Pregenerated sensors for CLK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032316Ensembl transcript IDs: ENSMUST00000065330.8, ENSMUST00000215158.2, ENSMUST00000215233.2, ENSMUST00000215333.2, ENSMUST00000217409.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGGATCTTGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTaGTGGGTGGGTAGAAATCACCTCTGCAAAATGCACTTGTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: VGSCWVGTSTPHAKF*WVGRNHLCKMHLSR Trigger: CCTGGACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR CCA 90 bp | ACAGAACAGCCACTCATTTCCTTTCATGCTCAGAACTTAGGCTACTaGGTGGGATCTTGCTGGGTTGGTACCTCTACCCCACATGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: TEQPLISFHAQNLGY*VGSCWVGTSTPHAK Trigger: CTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCACCCAGTAGCCTAAGTTCTGAGCATGAAAGGAAATGAGTGGCTGTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR TCA 90 bp | AAATCACCTCTGCAAAATGCACTTGTCCAGGTACCAAATTACAGTTaGCAGGCCTCCTTAGTCACATCTAGGTCTTCCCTCCCCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: KSPLQNALVQVPNYS*QASLVTSRSSLPLP Trigger: AGGCAGGGGGAGGGAAGACCTAGATGTGACTAAGGAGGCCTGTCAACTGTAATTTGGTACCTGGACAAGTGCATTTTGCAGAGGTGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR CCA 90 bp | CTTGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGTaGGTAGAAATCACCTCTGCAAAATGCACTTGTCCAGGTACCAAA | + |
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Preference number: 1 (lower is better) Translates to: LAGLVPLPHMQSSDG*VEITSAKCTCPGTK Trigger: TTTGGTACCTGGACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR GCA 90 bp | CACATGCAAAGTTCTGATGGGTGGGTAGAAATCACCTCTGCAAAATaGACTTGTCCAGGTACCAAATTACAGTTGACAGGCCTCCTTAGT | + |
|
Preference number: 1 (lower is better) Translates to: HMQSSDGWVEITSAK*TCPGTKLQLTGLLS Trigger: ACTAAGGAGGCCTGTCAACTGTAATTTGGTACCTGGACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCGGTGGCTCTGGCTCTaGGGCCAGTGGGAGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WRKGASSPVQLSNSSCAGRWLWL*GQWERL Trigger: CAGCCTCTCCCACTGGCCTCAGAGCCAGAGCCACCG...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGGCCAATGTGATGCGCTaGGCAGGGTCGAACTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: RKGASSPVQLSNSSCAGLANVMR*AGSNSN Trigger: GTTAGAGTTCGACCCTGCTCAGCGCATCACATTGGC...CAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATCTTGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGTGGGCCAGTGGGAGAGGCTaGAGAAAAGGGGCCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: WDLAGLVPLPHMQSSDGWASGRG*RKGASS Trigger: GCTGCTGGCCCCTTTTCTCCAGCCTCTCCCACTGGC...CCACCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCCACATGCAAAGTTCTaGTGGGTGGGTAGAAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: WRKGASSPVQLSNSSCAGPHAKF*WVGRNH Trigger: GTGATTTCTACCCACCCATCAGAACTTTGCATGTGG...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGGATCTTGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGGGTAGAAATCACCTCTaGAAAATGCACTTGTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GWDLAGLVPLPHMQSSDGGRNHL*KMHLSR Trigger: CCTGGACAAGTGCATTTTGCAGAGGTGATTTCTACC...CCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR CAA 90 bp | ACTCATTTCCTTTCATGCTCAGAACTTAGGCTACTGGGTGGGATCTaGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: THFLSCSELRLLGGI*LGWYLYPTCKVLMG Trigger: ACCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCACCCAGTAGCCTAAGTTCTGAGCATGAAAGGAAATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR CAA 90 bp | TCAGACATCAGGACACAAAGGAACTTATTTTCCTTGTCTTTCTCCTaGATTTTCTTGAGAACATTAATTTCTAGACGAGCAGCTTCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: SDIRTQRNLFSLSFS*IFLRTLISRRAASR Trigger: TCGGGAAGCTGCTCGTCTAGAAATTAATGTTCTCAAGAAAATCAAGGAGAAAGACAAGGAAAATAAGTTCCTTTGTGTCCTGATGTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
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| 3UTR CCA 72 bp | CCACTCATTTCCTTTCATGCTCAGAACTTAGGCTACTaGGTGGGATCTTGCTGGGTTGGTACCTCTACCCCA | + |
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Preference number: 3 (lower is better) Translates to: PLISFHAQNLGY*VGSCWVGTSTP Trigger: TGGGGTAGAGGTACCAACCCAGCAAGATCCCACCCAGTAGCCTAAGTTCTGAGCATGAAAGGAAATGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR TCA 72 bp | TGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTaGTGGGTGGGTAGAAATCACCTCTGCAAAATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CWVGTSTPHAKF*WVGRNHLCKMH Trigger: GTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR GCA 72 bp | TTTCATGCTCAGAACTTAGGCTACTGGGTGGGATCTTaGTGGGTTGGTACCTCTACCCCACATGCAAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FHAQNLGYWVGS*WVGTSTPHAKF Trigger: GAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCACCCAGTAGCCTAAGTTCTGAGCATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR TCA 72 bp | CTGCAAAATGCACTTGTCCAGGTACCAAATTACAGTTaGCAGGCCTCCTTAGTCACATCTAGGTCTTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQNALVQVPNYS*QASLVTSRSSL Trigger: GAGGGAAGACCTAGATGTGACTAAGGAGGCCTGTCAACTGTAATTTGGTACCTGGACAAGTGCATTTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR CCA 72 bp | TTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGTaGGTAGAAATCACCTCTGCAAAATGCACTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVPLPHMQSSDG*VEITSAKCTCP Trigger: TGGACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| 3UTR TCA 72 bp | GGAGCTCAAAGGCGATGCACATATGACCATGGAAGTTaGACCAGTCAGACATCAGGACACAAAGGAACTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GAQRRCTYDHGS*TSQTSGHKGTY Trigger: ATAAGTTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGTCATATGTGCATCGCCTTTGAGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
