RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLIP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063146

Ensembl transcript IDs: ENSMUST00000036999.10, ENSMUST00000100647.7

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTaGAAGGCCGTGTCTGTGGGAGCCTCCTGGTCCGGCAGGGGGTTC +
Preference number: 1 (lower is better)
Translates to: TREVLQGWAQLYRAL*KAVSVGASWSGRGF
Trigger: GAACCCCCTGCCGGACCAGGAGGCTCCCACAGACACGGCCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 90 bp TGCCAGTTCACGAAGCTCCTTGGGACAAGAGAGGTTCTCCAGGGCTaGGCCCAGCTGTACCGCGCTCTGTGGAAGGCCGTGTCTGTGGGA +
Preference number: 1 (lower is better)
Translates to: CQFTKLLGTREVLQG*AQLYRALWKAVSVG
Trigger: TCCCACAGACACGGCCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCCCAAGGAGCTTCGTGAACTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR GCA 90 bp AGTCAGCTCCTCCCTAAGGACGAGAGCGTGAGCGCCACCTTCTGGTaGCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATT +
Preference number: 1 (lower is better)
Translates to: SQLLPKDESVSATFW*LVALTQATWAILRI
Trigger: AATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTCTCGTCCTTAGGGAGGAGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR TCA 90 bp AGGAGGGGCTCAATGCGTGGAGTCAAGCATTCCCTCCCTAGTTTCTaGAGCCCTTCTTGGTGTGTTCTGTGTCCAAGCAGGGGCCCTGCT +
Preference number: 1 (lower is better)
Translates to: RRGSMRGVKHSLPSF*SPSWCVLCPSRGPA
Trigger: AGCAGGGCCCCTGCTTGGACACAGAACACACCAAGAAGGGCTTCAGAAACTAGGGAGGGAATGCTTGACTCCACGCATTGAGCCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR GCA 90 bp AAGCCAGTCCCAGCTCAAGGTAAAGGTAAGAAGCGTGGGTTCGCGTaGTCGCTGAATACTGAAGCTGTCTGCTCAGTGCCTTCCGGGCAG +
Preference number: 1 (lower is better)
Translates to: KPVPAQGKGKKRGFA*SLNTEAVCSVPSGQ
Trigger: CTGCCCGGAAGGCACTGAGCAGACAGCTTCAGTATTCAGCGAGCACGCGAACCCACGCTTCTTACCTTTACCTTGAGCTGGGACTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 90 bp TACCACTGTGGTCCTGCCCTGGGAAGATGGAAGCAGGGCTCTCTCTaGGTTGCTGGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAA +
Preference number: 1 (lower is better)
Translates to: YHCGPALGRWKQGSL*VAGVFRVTWQGFPE
Trigger: TTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCCAGCAACCCAGAGAGAGCCCTGCTTCCATCTTCCCAGGGCAGGACCACAGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR TCA 90 bp TCCGGCAGGGGGTTCAGGTGGGACGTGTCCACGTGTCCACGGCAGTaGGGACAATATTGTTACAAACACAGTCACATCTCCAAGGGGACA +
Preference number: 1 (lower is better)
Translates to: SGRGFRWDVSTCPRQ*GQYCYKHSHISKGT
Trigger: TGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTGGACACGTGGACACGTCCCACCTGAACCCCCTGCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR GCA 90 bp TTGTTACAAACACAGTCACATCTCCAAGGGGACAGTTCTGACTCCTaGCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTG +
Preference number: 1 (lower is better)
Translates to: LLQTQSHLQGDSSDS*LKVALLGSLVGLLV
Trigger: CACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGGCAGGAGTCAGAACTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 90 bp TTCCTAATCCGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTaGCTCTGCAGACGGGCCACTAAAGCGTCAGTTCTAGGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: FLIRELPDCAGKSKI*LCRRATKASVLGCC
Trigger: ACAGCAGCCTAGAACTGACGCTTTAGTGGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACGGATTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CCA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCGGCCTGCGGGGGACCTaGGGACACAGAAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPGLRGT*GHRREG
Trigger: CCCTTCCCTTCTGTGTCCCCAGGTCCCCCGCAGGCC...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR GCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCTCCAAGCAGGGGCCCTaGTCCATCCCTCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVSKQGP*SIPQGP
Trigger: AGGCCCCTGAGGGATGGAGCAGGGCCCCTGCTTGGA...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR TCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCGTTCTGACTCCTGCCTaGAGGTGGCGCTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACVLTPA*RWRCWE
Trigger: TTCCCAGCAGCGCCACCTTCAGGCAGGAGTCAGAAC...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCTGTACCGCGCTCTGTaGAAGGCCGTGTCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVLYRAL*KAVSVG
Trigger: TCCCACAGACACGGCCTTCCACAGAGCGCGGTACAG...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCAAGAGAGGCCCAACTaGATCGCTTCAGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGQERPN*IASASA
Trigger: GGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTG...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR TCA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCAGCAGGGGGTTGGGCTaGGGGGCTGCTAAGTCAGCT +
Preference number: 2 (lower is better)
Translates to: RELPDCAGKSKIWLCRRASRGLG*GAAKSA
Trigger: AGCTGACTTAGCAGCCCCTCAGCCCAACCCCCTGCT...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCAAGCAGGGCTCTCTCTaGGTTGCTGGGGTCTTTAGA +
Preference number: 2 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVKQGSL*VAGVFR
Trigger: TCTAAAGACCCCAGCAACCCAGAGAGAGCCCTGCTT...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGCTGTACCGCGCTCTGTaGAAGGCCGTGTCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRLYRAL*KAVSVG
Trigger: TCCCACAGACACGGCCTTCCACAGAGCGCGGTACAG...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CAA 90 bp GTTCAGGTGGGACGTGTCCACGTGTCCACGGCAGTGAGGACAATATaGTTACAAACACAGTCACATCTCCAAGGGGACAGTTCTGACTCC +
Preference number: 2 (lower is better)
Translates to: VQVGRVHVSTAVRTI*LQTQSHLQGDSSDS
Trigger: GGAGTCAGAACTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTGGACACGTGGACACGTCCCACCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR TCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGGTTCTGACTCCTGCCTaGAGGTGGCGCTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLVLTPA*RWRCWE
Trigger: TTCCCAGCAGCGCCACCTTCAGGCAGGAGTCAGAAC...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGCAAGAGAGGCCCAACTaGATCGCTTCAGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLQERPN*IASASA
Trigger: GGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTG...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR TCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGGTGCTCGCTGAATACTaGAGCTGTCTGCTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLVLAEY*SCLLSA
Trigger: GGCACTGAGCAGACAGCTTCAGTATTCAGCGAGCAC...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR TCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGTCCCTCCCTAGTTTCTaGAGCCCTTCTTGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLSLPSF*SPSWCV
Trigger: AACACACCAAGAAGGGCTTCAGAAACTAGGGAGGGA...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp GTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTaGAAGGCCGTGTCTGTGGGAGCCTCCTGGTCCGGC +
Preference number: 3 (lower is better)
Translates to: VLQGWAQLYRAL*KAVSVGASWSG
Trigger: GCCGGACCAGGAGGCTCCCACAGACACGGCCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp CTCCTCCCTAAGGACGAGAGCGTGAGCGCCACCTTCTaGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCC +
Preference number: 3 (lower is better)
Translates to: LLPKDESVSATF*CLVALTQATWA
Trigger: GGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTCTCGTCCTTAGGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR GCA 72 bp CTCCCTAAGGACGAGAGCGTGAGCGCCACCTTCTGGTaGCTAGTGGCGCTCACACAGGCCACCTGGGCCATC +
Preference number: 3 (lower is better)
Translates to: LPKDESVSATFW*LVALTQATWAI
Trigger: GATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTCTCGTCCTTAGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp TCTTGCACACCTACCAGGTGCAAGCCCACTCCAGGGTaGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGC +
Preference number: 3 (lower is better)
Translates to: SCTPTRCKPTPG*GSAPSGPFRGS
Trigger: GCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGCAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp ACGAAGCTCCTTGGGACAAGAGAGGTTCTCCAGGGCTaGGCCCAGCTGTACCGCGCTCTGTGGAAGGCCGTG +
Preference number: 3 (lower is better)
Translates to: TKLLGTREVLQG*AQLYRALWKAV
Trigger: CACGGCCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCCCAAGGAGCTTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp GTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTaGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCC +
Preference number: 3 (lower is better)
Translates to: VQAHSRVGLSPF*SLPWEPLAVNS
Trigger: GGAATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp GGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTaGGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: GSLQPLPVHEAP*DKRGSPGLGPA
Trigger: AGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR GCA 72 bp ACACAGTCACATCTCCAAGGGGACAGTTCTGACTCCTaGCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGG +
Preference number: 3 (lower is better)
Translates to: TQSHLQGDSSDS*LKVALLGSLVG
Trigger: CCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGGCAGGAGTCAGAACTGTCCCCTTGGAGATGTGACTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp GGTCCTGCCCTGGGAAGATGGAAGCAGGGCTCTCTCTaGGTTGCTGGGGTCTTTAGAGTAACATGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: GPALGRWKQGSL*VAGVFRVTWQG
Trigger: CCCCTGCCATGTTACTCTAAAGACCCCAGCAACCCAGAGAGAGCCCTGCTTCCATCTTCCCAGGGCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTaGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCC +
Preference number: 3 (lower is better)
Translates to: AAAACYSQERPN*IASASASSRSS
