Pregenerated sensors for CLIP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013921Ensembl transcript IDs: ENSMUST00000014065.16, ENSMUST00000126216.2, ENSMUST00000144508.2, ENSMUST00000150892.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCCGCAGGCTGTTaGTCTGGCCCAGGAGCTGTGAAGTCCTTTGGGGCCAATGACTCA | + |
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Preference number: 1 (lower is better) Translates to: VCSGPMGPSGSPAGC*SGPGAVKSFGANDS Trigger: TGAGTCATTGGCCCCAAAGGACTTCACAGCTCCTGGGCCAGACCAACAGCCTGCGGGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR TCA 90 bp | ATGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTaGGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCCCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: MGLPVWGLLVPGSQV*DALRAWQQGPSSQS Trigger: GGACTGGGAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR GCA 90 bp | ACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATaGCCTGAGAGCCTGGCAACAGGGTCCTTCCTCCCAGTCCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: TSCLGSPGAWESGLR*PESLATGSFLPVLR Trigger: CCTAAGGACTGGGAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CCA 90 bp | CCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTaGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: PCSKDGTSCLGSPGA*ESGLRCPESLATGS Trigger: GGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR TCA 90 bp | CCTGCACATATTAGTAATCAGAGATTTGGGACTTGGGGGTTCCCTTaGAGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGAT | + |
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Preference number: 1 (lower is better) Translates to: PAHISNQRFGTWGFP*SWGPWNLEVERLDD Trigger: ATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCTTCAAGGGAACCCCCAAGTCCCAAATCTCTGATTACTAATATGTGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CCA 90 bp | GAAGATTCTGTTACTTGGGTAGGGAAGTCCTGGGAATTAGAAATTTaGGGTCTTCTAGAGATCGTGGGGCTTGGAGGGATGGGAAATTTG | + |
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Preference number: 1 (lower is better) Translates to: EDSVTWVGKSWELEI*GLLEIVGLGGMGNL Trigger: CAAATTTCCCATCCCTCCAAGCCCCACGATCTCTAGAAGACCCCAAATTTCTAATTCCCAGGACTTCCCTACCCAAGTAACAGAATCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR TCA 90 bp | GTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCCGCAGGCTGGCCCAGGAGCTGTaGAGTCCTTTGGGGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: VRAPGLLWTYGALRFSRRLAQEL*SPLGPM Trigger: CATTGGCCCCAAAGGACTTCACAGCTCCTGGGCCAG...CCTGCGGGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGGTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCAGGTTTGAGATGCCCTaGGAGCCTGGCAACAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LVVRAPGLLWTYGALRFSRFEMP*EPGNRV Trigger: GACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCT...GGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGACCACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCCGCAGGCCCAGAGTTCTAGAATaGGGCCTCCAAATTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: VRAPGLLWTYGALRFSRRPRVLE*GLQIWG Trigger: TCCCCAAATTTGGAGGCCCCATTCTAGAACTCTGGG...CCTGCGGGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CAA 90 bp | GATGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTaGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: DGTSCLGSPGAWESG*RCPESLATGSFLPV Trigger: GACTGGGAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGGTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCGTGGAAAATGTTTATTaGGGGGAATCTGCTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LVVRAPGLLWTYGALRFSVENVY*GESALR Trigger: CCTCAGAGCAGATTCCCCCCAATAAACATTTTCCAC...GGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGACCACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGAAGAACGTCCTGTTGTaGAGAGGGTCAGCATCCCTT | + |
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Preference number: 2 (lower is better) Translates to: SPGAWESGLRCPESLATGKNVLL*RGSASL Trigger: AAGGGATGCTGACCCTCTCCACAACAGGACGTTCTT...CCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGGTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCGAAGATTCTGTTACTTaGGTAGGGAAGTCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVVRAPGLLWTYGALRFSEDSVT*VGKSWE Trigger: TTCCCAGGACTTCCCTACCCAAGTAACAGAATCTTC...GGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGACCACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR TCA 90 bp | TGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCGTTAAATGGGGACAGTaGTGTGGCTGGCTATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: WDFLFGVSWCLGVRFEMPVKWGQ*CGWLFW Trigger: CCAGAATAGCCAGCCACATCACTGTCCCCATTTAAC...GGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGACGGGGTTTCTATTCTaGAGTCACTGGGAATCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SPGAWESGLRCPESLATGTGFLF*SHWESL Trigger: TAGAGATTCCCAGTGACTTCAGAATAGAAACCCCGT...CCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCAGGGTCAGCATCCCTTaGGTGAAGTGGAAAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: AWESGLRCPESLATGSFLRVSIP*VKWKMF Trigger: AAACATTTTCCACTTCACCCAAGGGATGCTGACCCT...GAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCAATTTTCTGGGAGCCTTaGCCAGCACAGGGACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LILGTCSEGAVVSCPWWSIFWEP*PAQGLW Trigger: CCACAGTCCCTGTGCTGGCCAAGGCTCCCAGAAAAT...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | TGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCGGTTTCCTGAGGGCTTaGGATTGGGGTCTTAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: WDFLFGVSWCLGVRFEMPGFLRA*DWGLKF Trigger: AAACTTAAGACCCCAATCCCAAGCCCTCAGGAAACC...GGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCCTCTTTTGGGAAACATaGGGTCTGTATTTAGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AWESGLRCPESLATGSFLLFWET*GLYLGS Trigger: ACTCCCTAAATACAGACCTCATGTTTCCCAAAAGAG...GAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCAGCATCCCTTGGGTaGAGTGGAAAATGTTTATTG | + |
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Preference number: 2 (lower is better) Translates to: SPGAWESGLRCPESLATGSASLG*SGKCLL Trigger: CAATAAACATTTTCCACTTCACCCAAGGGATGCTGA...CCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR TCA 90 bp | GGGGCATCTCTGATAAGGAGAGTAGAATATAAGGGCTTTCTGGTGACCTTGGGGGGACAGGGACTAGCCTaGAGGTGCTACTCAGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: GASLIRRVEYKGFLVTLGGQGLA*RCYSGN Trigger: ATTCCCTGAGTAGCACCTTCAGGCTAGTCCCTGTCC...CCCCAAGGTCACCAGAAAGCCCTTATATTCTACTCTCCTTATCAGAGATGCCCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCAAGTTTGGGATTCCCTaGGGATTTGAAGATTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: AWESGLRCPESLATGSFLKFGIP*GFEDSV Trigger: AACAGAATCTTCAAATCCCCAGGGAATCCCAAACTT...GAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CAA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTaGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SIRVLYPCSKDGTSC*GSPGAWESGLRCPE Trigger: CTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR GCA 90 bp | GGGGCATCTCTGATAAGGAGAGTAGAATATAAGGGCTTTCTGGTGACCTTGGGGTGGAAGTATGACCTATaGTTAAGGAGAACCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GASLIRRVEYKGFLVTLGWKYDL*LRRTRV Trigger: CACCCTGGTTCTCCTTAAGCATAGGTCATACTTCCA...CCCCAAGGTCACCAGAAAGCCCTTATATTCTACTCTCCTTATCAGAGATGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR GCA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTGAGTCAGGTTTGAGATaGCCTGAGAGCCTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: SIRVLYPCSKDGTSCLGSESGLR*PESLAT Trigger: TGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTC...AGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTAGAGATCGTGGGGCTTaGAGGGATGGGAAATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SIRVLYPCSKDGTSCLGSRDRGA*RDGKFG Trigger: CCCAAATTTCCCATCCCTCCAAGCCCCACGATCTCT...AGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGTGGGTAGGGAAGTCCTaGGAATTAGAAATTTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SWGPWNLEVERLDDPWTKWVGKS*ELEIWG Trigger: ACCCCAAATTTCTAATTCCCAGGACTTCCCTACCCA...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGATTCTCTCTGGAATTTaGACTCCCCAGAGTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SWGPWNLEVERLDDPWTKILSGI*TPQSSR Trigger: TCTAGAACTCTGGGGAGTTCAAATTCCAGAGAGAAT...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CCA 90 bp | ACTAAGAGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGCTTCATACAAGGCACTaGGGGTTTCTCAGGGTACAG | + |