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| CDS-3UTR GCA 90 bp | AGTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTGCCGCGGCCCAGCTGTaGTCGCCAGCCTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGRGWRKGASSPVQLSNSAAAQL*SPASSC Trigger: GCAGGAAGAGGCTGGCGAGCACAGCTGGGCCGCGGC...AGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTCAGACTCTGGGGGACTaGCCTGCCCCGCCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEAGEKGPAAQSSSPTLRQTLGD*PAPPGS Trigger: GGACCCTGGCGGGGCAGGCCAGTCCCCCAGAGTCTG...ACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACCTATGGCTTCTGGACCGTaGTCTCCGTGGGGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGQQPSPALQLFVCWPAPMASGP*SPWGRL Trigger: GAGCCTCCCCCACGGAGATCACGGTCCAGAAGCCAT...AGGTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR GCA 90 bp | AGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGAGGAACCCACCGGACTaGCAGGCTGGGGCCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKGASSPVQLSNSSCAGLRNPPD*QAGAAS Trigger: GGAAGCGGCCCCAGCCTGGCAGTCCGGTGGGTTCCT...CAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS-3UTR GCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACAGTGGTGGGCATGCTTaGGGGTACGGTACGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHSGGHA*GYGTAP Trigger: GGGCGCCGTACCGTACCCGCAAGCATGCCCACCACT...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCCGAACTCGCAGACTCTaGGGGACTGGCCTGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCRTRRL*GTGLPR Trigger: GCGGGGCAGGCCAGTCCCCCAGAGTCTGCGAGTTCG...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTTTCCGCTTCCGGCTCTaGCCTCCGCCCGTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEAGEKGPAAQSSSPTLRFRFRL*PPPVAA Trigger: TGCTGCCACGGGCGGAGGCCAGAGCCGGAAGCGGAA...ACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS-3UTR TCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACATGGCTTCTGGACCGTaGTCTCCGTGGGGGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHMASGP*SPWGRL Trigger: GAGCCTCCCCCACGGAGATCACGGTCCAGAAGCCAT...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCAGTGGTGGGCATGCTTaGGGGTACGGTACGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCSGGHA*GYGTAP Trigger: GGGCGCCGTACCGTACCCGCAAGCATGCCCACCACT...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR GCA 90 bp | AGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACCTGGCTGCTGCGCTTACTaGTCTGTTGGCTTCTCGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGQQPSPALQLFVCWPAPGCCAY*SVGFSR Trigger: CCTCGAGAAGCCAACAGAGCAGTAAGCGCAGCAGCC...AGGTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR GCA 90 bp | AGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACCTCCACCTTGCCAAAGGTaGCTTCACCCAGGTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RGQQPSPALQLFVCWPAPPPCQR*LHPGSP Trigger: TGGGGAACCTGGGTGAAGGCACCTTTGGCAAGGTGG...AGGTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACGCGGTAGCTCAGGTATaGGTCTGGCTCTGGGGAACG | + |
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Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHAVAQV*VWLWGT Trigger: CGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGC...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR TCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACCTTCAGGGCAACCTGTaGCTTCCCTCTGGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHLQGNL*LPSGMV Trigger: GACCATGCCAGAGGGAAGTCACAGGTTGCCCTGAAG...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR GCA 90 bp | GAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTCCACACTCCGGCTGCTaGGCTTACTGCTCTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: EKRGQQPSPALQLFVCWPPHSGC*AYCSVG Trigger: GCCAACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGG...AGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCCACACTCCGGCTGCTaGGCTTACTGCTCTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: EAGEKGPAAQSSSPTLRVPHSGC*AYCSVG Trigger: GCCAACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGG...CACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | AGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACCTGTCCTCTCCAAAAGATaGGCTCCGCTCTTCACACCG | + |
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Preference number: 4 (lower is better) Translates to: RGQQPSPALQLFVCWPAPVLSKR*APLFTP Trigger: CGGTGTGAAGAGCGGAGCCCATCTTTTGGAGAGGAC...AGGTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACATCCGGCACACCAGGTaGCCCTCCTTGTCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHIRHTR*PSLSSS Trigger: GGAAGATGACAAGGAGGGCCACCTGGTGTGCCGGAT...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | GAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTAAGGATCACCTCAGGTaGGCGGTAGTGACGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EKRGQQPSPALQLFVCWPKDHLR*AVVTGG Trigger: GCCACCCGTCACTACCGCCCACCTGAGGTGATCCTT...AGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTTGGCATGGGCTGAGCTaGGGGAGCCAGAAACTGACC | + |
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Preference number: 4 (lower is better) Translates to: GEAGEKGPAAQSSSPTLRWHGLS*GSQKLT Trigger: GGTCAGTTTCTGGCTCCCCCAGCTCAGCCCATGCCA...ACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
