00000130641.8 ENSMUST00000148053.2 ENSMUST00000153414.8 |
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| CDS CAA 90 bp | GCTGAACTATGCTCGTCCCAATCTAGCTGGTTATGGTGGAAATACTaGCGTTTCCTTGTCTTCTGGATCATATGTGCTGGGATGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AELCSSQSSWLWWKY*RFLVFWIICAGMGP Trigger: AGGACCCATCCCAGCACATATGATCCAGAAGACAAGGAAACGCAAGTATTTCCACCATAACCAGCTAGATTGGGACGAGCATAGTTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS TCA 72 bp | CGAACCAGGTCAAACAGCTTCTCATGCTCTTCGTCATaGCACAGCATAAATTCCTTTAACGGCTTGCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: RTRSNSFSCSSS*HSINSFNGLQR Trigger: ACGCTGCAAGCCGTTAAAGGAATTTATGCTGTGTCATGACGAAGAGCATGAGAAGCTGTTTGACCTGGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS GCA 72 bp | TTGCAGCGTCTCCTAACATATCTCCCAGCTGAACTATaGTCGTCCCAATCTAGCTGGTTATGGTGGAAATAC | + |
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Preference number: 6 (lower is better) Translates to: LQRLLTYLPAEL*SSQSSWLWWKY Trigger: GTATTTCCACCATAACCAGCTAGATTGGGACGAGCATAGTTCAGCTGGGAGATATGTTAGGAGACGCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS CCA 72 bp | CCAGCTGAACTATGCTCGTCCCAATCTAGCTGGTTATaGTGGAAATACTTGCGTTTCCTTGTCTTCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: PAELCSSQSSWL*WKYLRFLVFWI Trigger: GATCCAGAAGACAAGGAAACGCAAGTATTTCCACCATAACCAGCTAGATTGGGACGAGCATAGTTCAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS CAA 72 bp | TGCTCGTCCCAATCTAGCTGGTTATGGTGGAAATACTaGCGTTTCCTTGTCTTCTGGATCATATGTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CSSQSSWLWWKY*RFLVFWIICAG Trigger: CCCAGCACATATGATCCAGAAGACAAGGAAACGCAAGTATTTCCACCATAACCAGCTAGATTGGGACGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS GCA 72 bp | TGTCCTCTTCAACAGAGTGCGAAGCTTCAAGAGGGATaGACATGGAGCACCTTTAACTTGAAAATGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: CPLQQSAKLQEG*TWSTFNLKMPL Trigger: AAGAGGCATTTTCAAGTTAAAGGTGCTCCATGTGCATCCCTCTTGAAGCTTCGCACTCTGTTGAAGAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
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| CDS CCA 72 bp | TATCTCCCAGCTGAACTATGCTCGTCCCAATCTAGCTaGTTATGGTGGAAATACTTGCGTTTCCTTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YLPAELCSSQSS*LWWKYLRFLVF Trigger: GAAGACAAGGAAACGCAAGTATTTCCACCATAACCAGCTAGATTGGGACGAGCATAGTTCAGCTGGGAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS CCA 72 bp | CTTCAACAGAGTGCGAAGCTTCAAGAGGGATGCACATaGAGCACCTTTAACTTGAAAATGCCTCTTCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: LQQSAKLQEGCT*STFNLKMPLLR Trigger: TCTAAGAAGAGGCATTTTCAAGTTAAAGGTGCTCCATGTGCATCCCTCTTGAAGCTTCGCACTCTGTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
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| CDS CAA 72 bp | AATCTAGCTGGTTATGGTGGAAATACTTGCGTTTCCTaGTCTTCTGGATCATATGTGCTGGGATGGGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: NLAGYGGNTCVS*SSGSYVLGWVL Trigger: TAGGACCCATCCCAGCACATATGATCCAGAAGACAAGGAAACGCAAGTATTTCCACCATAACCAGCTAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093132.13 ENSMUST00000109111.2 ENSMUST00000109113.8 |
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| CDS CAA 72 bp | AAGCTTCAAGAGGGATGCACATGGAGCACCTTTAACTaGAAAATGCCTCTTCTTAGAATCTACTCTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: KLQEGCTWSTFN*KMPLLRIYSQE Trigger: TTCCTGAGAGTAGATTCTAAGAAGAGGCATTTTCAAGTTAAAGGTGCTCCATGTGCATCCCTCTTGAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148053.2 ENSMUST00000153414.8 |
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