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Preference number: 2 (lower is better) Translates to: TKSIRVLYPCSKDGTSCLLHTRH*GFLRVQ Trigger: CTGTACCCTGAGAAACCCCCAGTGCCTTGTATGAAG...CAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACTCTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CCA 72 bp | GGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTaGTGGTCAGGGCCCCAGGTCTGCTCTGGACCTATG | + |
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Preference number: 3 (lower is better) Translates to: GTCSEGAVVSCP*WSGPQVCSGPM Trigger: CATAGGTCCAGAGCAGACCTGGGGCCCTGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR TCA 72 bp | GTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTaGGAGCCTGGCAACAGGGTCCTTCCTCCCAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: VSWCLGVRFEMP*EPGNRVLPPSP Trigger: AGGACTGGGAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR TCA 72 bp | CCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTaGGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: PVWGLLVPGSQV*DALRAWQQGPS Trigger: GGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR GCA 72 bp | TTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATaGCCTGAGAGCCTGGCAACAGGGTCCTTCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LGSPGAWESGLR*PESLATGSFLP Trigger: TGGGAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CAA 90 bp | TTGGTGGTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCATTGGGGTCTTAAGTTaGGGATTCCCTGGGGATTTG | + |
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Preference number: 3 (lower is better) Translates to: LVVRAPGLLWTYGALRFSIGVLS*GFPGDL Trigger: CAAATCCCCAGGGAATCCCAAACTTAAGACCCCAAT...GGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGACCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR TCA 72 bp | GAGGACAGGAGTCATGCTGATTTTAGGGACATGCAGTaGAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: EDRSHADFRDMQ*RGSRELSLVVR Trigger: CCTGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAGCATGACTCCTGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CCA 72 bp | CAGGGTCCTTCCTCCCAGTCCTTAGGACCTTGTAGTTaGGGTTTCCTGAGGGCTTGGGATTGGGGTCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: QGPSSQSLGPCS*GFLRAWDWGLK Trigger: CTTAAGACCCCAATCCCAAGCCCTCAGGAAACCCCAACTACAAGGTCCTAAGGACTGGGAGGAAGGACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CAA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCAAATTTTCTGGGAGCCTaGGCCAGCACAGGGACTGTG | + |
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Preference number: 3 (lower is better) Translates to: LILGTCSEGAVVSCPWWSNFLGA*ASTGTV Trigger: CACAGTCCCTGTGCTGGCCAAGGCTCCCAGAAAATT...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGGGTACAGAGGGCAGGAAGACTTGCTGTCCTGTAATTCATGCTTCCAGGCTCAAGAACGTCCTGTaGTGGAGAGGGTCAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: SQGTEGRKTCCPVIHASRLKNVL*WRGSAS Trigger: GGATGCTGACCCTCTCCACAACAGGACGTTCTTGAG...CCTGGAAGCATGAATTACAGGACAGCAAGTCTTCCTGCCCTCTGTACCCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CAA 90 bp | TTATTGAAGAGGACAGGAGTCATGCTGATTTTAGGGACATGCAGTGAAGGGGCATTCTCCCGCAGGCTGTaGGTCTGGCCCAGGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LLKRTGVMLILGTCSEGAFSRRL*VWPRSC Trigger: ACAGCTCCTGGGCCAGACCAACAGCCTGCGGGAGAA...TGCCCCTTCACTGCATGTCCCTAAAATCAGCATGACTCCTGTCCTCTTCAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR GCA 72 bp | TTGAAGAGGACAGGAGTCATGCTGATTTTAGGGACATaGAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LKRTGVMLILGT*SEGAVVSCPWW Trigger: CCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAGCATGACTCCTGTCCTCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGGGTACAGAGGGCAGGAAGACTTGCTGTCCTGTAATTCATGCTTCCAGGGAGGGTCAGCATCCCTaGGGTGAAGTGGAAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: SQGTEGRKTCCPVIHASREGQHP*GEVENV Trigger: AACATTTTCCACTTCACCCAAGGGATGCTGACCCTC...CCTGGAAGCATGAATTACAGGACAGCAAGTCTTCCTGCCCTCTGTACCCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR TCA 72 bp | TCAGTAATCGAGGGCTGGCTAACGGGGTTTCTATTCTaGAGTCACTGGGAATCTCTATCTTGGGATGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SVIEGWLTGFLF*SHWESLSWDGW Trigger: CCAGCCATCCCAAGATAGAGATTCCCAGTGACTTCAGAATAGAAACCCCGTTAGCCAGCCCTCGATTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR-3UTR CAA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGAGAGGGCAGGAAGACTaGCTGTCCTGTAATTCATGC | + |
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Preference number: 3 (lower is better) Translates to: SWGPWNLEVERLDDPWTKRGQED*LSCNSC Trigger: GCATGAATTACAGGACAGCAAGTCTTCCTGCCCTCT...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR TCA 72 bp | ATTAGTAATCAGAGATTTGGGACTTGGGGGTTCCCTTaGAGCTGGGGCCCATGGAATTTGGAGGTTGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: ISNQRFGTWGFP*SWGPWNLEVER Trigger: TCTCTCAACCTCCAAATTCCATGGGCCCCAGCTTCAAGGGAACCCCCAAGTCCCAAATCTCTGATTACTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CCA 72 bp | AGGGCTTGGGATTGGGGTCTTAAGTTTGGGATTCCCTaGGGATTTGAAGATTCTGTTACTTGGGTAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RAWDWGLKFGIP*GFEDSVTWVGK Trigger: CTTCCCTACCCAAGTAACAGAATCTTCAAATCCCCAGGGAATCCCAAACTTAAGACCCCAATCCCAAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR GCA 72 bp | TACAGAGGGCAGGAAGACTTGCTGTCCTGTAATTCATaGTTCCAGGACGGTTTTGGTGTTTGTAAATTGGGG | + |
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Preference number: 3 (lower is better) Translates to: YRGQEDLLSCNS*FQDGFGVCKLG Trigger: CCCCAATTTACAAACACCAAAACCGTCCTGGAAGCATGAATTACAGGACAGCAAGTCTTCCTGCCCTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CCA 72 bp | GTCTTGTTCAGGGGTGAGAACAGGGACTTAAGTGAATaGGGGGCATCTCTGATAAGGAGAGTAGAATATAAG | + |
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Preference number: 3 (lower is better) Translates to: VLFRGENRDLSE*GASLIRRVEYK Trigger: CTTATATTCTACTCTCCTTATCAGAGATGCCCCCCATTCACTTAAGTCCCTGTTCTCACCCCTGAACAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CCA 72 bp | TTTGGGATTCCCTGGGGATTTGAAGATTCTGTTACTTaGGTAGGGAAGTCCTGGGAATTAGAAATTTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FGIPWGFEDSVT*VGKSWELEIWG Trigger: ACCCCAAATTTCTAATTCCCAGGACTTCCCTACCCAAGTAACAGAATCTTCAAATCCCCAGGGAATCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGGGAGGGATGGGAAATTaGGGGACATATATAATATAT | + |