Trigger: GGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR GCA 72 bp CTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTaGAGACGGGCCACTAAAGCGTCAGTTCTAGGCTGC +
Preference number: 3 (lower is better)
Translates to: LPDCAGKSKIWL*RRATKASVLGC
Trigger: GCAGCCTAGAACTGACGCTTTAGTGGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR GCA 72 bp CCAGCTCAAGGTAAAGGTAAGAAGCGTGGGTTCGCGTaGTCGCTGAATACTGAAGCTGTCTGCTCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: PAQGKGKKRGFA*SLNTEAVCSVP
Trigger: AGGCACTGAGCAGACAGCTTCAGTATTCAGCGAGCACGCGAACCCACGCTTCTTACCTTTACCTTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CCA 72 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTaGCTCTGCAGACGGGCCACTAAAGCGTCAGTTCTA +
Preference number: 3 (lower is better)
Translates to: RELPDCAGKSKI*LCRRATKASVL
Trigger: TAGAACTGACGCTTTAGTGGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CAA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCATTTTCTACCTGTTCTaGGTTCTAAGCCCCAAGCCA +
Preference number: 3 (lower is better)
Translates to: RELPDCAGKSKIWLCRRAIFYLF*VLSPKP
Trigger: TGGCTTGGGGCTTAGAACCAAGAACAGGTAGAAAAT...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR TCA 72 bp GGGTTCAGGTGGGACGTGTCCACGTGTCCACGGCAGTaGGGACAATATTGTTACAAACACAGTCACATCTCC +
Preference number: 3 (lower is better)
Translates to: GFRWDVSTCPRQ*GQYCYKHSHIS
Trigger: GGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTGGACACGTGGACACGTCCCACCTGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CAA 90 bp GTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCCGCAGTGAGGACAATATaGTTACAAACACAGTCACAT +
Preference number: 3 (lower is better)
Translates to: VGLSPFWSLPWEPLAVNSAVRTI*LQTQSH
Trigger: ATGTGACTGTGTTTGTAACAATATTGTCCTCACTGC...GGAATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CAA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGAGCAGTGAGGACAATATaGTTACAAACACAGTCACAT +
Preference number: 3 (lower is better)
Translates to: ERPNWIASASASSRSSLGAVRTI*LQTQSH
Trigger: ATGTGACTGTGTTTGTAACAATATTGTCCTCACTGC...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CAA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACCGCTGTAGGAATGCTTaGTTTAAGGAATTTTCTACC +
Preference number: 3 (lower is better)
Translates to: WCLVALTQATWAILRIYHRCRNA*FKEFST
Trigger: GGTAGAAAATTCCTTAAACAAAGCATTCCTACAGCG...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CAA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGTGGAAAGAGCAAGATTaGGCTCTGCAGACGGGCCAC +
Preference number: 3 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLWKEQD*ALQTGH
Trigger: GTGGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCA...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR-3UTR CAA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCATTTTCTACCTGTTCTaGGTTCTAAGCCCCAAGCCA +
Preference number: 3 (lower is better)
Translates to: PQSQALLSEHGLATLPQFIFYLF*VLSPKP
Trigger: TGGCTTGGGGCTTAGAACCAAGAACAGGTAGAAAAT...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCGCTCCAGCTCCCCAATaGGCGCGTGCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGAPAPQ*ARAPAG
Trigger: CCCAGCTGGAGCACGCGCGCATTGGGGAGCTGGAGC...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCGCTTGGAGGGCCGCGTaGAGATGCCCTGTAGAGCCG +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACAWRAA*RCPVEP
Trigger: CGGCTCTACAGGGCATCTTCACGCGGCCCTCCAAGC...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCACCCAACGGACGGCCTaGCCACGGGGCTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVTQRTA*PRGWSA
Trigger: AGCACTCCAGCCCCGTGGGCAGGCCGTCCGTTGGGT...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCCGATGCTGGCTGGCCTaGTCCTCCAGCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACRCWLA*SSSCSL
Trigger: GAGGGAGCAGCTGGAGGAGCAGGCCAGCCAGCATCG...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCGCTCGGCCTCCTGCCTaGTCTGGGCTTCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVARPPA*SGLRPS
Trigger: AGAGGGCCGAAGCCCAGAGCAGGCAGGAGGCCGAGC...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAGCCGCTCGGCCTCCTaGCTGCTCTGGGCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVSRSAS*LLWASA
Trigger: GGCCGAAGCCCAGAGCAGGCAGGAGGCCGAGCGGCT...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCTCCACCTGCTGGGCCTaGTTCAGCGCATCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGSTCWA*FSASRR
Trigger: CCTGCGGGATGCGCTGAACCAGGCCCAGCAGGTGGA...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCTGCGGGTGGCGGGCCTaGCTGGAGGAGACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVCGWRA*LEETVL
Trigger: CAACACTGTCTCCTCCAGTCAGGCCCGCCACCCGCA...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCATGGCTGTGCTGGGCTaGGCACAGGGACTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPMAVLG*AQGLGS
Trigger: GCTGCCGAGTCCCTGTGCTCAGCCCAGCACAGCCAT...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAGCTGCTCCCTCCAGTaGTGCTGCAGCCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVSCSLQ*CCSPAS
Trigger: GCTGGCCGGGCTGCAGCAGCACTGGAGGGAGCAGCT...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTCCCCAATGCGCGCGTaGTCCAGCTGGGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPSPMRA*SSWVWV
Trigger: GACCCAGACCCAGCTGGAGCACGCGCGCATTGGGGA...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCTCTCAGAGACGGTGGTaGCGGCTCCAGACGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACSQRRW*RLQTRR
Trigger: CCTCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGA...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCCCCTCAGCGGTGGGCTaGCGGGTCAGCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVPSAVG*RVSLEG
Trigger: GCCCTCCAAGCTGACCCGCCAGCCCACCGCTGAGGG...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCGGCCAGAGTTCAGCGTaGCCTTCAGGTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACGQSSA*PSGPPG
Trigger: CCCTGGAGGACCTGAAGGCCACGCTGAACTCTGGCC...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCAGCCGATGCTGGCTaGCCTGCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVPADAG*PAPPAA
Trigger: AGCAGCTGGAGGAGCAGGCCAGCCAGCATCGGCTGG...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCGCTGGTGCTCCATCTTaGTGCCCTCTACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACAGAPS*CPLPGP
Trigger: AGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGC...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCAGGAACTCGATGGCTTaGGCCTGGCCACGGTACTCC +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGRNSMA*AWPRYS
Trigger: GGAGTACCGTGGCCAGGCTCAAGCCATCGAGTTCCT...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTGGTCTGAGTCCTGTCTaGGCAGCCCCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVGLSPV*AAPQGL
Trigger: GAGGCCCTGAGGGGCTGCTCAGACAGGACTCAGACC...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCTATCCGCTAATTCTCTaGGCAGCCGCTCGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGYPLIL*AAARPA
Trigger: CGCAGGCCGAGCGGCTGCTCAGAGAATTAGCGGATA...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCGAGGAGGGGCCCGATaGCTGTTTGTGCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVRGGAR*LFVQGR
Trigger: TCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCG...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTGGAAGGGTGGGGGCGTGGCCGTaGCAGAATGCAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GQERFSRAGPSCTALCGRVGAWP*QNAGTG
Trigger: ACCTGTCCCTGCATTCTGGCACGGCCACGCCCCCAC...CCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTCGATGCTGGCTGGCCTaGTCCTCCAGCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVRCWLA*SSSCSL
Trigger: GAGGGAGCAGCTGGAGGAGCAGGCCAGCCAGCATCG...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTTGGAGCTCCAGCCGATaGTGGCTGGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVWSSSR*WLACSS
Trigger: GGAGGAGCAGGCCAGCCAGCATCGGCTGGAGCTCCA...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTGGAAGGTGGAGCTCCAGCCGATaGTGGCTGGCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQERFSRAGPSCTALCGRWSSSR*WLACSS
Trigger: GGAGGAGCAGGCCAGCCAGCATCGGCTGGAGCTCCA...CCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATGCAGGCCACTGCGGCTaGGCCGGCCACCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNAGHCG*AGHQQR
Trigger: CCTCTGTTGGTGGCCGGCCCAGCCGCAGTGGCCTGC...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTGGAAGGCTTCTGCTGGGCGCCTaGGCCAGAGTTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GQERFSRAGPSCTALCGRLLLGA*ARVQRG
Trigger: GCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAG...CCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCTGGTCCTGGGCTTCTTaGAGCTCCAGCCGATGCTGG +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGWSWAS*SSSRCW
Trigger: CCAGCATCGGCTGGAGCTCCAAGAAGCCCAGGACCA...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCAACTCCTGGCTGATGTaGACCAGCTGGCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACNSWLM*TSWPEA
Trigger: TGCCTCCGGCCAGCTGGTCCACATCAGCCAGGAGTT...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCAGCCTCTCCACCTGCTaGGCCTGGTTCAGCGCATCC +
Preference number: 4 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPSLSTC*AWFSAS
Trigger: GGATGCGCTGAACCAGGCCCAGCAGGTGGAGAGGCT...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCAGCCTCTCCACCTGCTaGGCCTGGTTCAGCGCATCC +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVSLSTC*AWFSAS
Trigger: GGATGCGCTGAACCAGGCCCAGCAGGTGGAGAGGCT...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCGCTTGGAGGGCCGCGTaGAGATGCCCTGTAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVAWRAA*RCPVEP
Trigger: CGGCTCTACAGGGCATCTTCACGCGGCCCTCCAAGC...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCGCGAAGAGGTCTCTGTaGGCAGGCCACTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVAKRSL*AGHCGW