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| CDS-3UTR TCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGGTACGGCGTTTGTaGCAGTGGTGGGCATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: WRKGASSPVQLSNSSCAGLVRRL*QWWACL Trigger: CAAGCATGCCCACCACTGTCACAAACGCCGTACCAG...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR TCA 90 bp | GGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTCTGGTACGGCGTTTGTaGCAGTGGTGGGCATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GEAGEKGPAAQSSSPTLRLVRRL*QWWACL Trigger: CAAGCATGCCCACCACTGTCACAAACGCCGTACCAG...ACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR TCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACGCCAATGTGATGCGCTaGGCAGGGTCGAACTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHANVMR*AGSNSN Trigger: GTTAGAGTTCGACCCTGCTCAGCGCATCACATTGGC...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS-3UTR GCA 90 bp | GAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGGCTGCTGCGCTTACTaGTCTGTTGGCTTCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKRGQQPSPALQLFVCWPGCCAY*SVGFSR Trigger: CCTCGAGAAGCCAACAGAGCAGTAAGCGCAGCAGCC...AGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR GCA 90 bp | AGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCCACCTTGCCAAAGGTaGCTTCACCCAGGTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RKGASSPVQLSNSSCAGLPPCQR*LHPGSP Trigger: TGGGGAACCTGGGTGAAGGCACCTTTGGCAAGGTGG...CAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCGCTCAGGTATGGGTCTaGCTCTGGGGAACGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCAQVWV*LWGTVS Trigger: CGATACCGTTCCCCAGAGCCAGACCCATACCTGAGC...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | GAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCTCAGGTATGGGTCTaGCTCTGGGGAACGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: EKRGQQPSPALQLFVCWPAQVWV*LWGTVS Trigger: CGATACCGTTCCCCAGAGCCAGACCCATACCTGAGC...AGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS-3UTR CCA 90 bp | AGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACCTCGCTTACTGCTCTGTTaGCTTCTCGAGGAAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: RGQQPSPALQLFVCWPAPRLLLC*LLEEAL Trigger: CAGTGCTTCCTCGAGAAGCCAACAGAGCAGTAAGCG...AGGTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGGCGGTAGTGACGGGTaGCCACAATGGTGGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKRGQQPSPALQLFVCWPGGSDG*PQWWCD Trigger: ATCACACCACCATTGTGGCCACCCGTCACTACCGCC...AGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGGGCGGTAGTGACGGGTaGCCACAATGGTGGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKGASSPVQLSNSSCAGLGGSDG*PQWWCD Trigger: ATCACACCACCATTGTGGCCACCCGTCACTACCGCC...CAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCGGTATCGCTTACAGTaGTGCATCGTCTCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKGASSPVQLSNSSCAGLRYRLQ*CIVSQA Trigger: AGCCTGGGAGACGATGCATCACTGTAAGCGATACCG...CAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACTGCCCACATTACGGATaGTCTTCAGGGCAACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHCPHYG*SSGQPV Trigger: CACAGGTTGCCCTGAAGATCATCCGTAATGTGGGCA...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTTCCACACTCCGGCTaGTGCGCTTACTGCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EAGEKGPAAQSSSPTLRVLPHSG*CAYCSV Trigger: AACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGGAAG...CACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTCTTCCACACTCCGGCTaGTGCGCTTACTGCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRGWRKGASSPVQLSNSLPHSG*CAYCSV Trigger: AACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGGAAG...AGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGAGCACTCCACCACCTTaGCAAAGGTGCCTTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKGASSPVQLSNSSCAGLSTPPP*QRCLHP Trigger: TGGGTGAAGGCACCTTTGGCAAGGTGGTGGAGTGCT...CAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGGGCACTGCCAAAGTCTaGCACTCGGATGCTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EAGEKGPAAQSSSPTLRVGTAKV*HSDAGV Trigger: AACACCAGCATCCGAGTGGCAGACTTTGGCAGTGCC...CACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGGCACTGCCAAAGTCTaGCACTCGGATGCTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GEAGEKGPAAQSSSPTLRGTAKV*HSDAGV Trigger: AACACCAGCATCCGAGTGGCAGACTTTGGCAGTGCC...ACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGGTGCAGCAAGGCTTCTaGCAATGTGATGCGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAGEKGPAAQSSSPTLRVVQQGF*QCDALS Trigger: GCTCAGCGCATCACATTGGCAGAAGCCTTGCTGCAC...CACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGTGCCCATCCTGCCTCTaGTGCTTGTTTGCCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: EAGEKGPAAQSSSPTLRVCPSCL*CLFAQC Trigger: GCATTGGGCAAACAAGCAGCAGAGGCAGGATGGGCA...CACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTATTGGCTGCCCATCCTaGCTCTGCTGCTTGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGEAGEKGPAAQSSSPTLIGCPS*LCCLFA Trigger: GGCAAACAAGCAGCAGAGGCAGGATGGGCAGCCAAT...AAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACATCTCATATCGCTCTTaGAGCCAATCGCCGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHISYRS*SQSPIR Trigger: CCGGATCGGCGATTGGCTCCAAGAGCGATATGAGAT...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCCTGTGACTTCCCTCTaGCATGGTCCAAGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGEAGEKGPAAQSSSPTLPVTSL*HGPSTP Trigger: TGGAGTGCTTGGACCATGCCAGAGGGAAGTCACAGG...AAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTCCTGTGACTTCCCTCTaGCATGGTCCAAGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKRGQQPSPALQLFVCWPPVTSL*HGPSTP Trigger: TGGAGTGCTTGGACCATGCCAGAGGGAAGTCACAGG...AGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTTGCCCACATTACGGATaGTCTTCAGGGCAACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEAGEKGPAAQSSSPTLRCPHYG*SSGQPV Trigger: CACAGGTTGCCCTGAAGATCATCCGTAATGTGGGCA...ACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTTCTCGAGGAAGCACTaGTACAAGACCTGGTACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCFSRKH*YKTWYG Trigger: GCCGTACCAGGTCTTGTAGCAGTGCTTCCTCGAGAA...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCGTATGGGTCTGGCTCTaGGGAACGGTATCGCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCVWVWL*GTVSLT Trigger: TGTAAGCGATACCGTTCCCCAGAGCCAGACCCATAC...