|
Preference number: 3 (lower is better) Translates to: SWGPWNLEVERLDDPWTKGGMGN*GTYIIY Trigger: ATATATTATATATGTCCCCAAATTTCCCATCCCTCC...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| 3UTR CCA 72 bp | GGATTTGAAGATTCTGTTACTTGGGTAGGGAAGTCCTaGGAATTAGAAATTTGGGGTCTTCTAGAGATCGTG | + |
|
Preference number: 3 (lower is better) Translates to: GFEDSVTWVGKS*ELEIWGLLEIV Trigger: CACGATCTCTAGAAGACCCCAAATTTCTAATTCCCAGGACTTCCCTACCCAAGTAACAGAATCTTCAAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| 3UTR CCA 72 bp | CCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATaGACTAAGAGTATTAGAGTCCTCTATCCTTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PWNLEVERLDDP*TKSIRVLYPCS Trigger: GGAACAAGGATAGAGGACTCTAATACTCTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | TTGGTGGTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCGCAGGTGCTGAGGGGTaGACAACTGGCTTCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVRAPGLLWTYGALRFSAGAEG*TTGFCR Trigger: CCGGCAGAAGCCAGTTGTGCACCCCTCAGCACCTGC...GGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGACCACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCCGCAGGTCGGTTCCTCAGTGCTaGGTTGGCACCATGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRAPGLLWTYGALRFSRRSVPQC*VGTMLQ Trigger: CTGGAGCATGGTGCCAACCCAGCACTGAGGAACCGA...CCTGCGGGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGCCTAGCGCCAGCAGCTaGTGTGAGAGACGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPGAWESGLRCPESLATGPSASS*CERRTA Trigger: CGCTGTGCGTCTCTCACAGCAGCTGCTGGCGCTAGG...CCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | TTGGTGGTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCAAGCGCACAATCCCCTaGTTCTGGCCTGCCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVRAPGLLWTYGALRFSKRTIP*FWPATR Trigger: CCTTGTGGCAGGCCAGAAGCAGGGGATTGTGCGCTT...GGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGACCACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCGCTTGGGAGGGCAGATaGAGTACCGGACACCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AWESGLRCPESLATGSFLAWEGR*STGHPQ Trigger: TTGGGGGTGTCCGGTACTTCATCTGCCCTCCCAAGC...GAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGGGACACCCCCAACGCTaGCATCGTTCTTGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGAWESGLRCPESLATGGHPQR*HRSCLL Trigger: CAGAAGGCAAGAACGATGGCAGCGTTGGGGGTGTCC...CCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | TGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCCCCCTGCTTCTGGCCTaGCACAAGGACTTGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDFLFGVSWCLGVRFEMPPLLLA*HKDLVS Trigger: GGAGACCAAGTCCTTGTGGCAGGCCAGAAGCAGGGG...GGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCA 60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | GTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCCGCAGGCTAAGACTGCATCTCTaGCCTCAGCATCCAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRAPGLLWTYGALRFSRRLRLHL*PQHPRK Trigger: TTTCCTTGGATGCTGAGGGCAGAGATGCAGTCTTAG...CCTGCGGGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| 3UTR CAA 72 bp | TCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTaGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCLGSPGAWESG*RCPESLATGSF Trigger: GAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGCATGAGCCCCAGCTTTaGACGCATAATGGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGAWESGLRCPESLATGHEPQL*THNGAV Trigger: CACTGCTCCATTATGCGTGCAAAGCTGGGGCTCATG...CCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGGCCGGCGCTCCTGGGTaGGGCTGGGGGCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWNLEVERLDDPWTKAGAPG*GWGLLE Trigger: TTCCAGAAGCCCCCAGCCCCACCCAGGAGCGCCGGC...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGCGAACAGCTCTGGGATaGTGGTCTTCGGGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SPGAWESGLRCPESLATGRTALG*WSSGQT Trigger: TGTTTGACCCGAAGACCACCATCCCAGAGCTGTTCG...CCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGGTACAGAGGGCAGGAAGACTTGCTGTCCTGTAATTCATGCTTCCAGGTCCACGCCCACCCACTaGCCGCTGGCGAACTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQGTEGRKTCCPVIHASRSTPTH*PLANSV Trigger: CACTGAGTTCGCCAGCGGCCAGTGGGTGGGCGTGGA...CCTGGAAGCATGAATTACAGGACAGCAAGTCTTCCTGCCCTCTGTACCCTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCCTGGATACGAGATGCTaGTGCAAAGACCCCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWESGLRCPESLATGSFLLDTRC*CKDPMP Trigger: AGGCATGGGGTCTTTGCACCAGCATCTCGTATCCAG...GAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR TCA 90 bp | TCTCAGGGTACAGAGGGCAGGAAGACTTGCTGTCCTGTAATTCATGCTTCCAGGGAGCGGAGCAGGTGCTaGGGGGTGCACAACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQGTEGRKTCCPVIHASRERSRC*GVHNWL Trigger: AAGCCAGTTGTGCACCCCTCAGCACCTGCTCCGCTC...CCTGGAAGCATGAATTACAGGACAGCAAGTCTTCCTGCCCTCTGTACCCTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGATGACATCAATCTTGTaGTGGACTTGGGGGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPGAWESGLRCPESLATGMTSIL*WTWGTH Trigger: GTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCAT...CCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGCACCAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | TGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCTCCTCAGTGCTGGGTTaGCACCATGCTCCAGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WDFLFGVSWCLGVRFEMPSSVLG*HHAPVN Trigger: GTTTACTGGAGCATGGTGCCAACCCAGCACTGAGGA...GGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | GGGGCATCTCTGATAAGGAGAGTAGAATATAAGGGCTTTCTGGTGACCTTGGGGCCACCCACTGGCCGCTaGCGAACTCAGTGGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GASLIRRVEYKGFLVTLGPPTGR*RTQWSH Trigger: GTGGGACCACTGAGTTCGCCAGCGGCCAGTGGGTGG...CCCCAAGGTCACCAGAAAGCCCTTATATTCTACTCTCCTTATCAGAGATGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR TCA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTCGCCAGCAGCTGCTGTaGGAGACGCACAGCGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SIRVLYPCSKDGTSCLGSRQQLL*ETHSGR Trigger: GCGGCCGCTGTGCGTCTCTCACAGCAGCTGCTGGCG...AGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | GGGGCATCTCTGATAAGGAGAGTAGAATATAAGGGCTTTCTGGTGACCTTGGGGGCCCCTTCACGCTGCTaGAGACTGCCCAGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GASLIRRVEYKGFLVTLGAPSRC*RLPRDG Trigger: CCCATCTCTGGGCAGTCTGCAGCAGCGTGAAGGGGC...CCCCAAGGTCACCAGAAAGCCCTTATATTCTACTCTCCTTATCAGAGATGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCATTGGCCCCTTCACGCTaGTGCAGACTGCCCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LILGTCSEGAVVSCPWWSLAPSR*CRLPRD Trigger: ATCTCTGGGCAGTCTGCAGCAGCGTGAAGGGGCCAA...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | TTATTGAAGAGGACAGGAGTCATGCTGATTTTAGGGACATGCAGTGAAGGGGCATTCTGCCGGCGCTCCTaGGTGGGGCTGGGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKRTGVMLILGTCSEGAFCRRS*VGLGAS Trigger: AGAAGCCCCCAGCCCCACCCAGGAGCGCCGGCAGAA...TGCCCCTTCACTGCATGTCCCTAAAATCAGCATGACTCCTGTCCTCTTCAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCCAGAGATGGGGAAGATaGGGACTTCTTCTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWESGLRCPESLATGSFLQRWGR*GLLLPF Trigger: AAAGGGAAGAAGAAGTCCCCATCTTCCCCATCTCTG...GAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCACGTCATGTTTGCCTGTaGGCTGGTCCAGCTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LILGTCSEGAVVSCPWWSRHVCL*AGPARC Trigger: GCATCGAGCTGGACCAGCCCACAGGCAAACATGACG...