Trigger: CCAGCCGCAGTGGCCTGCTCACAGAGACCTCTTCGC...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTGGAAGGCGAGGAGGGGCCCGATaGCTGTTTGTGCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GQERFSRAGPSCTALCGRRGGAR*LFVQGR
Trigger: TCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCG...CCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCGTCTCACCCAGGTACTaGACCACGCCTGGCTTCACG +
Preference number: 4 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPVSPRY*TTPGFT
Trigger: CGTGAAGCCAGGCGTGGTGCAGTACCTGGGTGAGAC...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTGGAAGGTCTCCGATCTCCTTCTaGTGGGCGCCTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GQERFSRAGPSCTALCGRSPISF*WAPGPE
Trigger: CTCTGGCCCAGGCGCCCAGCAGAAGGAGATCGGAGA...CCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCTCGATCACATGGCTGTaGTGGGCTGAGCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGSITWL*WAEHRD
Trigger: GTCCCTGTGCTCAGCCCAGCACAGCCATGTGATCGA...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACCCGAGCCCTCAGCGGTaGGCTGGCGGGTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHPSPQR*AGGSAW
Trigger: CCAAGCTGACCCGCCAGCCCACCGCTGAGGGCTCGG...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCCCGAGCCCTCAGCGGTaGGCTGGCGGGTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RELPDCAGKSKIWLCRRAPSPQR*AGGSAW
Trigger: CCAAGCTGACCCGCCAGCCCACCGCTGAGGGCTCGG...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTCCGGCCAGCTCCTCCTaGACCTCTTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVPASSS*TSCSFC
Trigger: GCAGAAGCTGCAAGAGGTCCAGGAGGAGCTGGCCGG...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCTCGCGACATTGGTCCTaGGCTTCTTGGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACSRHWS*ASWSSS
Trigger: GCTGGAGCTCCAAGAAGCCCAGGACCAATGTCGCGA...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCATCACATGGCTGTGCTaGGCTGAGCACAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGITWLC*AEHRDS
Trigger: CGAGTCCCTGTGCTCAGCCCAGCACAGCCATGTGAT...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCTCGGGCCCTGGGGAGTaGCGATTGGCTTCTAACAGC +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVSGPGE*RLASNS
Trigger: GCTGTTAGAAGCCAATCGCCACTCCCCAGGGCCCGA...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTCGCGCGTGCTCCAGCTaGGTCTGGGTCTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVRACSS*VWVSKS
Trigger: AGACTTGGAGACCCAGACCCAGCTGGAGCACGCGCG...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCAGGTCTGCCACCTCCTaGGCGTACTTCTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVRSATS*AYFSLA
Trigger: GGCCAATGAGAAGTACGCTCAGGAGGTGGCAGACCT...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCGAATTGCTGATGGTCTaGGTCCTGTCTGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGELLMV*VLSEQP
Trigger: GGGCTGCTCAGACAGGACTCAGACCATCAGCAATTC...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGAACCCAACGGACGGCCTaGCCACGGGGCTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ERPNWIASASASSRSSLGTQRTA*PRGWSA
Trigger: AGCACTCCAGCCCCGTGGGCAGGCCGTCCGTTGGGT...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCTCTTCCACCCGGAACTaGAGGTCCTCCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVSSTRN*RSSTFL
Trigger: GAGGAAGGTGGAGGACCTGCAGTTCCGGGTGGAAGA...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCTCCTTCTCCTTCCCATaGATGGCCGTCTCCAAGTCG +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGSFSFP*MAVSKS
Trigger: CGACTTGGAGACGGCCATGCATGGGAAGGAGAAGGA...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGATCCCTCCAGTGCTGCTaGAGCCCGGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ERPNWIASASASSRSSLGSLQCC*SPASSS
Trigger: GGAGGAGCTGGCCGGGCTGCAGCAGCACTGGAGGGA...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCTCCCTCCAGTGCTGCTaGAGCCCGGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RELPDCAGKSKIWLCRRASLQCC*SPASSS
Trigger: GGAGGAGCTGGCCGGGCTGCAGCAGCACTGGAGGGA...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGAAGTCCCTCTAGCTCCTaGGCGCGCAGCTGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: ERPNWIASASASSRSSLGSPSSS*ARSWAS
Trigger: CGACGCCCAGCTGCGCGCGCAGGAGCTAGAGGGACT...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCACACCACTCGCCTTTaGCAAAGTCCGTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGHTTRL*QSPSPQ
Trigger: TTGGGGAGACGGACTTTGCCAAAGGCGAGTGGTGTG...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTCCTCCTGCAGAGCTGTaGTGCCTGAGATCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVPPAEL*CLRSSG
Trigger: CCCGGAAGATCTCAGGCACCACAGCTCTGCAGGAGG...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTGCCCCATGTTTTCCGTaGTGGCCTGCTGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVAPCFP*WPAGPW
Trigger: CCAAGGTCCAGCAGGCCACCACGGAAAACATGGGGC...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCCCCAGCCGATGCTGGCTaGCCTGCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VGLSPFWSLPWEPLAVNSPADAG*PAPPAA
Trigger: AGCAGCTGGAGGAGCAGGCCAGCCAGCATCGGCTGG...GGAATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAACTCCTGGCTGATGTaGACCAGCTGGCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVNSWLM*TSWPEA
Trigger: TGCCTCCGGCCAGCTGGTCCACATCAGCCAGGAGTT...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCTTCCGCAGCAACTCCTaGCTGATGTGGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVFRSNS*LMWTSW
Trigger: CCAGCTGGTCCACATCAGCCAGGAGTTGCTGCGGAA...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACGCGAAGAGGTCTCTGTaGGCAGGCCACTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHAKRSL*AGHCGW
Trigger: CCAGCCGCAGTGGCCTGCTCACAGAGACCTCTTCGC...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCATGGCTGTGCTGGGCTaGGCACAGGGACTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RELPDCAGKSKIWLCRRAMAVLG*AQGLGS
Trigger: GCTGCCGAGTCCCTGTGCTCAGCCCAGCACAGCCAT...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTGCCTTGTCTGGCTGGTaGATACCGTTGGCAGAACCG +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVALSGW*IPLAEP
Trigger: CGGTTCTGCCAACGGTATTCACCAGCCAGACAAGGC...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCCGTGGCCGTGCCAGAATaGAGGGACAGGTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VGLSPFWSLPWEPLAVNSVAVPE*RDRFWA
Trigger: GGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCAC...GGAATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGAGTGGGGGCGTGGCCGTaGCAGAATGCAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: ERPNWIASASASSRSSLGVGAWP*QNAGTG
Trigger: ACCTGTCCCTGCATTCTGGCACGGCCACGCCCCCAC...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCTCCTTCAGGGCCTCCTaGAGAGCTGTGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVSFRAS*RAVVPE
Trigger: CTCAGGCACCACAGCTCTGCAGGAGGCCCTGAAGGA...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTGGAAGGGTACTGTCTCGCTGGTaGTCCTTGCTAGCCGACAGC +
Preference number: 4 (lower is better)
Translates to: GQERFSRAGPSCTALCGRVLSRW*SLLADS
Trigger: GCTGTCGGCTAGCAAGGAGCACCAGCGAGACAGTAC...CCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTAGTCCCTCTAGCTCCTaGGCGCGCAGCTGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: AAAACYSQERPNWIASASSPSSS*ARSWAS
Trigger: CGACGCCCAGCTGCGCGCGCAGGAGCTAGAGGGACT...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGAGCCGCTCGGCCTCCTaGCTGCTCTGGGCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKSRSAS*LLWASA
Trigger: GGCCGAAGCCCAGAGCAGGCAGGAGGCCGAGCGGCT...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCCAGCAGCCGCTCGGCCTaGGCCTTCTCCAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGLSPFWSLPWEPLAVNSSSRSA*AFSNSR
Trigger: CCTGCTATTGGAGAAGGCGCAGGCCGAGCGGCTGCT...GGAATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCTCAGAGACGGTGGTaGCGGCTCCAGACGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNSQRRW*RLQTRR
Trigger: CCTCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGA...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACGCCGGCCCACTGGCCTaGCGCAAACTGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHAGPLA*RKLCLT
Trigger: GGTGAGACACAGTTTGCGCCAGGCCAGTGGGCCGGC...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCAAGCGGAGACACCCATaGCCATGCGTTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGKRRHP*PCVWSS
Trigger: AGAAGACCAAACGCATGGCCATGGGTGTCTCCGCTT...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCTCCTGCCTGCTCTaGGCTTCGGCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAAACYSQERPNWIASASASCLL*ASALCS
Trigger: GCTGCAGAGGGCCGAAGCCCAGAGCAGGCAGGAGGC...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACACAGGTTCTGGGCCGTaGGGGATTCCACCGAGTGCG +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHTGSGP*GIPPSA
Trigger: CGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGT...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGAGCTGGACCTTGGCCTTaGGGTCTGCCACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ERPNWIASASASSRSSLGAGPWP*GLPPPE
Trigger: CTCAGGAGGTGGCAGACCTCAAGGCCAAGGTCCAGC...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCCAGGGATTTCTGGTaGTCGGAGGCCAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNSRDFW*SEASES
Trigger: GGACTCGCTGGCCTCCGATCACCAGAAATCCCTGGA...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCCAGCTCCATCGTTCTTaGCCACCGGGTCGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVQLHRS*PPGRPR
Trigger: TCTTGGACGACCCGGTGGGCAAGAACGATGGAGCTG...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCGACCTTGTGGATTGGTaGAAAGAGACCGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACDLVDW*KETELG