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGATCTTGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGGCGGTAGCTCAGGTATaGGTCTGGCTCTGGGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GWDLAGLVPLPHMQSSDGAVAQV*VWLWGT Trigger: CGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGC...CCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTCGCTTACTGCTCTGTTaGCTTCTCGAGGAAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SGRGWRKGASSPVQLSNSRLLLC*LLEEAL Trigger: CAGTGCTTCCTCGAGAAGCCAACAGAGCAGTAAGCG...AGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCGGCTTCAAGTCTGTGTaGGTCAGCTGGTTCTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCGFKSV*VSWFSC Trigger: ACACGAGAACCAGCTGACCCACACAGACTTGAAGCC...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCGGCTTCAAGTCTGTGTaGGTCAGCTGGTTCTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRKGASSPVQLSNSSCAGGFKSV*VSWFSC Trigger: ACACGAGAACCAGCTGACCCACACAGACTTGAAGCC...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGACGGGTGGCCACAATaGTGGTGTGATGTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEAGEKGPAAQSSSPTLRDGWPQ*WCDVHG Trigger: ACCATGAACATCACACCACCATTGTGGCCACCCGTC...ACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTGACGGGTGGCCACAATaGTGGTGTGATGTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGEAGEKGPAAQSSSPTLDGWPQ*WCDVHG Trigger: ACCATGAACATCACACCACCATTGTGGCCACCCGTC...AAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCAGTCTGCCACTCGGATaGTGGTGTTCTTCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCSLPLG*WCSSLT Trigger: AGTCAGTGAAGAACACCAGCATCCGAGTGGCAGACT...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTCACTGCTACAAGACCTaGTACGGCGTTTGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGRGWRKGASSPVQLSNSHCYKT*YGVCDS Trigger: ACTGTCACAAACGCCGTACCAGGTCTTGTAGCAGTG...AGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCACTGCTACAAGACCTaGTACGGCGTTTGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WRKGASSPVQLSNSSCAGHCYKT*YGVCDS Trigger: ACTGTCACAAACGCCGTACCAGGTCTTGTAGCAGTG...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTGGGTGGCCACAATGGTaGTGTGATGTTCATGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRGWRKGASSPVQLSNSGWPQW*CDVHGQ Trigger: TTGACCATGAACATCACACCACCATTGTGGCCACCC...AGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGGGGTGGCCACAATGGTaGTGTGATGTTCATGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKGASSPVQLSNSSCAGLGWPQW*CDVHGQ Trigger: TTGACCATGAACATCACACCACCATTGTGGCCACCC...CAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCTGCTTCCTGGTACGGTaGATCATGTGTGATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: WRKGASSPVQLSNSSCAGCFLVR*IMCDGM Trigger: CATCCCATCACACATGATCCACCGTACCAGGAAGCA...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTTGCTTCCTGGTACGGTaGATCATGTGTGATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VGEAGEKGPAAQSSSPTLCFLVR*IMCDGM Trigger: CATCCCATCACACATGATCCACCGTACCAGGAAGCA...AAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTAAGGCGATGCACATATaGCCATGGAAGTTGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEAGEKGPAAQSSSPTLRKAMHI*PWKLNQ Trigger: CTGGTTCAACTTCCATGGTCATATGTGCATCGCCTT...ACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGGGAGCTCAAAGGCGATaGACATATGACCATGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAGEKGPAAQSSSPTLRVGAQRR*TYDHGS Trigger: ACTTCCATGGTCATATGTGCATCGCCTTTGAGCTCC...CACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCGGAGCTCAAAGGCGATaGACATATGACCATGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WRKGASSPVQLSNSSCAGGAQRR*TYDHGS Trigger: ACTTCCATGGTCATATGTGCATCGCCTTTGAGCTCC...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGTATGACCATGGAAGTTaGACCAGTCAGACATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAGEKGPAAQSSSPTLRVYDHGS*TSQTSG Trigger: TCCTGATGTCTGACTGGTTCAACTTCCATGGTCATA...CACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACAACTCTTCAGAGGTTTaGAGTTCTCCTTCACATACC | + |
|
Preference number: 4 (lower is better) Translates to: KGASSPVQLSNSSCAGLHNSSEV*SSPSHT Trigger: GGTATGTGAAGGAGAACTGCAAACCTCTGAAGAGTT...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
||
| CDS-3UTR CCA 90 bp | GCACATATGACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAACTTTTCCGCTTCCGGCTCTaGCCTCCGCCCGTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHMTMEVEPVRHQDTKELFRFRL*PPPVAA Trigger: TGCTGCCACGGGCGGAGGCCAGAGCCGGAAGCGGAA...AAGTTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGTCATATGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCTATTTTCATGGGTCTaGAAGAGTGTAAAGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VGEAGEKGPAAQSSSPTLLFSWV*KSVKPR Trigger: CCGTGGCTTTACACTCTTCCAGACCCATGAAAATAG...AAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCCTATTTTCATGGGTCTaGAAGAGTGTAAAGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCLFSWV*KSVKPR Trigger: CCGTGGCTTTACACTCTTCCAGACCCATGAAAATAG...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTTCATGTGTGATGGGATaGGTCCTAGAATCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKRGQQPSPALQLFVCWPSCVMG*VLESSP Trigger: TGGAGAAGATTCTAGGACCCATCCCATCACACATGA...AGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCTCATGTGTGATGGGATaGGTCCTAGAATCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRKGASSPVQLSNSSCAGSCVMG*VLESSP Trigger: TGGAGAAGATTCTAGGACCCATCCCATCACACATGA...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | GCACATATGACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAACTTAGTGGTGGGCATGCTTaGGGGTACGGTACGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHMTMEVEPVRHQDTKELSGGHA*GYGTAP Trigger: GGGCGCCGTACCGTACCCGCAAGCATGCCCACCACT...AAGTTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGTCATATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTACCCCACATGCAAAGTTCTGATGGGTGGGTAGAAATCACCTCTGCAAAAAAGGATCACCTCAGGTaGGCGGTAGTGACGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPHMQSSDGWVEITSAKKDHLR*AVVTGG Trigger: GCCACCCGTCACTACCGCCCACCTGAGGTGATCCTT...TTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTGGGGTAGAGG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCAATATTTCTGCTTCCTaGTACGGTGGATCATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLEKRGQQPSPALQLFVCNISAS*YGGSCV Trigger: CACACATGATCCACCGTACCAGGAAGCAGAAATATT...