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGTGGAGTTCACCACCCTaGGCCTCGCCCCCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWNLEVERLDDPWTKWSSPP*ASPPSA Trigger: TGCTGAAGGGGGCGAGGCCCAGGGTGGTGAACTCCA...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCACTCCAACTTCAGCTTTaGCCCCTTCACGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LILGTCSEGAVVSCPWWSLQLQL*PLHAAA Trigger: TGCAGCAGCGTGAAGGGGCCAAAGCTGAAGTTGGAG...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | GGGAGTCGTCGTGGTGGGAGATCTGTTAATAATGGGACCTCAGTAATCGAGGGCTGTTTGCCTGTGGGCTaGTCCAGCTCGATGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GSRRGGRSVNNGTSVIEGCLPVG*SSSMPY Trigger: GTATGGCATCGAGCTGGACCAGCCCACAGGCAAACA...GCCCTCGATTACTGAGGTCCCATTATTAACAGATCTCCCACCACGACGACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | CTGTATTTAGGGAGTCGTCGTGGTGGGAGATCTGTTAATAATGGGACCTCAGTATGTTGGTCCAGCGGCTaGGCAGGGTCACATCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LYLGSRRGGRSVNNGTSVCWSSG*AGSHLR Trigger: GCGCAGATGTGACCCTGCGCAGCCGCTGGACCAACA...TACTGAGGTCCCATTATTAACAGATCTCCCACCACGACGACTCCCTAAATACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCACCTCTGGATACGAGATaGTGGTGCAAAGACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LILGTCSEGAVVSCPWWSPLDTR*WCKDPM Trigger: CATGGGGTCTTTGCACCAGCATCTCGTATCCAGAGG...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | CTGTATTTAGGGAGTCGTCGTGGTGGGAGATCTGTTAATAATGGGACCTCAGTAGCTCCTGGGTGGGGCTaGGGGCTTCTGGAACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYLGSRRGGRSVNNGTSVAPGWG*GLLELV Trigger: AACCAGTTCCAGAAGCCCCCAGCCCCACCCAGGAGC...TACTGAGGTCCCATTATTAACAGATCTCCCACCACGACGACTCCCTAAATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGCGCTGGCGAACTCAGTaGTCCCACAGAACCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWNLEVERLDDPWTKRWRTQ*SHRTSA Trigger: CGCTGAGGTTCTGTGGGACCACTGAGTTCGCCAGCG...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| 3UTR CAA 72 bp | GTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTaGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLYPCSKDGTSC*GSPGAWESGLR Trigger: TCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | CTGTATTTAGGGAGTCGTCGTGGTGGGAGATCTGTTAATAATGGGACCTCAGTACACCAGGGCCGCCTCTaGCTTGTCAAGGGACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYLGSRRGGRSVNNGTSVHQGRL*LVKGHV Trigger: GACATGTCCCTTGACAAGGCAGAGGCGGCCCTGGTG...TACTGAGGTCCCATTATTAACAGATCTCCCACCACGACGACTCCCTAAATACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCACGCTGCCATCGTTCTTaGCTTCTGGTTCATCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LILGTCSEGAVVSCPWWSRCHRS*LLVHLA Trigger: AGCTAGATGAACCAGAAGGCAAGAACGATGGCAGCG...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGCAGAGCCGTCATGTTTaGCTGTGGGCTGGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWNLEVERLDDPWTKQSRHV*LWAGPA Trigger: AGCTGGACCAGCCCACAGGCAAACATGACGGCTCTG...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGGTACAGAGGGCAGGAAGACTTGCTGTCCTGTAATTCATGCTTCCAGGCACGCGAACAAGGTCTaGCACATCAAAATAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQGTEGRKTCCPVIHASRHANKV*HIKIGG Trigger: GCCGCCTATTTTGATGTGCCAGACCTTGTTCGCGTG...CCTGGAAGCATGAATTACAGGACAGCAAGTCTTCCTGCCCTCTGTACCCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCAGCCATACCAGTAACCTaGAGCAAAGTCAGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LILGTCSEGAVVSCPWWSAIPVT*SKVSLP Trigger: GGGAAGACTGACTTTGCTCCAGGTTACTGGTATGGC...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | ACTAAGAGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGTGCACAACTGGCTTCTaGCGGCGCTCCTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSIRVLYPCSKDGTSCLCTTGF*RRSWVG Trigger: CCCCACCCAGGAGCGCCGGCAGAAGCCAGTTGTGCA...CAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACTCTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGAACGTCCTGTTGTGGAGAGGGTCAGCATCCCTTGGGTGAAGTGGAAAGCTGGGTTGGCACCATaGTCCAGTAAACATTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQERPVVERVSIPWVKWKAGLAP*SSKHLA Trigger: TGCCAAATGTTTACTGGAGCATGGTGCCAACCCAGC...TTTCCACTTCACCCAAGGGATGCTGACCCTCTCCACAACAGGACGTTCTTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | GGGGCATCTCTGATAAGGAGAGTAGAATATAAGGGCTTTCTGGTGACCTTGGGGGTGCATCCACTGCCTTaGAGACTTTGGACACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GASLIRRVEYKGFLVTLGVHPLP*RLWTQR Trigger: CCTCTGTGTCCAAAGTCTCCAAGGCAGTGGATGCAC...CCCCAAGGTCACCAGAAAGCCCTTATATTCTACTCTCCTTATCAGAGATGCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR TCA 90 bp | AACATTTTGAGGAGACTGATGTTAAATGGGGACAGTGATGTGGCTGGCTATTCTGGGTCTCCAACTCCATaGGCCCCAGCTTTGCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: NILRRLMLNGDSDVAGYSGSPTP*APALHA Trigger: TGCGTGCAAAGCTGGGGCTCATGGAGTTGGAGACCC...AGAATAGCCAGCCACATCACTGTCCCCATTTAACATCAGTCTCCTCAAAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | TTATTGAAGAGGACAGGAGTCATGCTGATTTTAGGGACATGCAGTGAAGGGGCAGCTGGTCCAGCTCGATaGCATACCAGTAACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLKRTGVMLILGTCSEGAAGPAR*HTSNLE Trigger: CTCCAGGTTACTGGTATGGCATCGAGCTGGACCAGC...TGCCCCTTCACTGCATGTCCCTAAAATCAGCATGACTCCTGTCCTCTTCAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | CTGTATTTAGGGAGTCGTCGTGGTGGGAGATCTGTTAATAATGGGACCTCAGTAGGGGGCTTCTGGAACTaGTTCGTCTTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYLGSRRGGRSVNNGTSVGGFWN*FVFFLL Trigger: GAGGAGGAAGAAGACGAACCAGTTCCAGAAGCCCCC...TACTGAGGTCCCATTATTAACAGATCTCCCACCACGACGACTCCCTAAATACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CCA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTCCCACTGGCGTACAATaGCGAACAGCTCTGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SIRVLYPCSKDGTSCLGSPTGVQ*RTALGW Trigger: CCATCCCAGAGCTGTTCGCCATTGTACGCCAGTGGG...AGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CCA 90 bp | ACTAAGAGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGAAGGGCGTTCATGTTaGTCCAGCGGCTGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSIRVLYPCSKDGTSCLEGRSC*SSGCAG Trigger: CCCTGCGCAGCCGCTGGACCAACATGAACGCCCTTC...CAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACTCTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CCA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGGCTCCAGTAAACATTTaGCAGCGCCCAGGCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWNLEVERLDDPWTKAPVNI*QRPGTD Trigger: ATCTGTGCCTGGGCGCTGCCAAATGTTTACTGGAGC...