Trigger: CCCAAGTTCGGTCTCTTTGCACCAATCCACAAGGTC...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCTCTTCCACCCGGAACTaGAGGTCCTCCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVSSTRN*RSSTFL
Trigger: GAGGAAGGTGGAGGACCTGCAGTTCCGGGTGGAAGA...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACTCCTCCTGGACCTCTTaGAGCTTCTGCCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHSSWTS*SFCRRP
Trigger: GGGCCTGCGGCAGAAGCTGCAAGAGGTCCAGGAGGA...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGATCCTCCTGGACCTCTTaGAGCTTCTGCCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ERPNWIASASASSRSSLGSSWTS*SFCRRP
Trigger: GGGCCTGCGGCAGAAGCTGCAAGAGGTCCAGGAGGA...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTAGCTGCTCCCTCCAGTaGTGCTGCAGCCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPAIVKRGPTGSLQPLPVSCSLQ*CCSPAS
Trigger: GCTGGCCGGGCTGCAGCAGCACTGGAGGGAGCAGCT...AACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTCACTTCAGCCGCCTTTaGACCTGGCTTCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVHFSRL*TWLLRD
Trigger: GTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTG...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTACCACGCCGGCCCACTaGCCTGGCGCAAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: AAAACYSQERPNWIASASTTPAH*PGANCV
Trigger: GACACAGTTTGCGCCAGGCCAGTGGGCCGGCGTGGT...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATCCTCCTGCAGAGCTGTaGTGCCTGAGATCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNPPAEL*CLRSSG
Trigger: CCCGGAAGATCTCAGGCACCACAGCTCTGCAGGAGG...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCTCTAGAGCACTTACTTaGGCCCTGAGCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACSRALT*ALSMSI
Trigger: GATGGACATGCTCAGGGCCCAAGTAAGTGCTCTAGA...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CAA 72 bp TGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTaGGGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: WIASASASSRSS*GQERFSRAGPS
Trigger: GCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCCTCTCCTCCTCCAGCTaGTTGGACAGATCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVLSSSS*LDRSTF
Trigger: GAAGGTGGATCTGTCCAATCAGCTGGAGGAGGAGAG...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACTCCAGGGATTTCTGGTaGTCGGAGGCCAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHSRDFW*SEASES
Trigger: GGACTCGCTGGCCTCCGATCACCAGAAATCCCTGGA...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACGCTGGTGCTCCATCTTaGTGCCCTCTACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHAGAPS*CPLPGP
Trigger: AGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGC...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCGTGAGATCTGCTCTTTaGGGAACTCGATGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPVRSAL*GTRWLE
Trigger: CTCAAGCCATCGAGTTCCTCAAAGAGCAGATCTCAC...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATCCTGCAGAGCTGTGGTaGCTGAGATCTTCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNPAELW*LRSSGH
Trigger: ATGCCCGGAAGATCTCAGGCACCACAGCTCTGCAGG...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTTTTCCGTGGTGGCCTaGTGGACCTTGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNFSVVA*WTLALR
Trigger: CCTCAAGGCCAAGGTCCAGCAGGCCACCACGGAAAA...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTTCTCCGATCTCCTTCTaGTGGGCGCCTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AAAACYSQERPNWIASASSPISF*WAPGPE
Trigger: CTCTGGCCCAGGCGCCCAGCAGAAGGAGATCGGAGA...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCTCAGCCAGTGAGATCTaGTCTTTGAGGAACTCGATG +
Preference number: 4 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACSASEI*SLRNSM
Trigger: CATCGAGTTCCTCAAAGAGCAGATCTCACTGGCTGA...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCCAATAGCAGGCTCTaGTCCAGCTCCCCAATGCGC +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNSNSRL*SSSPMR
Trigger: GCGCATTGGGGAGCTGGAGCAGAGCCTGCTATTGGA...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCGGGGAGACCCTTCTTTaGAGCCACTGGTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RELPDCAGKSKIWLCRRAGETLL*SHWSRP
Trigger: TGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCCC...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGGCCGGCCCACTGGCCTaGCGCAAACTGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKAGPLA*RKLCLT
Trigger: GGTGAGACACAGTTTGCGCCAGGCCAGTGGGCCGGC...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGACCACGCCGGCCCACTaGCCTGGCGCAAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKTTPAH*PGANCV
Trigger: GACACAGTTTGCGCCAGGCCAGTGGGCCGGCGTGGT...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCATTCGGATGACCTTGTaGATTGGTGCAAAGAGACCG +
Preference number: 4 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGIRMTL*IGAKRP
Trigger: CGGTCTCTTTGCACCAATCCACAAGGTCATCCGAAT...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCCCTCCTCCAGCTGATTaGACAGATCCACCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPPPPAD*TDPPSL
Trigger: AAGAGAAGGTGGATCTGTCCAATCAGCTGGAGGAGG...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATGAGCGTACTTCTCATTaGCCGCCCGGAGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNERTSH*PPGACP
Trigger: TGGACAAGCTCCGGGCGGCCAATGAGAAGTACGCTC...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACGCCCCATGTTTTCCGTaGTGGCCTGCTGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHAPCFP*WPAGPW
Trigger: CCAAGGTCCAGCAGGCCACCACGGAAAACATGGGGC...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGATGGTCCTGGGCTTCTTaGAGCTCCAGCCGATGCTGG +
Preference number: 4 (lower is better)
Translates to: ERPNWIASASASSRSSLGWSWAS*SSSRCW
Trigger: CCAGCATCGGCTGGAGCTCCAAGAAGCCCAGGACCA...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATAGGGACTCGGCAGCCTaGAGTCTATTCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNRDSAA*SLFSAT
Trigger: GGTGGCTGAGAATAGACTCCAGGCTGCCGAGTCCCT...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTCTGAGCATGTCCATCTaGGATGTCAAGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVLSMSI*DVKAVT
Trigger: GGTGACAGCCTTGACATCCCAGATGGACATGCTCAG...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCTCGGGCCCTGGGGAGTaGCGATTGGCTTCTAACAGC +
Preference number: 4 (lower is better)
Translates to: RELPDCAGKSKIWLCRRASGPGE*RLASNS
Trigger: GCTGTTAGAAGCCAATCGCCACTCCCCAGGGCCCGA...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCATTGCCCGTCTTCACTaGGCTGTTAAGAACACTCTC +
Preference number: 4 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVIARLH*AVKNTL
Trigger: GAGAGTGTTCTTAACAGCTCAGTGAAGACGGGCAAT...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCATACTGCTCATGCTGTaGCTTCAGCAGGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVILLML*LQQGDL
Trigger: GAGATCGCCCTGCTGAAGGCACAGCATGAGCAGTAT...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGACAAGAGAGGTTCTCCAGGGCTGGGCCCAGCTGTACCGCGCTCTGTGGAAGGCTTCTCCTCGGCTTCTaGAACATACTGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: GQERFSRAGPSCTALCGRLLLGF*NILLML
Trigger: CAGCATGAGCAGTATGTTGCAGAAGCCGAGGAGAAG...CCTTCCACAGAGCGCGGTACAGCTGGGCCCAGCCCTGGAGAACCTCTCTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACGTACTGTCTCGCTGGTaGTCCTTGCTAGCCGACAGC +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHVLSRW*SLLADS
Trigger: GCTGTCGGCTAGCAAGGAGCACCAGCGAGACAGTAC...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTACCAGCCTCTCCACCTaGTGGGCCTGGTTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QPAIVKRGPTGSLQPLPVTSLST*WAWFSA
Trigger: TGCGCTGAACCAGGCCCAGCAGGTGGAGAGGCTGGT...AACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATCACTTCAGCCGCCTTTaGACCTGGCTTCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNHFSRL*TWLLRD
Trigger: GTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTG...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATCACTGTCGGAGAGGTTaGAACCAGACTCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNHCRRG*NQTHCP
Trigger: CGGGCAATGAGTCTGGTTCCAACCTCTCCGACAGTG...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGGAGCTGCTGGGGCTGTaGGTCAAAGCGGAGACACCC +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKELLGL*VKAETP
Trigger: GGGTGTCTCCGCTTTGACCCACAGCCCCAGCAGCTC...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGGCAGGCCACTGCGGCTaGGCCGGCCACCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLAGHCG*AGHQQR
Trigger: CCTCTGTTGGTGGCCGGCCCAGCCGCAGTGGCCTGC...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATCTGGGGAGTGGCGATTaGCTTCTAACAGCAACACCC +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNLGSGD*LLTATP
Trigger: GGGTGTTGCTGTTAGAAGCCAATCGCCACTCCCCAG...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACGAATTGCTGATGGTCTaGGTCCTGTCTGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHELLMV*VLSEQP
Trigger: GGGCTGCTCAGACAGGACTCAGACCATCAGCAATTC...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTCCTGCAGAGCTGTGGTaGCTGAGATCTTCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: AAAACYSQERPNWIASASPAELW*LRSSGH
Trigger: ATGCCCGGAAGATCTCAGGCACCACAGCTCTGCAGG...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTTCCTTCAGGGCCTCCTaGAGAGCTGTGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QPAIVKRGPTGSLQPLPVSFRAS*RAVVPE
Trigger: CTCAGGCACCACAGCTCTGCAGGAGGCCCTGAAGGA...AACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTTTTTCCGTGGTGGCCTaGTGGACCTTGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: AAAACYSQERPNWIASASFSVVA*WTLALR
Trigger: CCTCAAGGCCAAGGTCCAGCAGGCCACCACGGAAAA...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATCCTAACTCCAGCTGGTaGTCCATCTTGATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNPNSSW*SILMPS