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | CCACTCATTTCCTTTCATGCTCAGAACTTAGGCTACTGGGTGGGATCTTGCTGGTGCTTGTTTGCCCAATaGCTGGGGTCTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLISFHAQNLGYWVGSCWCLFAQ*LGSPWH Trigger: ATGCCAAGGAGACCCCAGGCATTGGGCAAACAAGCA...CCAGCAAGATCCCACCCAGTAGCCTAAGTTCTGAGCATGAAAGGAAATGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | GATGCACATATGACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAAGCGGTAGCTCAGGTATaGGTCTGGCTCTGGGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: DAHMTMEVEPVRHQDTKEAVAQV*VWLWGT Trigger: CGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGC...TTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGTCATATGTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGTGTTCTCTATTTTCATaGGTCTGGAAGAGTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EAGEKGPAAQSSSPTLRVCSLFS*VWKSVK Trigger: CTTTACACTCTTCCAGACCCATGAAAATAGAGAACA...CACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCTGTTCTCTATTTTCATaGGTCTGGAAGAGTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WRKGASSPVQLSNSSCAGCSLFS*VWKSVK Trigger: CTTTACACTCTTCCAGACCCATGAAAATAGAGAACA...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | CACATGCAAAGTTCTGATGGGTGGGTAGAAATCACCTCTGCAAAATGCACTTGTCTTCAGGGCAACCTGTaGCTTCCCTCTGGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HMQSSDGWVEITSAKCTCLQGNL*LPSGMV Trigger: GACCATGCCAGAGGGAAGTCACAGGTTGCCCTGAAG...ACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | CCACTCATTTCCTTTCATGCTCAGAACTTAGGCTACTGGGTGGGATCTTGCTGGAGTCTGCCACTCGGATaGTGGTGTTCTTCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLISFHAQNLGYWVGSCWSLPLG*WCSSLT Trigger: AGTCAGTGAAGAACACCAGCATCCGAGTGGCAGACT...CCAGCAAGATCCCACCCAGTAGCCTAAGTTCTGAGCATGAAAGGAAATGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | CACATGCAAAGTTCTGATGGGTGGGTAGAAATCACCTCTGCAAAATGCACTTGTATCCGGCACACCAGGTaGCCCTCCTTGTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HMQSSDGWVEITSAKCTCIRHTR*PSLSSS Trigger: GGAAGATGACAAGGAGGGCCACCTGGTGTGCCGGAT...ACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | AATCACCTCTGCAAAATGCACTTGTCCAGGTACCAAATTACAGTTGACAGGCCTCGGTATCGCTTACAGTaGTGCATCGTCTCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHLCKMHLSRYQITVDRPRYRLQ*CIVSQA Trigger: AGCCTGGGAGACGATGCATCACTGTAAGCGATACCG...AGGCCTGTCAACTGTAATTTGGTACCTGGACAAGTGCATTTTGCAGAGGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | GATCTTGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGTGGGTATATGACCATGGAAGTTaGACCAGTCAGACATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLAGLVPLPHMQSSDGWVYDHGS*TSQTSG Trigger: TCCTGATGTCTGACTGGTTCAACTTCCATGGTCATA...TACCCACCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGAACATTAATTTCTAGACGAGCAGCTTCCCGATACTTGCCCACATTACGGAGCACTCCACCACCTTaGCAAAGGTGCCTTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRTLISRRAASRYLPTLRSTPPP*QRCLHP Trigger: TGGGTGAAGGCACCTTTGGCAAGGTGGTGGAGTGCT...CCGTAATGTGGGCAAGTATCGGGAAGCTGCTCGTCTAGAAATTAATGTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CCA 90 bp | AATCACCTCTGCAAAATGCACTTGTCCAGGTACCAAATTACAGTTGACAGGCCTGTCCTCTCCAAAAGATaGGCTCCGCTCTTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: NHLCKMHLSRYQITVDRPVLSKR*APLFTP Trigger: CGGTGTGAAGAGCGGAGCCCATCTTTTGGAGAGGAC...AGGCCTGTCAACTGTAATTTGGTACCTGGACAAGTGCATTTTGCAGAGGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACATTAATTTCTAGACGAGCAGCTTCCCGATACTTGCCCACATTACGGCCTGTGACTTCCCTCTaGCATGGTCCAAGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRTLISRRAASRYLPTLRPVTSL*HGPSTP Trigger: TGGAGTGCTTGGACCATGCCAGAGGGAAGTCACAGG...CCGTAATGTGGGCAAGTATCGGGAAGCTGCTCGTCTAGAAATTAATGTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTTGAGAACATTAATTTCTAGACGAGCAGCTTCCCGATACTTGCCCACACTGGTACGGCGTTTGTaGCAGTGGTGGGCATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IFLRTLISRRAASRYLPTLVRRL*QWWACL Trigger: CAAGCATGCCCACCACTGTCACAAACGCCGTACCAG...TGTGGGCAAGTATCGGGAAGCTGCTCGTCTAGAAATTAATGTTCTCAAGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR GCA 90 bp | ACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAACTTATTTTCCTTCCACCTTGCCAAAGGTaGCTTCACCCAGGTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMEVEPVRHQDTKELIFLPPCQR*LHPGSP Trigger: TGGGGAACCTGGGTGAAGGCACCTTTGGCAAGGTGG...AAGGAAAATAAGTTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR GCA 90 bp | ACATTAATTTCTAGACGAGCAGCTTCCCGATACTTGCCCACATTACGGATGATCTCATCGAGGAAGCACTaGTACAAGACCTGGTACGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLISRRAASRYLPTLRMISSRKH*YKTWYG Trigger: GCCGTACCAGGTCTTGTAGCAGTGCTTCCTCGATGA...GATCATCCGTAATGTGGGCAAGTATCGGGAAGCTGCTCGTCTAGAAATTAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTTGAGAACATTAATTTCTAGACGAGCAGCTTCCCGATACTTGCCCACAGCTCAGGTATGGGTCTaGCTCTGGGGAACGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: IFLRTLISRRAASRYLPTAQVWV*LWGTVS Trigger: CGATACCGTTCCCCAGAGCCAGACCCATACCTGAGC...TGTGGGCAAGTATCGGGAAGCTGCTCGTCTAGAAATTAATGTTCTCAAGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CCA 90 bp | AATCACCTCTGCAAAATGCACTTGTCCAGGTACCAAATTACAGTTGACAGGCCTATCTCATATCGCTCTTaGAGCCAATCGCCGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NHLCKMHLSRYQITVDRPISYRS*SQSPIR Trigger: CCGGATCGGCGATTGGCTCCAAGAGCGATATGAGAT...AGGCCTGTCAACTGTAATTTGGTACCTGGACAAGTGCATTTTGCAGAGGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR TCA 90 bp | ACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAACTTATTTTCCTTCGGTATCGCTTACAGTaGTGCATCGTCTCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMEVEPVRHQDTKELIFLRYRLQ*CIVSQA Trigger: AGCCTGGGAGACGATGCATCACTGTAAGCGATACCG...AAGGAAAATAAGTTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAACTTATTTTCCTTGTCCTCTCCAAAAGATaGGCTCCGCTCTTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: TMEVEPVRHQDTKELIFLVLSKR*APLFTP Trigger: CGGTGTGAAGAGCGGAGCCCATCTTTTGGAGAGGAC...AAGGAAAATAAGTTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR TCA 90 bp | CACATGCAAAGTTCTGATGGGTGGGTAGAAATCACCTCTGCAAAATGCACTTGTAAGGCGATGCACATATaGCCATGGAAGTTGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HMQSSDGWVEITSAKCTCKAMHI*PWKLNQ Trigger: CTGGTTCAACTTCCATGGTCATATGTGCATCGCCTT...ACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CCA 90 bp | ATGACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAACTTATTTTCCACTGCTACAAGACCTaGTACGGCGTTTGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: MTMEVEPVRHQDTKELIFHCYKT*YGVCDS Trigger: ACTGTCACAAACGCCGTACCAGGTCTTGTAGCAGTG...GAAAATAAGTTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CCA 90 bp | CACATGCAAAGTTCTGATGGGTGGGTAGAAATCACCTCTGCAAAATGCACTTGTAATATTTCTGCTTCCTaGTACGGTGGATCATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HMQSSDGWVEITSAKCTCNISAS*YGGSCV Trigger: CACACATGATCCACCGTACCAGGAAGCAGAAATATT...ACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS TCA 90 bp | GCTTCCGGCTCTGGCCTCCGCCCGTGGCAGCACCGCCCCCTCGCGTaGCGCAGCCGTCGGCGGCCCGGGCTCGACCCGGCCCAGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASGSGLRPWQHRPLA*RSRRRPGLDPAQRP Trigger: AGGCCTCTGGGCCGGGTCGAGCCCGGGCCGCCGACGGCTGCGTCACGCGAGGGGGCGGTGCTGCCACGGGCGGAGGCCAGAGCCGGAAGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
||
| CDS CCA 90 bp | ACTCTGGGGGACTGGCCTGCCCCGCCAGGGTCCGGGCGACATCGGTaGAGGTCTCTTCCCGGAGGTCCCGGGAGCAGCCTCGGGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLGDWPAPPGSGRHR*RSLPGGPGSSLGPR Trigger: CCGCGGCCCGAGGCTGCTCCCGGGACCTCCGGGAAGAGACCTCCACCGATGTCGCCCGGACCCTGGCGGGGCAGGCCAGTCCCCCAGAGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
||
| CDS CCA 90 bp | AGGACGGCTCTGGGCCTAAAGGAGGAACCCACCGGACTGCCAGGCTaGGGCCGCTTCCCCGCCGCGGCCCAGCTGTGCTCGCCAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTALGLKEEPTGLPG*GRFPAAAQLCSPAS Trigger: AGAGGCTGGCGAGCACAGCTGGGCCGCGGCGGGGAAGCGGCCCCAGCCTGGCAGTCCGGTGGGTTCCTCCTTTAGGCCCAGAGCCGTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
||
| CDS GCA 90 bp | CCTGACCGCTCTAGCCCCGAACTCGCAGACTCTGGGGGACTGGCCTaGCCCGCCAGGGTCCGGGCGACATCGGTGGAGGTCTCTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PDRSSPELADSGGLA*PARVRATSVEVSSR Trigger: CCGGGAAGAGACCTCCACCGATGTCGCCCGGACCCTGGCGGGGCAGGCCAGTCCCCCAGAGTCTGCGAGTTCGGGGCTAGAGCGGTCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCAGTGGTGGGCATGCTaGCGGGTACGGTACGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WRKGASSPVQLSNSSCAGQWWAC*RVRYGA Trigger: GGCGCCGTACCGTACCCGCAAGCATGCCCACCACTG...GCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS GCA 90 bp | TGCTACAAGACCTGGTACGGCGTTTGTGACAGTGGTGGGCATGCTTaGGGGTACGGTACGGCGCCCTCTCTCGTGACCGTCTCCGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: CYKTWYGVCDSGGHA*GYGTAPSLVTVSDV Trigger: GACATCGGAGACGGTCACGAGAGAGGGCGCCGTACCGTACCCGCAAGCATGCCCACCACTGTCACAAACGCCGTACCAGGTCTTGTAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 ENSMUST00000217409.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGATCTTGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGCAGTGGTGGGCATGCTaGCGGGTACGGTACGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWDLAGLVPLPHMQSSDGQWWAC*RVRYGA Trigger: GGCGCCGTACCGTACCCGCAAGCATGCCCACCACTG...CCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACCTGCGCTTACTGCTCTGTaGGCTTCTCGAGGAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RGQQPSPALQLFVCWPAPALTAL*ASRGST Trigger: AGTGCTTCCTCGAGAAGCCAACAGAGCAGTAAGCGC...AGGTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCACCAGGTGGCCCTCCTaGTCATCTTCCACACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLEKRGQQPSPALQLFVCTRWPS*SSSTLR Trigger: CCGGAGTGTGGAAGATGACAAGGAGGGCCACCTGGT...GCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTACCAGGTGGCCCTCCTaGTCATCTTCCACACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGRGWRKGASSPVQLSNSTRWPS*SSSTLR Trigger: CCGGAGTGTGGAAGATGACAAGGAGGGCCACCTGGT...AGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTGCACAAGCACTCCACCACCTaGCCAAAGGTGCCTTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: KGASSPVQLSNSSCAGLHKHSTT*PKVPSP Trigger: GGGTGAAGGCACCTTTGGCAAGGTGGTGGAGTGCTT...GTGCAGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS GCA 90 bp | TCCGGCACACCAGGTGGCCCTCCTTGTCATCTTCCACACTCCGGCTaGTGCGCTTACTGCTCTGTTGGCTTCTCGAGGAAGCACTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGTPGGPPCHLPHSG*CAYCSVGFSRKHCY Trigger: GTAGCAGTGCTTCCTCGAGAAGCCAACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGGAAGATGACAAGGAGGGCCACCTGGTGTGCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS CCA 90 bp | AGACCGCCTCCTCTTCCAGCGGTAGCTCAGGTATGGGTCTGGCTCTaGGGAACGGTATCGCTTACAGTGATGCATCGTCTCCCAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPPLPAVAQVWVWL*GTVSLTVMHRLPGS Trigger: GGAGCCTGGGAGACGATGCATCACTGTAAGCGATACCGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGCTGGAAGAGGAGGCGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 ENSMUST00000217409.2 |
||