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CAA 72 bp | GGGACTAGCCTGAAGGTGCTACTCAGGGAATCTCTTTaGGGAAACATGAGGTCTGTATTTAGGGAGTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GTSLKVLLRESL*GNMRSVFRESS Trigger: CGACGACTCCCTAAATACAGACCTCATGTTTCCCAAAAGAGATTCCCTGAGTAGCACCTTCAGGCTAGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR TCA 90 bp | AGCTGGGGCCCATGGAATTTGGAGGTTGAGAGATTAGATGATCCATGGACTAAGGGAGATAGAGTTCTCTaGCGCAATGTCCTTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWNLEVERLDDPWTKGDRVL*RNVLWG Trigger: ACCCCAAAGGACATTGCGTCAGAGAACTCTATCTCC...CTTAGTCCATGGATCATCTAATCTCTCAACCTCCAAATTCCATGGGCCCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR GCA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTGATACGAGATGCTGGTaGAAAGACCCCATGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SIRVLYPCSKDGTSCLGSDTRCW*KDPMPR Trigger: CCGAGGCATGGGGTCTTTGCACCAGCATCTCGTATC...AGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTAATGGCGAACAGCTCTaGGATGGTGGTCTTCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIRVLYPCSKDGTSCLGSNGEQL*DGGLRV Trigger: GACCCGAAGACCACCATCCCAGAGCTGTTCGCCATT...AGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CCA 90 bp | AACATTTTGAGGAGACTGATGTTAAATGGGGACAGTGATGTGGCTGGCTATTCTCAAGGGACATGTCCATaGGGTCTGGGACCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NILRRLMLNGDSDVAGYSQGTCP*GLGPLP Trigger: CGGAAGTGGTCCCAGACCCCATGGACATGTCCCTTG...AGAATAGCCAGCCACATCACTGTCCCCATTTAACATCAGTCTCCTCAAAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CCA 90 bp | AACATTTTGAGGAGACTGATGTTAAATGGGGACAGTGATGTGGCTGGCTATTCTTGCAGAGCCGAGCCATaGTTGAAGTCACTGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NILRRLMLNGDSDVAGYSCRAEP*LKSLQV Trigger: CACCTGCAGTGACTTCAACCATGGCTCGGCTCTGCA...AGAATAGCCAGCCACATCACTGTCCCCATTTAACATCAGTCTCCTCAAAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR GCA 90 bp | AACATTTTGAGGAGACTGATGTTAAATGGGGACAGTGATGTGGCTGGCTATTCTGAGGCAAAGAGACCTTaGTTGGGAGGGCAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NILRRLMLNGDSDVAGYSEAKRP*LGGQMK Trigger: CTTCATCTGCCCTCCCAAGCAAGGTCTCTTTGCCTC...AGAATAGCCAGCCACATCACTGTCCCCATTTAACATCAGTCTCCTCAAAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CCA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTCCTGCCACAAGGACTTaGTCTCCAACTTCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIRVLYPCSKDGTSCLGSPATRT*SPTSAL Trigger: CAAAGCTGAAGTTGGAGACCAAGTCCTTGTGGCAGG...AGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | ACTAAGAGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGACAATCCCCTGCTTCTaGCCTGCCACAAGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSIRVLYPCSKDGTSCLTIPCF*PATRTW Trigger: CCAAGTCCTTGTGGCAGGCCAGAAGCAGGGGATTGT...CAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACTCTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CCA 90 bp | AGTATTAGAGTCCTCTATCCTTGTTCCAAAGATGGGACTTCCTGTTTGGGGTCTTCAAACAGAATTTCCTaGCACGCAGGGTCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIRVLYPCSKDGTSCLGSSNRIS*HAGSLG Trigger: TCCCAATGACCCTGCGTGCCAGGAAATTCTGTTTGA...AGACCCCAAACAGGAAGTCCCATCTTTGGAACAAGGATAGAGGACTCTAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CCA 90 bp | AACATTTTGAGGAGACTGATGTTAAATGGGGACAGTGATGTGGCTGGCTATTCTACAGCTCTGGGATGGTaGTCTTCGGGTCAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NILRRLMLNGDSDVAGYSTALGW*SSGQTE Trigger: TTCTGTTTGACCCGAAGACCACCATCCCAGAGCTGT...AGAATAGCCAGCCACATCACTGTCCCCATTTAACATCAGTCTCCTCAAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CAA 72 bp | ATAAGGAGAGTAGAATATAAGGGCTTTCTGGTGACCTaGGGGTCACAACATTTTGAGGAGACTGATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRRVEYKGFLVT*GSQHFEETDVK Trigger: TTTAACATCAGTCTCCTCAAAATGTTGTGACCCCAAGGTCACCAGAAAGCCCTTATATTCTACTCTCCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| 3UTR CAA 72 bp | CTTCTAGAGATCGTGGGGCTTGGAGGGATGGGAAATTaGGGGACATATATAATATATATTCTCTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLEIVGLGGMGN*GTYIIYILSGI Trigger: AATTCCAGAGAGAATATATATTATATATGTCCCCAAATTTCCCATCCCTCCAAGCCCCACGATCTCTAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 90 bp | CTGGCGAACTCAGTGGTCCCACAGAACCTCAGCGTGCCCGTCTTCTaGCCATCAAGGAGCACTCTGTCTCCTAGGCGCAGGCCCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LANSVVPQNLSVPVF*PSRSTLSPRRRPSA Trigger: CGCGCTGGGCCTGCGCCTAGGAGACAGAGTGCTCCTTGATGGGCAGAAGACGGGCACGCTGAGGTTCTGTGGGACCACTGAGTTCGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 90 bp | GCGCCCAGGCACAGATTCGAGGCAGCGATGTGCAGAGCCGAGCCATaGTTGAAGTCACTGCAGGTGGAGTTCACCACCCTGGGCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: APRHRFEAAMCRAEP*LKSLQVEFTTLGLA Trigger: GGCGAGGCCCAGGGTGGTGAACTCCACCTGCAGTGACTTCAACCATGGCTCGGCTCTGCACATCGCTGCCTCGAATCTGTGCCTGGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CCA 90 bp | CCTTGGCCACCAGGGCCGCCTCTGCCTTGTCAAGGGACATGTCCATaGGGTCTGGGACCACTTCCGCTGGCACCTGTCCCTTTCGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PWPPGPPLPCQGTCP*GLGPLPLAPVPFGS Trigger: GGAACCGAAAGGGACAGGTGCCAGCGGAAGTGGTCCCAGACCCCATGGACATGTCCCTTGACAAGGCAGAGGCGGCCCTGGTGGCCAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS TCA 90 bp | CCAGGCACAGATTCGAGGCAGCGATGTGCAGAGCCGAGCCATGGTTaGAGTCACTGCAGGTGGAGTTCACCACCCTGGGCCTCGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGTDSRQRCAEPSHG*SHCRWSSPPWASPP Trigger: AGGGGGCGAGGCCCAGGGTGGTGAACTCCACCTGCAGTGACTTCAACCATGGCTCGGCTCTGCACATCGCTGCCTCGAATCTGTGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 90 bp | CCCACTGGCCGCTGGCGAACTCAGTGGTCCCACAGAACCTCAGCGTaGCCGTCTTCTGCCCATCAAGGAGCACTCTGTCTCCTAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTGRWRTQWSHRTSA*PSSAHQGALCLLGA Trigger: TGCGCCTAGGAGACAGAGTGCTCCTTGATGGGCAGAAGACGGGCACGCTGAGGTTCTGTGGGACCACTGAGTTCGCCAGCGGCCAGTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | GTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCCGCAGGTGCTCCAGTAAACATTaGGCAGCGCCCAGGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VRAPGLLWTYGALRFSRRCSSKH*AAPRHR Trigger: TCTGTGCCTGGGCGCTGCCAAATGTTTACTGGAGCA...CCTGCGGGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 90 bp | GTTCATCTAGCTCCACGCCCACCCACTGGCCGCTGGCGAACTCAGTaGTCCCACAGAACCTCAGCGTGCCCGTCTTCTGCCCATCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VHLAPRPPTGRWRTQ*SHRTSACPSSAHQG Trigger: TCCTTGATGGGCAGAAGACGGGCACGCTGAGGTTCTGTGGGACCACTGAGTTCGCCAGCGGCCAGTGGGTGGGCGTGGAGCTAGATGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 90 bp | CAAAATAGGCGGCATAGTGAAGGGCGTTCATGTTGGTCCAGCGGCTaGGCAGGGTCACATCTGCGCCTAGCGCCAGCAGCTGCTGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QNRRHSEGRSCWSSG*AGSHLRLAPAAAVR Trigger: TCTCACAGCAGCTGCTGGCGCTAGGCGCAGATGTGACCCTGCGCAGCCGCTGGACCAACATGAACGCCCTTCACTATGCCGCCTATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 90 bp | GCTGGCACCTGTCCCTTTCGGTTCCTCAGTGCTGGGTTGGCACCATaGTCCAGTAAACATTTGGCAGCGCCCAGGCACAGATTCGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGTCPFRFLSAGLAP*SSKHLAAPRHRFEA Trigger: TGCCTCGAATCTGTGCCTGGGCGCTGCCAAATGTTTACTGGAGCATGGTGCCAACCCAGCACTGAGGAACCGAAAGGGACAGGTGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 90 bp | GATCCACCAATCCTCTGGATACGAGATGCTGGTGCAAAGACCCCATaGCTCGGGGCACAGGTAAAGTACCGGACGCCGAACACAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DPPILWIRDAGAKTP*LGAQVKYRTPNTEP Trigger: CGGCTCTGTGTTCGGCGTCCGGTACTTTACCTGTGCCCCGAGGCATGGGGTCTTTGCACCAGCATCTCGTATCCAGAGGATTGGTGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 90 bp | TTCGGTTCCTCAGTGCTGGGTTGGCACCATGCTCCAGTAAACATTTaGCAGCGCCCAGGCACAGATTCGAGGCAGCGATGTGCAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FGSSVLGWHHAPVNI*QRPGTDSRQRCAEP Trigger: CGGCTCTGCACATCGCTGCCTCGAATCTGTGCCTGGGCGCTGCCAAATGTTTACTGGAGCATGGTGCCAACCCAGCACTGAGGAACCGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 90 bp | CCTGCTTCTGGCCTGCCACAAGGACTTGGTCTCCAACTTCAGCTTTaGCCCCTTCACGCTGCTGCAGACTGCCCAGAGATGGGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PASGLPQGLGLQLQL*PLHAAADCPEMGKM Trigger: CATCTTCCCCATCTCTGGGCAGTCTGCAGCAGCGTGAAGGGGCCAAAGCTGAAGTTGGAGACCAAGTCCTTGTGGCAGGCCAGAAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | TTGGTGGTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCTGGCACGCAGGGTCATaGGGATCGAAGAAGGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVVRAPGLLWTYGALRFSWHAGS*GSKKVK