Trigger: AGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGG...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCTCCTTCTCCTTCCCATaGATGGCCGTCTCCAAGTCG +
Preference number: 4 (lower is better)
Translates to: RELPDCAGKSKIWLCRRASFSFP*MAVSKS
Trigger: CGACTTGGAGACGGCCATGCATGGGAAGGAGAAGGA...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGGCTCGGCCTCCTGCCTaGTCTGGGCTTCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLARPPA*SGLRPS
Trigger: AGAGGGCCGAAGCCCAGAGCAGGCAGGAGGCCGAGC...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCGATGACCTTGTGGATTaGTGCAAAGAGACCGAACTT +
Preference number: 4 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPDDLVD*CKETEL
Trigger: AAGTTCGGTCTCTTTGCACCAATCCACAAGGTCATC...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGGCCTCCTGCCTGCTCTaGGCTTCGGCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRASCLL*ASALCS
Trigger: GCTGCAGAGGGCCGAAGCCCAGAGCAGGCAGGAGGC...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCTGAAGGTGGCGCTGCTGGGAAGCCTGGTAGGGCTTCTGGTGTGAGTAGGGTCTCTAGAGCACTTACTTaGGCCCTGAGCATGTCCATC +
Preference number: 4 (lower is better)
Translates to: PEGGAAGKPGRASGVSRVSRALT*ALSMSI
Trigger: GATGGACATGCTCAGGGCCCAAGTAAGTGCTCTAGA...GACCCTACTCACACCAGAAGCCCTACCAGGCTTCCCAGCAGCGCCACCTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATCCAAGTCTCCTTTGGTaGTGGATTCTTCTTCCACCC +
Preference number: 4 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNPSLLW*WILLPP
Trigger: GGGTGGAAGAAGAATCCATCACCAAAGGAGACTTGG...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGGGTCTGAGTCCTGTCTaGGCAGCCCCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLGLSPV*AAPQGL
Trigger: GAGGCCCTGAGGGGCTGCTCAGACAGGACTCAGACC...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACCCTAACTCCAGCTGGTaGTCCATCTTGATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHPNSSW*SILMPS
Trigger: AGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGG...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGAGCCGCCTTTGGACCTaGCTTCTCAGAGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKSRLWT*LLRDGG
Trigger: ACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCT...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTCACTGTCGGAGAGGTTaGAACCAGACTCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: AAAACYSQERPNWIASASHCRRG*NQTHCP
Trigger: CGGGCAATGAGTCTGGTTCCAACCTCTCCGACAGTG...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGGAGCGTACTTCTCATTaGCCGCCCGGAGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKERTSH*PPGACP
Trigger: TGGACAAGCTCCGGGCGGCCAATGAGAAGTACGCTC...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCCTCTCCAAGTCGTGCTTaGCCTGCAGGTTACCTAACT +
Preference number: 4 (lower is better)
Translates to: VGLSPFWSLPWEPLAVNSSPSRA*PAGYLT
Trigger: AGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGA...GGAATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGAGCTCCAGCCGATGCTaGCTGGCCTGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLSSSRC*LACSSS
Trigger: GCTGGAGGAGCAGGCCAGCCAGCATCGGCTGGAGCT...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTATCACATGGCTGTGCTaGGCTGAGCACAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: QPAIVKRGPTGSLQPLPVITWLC*AEHRDS
Trigger: CGAGTCCCTGTGCTCAGCCCAGCACAGCCATGTGAT...AACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGTCCACCTGCTGGGCCTaGTTCAGCGCATCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRSTCWA*FSASRR
Trigger: CCTGCGGGATGCGCTGAACCAGGCCCAGCAGGTGGA...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CAA 72 bp GCCATCAAAGGCCAGTGCTTATGGGGAAATGGCTTCTaGCACACCTACCAGGTGCAAGCCCACTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AIKGQCLWGNGF*HTYQVQAHSRV
Trigger: CACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGCAAGAAGCCATTTCCCCATAAGCACTGGCCTTTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CACGGCAGTGAGGACAATATTGTTACAAACACAGTCACATCTCCAAGGGGACAGTGCGGGTGGCGGGCCTaGCTGGAGGAGACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: HGSEDNIVTNTVTSPRGQCGWRA*LEETVL
Trigger: CAACACTGTCTCCTCCAGTCAGGCCCGCCACCCGCA...CTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGGCTGGACCTTGGCCTTaGGGTCTGCCACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRAGPWP*GLPPPE
Trigger: CTCAGGAGGTGGCAGACCTCAAGGCCAAGGTCCAGC...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGAATTTCCAGTTGTCCATaGGCCCCATGTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ERPNWIASASASSRSSLGISSCP*APCFPW
Trigger: CCACGGAAAACATGGGGCTCATGGACAACTGGAAAT...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACGACCTTGTGGATTGGTaGAAAGAGACCGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: WCLVALTQATWAILRIYHDLVDW*KETELG
Trigger: CCCAAGTTCGGTCTCTTTGCACCAATCCACAAGGTC...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGACCAGCCTCTCCACCTaGTGGGCCTGGTTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRTSLST*WAWFSA
Trigger: TGCGCTGAACCAGGCCCAGCAGGTGGAGAGGCTGGT...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCCCTCAGCGGTGGGCTaGCGGGTCAGCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFPSAVG*RVSLEG
Trigger: GCCCTCCAAGCTGACCCGCCAGCCCACCGCTGAGGG...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGCACACCACTCGCCTTTaGCAAAGTCCGTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKHTTRL*QSPSPQ
Trigger: TTGGGGAGACGGACTTTGCCAAAGGCGAGTGGTGTG...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CACGGCAGTGAGGACAATATTGTTACAAACACAGTCACATCTCCAAGGGGACAGAGCTCCAGCCGATGCTaGCTGGCCTGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HGSEDNIVTNTVTSPRGQSSSRC*LACSSS
Trigger: GCTGGAGGAGCAGGCCAGCCAGCATCGGCTGGAGCT...CTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CACGGCAGTGAGGACAATATTGTTACAAACACAGTCACATCTCCAAGGGGACAGGTGGCCGTGCCAGAATaGAGGGACAGGTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HGSEDNIVTNTVTSPRGQVAVPE*RDRFWA
Trigger: GGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCAC...CTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTCCTCCTCCAGCTGATTaGACAGATCCACCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: AAAACYSQERPNWIASASPPPAD*TDPPSL
Trigger: AAGAGAAGGTGGATCTGTCCAATCAGCTGGAGGAGG...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGCTGAGCATGTCCATCTaGGATGTCAAGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKLSMSI*DVKAVT
Trigger: GGTGACAGCCTTGACATCCCAGATGGACATGCTCAG...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTATTTCCAGTTGTCCATaGGCCCCATGTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: QPAIVKRGPTGSLQPLPVISSCP*APCFPW
Trigger: CCACGGAAAACATGGGGCTCATGGACAACTGGAAAT...AACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGTCGATCACATGGCTGTaGTGGGCTGAGCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLSITWL*WAEHRD
Trigger: GTCCCTGTGCTCAGCCCAGCACAGCCATGTGATCGA...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGCCATGTTTTCCGTGGTaGCCTGCTGGACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRPCFPW*PAGPWP
Trigger: AGGCCAAGGTCCAGCAGGCCACCACGGAAAACATGG...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCTTCTGCTGGGCGCCTaGGCCAGAGTTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFLLLGA*ARVQRG
Trigger: GCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAG...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGTCTCCAAGTCGTGCTTaGCCTGCAGGTTACCTAACT +
Preference number: 4 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKSPSRA*PAGYLT
Trigger: AGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGA...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGTTCCGCAGCAACTCCTaGCTGATGTGGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRFRSNS*LMWTSW
Trigger: CCAGCTGGTCCACATCAGCCAGGAGTTGCTGCGGAA...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCACAGGTTCTGGGCCGTaGGGGATTCCACCGAGTGCG +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFTGSGP*GIPPSA
Trigger: CGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGT...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGCTCTCCTCCTCCAGCTaGTTGGACAGATCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLLSSSS*LDRSTF
Trigger: GAAGGTGGATCTGTCCAATCAGCTGGAGGAGGAGAG...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CACGGCAGTGAGGACAATATTGTTACAAACACAGTCACATCTCCAAGGGGACAGCAGCTCCATCGTTCTTaGCCACCGGGTCGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: HGSEDNIVTNTVTSPRGQQLHRS*PPGRPR
Trigger: TCTTGGACGACCCGGTGGGCAAGAACGATGGAGCTG...CTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CACGGCAGTGAGGACAATATTGTTACAAACACAGTCACATCTCCAAGGGGACAGCCATGTTTTCCGTGGTaGCCTGCTGGACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HGSEDNIVTNTVTSPRGQPCFPW*PAGPWP
Trigger: AGGCCAAGGTCCAGCAGGCCACCACGGAAAACATGG...CTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGGGCCAGAGTTCAGCGTaGCCTTCAGGTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLGQSSA*PSGPPG
Trigger: CCCTGGAGGACCTGAAGGCCACGCTGAACTCTGGCC...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGCCGGCCAGCTCCTCCTaGACCTCTTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLPASSS*TSCSFC
Trigger: GCAGAAGCTGCAAGAGGTCCAGGAGGAGCTGGCCGG...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGCTGGGGAGTGGCGATTaGCTTCTAACAGCAACACCC +
Preference number: 4 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLLGSGD*LLTATP
Trigger: GGGTGTTGCTGTTAGAAGCCAATCGCCACTCCCCAG...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCAGGAACTCGATGGCTTaGGCCTGGCCACGGTACTCC +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFRNSMA*AWPRYS