| CDS CCA 90 bp | AGACCGCCTCCTCTTCCAGCGGTAGCTCAGGTATGGGTCTGGCTCTaGGGAACGGTATCGCTTACAGTGATGCATCGAGGAGCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPPPLPAVAQVWVWL*GTVSLTVMHRGAAW Trigger: CCAGGCTGCTCCTCGATGCATCACTGTAAGCGATACCGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGCTGGAAGAGGAGGCGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215158.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGAGGCTGGAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTAAGCACTCCACCACCTaGCCAAAGGTGCCTTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VGEAGEKGPAAQSSSPTLKHSTT*PKVPSP Trigger: GGGTGAAGGCACCTTTGGCAAGGTGGTGGAGTGCTT...AAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTCCAGCCTCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS GCA 90 bp | GGCACACCAGGTGGCCCTCCTTGTCATCTTCCACACTCCGGCTGCTaGGCTTACTGCTCTGTTGGCTTCTCGAGGAAGCACTGCTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTPGGPPCHLPHSGC*AYCSVGFSRKHCYK Trigger: CTTGTAGCAGTGCTTCCTCGAGAAGCCAACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGGAAGATGACAAGGAGGGCCACCTGGTGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
||
| CDS CCA 90 bp | ACTGTAAGACCGCCTCCTCTTCCAGCGGTAGCTCAGGTATGGGTCTaGCTCTGGGGAACGGTATCGCTTACAGTGATGCATCGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVRPPPLPAVAQVWV*LWGTVSLTVMHRLP Trigger: TGGGAGACGATGCATCACTGTAAGCGATACCGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGCTGGAAGAGGAGGCGGTCTTACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 ENSMUST00000217409.2 |
||
| CDS CCA 90 bp | ACTGTAAGACCGCCTCCTCTTCCAGCGGTAGCTCAGGTATGGGTCTaGCTCTGGGGAACGGTATCGCTTACAGTGATGCATCGAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVRPPPLPAVAQVWV*LWGTVSLTVMHRGA Trigger: TGCTCCTCGATGCATCACTGTAAGCGATACCGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGCTGGAAGAGGAGGCGGTCTTACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215158.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGATCTTGCTGGGTTGGTACCTCTACCCCACATGCAAAGTTCTGATGGGGCGCTTACTGCTCTGTaGGCTTCTCGAGGAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GWDLAGLVPLPHMQSSDGALTAL*ASRGST Trigger: AGTGCTTCCTCGAGAAGCCAACAGAGCAGTAAGCGC...CCCATCAGAACTTTGCATGTGGGGTAGAGGTACCAACCCAGCAAGATCCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAAAGGGGCCAGCAGCCCAGTCCAGCTCTCCAACTCTTCGTGTGCTGGCCTCTGACCTTCAGAGGTTaGCAGTTCTCCTTCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: EKRGQQPSPALQLFVCWPLTFRG*QFSFTY Trigger: GTATGTGAAGGAGAACTGCAAACCTCTGAAGGTCAG...AGGCCAGCACACGAAGAGTTGGAGAGCTGGACTGGGCTGCTGGCCCCTTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CAA 90 bp | GATGCACATATGACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAACAGTGGTGGGCATGCTaGCGGGTACGGTACGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DAHMTMEVEPVRHQDTKEQWWAC*RVRYGA Trigger: GGCGCCGTACCGTACCCGCAAGCATGCCCACCACTG...TTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGTCATATGTGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
||
| CDS-3UTR CAA 90 bp | CACATGCAAAGTTCTGATGGGTGGGTAGAAATCACCTCTGCAAAATGCACTTGTTCCTGCCTCTGCTGCTaGTTTGCCCAATGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HMQSSDGWVEITSAKCTCSCLCC*FAQCLG Trigger: CCCCAGGCATTGGGCAAACAAGCAGCAGAGGCAGGA...ACAAGTGCATTTTGCAGAGGTGATTTCTACCCACCCATCAGAACTTTGCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215233.2 |
||
| CDS-3UTR CAA 90 bp | GCACATATGACCATGGAAGTTGAACCAGTCAGACATCAGGACACAAAGGAACTTAAGCACTCCACCACCTaGCCAAAGGTGCCTTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: AHMTMEVEPVRHQDTKELKHSTT*PKVPSP Trigger: GGGTGAAGGCACCTTTGGCAAGGTGGTGGAGTGCTT...AAGTTCCTTTGTGTCCTGATGTCTGACTGGTTCAACTTCCATGGTCATATGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
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| CDS GCA 72 bp | CCAGGCTGGGGCCGCTTCCCCGCCGCGGCCCAGCTGTaGTCGCCAGCCTCTTCCTGCGCGCGGAGAGGACCG | + |
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Preference number: 6 (lower is better) Translates to: PGWGRFPAAAQL*SPASSCARRGP Trigger: CGGTCCTCTCCGCGCGCAGGAAGAGGCTGGCGAGCACAGCTGGGCCGCGGCGGGGAAGCGGCCCCAGCCTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS CCA 72 bp | CTGGGCCTAAAGGAGGAACCCACCGGACTGCCAGGCTaGGGCCGCTTCCCCGCCGCGGCCCAGCTGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LGLKEEPTGLPG*GRFPAAAQLCS Trigger: CGAGCACAGCTGGGCCGCGGCGGGGAAGCGGCCCCAGCCTGGCAGTCCGGTGGGTTCCTCCTTTAGGCCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS GCA 72 bp | TCTAGCCCCGAACTCGCAGACTCTGGGGGACTGGCCTaGCCCGCCAGGGTCCGGGCGACATCGGTGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSPELADSGGLA*PARVRATSVEV Trigger: GACCTCCACCGATGTCGCCCGGACCCTGGCGGGGCAGGCCAGTCCCCCAGAGTCTGCGAGTTCGGGGCTAGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065330.8 |
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| CDS GCA 72 bp | ACCTGGTACGGCGTTTGTGACAGTGGTGGGCATGCTTaGGGGTACGGTACGGCGCCCTCTCTCGTGACCGTC | + |
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Preference number: 6 (lower is better) Translates to: TWYGVCDSGGHA*GYGTAPSLVTV Trigger: GACGGTCACGAGAGAGGGCGCCGTACCGTACCCGCAAGCATGCCCACCACTGTCACAAACGCCGTACCAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 ENSMUST00000217409.2 |
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| CDS CCA 72 bp | CGCTCTTGGAGCCAATCGCCGATCCGGCACACCAGGTaGCCCTCCTTGTCATCTTCCACACTCCGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RSWSQSPIRHTR*PSLSSSTLRLL Trigger: CAGCAGCCGGAGTGTGGAAGATGACAAGGAGGGCCACCTGGTGTGCCGGATCGGCGATTGGCTCCAAGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS CCA 72 bp | GGTACCTCCGCTGGTAGGGTATACGATCATGGCTTCTaGACCGTGATCTCCGTGGGGGAGGCTCCCTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: GTSAGRVYDHGF*TVISVGEAPFG Trigger: CCCGAAGGGAGCCTCCCCCACGGAGATCACGGTCCAGAAGCCATGATCGTATACCCTACCAGCGGAGGTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065330.8 ENSMUST00000215158.2 ENSMUST00000215233.2 ENSMUST00000217409.2 |
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| CDS CAA 72 bp | AGCCAATCGCCGATCCGGCACACCAGGTGGCCCTCCTaGTCATCTTCCACACTCCGGCTGCTGCGCTTACTG | + |