Trigger: TTTTACCTTCTTCGATCCCAATGACCCTGCGTGCCA...GGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGACCACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | TGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCAGAGCCGAGCCATGGTaGAAGTCACTGCAGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WDFLFGVSWCLGVRFEMPRAEPW*KSLQVE Trigger: CTCCACCTGCAGTGACTTCAACCATGGCTCGGCTCT...GGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | GCCTGGGAGTCAGGTTTGAGATGCCCTGAGAGCCTGGCAACAGGGTCCTTCCTCTTCCTCAGTGCTGGGTaGGCACCATGCTCCAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AWESGLRCPESLATGSFLFLSAG*APCSSK Trigger: TTTACTGGAGCATGGTGCCAACCCAGCACTGAGGAA...GAGGAAGGACCCTGTTGCCAGGCTCTCAGGGCATCTCAAACCTGACTCCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | TCTCAGGGTACAGAGGGCAGGAAGACTTGCTGTCCTGTAATTCATGCTTCCAGGAGTGTCCGCAGTTCCTaGGCCACCAGGGCCGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQGTEGRKTCCPVIHASRSVRSS*ATRAAS Trigger: AGAGGCGGCCCTGGTGGCCAAGGAACTGCGGACACT...CCTGGAAGCATGAATTACAGGACAGCAAGTCTTCCTGCCCTCTGTACCCTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | GTCAGGGCCCCAGGTCTGCTCTGGACCTATGGGGCCCTCAGGTTCTCCCGCAGGGTTTGGGCTGTGTCATaGTCACTTGATGCACTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRAPGLLWTYGALRFSRRVWAVS*SLDALF Trigger: AAAAAGTGCATCAAGTGACAATGACACAGCCCAAAC...CCTGCGGGAGAACCTGAGGGCCCCATAGGTCCAGAGCAGACCTGGGGCCCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 90 bp | TTTGGCCCCTTCACGCTGCTGCAGACTGCCCAGAGATGGGGAAGATaGGGACTTCTTCTTCCCTTTGTGTTCTCTTCGGCCCTTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FGPFTLLQTAQRWGR*GLLLPFVFSSALAS Trigger: ACTGGCAAGGGCCGAAGAGAACACAAAGGGAAGAAGAAGTCCCCATCTTCCCCATCTCTGGGCAGTCTGCAGCAGCGTGAAGGGGCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | TGGGACTTCCTGTTTGGGGTCTCCTGGTGCCTGGGAGTCAGGTTTGAGATGCCCCCAATGACATCAATCTaGTGCTGGACTTGGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: WDFLFGVSWCLGVRFEMPPMTSI*CWTWGT Trigger: GGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGG...GGGCATCTCAAACCTGACTCCCAGGCACCAGGAGACCCCAAACAGGAAGTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCAAGGGCCGCCTCTGCCTaGTCAAGGGACATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LILGTCSEGAVVSCPWWSRAASA*SRDMSM Trigger: CATGGACATGTCCCTTGACAAGGCAGAGGCGGCCCT...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS-3UTR CAA 90 bp | CTGATTTTAGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTGGTGGTCAACAGAGCCGTCATGTTaGCCTGTGGGCTGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LILGTCSEGAVVSCPWWSTEPSC*PVGWSS Trigger: GCTGGACCAGCCCACAGGCAAACATGACGGCTCTGT...TGACCACCAAGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCTAAAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS TCA 90 bp | AGACTTTGGACACAGAGGCAAAGAGACCTTGCTTGGGAGGGCAGATaGAGTACCGGACACCCCCAACGCTGCCATCGTTCTTGCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLWTQRQRDLAWEGR*STGHPQRCHRSCLL Trigger: CAGAAGGCAAGAACGATGGCAGCGTTGGGGGTGTCCGGTACTTCATCTGCCCTCCCAAGCAAGGTCTCTTTGCCTCTGTGTCCAAAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 90 bp | TCGTTGCCAATGACATCAATCTTGTGCTGGACTTGGGGGACCCACTaGCGTACAATGGCGAACAGCTCTGGGATGGTGGTCTTCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPMTSILCWTWGTH*RTMANSSGMVVFGS Trigger: TGACCCGAAGACCACCATCCCAGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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| CDS CCA 90 bp | CAGCCACGACGAAGAATCTCGTTGCCAATGACATCAATCTTGTGCTaGACTTGGGGGACCCACTGGCGTACAATGGCGAACAGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QPRRRISLPMTSILC*TWGTHWRTMANSSG Trigger: CCCAGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGTGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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| CDS CCA 90 bp | AACTTCAGCTTTGGCCCCTTCACGCTGCTGCAGACTGCCCAGAGATaGGGAAGATGGGGACTTCTTCTTCCCTTTGTGTTCTCTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NFSFGPFTLLQTAQR*GRWGLLLPFVFSSA Trigger: GGCCGAAGAGAACACAAAGGGAAGAAGAAGTCCCCATCTTCCCCATCTCTGGGCAGTCTGCAGCAGCGTGAAGGGGCCAAAGCTGAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CAA 90 bp | GGGAGTCGTCGTGGTGGGAGATCTGTTAATAATGGGACCTCAGTAATCGAGGGCAATCTTGTGCTGGACTaGGGGGACCCACTGGCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GSRRGGRSVNNGTSVIEGNLVLD*GDPLAY Trigger: GTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATT...GCCCTCGATTACTGAGGTCCCATTATTAACAGATCTCCCACCACGACGACTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 90 bp | TGGCAGCCACGACGAAGAATCTCGTTGCCAATGACATCAATCTTGTaGTGGACTTGGGGGACCCACTGGCGTACAATGGCGAACAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WQPRRRISLPMTSIL*WTWGTHWRTMANSS Trigger: AGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGTGGCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS GCA 90 bp | CGAACACAGAGCCGTCATGTTTGCCTGTGGGCTGGTCCAGCTCGATaGCATACCAGTAACCTGGAGCAAAGTCAGTCTTCCCATAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTQSRHVCLWAGPAR*HTSNLEQSQSSHRS Trigger: GCTTCTATGGGAAGACTGACTTTGCTCCAGGTTACTGGTATGGCATCGAGCTGGACCAGCCCACAGGCAAACATGACGGCTCTGTGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CCA 90 bp | CGACGAAGAATCTCGTTGCCAATGACATCAATCTTGTGCTGGACTTaGGGGACCCACTGGCGTACAATGGCGAACAGCTCTGGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRRISLPMTSILCWT*GTHWRTMANSSGMV Trigger: CACCATCCCAGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGTCGTCGTGGTGGGAGATCTGTTAATAATGGGACCTCAGTAATCGAGGGCGGTGCATCCACTGCCTaGGAGACTTTGGACACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSRRGGRSVNNGTSVIEGGASTA*ETLDTE Trigger: CTCTGTGTCCAAAGTCTCCAAGGCAGTGGATGCACC...GCCCTCGATTACTGAGGTCCCATTATTAACAGATCTCCCACCACGACGACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS TCA 90 bp | CACGATCATTCACGTGGCAGCCACGACGAAGAATCTCGTTGCCAATaGCATCAATCTTGTGCTGGACTTGGGGGACCCACTGGCGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: HDHSRGSHDEESRCQ*HQSCAGLGGPTGVQ Trigger: TTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGTGGCTGCCACGTGAATGATCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAAGAACGTCCTGTTGTGGAGAGGGTCAGCATCCCTTGGGTGAAGTGGAAATGTTCTCTTCGGCCCTaGCCAGTTACACGGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TQERPVVERVSIPWVKWKCSLRP*PVTREK Trigger: CTTCTCCCGTGTAACTGGCAAGGGCCGAAGAGAACA...TTTCCACTTCACCCAAGGGATGCTGACCCTCTCCACAACAGGACGTTCTTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CAA 90 bp | GGGGCATCTCTGATAAGGAGAGTAGAATATAAGGGCTTTCTGGTGACCTTGGGGACGCTGCCATCGTTCTaGCCTTCTGGTTCATCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GASLIRRVEYKGFLVTLGTLPSF*PSGSSS Trigger: GCTAGATGAACCAGAAGGCAAGAACGATGGCAGCGT...CCCCAAGGTCACCAGAAAGCCCTTATATTCTACTCTCCTTATCAGAGATGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CAA 90 bp | CTGTATTTAGGGAGTCGTCGTGGTGGGAGATCTGTTAATAATGGGACCTCAGTAAGAGGCAAAGAGACCTaGCTTGGGAGGGCAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LYLGSRRGGRSVNNGTSVRGKET*LGRADE Trigger: TTCATCTGCCCTCCCAAGCAAGGTCTCTTTGCCTCT...TACTGAGGTCCCATTATTAACAGATCTCCCACCACGACGACTCCCTAAATACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS-3UTR CAA 90 bp | AACATTTTGAGGAGACTGATGTTAAATGGGGACAGTGATGTGGCTGGCTATTCTTCTCCAACTTCAGCTTaGGCCCCTTCACGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NILRRLMLNGDSDVAGYSSPTSA*APSRCC Trigger: GCAGCAGCGTGAAGGGGCCAAAGCTGAAGTTGGAGA...AGAATAGCCAGCCACATCACTGTCCCCATTTAACATCAGTCTCCTCAAAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS GCA 72 bp | CTGCGCAGGGTCACATCTGCGCCTAGCGCCAGCAGCTaGTGTGAGAGACGCACAGCGGCCGCAGGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRRVTSAPSASS*CERRTAAAGSP Trigger: TGGAGACCCTGCGGCCGCTGTGCGTCTCTCACAGCAGCTGCTGGCGCTAGGCGCAGATGTGACCCTGCGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 72 bp | GCTCCACGCCCACCCACTGGCCGCTGGCGAACTCAGTaGTCCCACAGAACCTCAGCGTGCCCGTCTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: APRPPTGRWRTQ*SHRTSACPSSA Trigger: GGCAGAAGACGGGCACGCTGAGGTTCTGTGGGACCACTGAGTTCGCCAGCGGCCAGTGGGTGGGCGTGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CCA 72 bp | CCAGGGCCGCCTCTGCCTTGTCAAGGGACATGTCCATaGGGTCTGGGACCACTTCCGCTGGCACCTGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGPPLPCQGTCP*GLGPLPLAPVP Trigger: AGGGACAGGTGCCAGCGGAAGTGGTCCCAGACCCCATGGACATGTCCCTTGACAAGGCAGAGGCGGCCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 90 bp | CCCAGGCACAGATTCGAGGCAGCGATGTGCAGAGCCGAGCCATGGTaGAAGTCACTGCAGGTGGAGTTCACCACCCTGGGCCTCGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PRHRFEAAMCRAEPW*KSLQVEFTTLGLAP Trigger: GGGGGCGAGGCCCAGGGTGGTGAACTCCACCTGCAGTGACTTCAACCATGGCTCGGCTCTGCACATCGCTGCCTCGAATCTGTGCCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS GCA 72 bp | CGGCATAGTGAAGGGCGTTCATGTTGGTCCAGCGGCTaGGCAGGGTCACATCTGCGCCTAGCGCCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RHSEGRSCWSSG*AGSHLRLAPAA Trigger: AGCTGCTGGCGCTAGGCGCAGATGTGACCCTGCGCAGCCGCTGGACCAACATGAACGCCCTTCACTATGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CCA 72 bp | CTGGTTCATCTAGCTCCACGCCCACCCACTGGCCGCTaGCGAACTCAGTGGTCCCACAGAACCTCAGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVHLAPRPPTGR*RTQWSHRTSAC Trigger: GCACGCTGAGGTTCTGTGGGACCACTGAGTTCGCCAGCGGCCAGTGGGTGGGCGTGGAGCTAGATGAACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CAA 90 bp | TCTAGGAGTGTCCGCAGTTCCTTGGCCACCAGGGCCGCCTCTGCCTaGTCAAGGGACATGTCCATGGGGTCTGGGACCACTTCCGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSVRSSLATRAASA*SRDMSMGSGTTSAG Trigger: GCCAGCGGAAGTGGTCCCAGACCCCATGGACATGTCCCTTGACAAGGCAGAGGCGGCCCTGGTGGCCAAGGAACTGCGGACACTCCTAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS TCA 72 bp | GATTCGAGGCAGCGATGTGCAGAGCCGAGCCATGGTTaGAGTCACTGCAGGTGGAGTTCACCACCCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DSRQRCAEPSHG*SHCRWSSPPWA Trigger: GGCCCAGGGTGGTGAACTCCACCTGCAGTGACTTCAACCATGGCTCGGCTCTGCACATCGCTGCCTCGAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 72 bp | TCAGTGGTCCCACAGAACCTCAGCGTGCCCGTCTTCTaGCCATCAAGGAGCACTCTGTCTCCTAGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVVPQNLSVPVF*PSRSTLSPRRR Trigger: CCTGCGCCTAGGAGACAGAGTGCTCCTTGATGGGCAGAAGACGGGCACGCTGAGGTTCTGTGGGACCACTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CCA 72 bp | GGGCCTCGCCCCCTTCAGCAGCACGCGAACAAGGTCTaGCACATCAAAATAGGCGGCATAGTGAAGGGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: GPRPLQQHANKV*HIKIGGIVKGV Trigger: AACGCCCTTCACTATGCCGCCTATTTTGATGTGCCAGACCTTGTTCGCGTGCTGCTGAAGGGGGCGAGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CCA 72 bp | ACCGGACGCCGAACACAGAGCCGTCATGTTTGCCTGTaGGCTGGTCCAGCTCGATGCCATACCAGTAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: TGRRTQSRHVCL*AGPARCHTSNL Trigger: CAGGTTACTGGTATGGCATCGAGCTGGACCAGCCCACAGGCAAACATGACGGCTCTGTGTTCGGCGTCCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CAA 72 bp | AGATTCGAGGCAGCGATGTGCAGAGCCGAGCCATGGTaGAAGTCACTGCAGGTGGAGTTCACCACCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RFEAAMCRAEPW*KSLQVEFTTLG Trigger: GCCCAGGGTGGTGAACTCCACCTGCAGTGACTTCAACCATGGCTCGGCTCTGCACATCGCTGCCTCGAATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 72 bp | GCTGGCACCTGTCCCTTTCGGTTCCTCAGTGCTGGGTaGGCACCATGCTCCAGTAAACATTTGGCAGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGTCPFRFLSAG*APCSSKHLAAP Trigger: GGGCGCTGCCAAATGTTTACTGGAGCATGGTGCCAACCCAGCACTGAGGAACCGAAAGGGACAGGTGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 72 bp | GCGCACAATCCCCTGCTTCTGGCCTGCCACAAGGACTaGGTCTCCAACTTCAGCTTTGGCCCCTTCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AHNPLLLACHKD*VSNFSFGPFTL Trigger: CAGCGTGAAGGGGCCAAAGCTGAAGTTGGAGACCAAGTCCTTGTGGCAGGCCAGAAGCAGGGGATTGTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CAA 90 bp | CCCTGCTTCTGGCCTGCCACAAGGACTTGGTCTCCAACTTCAGCTTaGGCCCCTTCACGCTGCTGCAGACTGCCCAGAGATGGGGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PCFWPATRTWSPTSA*APSRCCRLPRDGED Trigger: ATCTTCCCCATCTCTGGGCAGTCTGCAGCAGCGTGAAGGGGCCAAAGCTGAAGTTGGAGACCAAGTCCTTGTGGCAGGCCAGAAGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 90 bp | TTTCGGTTCCTCAGTGCTGGGTTGGCACCATGCTCCAGTAAACATTaGGCAGCGCCCAGGCACAGATTCGAGGCAGCGATGTGCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FRFLSAGLAPCSSKH*AAPRHRFEAAMCRA Trigger: GGCTCTGCACATCGCTGCCTCGAATCTGTGCCTGGGCGCTGCCAAATGTTTACTGGAGCATGGTGCCAACCCAGCACTGAGGAACCGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 90 bp | CCCATAGAAGCGCACAATCCCCTGCTTCTGGCCTGCCACAAGGACTaGGTCTCCAACTTCAGCTTTGGCCCCTTCACGCTGCTGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PIEAHNPLLLACHKD*VSNFSFGPFTLLQT Trigger: AGTCTGCAGCAGCGTGAAGGGGCCAAAGCTGAAGTTGGAGACCAAGTCCTTGTGGCAGGCCAGAAGCAGGGGATTGTGCGCTTCTATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 72 bp | ATCCTCTGGATACGAGATGCTGGTGCAAAGACCCCATaGCTCGGGGCACAGGTAAAGTACCGGACGCCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ILWIRDAGAKTP*LGAQVKYRTPN Trigger: GTTCGGCGTCCGGTACTTTACCTGTGCCCCGAGGCATGGGGTCTTTGCACCAGCATCTCGTATCCAGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 72 bp | GGGATCAGTGGATCCACCAATCCTCTGGATACGAGATaGTGGTGCAAAGACCCCATGCCTCGGGGCACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GISGSTNPLDTR*WCKDPMPRGTG Trigger: ACCTGTGCCCCGAGGCATGGGGTCTTTGCACCAGCATCTCGTATCCAGAGGATTGGTGGATCCACTGATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 72 bp | TCTTGTGCTGGACTTGGGGGACCCACTGGCGTACAATaGCGAACAGCTCTGGGATGGTGGTCTTCGGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SCAGLGGPTGVQ*RTALGWWSSGQ Trigger: TTGACCCGAAGACCACCATCCCAGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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| CDS CCA 72 bp | CACAGATTCGAGGCAGCGATGTGCAGAGCCGAGCCATaGTTGAAGTCACTGCAGGTGGAGTTCACCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HRFEAAMCRAEP*LKSLQVEFTTL Trigger: CAGGGTGGTGAACTCCACCTGCAGTGACTTCAACCATGGCTCGGCTCTGCACATCGCTGCCTCGAATCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 72 bp | CTGGCACCTGTCCCTTTCGGTTCCTCAGTGCTGGGTTaGCACCATGCTCCAGTAAACATTTGGCAGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LAPVPFGSSVLG*HHAPVNIWQRP Trigger: TGGGCGCTGCCAAATGTTTACTGGAGCATGGTGCCAACCCAGCACTGAGGAACCGAAAGGGACAGGTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 72 bp | TGGCCTGCCACAAGGACTTGGTCTCCAACTTCAGCTTaGGCCCCTTCACGCTGCTGCAGACTGCCCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: WPATRTWSPTSA*APSRCCRLPRD Trigger: ATCTCTGGGCAGTCTGCAGCAGCGTGAAGGGGCCAAAGCTGAAGTTGGAGACCAAGTCCTTGTGGCAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 72 bp | GTAAAGTACCGGACGCCGAACACAGAGCCGTCATGTTaGCCTGTGGGCTGGTCCAGCTCGATGCCATACCAG | + |
|