Trigger: GGAGTACCGTGGCCAGGCTCAAGCCATCGAGTTCCT...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CACGGCAGTGAGGACAATATTGTTACAAACACAGTCACATCTCCAAGGGGACAGCACTTACTTGGGCCCTaGGCATGTCCATCTGGGATG +
Preference number: 4 (lower is better)
Translates to: HGSEDNIVTNTVTSPRGQHLLGP*ACPSGM
Trigger: CATCCCAGATGGACATGCTCAGGGCCCAAGTAAGTG...CTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGATACTGCTCATGCTGTaGCTTCAGCAGGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRILLML*LQQGDL
Trigger: GAGATCGCCCTGCTGAAGGCACAGCATGAGCAGTAT...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGGGGGAGACCCTTCTTTaGAGCCACTGGTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLGETLL*SHWSRP
Trigger: TGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCCC...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CACGGCAGTGAGGACAATATTGTTACAAACACAGTCACATCTCCAAGGGGACAGAACTTGGGTGGGCACTaGAAGTACCTGGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HGSEDNIVTNTVTSPRGQNLGGH*KYLVPA
Trigger: GGCAGGAACCAGGTACTTCCAGTGCCCACCCAAGTT...CTGTCCCCTTGGAGATGTGACTGTGTTTGTAACAATATTGTCCTCACTGCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTGATGACCTTGTGGATTaGTGCAAAGAGACCGAACTT +
Preference number: 4 (lower is better)
Translates to: QPAIVKRGPTGSLQPLPVDDLVD*CKETEL
Trigger: AAGTTCGGTCTCTTTGCACCAATCCACAAGGTCATC...AACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCAGGTCTGCCACCTCCTaGGCGTACTTCTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFRSATS*AYFSLA
Trigger: GGCCAATGAGAAGTACGCTCAGGAGGTGGCAGACCT...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCGCCTTGTCTGGCTGGTaGATACCGTTGGCAGAACCG +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFALSGW*IPLAEP
Trigger: CGGTTCTGCCAACGGTATTCACCAGCCAGACAAGGC...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGTCGCGACATTGGTCCTaGGCTTCTTGGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLSRHWS*ASWSSS
Trigger: GCTGGAGCTCCAAGAAGCCCAGGACCAATGTCGCGA...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCAGGGACTCGGCAGCCTaGAGTCTATTCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFRDSAA*SLFSAT
Trigger: GGTGGCTGAGAATAGACTCCAGGCTGCCGAGTCCCT...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
3UTR CAA 72 bp ACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTaGATTCCTCTCACCCAGCAAAACGCTGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: TWQGFPERKGTS*IPLTQQNAVGM
Trigger: CATTCCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGATTCGGATGACCTTGTaGATTGGTGCAAAGAGACCG +
Preference number: 4 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRIRMTL*IGAKRP
Trigger: CGGTCTCTTTGCACCAATCCACAAGGTCATCCGAAT...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCAAGCGGAGACACCCATaGCCATGCGTTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFKRRHP*PCVWSS
Trigger: AGAAGACCAAACGCATGGCCATGGGTGTCTCCGCTT...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGCCAAGTCTCCTTTGGTaGTGGATTCTTCTTCCACCC +
Preference number: 4 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLPSLLW*WILLPP
Trigger: GGGTGGAAGAAGAATCCATCACCAAAGGAGACTTGG...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR TCA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCGTGAGATCTGCTCTTTaGGGAACTCGATGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PQSQALLSEHGLATLPQFVRSAL*GTRWLE
Trigger: CTCAAGCCATCGAGTTCCTCAAAGAGCAGATCTCAC...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGCTTCTCCTCGGCTTCTaGAACATACTGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLLLLGF*NILLML
Trigger: CAGCATGAGCAGTATGTTGCAGAAGCCGAGGAGAAG...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR GCA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGTCAGCCAGTGAGATCTaGTCTTTGAGGAACTCGATG +
Preference number: 4 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLSASEI*SLRNSM
Trigger: CATCGAGTTCCTCAAAGAGCAGATCTCACTGGCTGA...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp CCGAGCCCTCAGCGGTGGGCTGGCGGGTCAGCTTGGAGGGCCGCGTaGAGATGCCCTGTAGAGCCGGGCACTCGAAGTAGCGCACGCCAC +
Preference number: 5 (lower is better)
Translates to: PSPQRWAGGSAWRAA*RCPVEPGTRSSARH
Trigger: GTGGCGTGCGCTACTTCGAGTGCCCGGCTCTACAGGGCATCTTCACGCGGCCCTCCAAGCTGACCCGCCAGCCCACCGCTGAGGGCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp CCCTCTAGCTCCTGCGCGCGCAGCTGGGCGTCGCGACATTGGTCCTaGGCTTCTTGGAGCTCCAGCCGATGCTGGCTGGCCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSSSCARSWASRHWS*ASWSSSRCWLACSS
Trigger: GGAGGAGCAGGCCAGCCAGCATCGGCTGGAGCTCCAAGAAGCCCAGGACCAATGTCGCGACGCCCAGCTGCGCGCGCAGGAGCTAGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp GTGGGGGCGTGGCCGTGCCAGAATGCAGGGACAGGTTCTGGGCCGTaGGGGATTCCACCGAGTGCGTATCACTGCCCGAGCCCTCAGCGG +
Preference number: 5 (lower is better)
Translates to: VGAWPCQNAGTGSGP*GIPPSAYHCPSPQR
Trigger: CCGCTGAGGGCTCGGGCAGTGATACGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCACGCCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp GACAGCAGCCGCTCTCGCAGCCGCAAAGTCTCAGCGGCCTCTGGGTaGTCTGCGGGTGGCGGGCCTGACTGGAGGAGACAGTGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: DSSRSRSRKVSAASG*SAGGGPDWRRQCCS
Trigger: GCTGCAACACTGTCTCCTCCAGTCAGGCCCGCCACCCGCAGACCACCCAGAGGCCGCTGAGACTTTGCGGCTGCGAGAGCGGCTGCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp TCCAGTCCCTCTAGCTCCTGCGCGCGCAGCTGGGCGTCGCGACATTaGTCCTGGGCTTCTTGGAGCTCCAGCCGATGCTGGCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSPSSSCARSWASRH*SWASWSSSRCWLAC
Trigger: GCAGGCCAGCCAGCATCGGCTGGAGCTCCAAGAAGCCCAGGACCAATGTCGCGACGCCCAGCTGCGCGCGCAGGAGCTAGAGGGACTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp ACGGTGGTGGCGGCTCCAGACGAGGAGGGGCCCGATGCCTGTTTGTaGAGGGGAGACCCTTCTTTGGAGCCACTGGTCGAGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: TVVAAPDEEGPDACL*RGDPSLEPLVEATT
Trigger: CGTGGTGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCGTCTGGAGCCGCCACCACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp CCAGAATGCAGGGACAGGTTCTGGGCCGTGAGGGATTCCACCGAGTaGGTATCACTGCCCGAGCCCTCAGCGGTGGGCTGGCGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PECRDRFWAVRDSTE*VSLPEPSAVGWRVS
Trigger: GCTGACCCGCCAGCCCACCGCTGAGGGCTCGGGCAGTGATACGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGTCCCTGCATTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp TCTCTGAGCAGCCGCTCGGCCTGCGCCTTCTCCAATAGCAGGCTCTaGTCCAGCTCCCCAATGCGCGCGTGCTCCAGCTGGGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SLSSRSACAFSNSRL*SSSPMRACSSWVWV
Trigger: GACCCAGACCCAGCTGGAGCACGCGCGCATTGGGGAGCTGGAGCAGAGCCTGCTATTGGAGAAGGCGCAGGCCGAGCGGCTGCTCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS CCA 90 bp GATTCCACCGAGTGCGTATCACTGCCCGAGCCCTCAGCGGTGGGCTaGCGGGTCAGCTTGGAGGGCCGCGTGAAGATGCCCTGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: DSTECVSLPEPSAVG*RVSLEGRVKMPCRA
Trigger: GGCTCTACAGGGCATCTTCACGCGGCCCTCCAAGCTGACCCGCCAGCCCACCGCTGAGGGCTCGGGCAGTGATACGCACTCGGTGGAATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp CCTGTGAGTGGGGGCGTGGCCGTGCCAGAATGCAGGGACAGGTTCTaGGCCGTGAGGGATTCCACCGAGTGCGTATCACTGCCCGAGCCC +
Preference number: 5 (lower is better)
Translates to: PVSGGVAVPECRDRF*AVRDSTECVSLPEP
Trigger: GGGCTCGGGCAGTGATACGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCACGCCCCCACTCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp CCGCAAAGTCTCAGCGGCCTCTGGGTGGTCTGCGGGTGGCGGGCCTaGCTGGAGGAGACAGTGTTGCAGCTCTTCGATCTCACCACGCCG +
Preference number: 5 (lower is better)
Translates to: PQSLSGLWVVCGWRA*LEETVLQLFDLTTP
Trigger: CGGCGTGGTGAGATCGAAGAGCTGCAACACTGTCTCCTCCAGTCAGGCCCGCCACCCGCAGACCACCCAGAGGCCGCTGAGACTTTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp AGGGGGATGACTCGGCCTGTGAGTGGGGGCGTGGCCGTGCCAGAATaGAGGGACAGGTTCTGGGCCGTGAGGGATTCCACCGAGTGCGTA +
Preference number: 5 (lower is better)
Translates to: RGMTRPVSGGVAVPE*RDRFWAVRDSTECV
Trigger: TACGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCACGCCCCCACTCACAGGCCGAGTCATCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp CACCCACTTCAGCCGCCTTTGGACCTGGCTTCTCAGAGACGGTGGTaGCGGCTCCAGACGAGGAGGGGCCCGATGCCTGTTTGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: HPLQPPLDLASQRRW*RLQTRRGPMPVCAG
Trigger: CCCTGCACAAACAGGCATCGGGCCCCTCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GAGCGTGAGCGCCACCTTCTGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCAGCTGGTGCTCCATCTaGATGCCCTCTACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: ERERHLLVPSGAHTGHLGSWCSI*MPSTRA
Trigger: GGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCT...GCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCAGAAGGTGGCGCTCACGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp GGGAGACCCTTCTTTGGAGCCACTGGTCGAGGCCACCACGGAAGATaGAGCAGACCCAACGGACGGCCTGCCCACGGGGCTGGAGTGCTT +
Preference number: 5 (lower is better)
Translates to: GRPFFGATGRGHHGR*SRPNGRPAHGAGVL
Trigger: AAGCACTCCAGCCCCGTGGGCAGGCCGTCCGTTGGGTCTGCTTCATCTTCCGTGGTGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp GCTGTTAAGAACACTCTCCCGCAGGGGGATGACTCGGCCTGTGAGTaGGGGCGTGGCCGTGCCAGAATGCAGGGACAGGTTCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: AVKNTLPQGDDSACE*GRGRARMQGQVLGR
Trigger: ACGGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCACGCCCCCACTCACAGGCCGAGTCATCCCCCTGCGGGAGAGTGTTCTTAACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp AAAGTCTCAGCGGCCTCTGGGTGGTCTGCGGGTGGCGGGCCTGACTaGAGGAGACAGTGTTGCAGCTCTTCGATCTCACCACGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: KVSAASGWSAGGGPD*RRQCCSSSISPRRR