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Preference number: 6 (lower is better) Translates to: SQSPIRHTRWPS*SSSTLRLLRLL Trigger: CAGTAAGCGCAGCAGCCGGAGTGTGGAAGATGACAAGGAGGGCCACCTGGTGTGCCGGATCGGCGATTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS TCA 72 bp | CCGCTGGTAGGGTATACGATCATGGCTTCTGGACCGTaGTCTCCGTGGGGGAGGCTCCCTTCGGGATGGGTA | + |
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Preference number: 6 (lower is better) Translates to: PLVGYTIMASGP*SPWGRLPSGWV Trigger: TACCCATCCCGAAGGGAGCCTCCCCCACGGAGATCACGGTCCAGAAGCCATGATCGTATACCCTACCAGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065330.8 ENSMUST00000215158.2 ENSMUST00000215233.2 ENSMUST00000217409.2 |
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| CDS GCA 72 bp | GGTGGCCCTCCTTGTCATCTTCCACACTCCGGCTGCTaGGCTTACTGCTCTGTTGGCTTCTCGAGGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: GGPPCHLPHSGC*AYCSVGFSRKH Trigger: GTGCTTCCTCGAGAAGCCAACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGGAAGATGACAAGGAGGGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS GCA 72 bp | CCAGGTGGCCCTCCTTGTCATCTTCCACACTCCGGCTaGTGCGCTTACTGCTCTGTTGGCTTCTCGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGGPPCHLPHSG*CAYCSVGFSRK Trigger: CTTCCTCGAGAAGCCAACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGGAAGATGACAAGGAGGGCCACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS CAA 72 bp | GCATCGAGGAGCAGCCTGGACATTTGTACTCCTGGCTaGGTCTGGCCCATTCTCCGGGATGGAGCGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASRSSLDICTPG*VWPILRDGAVP Trigger: TGGAACCGCTCCATCCCGGAGAATGGGCCAGACCAAGCCAGGAGTACAAATGTCCAGGCTGCTCCTCGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215158.2 |
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| CDS CCA 72 bp | CCGCCTCCTCTTCCAGCGGTAGCTCAGGTATGGGTCTaGCTCTGGGGAACGGTATCGCTTACAGTGATGCAT | + |
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Preference number: 6 (lower is better) Translates to: PPPLPAVAQVWV*LWGTVSLTVMH Trigger: ATGCATCACTGTAAGCGATACCGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGCTGGAAGAGGAGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065330.8 ENSMUST00000215158.2 ENSMUST00000215233.2 ENSMUST00000217409.2 |
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| CDS CCA 72 bp | CATCGAGGAGCAGCCTGGACATTTGTACTCCTGGCTTaGTCTGGCCCATTCTCCGGGATGGAGCGGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: HRGAAWTFVLLA*SGPFSGMERFH Trigger: ATGGAACCGCTCCATCCCGGAGAATGGGCCAGACCAAGCCAGGAGTACAAATGTCCAGGCTGCTCCTCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215158.2 |
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| CDS CCA 72 bp | CCTCTTCCAGCGGTAGCTCAGGTATGGGTCTGGCTCTaGGGAACGGTATCGCTTACAGTGATGCATCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PLPAVAQVWVWL*GTVSLTVMHRL Trigger: GAGACGATGCATCACTGTAAGCGATACCGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGCTGGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 ENSMUST00000217409.2 |
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| CDS CCA 72 bp | CCTCTTCCAGCGGTAGCTCAGGTATGGGTCTGGCTCTaGGGAACGGTATCGCTTACAGTGATGCATCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PLPAVAQVWVWL*GTVSLTVMHRG Trigger: TCCTCGATGCATCACTGTAAGCGATACCGTTCCCCAGAGCCAGACCCATACCTGAGCTACCGCTGGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215158.2 |
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| CDS CCA 72 bp | CCCACGATCTCATCGAGGAAGCACTGCTACAAGACCTaGTACGGCGTTTGTGACAGTGGTGGGCATGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PTISSRKHCYKT*YGVCDSGGHAC Trigger: GCAAGCATGCCCACCACTGTCACAAACGCCGTACCAGGTCTTGTAGCAGTGCTTCCTCGATGAGATCGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217409.2 |
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| CDS GCA 72 bp | CCTTGTCATCTTCCACACTCCGGCTGCTGCGCTTACTaGTCTGTTGGCTTCTCGAGGAAGCACTGCTACAAG | + |
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Preference number: 6 (lower is better) Translates to: PCHLPHSGCCAY*SVGFSRKHCYK Trigger: CTTGTAGCAGTGCTTCCTCGAGAAGCCAACAGAGCAGTAAGCGCAGCAGCCGGAGTGTGGAAGATGACAAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS CCA 72 bp | TCTGTTGGCTTCTCGAGGAAGCACTGCTACAAGACCTaGTACGGCGTTTGTGACAGTGGTGGGCATGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SVGFSRKHCYKT*YGVCDSGGHAC Trigger: GCAAGCATGCCCACCACTGTCACAAACGCCGTACCAGGTCTTGTAGCAGTGCTTCCTCGAGAAGCCAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065330.8 ENSMUST00000215233.2 |
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| CDS TCA 72 bp | TATGGGTCTGGCTCTGGGGAACGGTATCGCTTACAGTaGTGCATCGAGGAGCAGCCTGGACATTTGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: YGSGSGERYRLQ*CIEEQPGHLYS Trigger: GGAGTACAAATGTCCAGGCTGCTCCTCGATGCATCACTGTAAGCGATACCGTTCCCCAGAGCCAGACCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215158.2 |
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| CDS GCA 72 bp | TCACTGACTTCTCCTCGCAGCTCTGAAGGCAAGGCATaGCACCTAGGTCAGTCTTGTGCTCATTGTAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SLTSPRSSEGKA*HLGQSCAHCRG Trigger: CCCTCTACAATGAGCACAAGACTGACCTAGGTGGCATGCCTTGCCTTCAGAGCTGCGAGGAGAAGTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215333.2 |
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| CDS CCA 72 bp | ACGGTATCGCTTACAGTGATGCATCGAGGAGCAGCCTaGACATTTGTACTCCTGGCTTGGTCTGGCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: TVSLTVMHRGAA*TFVLLAWSGPF Trigger: GAATGGGCCAGACCAAGCCAGGAGTACAAATGTCCAGGCTGCTCCTCGATGCATCACTGTAAGCGATACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215158.2 |
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