Preference number: 6 (lower is better) Translates to: VKYRTPNTEPSC*PVGWSSSMPYQ Trigger: CTGGTATGGCATCGAGCTGGACCAGCCCACAGGCAAACATGACGGCTCTGTGTTCGGCGTCCGGTACTTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS TCA 72 bp | ACACAGAGGCAAAGAGACCTTGCTTGGGAGGGCAGATaGAGTACCGGACACCCCCAACGCTGCCATCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TQRQRDLAWEGR*STGHPQRCHRS Trigger: AGAACGATGGCAGCGTTGGGGGTGTCCGGTACTTCATCTGCCCTCCCAAGCAAGGTCTCTTTGCCTCTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 72 bp | TGTCCCTTTCGGTTCCTCAGTGCTGGGTTGGCACCATaGTCCAGTAAACATTTGGCAGCGCCCAGGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: CPFRFLSAGLAP*SSKHLAAPRHR Trigger: TCTGTGCCTGGGCGCTGCCAAATGTTTACTGGAGCATGGTGCCAACCCAGCACTGAGGAACCGAAAGGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS GCA 72 bp | GGGACTTCTTCTTCCCTTTGTGTTCTCTTCGGCCCTTaGCAGTTACACGGGAGAAGTCCATCCGGGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTSSSLCVLFGP*QLHGRSPSGES Trigger: GGACTCCCCGGATGGACTTCTCCCGTGTAACTGGCAAGGGCCGAAGAGAACACAAAGGGAAGAAGAAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 72 bp | CATCAAAATAGGCGGCATAGTGAAGGGCGTTCATGTTaGTCCAGCGGCTGCGCAGGGTCACATCTGCGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: HQNRRHSEGRSC*SSGCAGSHLRL Trigger: TAGGCGCAGATGTGACCCTGCGCAGCCGCTGGACCAACATGAACGCCCTTCACTATGCCGCCTATTTTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 72 bp | TCAGTGCTGGGTTGGCACCATGCTCCAGTAAACATTTaGCAGCGCCCAGGCACAGATTCGAGGCAGCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: SVLGWHHAPVNI*QRPGTDSRQRC Trigger: ACATCGCTGCCTCGAATCTGTGCCTGGGCGCTGCCAAATGTTTACTGGAGCATGGTGCCAACCCAGCACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 72 bp | GGGGACTTCTTCTTCCCTTTGTGTTCTCTTCGGCCCTaGCCAGTTACACGGGAGAAGTCCATCCGGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GDFFFPLCSLRP*PVTREKSIRGV Trigger: GACTCCCCGGATGGACTTCTCCCGTGTAACTGGCAAGGGCCGAAGAGAACACAAAGGGAAGAAGAAGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 90 bp | ACGTGGCAGCCACGACGAAGAATCTCGTTGCCAATGACATCAATCTaGTGCTGGACTTGGGGGACCCACTGGCGTACAATGGCGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: TWQPRRRISLPMTSI*CWTWGTHWRTMANS Trigger: GCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGTGGCTGCCACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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| CDS GCA 72 bp | AGCCGTCATGTTTGCCTGTGGGCTGGTCCAGCTCGATaGCATACCAGTAACCTGGAGCAAAGTCAGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRHVCLWAGPAR*HTSNLEQSQSS Trigger: GGAAGACTGACTTTGCTCCAGGTTACTGGTATGGCATCGAGCTGGACCAGCCCACAGGCAAACATGACGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CCA 72 bp | TTGGGGGACCCACTGGCGTACAATGGCGAACAGCTCTaGGATGGTGGTCTTCGGGTCAAACAGAATTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGDPLAYNGEQL*DGGLRVKQNFL Trigger: CAGGAAATTCTGTTTGACCCGAAGACCACCATCCCAGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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| CDS CCA 72 bp | ATGACATCAATCTTGTGCTGGACTTGGGGGACCCACTaGCGTACAATGGCGAACAGCTCTGGGATGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MTSILCWTWGTH*RTMANSSGMVV Trigger: GACCACCATCCCAGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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| CDS CCA 72 bp | TTCACGCTGCTGCAGACTGCCCAGAGATGGGGAAGATaGGGACTTCTTCTTCCCTTTGTGTTCTCTTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FTLLQTAQRWGR*GLLLPFVFSSA Trigger: GGCCGAAGAGAACACAAAGGGAAGAAGAAGTCCCCATCTTCCCCATCTCTGGGCAGTCTGCAGCAGCGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
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| CDS CAA 90 bp | AGCCCATCACGATCATTCACGTGGCAGCCACGACGAAGAATCTCGTaGCCAATGACATCAATCTTGTGCTGGACTTGGGGGACCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPSRSFTWQPRRRIS*PMTSILCWTWGTHW Trigger: CCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGTGGCTGCCACGTGAATGATCGTGATGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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| CDS TCA 72 bp | TCACGTGGCAGCCACGACGAAGAATCTCGTTGCCAATaGCATCAATCTTGTGCTGGACTTGGGGGACCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SRGSHDEESRCQ*HQSCAGLGGPT Trigger: AGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGTGGCTGCCACGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS GCA 72 bp | CGACGAAGAATCTCGTTGCCAATGACATCAATCTTGTaGTGGACTTGGGGGACCCACTGGCGTACAATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRRISLPMTSIL*WTWGTHWRTMA Trigger: CGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS CCA 72 bp | ATCAGTGGATCCACCAATCCTCTGGATACGAGATGCTaGTGCAAAGACCCCATGCCTCGGGGCACAGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISGSTNPLDTRC*CKDPMPRGTGK Trigger: TTTACCTGTGCCCCGAGGCATGGGGTCTTTGCACCAGCATCTCGTATCCAGAGGATTGGTGGATCCACTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014065.16 |
||
| CDS CAA 90 bp | ACGACGAAGAATCTCGTTGCCAATGACATCAATCTTGTGCTGGACTaGGGGGACCCACTGGCGTACAATGGCGAACAGCTCTGGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: TTKNLVANDINLVLD*GDPLAYNGEQLWDG Trigger: ACCATCCCAGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS CCA 72 bp | ATCTCGTTGCCAATGACATCAATCTTGTGCTGGACTTaGGGGACCCACTGGCGTACAATGGCGAACAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISLPMTSILCWT*GTHWRTMANSS Trigger: AGAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS CCA 72 bp | CGAAGAATCTCGTTGCCAATGACATCAATCTTGTGCTaGACTTGGGGGACCCACTGGCGTACAATGGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RRISLPMTSILC*TWGTHWRTMAN Trigger: GTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS CAA 72 bp | AATCTCGTTGCCAATGACATCAATCTTGTGCTGGACTaGGGGGACCCACTGGCGTACAATGGCGAACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NLVANDINLVLD*GDPLAYNGEQL Trigger: GAGCTGTTCGCCATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS CAA 72 bp | CCACGACGAAGAATCTCGTTGCCAATGACATCAATCTaGTGCTGGACTTGGGGGACCCACTGGCGTACAATG | + |
|
Preference number: 6 (lower is better) Translates to: PRRRISLPMTSI*CWTWGTHWRTM Trigger: CATTGTACGCCAGTGGGTCCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
||
| CDS CAA 72 bp | CGATCATTCACGTGGCAGCCACGACGAAGAATCTCGTaGCCAATGACATCAATCTTGTGCTGGACTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: RSFTWQPRRRIS*PMTSILCWTWG Trigger: CCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAACGAGATTCTTCGTCGTGGCTGCCACGTGAATGATCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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| CDS CCA 72 bp | TCTGGGATGGTGGTCTTCGGGTCAAACAGAATTTCCTaGCACGCAGGGTCATTGGGATCGAAGAAGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: SGMVVFGSNRIS*HAGSLGSKKVK Trigger: TTTTACCTTCTTCGATCCCAATGACCCTGCGTGCCAGGAAATTCTGTTTGACCCGAAGACCACCATCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014065.16 ENSMUST00000126216.2 ENSMUST00000144508.2 ENSMUST00000150892.2 |
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| CDS CCA 72 bp | AGTGTCATATCTGTGAGCCCATCACGATCATTCACGTaGCAGCCACGACGAAGAATCTCGTTGCCAATGACA | + |
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Preference number: 6 (lower is better) Translates to: SVISVSPSRSFT*QPRRRISLPMT Trigger: TGTCATTGGCAACGAGATTCTTCGTCGTGGCTGCCACGTGAATGATCGTGATGGGCTCACAGATATGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014065.16 ENSMUST00000150892.2 |
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