Trigger: CCTGCGGCGTGGTGAGATCGAAGAGCTGCAACACTGTCTCCTCCAGTCAGGCCCGCCACCCGCAGACCACCCAGAGGCCGCTGAGACTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTGGTCCTGGGCTTCTaGGAGCTCCAGCCGATGCTG +
Preference number: 5 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPLVLGF*ELQPML
Trigger: CAGCATCGGCTGGAGCTCCAAGAAGCCCAGGACCAA...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp CTTCTCAGAGACGGTGGTGGCGGCTCCAGACGAGGAGGGGCCCGATaGCTGTTTGTGCAGGGGAGACCCTTCTTTGGAGCCACTGGTCGA +
Preference number: 5 (lower is better)
Translates to: LLRDGGGGSRRGGAR*LFVQGRPFFGATGR
Trigger: TCGACCAGTGGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp CCACCTGCTGGGCCTGGTTCAGCGCATCCCGCAGGGCGTCTTCCGTaGTCACCAACTGATGCTGCAGTTTCAGCAGCTCGGGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PPAGPGSAHPAGRLP*SPTDAAVSAARVVK
Trigger: CTTCACCACCCGAGCTGCTGAAACTGCAGCATCAGTTGGTGAGCACGGAAGACGCCCTGCGGGATGCGCTGAACCAGGCCCAGCAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp CATCACCCACTTCAGCCGCCTTTGGACCTGGCTTCTCAGAGACGGTaGTGGCGGCTCCAGACGAGGAGGGGCCCGATGCCTGTTTGTGCA +
Preference number: 5 (lower is better)
Translates to: HHPLQPPLDLASQRR*WRLQTRRGPMPVCA
Trigger: TGCACAAACAGGCATCGGGCCCCTCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGGGTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp ACTCTCCGATCTCCTTCTGCTGGGCGCCTGGGCCAGAGTTCAGCGTaGCCTTCAGGTCCTCCAGGGATTTCTGGTGATCGGAGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: TLRSPSAGRLGQSSA*PSGPPGISGDRRPA
Trigger: CGCTGGCCTCCGATCACCAGAAATCCCTGGAGGACCTGAAGGCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAGGAGATCGGAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCGGCTGGCGGGTCAGCTaGGAGGGCCGCGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: RELPDCAGKSKIWLCRRAGWRVS*EGRVKM
Trigger: CATCTTCACGCGGCCCTCCAAGCTGACCCGCCAGCC...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATTCCGTGGCCTGCTGGACCTaGGCCTTGAGGTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: VGLSPFWSLPWEPLAVNSVACWT*ALRSAT
Trigger: GGTGGCAGACCTCAAGGCCAAGGTCCAGCAGGCCAC...GGAATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp TCTGGGTGGTCTGCGGGTGGCGGGCCTGACTGGAGGAGACAGTGTTaGAGCTCTTCGATCTCACCACGCCGCAGGCTCAACTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SGWSAGGGPDWRRQC*SSSISPRRRLNSSS
Trigger: GGAAGAAGAGTTGAGCCTGCGGCGTGGTGAGATCGAAGAGCTGCAACACTGTCTCCTCCAGTCAGGCCCGCCACCCGCAGACCACCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp AAAGTCTCCCAGGAAGTCATCACCCACTTCAGCCGCCTTTGGACCTaGCTTCTCAGAGACGGTGGTGGCGGCTCCAGACGAGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: KVSQEVITHFSRLWT*LLRDGGGGSRRGGA
Trigger: GGCCCCTCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGGGTGATGACTTCCTGGGAGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp ACCACACCGGTCTTCGTCCCACCAACCAGCACACGGTCTCCCAGGTaGAGGTCCTTGTCACCGCGCTTCACAGAACCACTGTCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TTPVFVPPTSTRSPR*RSLSPRFTEPLSER
Trigger: CCTCTCCGACAGTGGTTCTGTGAAGCGCGGTGACAAGGACCTCCACCTGGGAGACCGTGTGCTGGTTGGTGGGACGAAGACCGGTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp TTGATGCCCTCTACCAGGGCCTTCAACTCTCCGATCTCCTTCTGCTaGGCGCCTGGGCCAGAGTTCAGCGTGGCCTTCAGGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LMPSTRAFNSPISFC*APGPEFSVAFRSSR
Trigger: CCTGGAGGACCTGAAGGCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAGGAGATCGGAGAGTTGAAGGCCCTGGTAGAGGGCATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCACCTCTTTGTCCCTCTaGTTCAGCTTGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACTSLSL*FSLSCR
Trigger: CCTGCAGGACAAGCTGAACAAGAGGGACAAAGAGGT...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp TCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTCCTGGGGAGTGGCGATaGGCTTCTAACAGCAACACC +
Preference number: 5 (lower is better)
Translates to: SRVGLSPFWSLPWEPLAVPGEWR*ASNSNT
Trigger: GGTGTTGCTGTTAGAAGCCAATCGCCACTCCCCAGG...AACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp CCCTCAGCTCGTTCAGACTCCTCTCTTTCCGCAGCAACTCCTGGCTaGTGTGGACCAGCTGGCCGGAGGCATCGTGGGTCTTCCGAGACA +
Preference number: 5 (lower is better)
Translates to: PSARSDSSLSAATPG*CGPAGRRHRGSSET
Trigger: TGTCTCGGAAGACCCACGATGCCTCCGGCCAGCTGGTCCACATCAGCCAGGAGTTGCTGCGGAAAGAGAGGAGTCTGAACGAGCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp GCCTGGTTCAGCGCATCCCGCAGGGCGTCTTCCGTGCTCACCAACTaGTGCTGCAGTTTCAGCAGCTCGGGTGGTGAAGCTGGGTCAATG +
Preference number: 5 (lower is better)
Translates to: AWFSASRRASSVLTN*CCSFSSSGGEAGSM
Trigger: CATTGACCCAGCTTCACCACCCGAGCTGCTGAAACTGCAGCATCAGTTGGTGAGCACGGAAGACGCCCTGCGGGATGCGCTGAACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp ATCTTGATGCCCTCTACCAGGGCCTTCAACTCTCCGATCTCCTTCTaGTGGGCGCCTGGGCCAGAGTTCAGCGTGGCCTTCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: ILMPSTRAFNSPISF*WAPGPEFSVAFRSS
Trigger: GGAGGACCTGAAGGCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAGGAGATCGGAGAGTTGAAGGCCCTGGTAGAGGGCATCAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp ACGAGGAGGGGCCCGATGCCTGTTTGTGCAGGGGAGACCCTTCTTTaGAGCCACTGGTCGAGGCCACCACGGAAGATGAAGCAGACCCAA +
Preference number: 5 (lower is better)
Translates to: TRRGPMPVCAGETLL*SHWSRPPRKMKQTQ
Trigger: TTGGGTCTGCTTCATCTTCCGTGGTGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp CTCTACCAGGGCCTTCAACTCTCCGATCTCCTTCTGCTGGGCGCCTaGGCCAGAGTTCAGCGTGGCCTTCAGGTCCTCCAGGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: LYQGLQLSDLLLLGA*ARVQRGLQVLQGFL
Trigger: CAGAAATCCCTGGAGGACCTGAAGGCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAGGAGATCGGAGAGTTGAAGGCCCTGGTAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp TCGATCACATGGCTGTGCTGGGCTGAGCACAGGGACTCGGCAGCCTaGAGTCTATTCTCAGCCACCAGAAGCTTTTCCCGCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: SITWLCWAEHRDSAA*SLFSATRSFSRSRS
Trigger: CGAGCGGCTGCGGGAAAAGCTTCTGGTGGCTGAGAATAGACTCCAGGCTGCCGAGTCCCTGTGCTCAGCCCAGCACAGCCATGTGATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp AGCTCGTTCAGACTCCTCTCTTTCCGCAGCAACTCCTGGCTGATGTaGACCAGCTGGCCGGAGGCATCGTGGGTCTTCCGAGACACAGCC +
Preference number: 5 (lower is better)
Translates to: SSFRLLSFRSNSWLM*TSWPEASWVFRDTA
Trigger: GGCTGTGTCTCGGAAGACCCACGATGCCTCCGGCCAGCTGGTCCACATCAGCCAGGAGTTGCTGCGGAAAGAGAGGAGTCTGAACGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATACAGCTCCATCGTTCTaGCCCACCGGGTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNTAPSF*PTGSSK
Trigger: CTTGGACGACCCGGTGGGCAAGAACGATGGAGCTGT...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATGAGGAACTCGATGGCTaGAGCCTGGCCACGGTACTC +
Preference number: 5 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNEELDG*SLATVL
Trigger: GAGTACCGTGGCCAGGCTCAAGCCATCGAGTTCCTC...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GAAGGGAGGCGGGGAAGTCCCCAGGTGTCCAGACAAGCCGCAGCAGCAGCCTGCAAGGCTGTCACCTCTTaGTCCCTCTTGTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: EGRRGSPQVSRQAAAAACKAVTS*SLLFSL
Trigger: CAAGCTGAACAAGAGGGACAAAGAGGTGACAGCCTT...GCAGGCTGCTGCTGCGGCTTGTCTGGACACCTGGGGACTTCCCCGCCTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp ACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCCCATCCGCCATTCAGCTTaGTGTACTTCACGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: TPTRCKPTPGWGSAPSGPIRHSA*CTSRLR
Trigger: CCTGAGCCGTGAAGTACACAAAGCTGAATGGCGGAT...GGGACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp GGGCCTTGTCTGGCTGGTGAATACCGTTGGCAGAACCGGAATTGCTaGTGGTCTGAGTCCTGTCTGAGCAGCCCCTCAGGGCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: GPCLAGEYRWQNRNC*WSESCLSSPSGPPP
Trigger: TGGTGGAGGCCCTGAGGGGCTGCTCAGACAGGACTCAGACCATCAGCAATTCCGGTTCTGCCAACGGTATTCACCAGCCAGACAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp CACCACAAAGTCTCCCAGGAAGTCATCACCCACTTCAGCCGCCTTTaGACCTGGCTTCTCAGAGACGGTGGTGGCGGCTCCAGACGAGGA +
Preference number: 5 (lower is better)
Translates to: HHKVSQEVITHFSRL*TWLLRDGGGGSRRG
Trigger: TCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGGGTGATGACTTCCTGGGAGACTTTGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp AACACCCTCAGCTCGTTCAGACTCCTCTCTTTCCGCAGCAACTCCTaGCTGATGTGGACCAGCTGGCCGGAGGCATCGTGGGTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: NTLSSFRLLSFRSNS*LMWTSWPEASWVFR
Trigger: TCGGAAGACCCACGATGCCTCCGGCCAGCTGGTCCACATCAGCCAGGAGTTGCTGCGGAAAGAGAGGAGTCTGAACGAGCTGAGGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp AGGGTGGGGCTCAGCCCCTTCTGGTCCCTTCCGTGGGAGCCTTTGGCTGTTAATCCACTTCAGCCGCCTTaGGACCTGGCTTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: RVGLSPFWSLPWEPLAVNPLQPP*DLASQR
Trigger: TCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGG...ATTAACAGCCAAAGGCTCCCACGGAAGGGACCAGAAGGGGCTGAGCCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp GGGCCAGAGTTCAGCGTGGCCTTCAGGTCCTCCAGGGATTTCTGGTaGTCGGAGGCCAGCGAGTCCAGCTTGGATTTCCAGTTGTCCATG +
Preference number: 5 (lower is better)
Translates to: GPEFSVAFRSSRDFW*SEASESSLDFQLSM
Trigger: CATGGACAACTGGAAATCCAAGCTGGACTCGCTGGCCTCCGATCACCAGAAATCCCTGGAGGACCTGAAGGCCACGCTGAACTCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp GCCGTCTCCAAGTCGTGCTTGGCCTGCAGGTTACCTAACTCCAGCTaGTGCTCCATCTTGATGCCCTCTACCAGGGCCTTCAACTCTCCG +
Preference number: 5 (lower is better)
Translates to: AVSKSCLACRLPNSS*CSILMPSTRAFNSP
Trigger: CGGAGAGTTGAAGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GCAGCAGCAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTTTGGTCCTGGGCTTCTaGGAGCTCCAGCCGATGCTG +
Preference number: 5 (lower is better)
Translates to: AAAACYSQERPNWIASASLVLGF*ELQPML
Trigger: CAGCATCGGCTGGAGCTCCAAGAAGCCCAGGACCAA...AGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTGCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GCACACCTACCAGGTGCAAGCCCACTCCAGGGTGGGGCTCAGCCCCTTCTGGTCTCTCCTTCATCCGAATaGTCTCCTCAGAAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: AHLPGASPLQGGAQPLLVSPSSE*SPQKGH
Trigger: GTGACCTTTCTGAGGAGACAATTCGGATGAAGGAGA...GACCAGAAGGGGCTGAGCCCCACCCTGGAGTGGGCTTGCACCTGGTAGGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCCCTGGGGAGTGGCGATaGGCTTCTAACAGCAACACC +
Preference number: 5 (lower is better)
Translates to: RELPDCAGKSKIWLCRRAPGEWR*ASNSNT
Trigger: GGTGTTGCTGTTAGAAGCCAATCGCCACTCCCCAGG...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp CTCCTCAGAAAGGTCACTGGATTCGATCACATGGCTGTGCTGGGCTaGGCACAGGGACTCGGCAGCCTGGAGTCTATTCTCAGCCACCAG +
Preference number: 5 (lower is better)
Translates to: LLRKVTGFDHMAVLG*AQGLGSLESILSHQ
Trigger: CTGGTGGCTGAGAATAGACTCCAGGCTGCCGAGTCCCTGTGCTCAGCCCAGCACAGCCATGTGATCGAATCCAGTGACCTTTCTGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp GAGACTTCTCAGCCACTGTGGTCAGCCTGTTATCCGCTAATTCTCTaGGCAGCCGCTCGGCCTGCGCCTTCTCCAATAGCAGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: ETSQPLWSACYPLIL*AAARPAPSPIAGSA
Trigger: AGCAGAGCCTGCTATTGGAGAAGGCGCAGGCCGAGCGGCTGCTCAGAGAATTAGCGGATAACAGGCTGACCACAGTGGCTGAGAAGTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS GCA 90 bp AGCTCTTCGATCTCACCACGCCGCAGGCTCAACTCTTCTTCCAGCTaGAGCACCCGAGACTTCTCAGCCACTGTGGTCAGCTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: SSSISPRRRLNSSSS*STRDFSATVVSSKS
Trigger: AGACTTGGAGCTGACCACAGTGGCTGAGAAGTCTCGGGTGCTGCAGCTGGAAGAAGAGTTGAGCCTGCGGCGTGGTGAGATCGAAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036999.10
CDS GCA 90 bp AGCTCTTCGATCTCACCACGCCGCAGGCTCAACTCTTCTTCCAGCTaGAGCACCCGAGACTTCTCAGCCACTGTGGTCAGCCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: SSSISPRRRLNSSSS*STRDFSATVVSLLS
Trigger: GGATAACAGGCTGACCACAGTGGCTGAGAAGTCTCGGGTGCTGCAGCTGGAAGAAGAGTTGAGCCTGCGGCGTGGTGAGATCGAAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS CCA 90 bp TGCTGTGCCTTCAGCAGGGCGATCTCCTTCTCCACCTCACAGATATaGCTGGTAGCCTTGGCTACTTCGGCTCTCTCCAAGTCGCGCTCA +
Preference number: 5 (lower is better)
Translates to: CCAFSRAISFSTSQI*LVALATSALSKSRS
Trigger: TGAGCGCGACTTGGAGAGAGCCGAAGTAGCCAAGGCTACCAGCCATATCTGTGAGGTGGAGAAGGAGATCGCCCTGCTGAAGGCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp GCTTTGTGTACTTCACGGCTCAGGTCTCTCTCGGGCCCTGGGGAGTaGCGATTGGCTTCTAACAGCAACACCCTCAGCTCGTTCAGACTC +
Preference number: 5 (lower is better)
Translates to: ALCTSRLRSLSGPGE*RLASNSNTLSSFRL
Trigger: GAGTCTGAACGAGCTGAGGGTGTTGCTGTTAGAAGCCAATCGCCACTCCCCAGGGCCCGAGAGAGACCTGAGCCGTGAAGTACACAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGACAGCTCCATCGTTCTaGCCCACCGGGTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKTAPSF*PTGSSK
Trigger: CTTGGACGACCCGGTGGGCAAGAACGATGGAGCTGT...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACTGTTTGTCCTCCTGTTaGTGGGCCTTGTCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: WCLVALTQATWAILRIYHCLSSC*WALSGW
Trigger: CCAGCCAGACAAGGCCCACAAACAGGAGGACAAACA...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp ACCACTGTCGGAGAGGTTGGAACCAGACTCATTGCCCGTCTTCACTaGGCTGTTAAGAACACTCTCCCGCAGGGGGATGACTCGGCCTGT +
Preference number: 5 (lower is better)
Translates to: TTVGEVGTRLIARLH*AVKNTLPQGDDSAC
Trigger: ACAGGCCGAGTCATCCCCCTGCGGGAGAGTGTTCTTAACAGCTCAGTGAAGACGGGCAATGAGTCTGGTTCCAACCTCTCCGACAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp CGTGCTTGGCCTGCAGGTTACCTAACTCCAGCTGGTGCTCCATCTTaGTGCCCTCTACCAGGGCCTTCAACTCTCCGATCTCCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: RAWPAGYLTPAGAPS*CPLPGPSTLRSPSA
Trigger: AGCAGAAGGAGATCGGAGAGTTGAAGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp GTCTCCAAGTCGTGCTTGGCCTGCAGGTTACCTAACTCCAGCTGGTaGTCCATCTTGATGCCCTCTACCAGGGCCTTCAACTCTCCGATC +
Preference number: 5 (lower is better)
Translates to: VSKSCLACRLPNSSW*SILMPSTRAFNSPI
Trigger: GATCGGAGAGTTGAAGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 90 bp TCCTTCTCCTTCCCATGCATGGCCGTCTCCAAGTCGTGCTTGGCCTaGAGGTTACCTAACTCCAGCTGGTGCTCCATCTTGATGCCCTCT +
Preference number: 5 (lower is better)
Translates to: SFSFPCMAVSKSCLA*RLPNSSWCSILMPS
Trigger: AGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGACGGCCATGCATGGGAAGGAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACACCTCTTTGTCCCTCTaGTTCAGCTTGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WCLVALTQATWAILRIYHTSLSL*FSLSCR
Trigger: CCTGCAGGACAAGCTGAACAAGAGGGACAAAGAGGT...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp TGGTGCCTAGTGGCGCTCACACAGGCCACCTGGGCCATCCTTAGGATTTACCACATCCGCCATTCAGCTTaGTGTACTTCACGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: WCLVALTQATWAILRIYHIRHSA*CTSRLR
Trigger: CCTGAGCCGTGAAGTACACAAAGCTGAATGGCGGAT...GTGGTAAATCCTAAGGATGGCCCAGGTGGCCTGTGTGAGCGCCACTAGGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp GGAACTGCAGGTCCTCCACCTTCCTCCTCTCCTCCTCCAGCTGATTaGACAGATCCACCTTCTCTTTCCTCACGTTTTCCACCAGCAACC +
Preference number: 5 (lower is better)
Translates to: GTAGPPPSSSPPPAD*TDPPSLSSRFPPAT
Trigger: GGTTGCTGGTGGAAAACGTGAGGAAAGAGAAGGTGGATCTGTCCAATCAGCTGGAGGAGGAGAGGAGGAAGGTGGAGGACCTGCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp ATTGTCTCCTCAGAAAGGTCACTGGATTCGATCACATGGCTGTGCTaGGCTGAGCACAGGGACTCGGCAGCCTGGAGTCTATTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: IVSSERSLDSITWLC*AEHRDSAAWSLFSA
Trigger: GGCTGAGAATAGACTCCAGGCTGCCGAGTCCCTGTGCTCAGCCCAGCACAGCCATGTGATCGAATCCAGTGACCTTTCTGAGGAGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CAGCCTGCTATAGTCAAGAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTGTCTCCAAGTCGTGCTaGGCCTGCAGGTTACCTAAC +
Preference number: 5 (lower is better)
Translates to: QPAIVKRGPTGSLQPLPVVSKSC*ACRLPN
Trigger: GTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGAC...AACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTCTTGACTATAGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp TTCTTTTCAGCCAGTGAGATCTGCTCTTTGAGGAACTCGATGGCTTaGGCCTGGCCACGGTACTCCACATCCAGTCCCTCTAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: FFSASEICSLRNSMA*AWPRYSTSSPSSSC
Trigger: GCAGGAGCTAGAGGGACTGGATGTGGAGTACCGTGGCCAGGCTCAAGCCATCGAGTTCCTCAAAGAGCAGATCTCACTGGCTGAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp CCTCTACAGTCTCCTTCATCCGAATTGTCTCCTCAGAAAGGTCACTaGATTCGATCACATGGCTGTGCTGGGCTGAGCACAGGGACTCGG +
Preference number: 5 (lower is better)
Translates to: PLQSPSSELSPQKGH*IRSHGCAGLSTGTR
Trigger: CCGAGTCCCTGTGCTCAGCCCAGCACAGCCATGTGATCGAATCCAGTGACCTTTCTGAGGAGACAATTCGGATGAAGGAGACTGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CCCAGAAAGAAAGGGAACCAGTTTGATTCCTCTCACCCAGCAAAACGCTGTAGGCCCAGGTGGAGGTCCTaGTCACCGCGCTTCACAGAA +
Preference number: 5 (lower is better)
Translates to: PRKKGNQFDSSHPAKRCRPRWRS*SPRFTE
Trigger: TTCTGTGAAGCGCGGTGACAAGGACCTCCACCTGGG...CCTACAGCGTTTTGCTGGGTGAGAGGAATCAAACTGGTTCCCTTTCTTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GAGAGGCCCAACTGGATCGCTTCAGCCTCTGCCAGTTCACGAAGCTCCTTGGGAAGCTTGGATTTCCAGTaGTCCATGAGCCCCATGTTT +
Preference number: 5 (lower is better)
Translates to: ERPNWIASASASSRSSLGSLDFQ*SMSPMF
Trigger: AAACATGGGGCTCATGGACAACTGGAAATCCAAGCT...TCCCAAGGAGCTTCGTGAACTGGCAGAGGCTGAAGCGATCCAGTTGGGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CGTGAGCTGCCCGATTGTGCTGGAAAGAGCAAGATTTGGCTCTGCAGACGGGCCGTCTCCAAGTCTCCTTaGGTGATGGATTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RELPDCAGKSKIWLCRRAVSKSP*VMDSSS
Trigger: GGAAGAAGAATCCATCACCAAAGGAGACTTGGAGAC...GGCCCGTCTGCAGAGCCAAATCTTGCTCTTTCCAGCACAATCGGGCAGCTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCGTGGCCTGCTGGACCTaGGCCTTGAGGTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: PQSQALLSEHGLATLPQFVACWT*ALRSAT
Trigger: GGTGGCAGACCTCAAGGCCAAGGTCCAGCAGGCCAC...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGAAGGCTGTCACCTCTTaGTCCCTCTTGTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKKAVTS*SLLFSL
Trigger: CAAGCTGAACAAGAGGGACAAAGAGGTGACAGCCTT...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GGCCTAAGCGACCTTGTACCAATGTGTAGGAGGGGCTCAATGCGTGGAGTCAAGAGCTTGGATTTCCAGTaGTCCATGAGCCCCATGTTT +
Preference number: 5 (lower is better)
Translates to: GLSDLVPMCRRGSMRGVKSLDFQ*SMSPMF
Trigger: AAACATGGGGCTCATGGACAACTGGAAATCCAAGCT...CTTGACTCCACGCATTGAGCCCCTCCTACACATTGGTACAAGGTCGCTTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGGCCAGCGAGTCCAGCTaGGATTTCCAGTTGTCCATG +
Preference number: 5 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLASESS*DFQLSM
Trigger: CATGGACAACTGGAAATCCAAGCTGGACTCGCTGGC...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCCCAGGTGGAGGTCCTaGTCACCGCGCTTCACAGAA +
Preference number: 5 (lower is better)
Translates to: PQSQALLSEHGLATLPQFPRWRS*SPRFTE
Trigger: TTCTGTGAAGCGCGGTGACAAGGACCTCCACCTGGG...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGAGCTGGTGCTCCATCTaGATGCCCTCTACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLSWCSI*MPSTRA
Trigger: GGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCT...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCGAGGAACTCGATGGCTaGAGCCTGGCCACGGTACTC +
Preference number: 5 (lower is better)
Translates to: PQSQALLSEHGLATLPQFEELDG*SLATVL
Trigger: GAGTACCGTGGCCAGGCTCAAGCCATCGAGTTCCTC...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 90 bp TCTCGTAATCTAGCATCTTCTTTTCAGCCAGTGAGATCTGCTCTTTaGGGAACTCGATGGCTTGAGCCTGGCCACGGTACTCCACATCCA +
Preference number: 5 (lower is better)
Translates to: SRNLASSFQPVRSAL*GTRWLEPGHGTPHP
Trigger: TGGATGTGGAGTACCGTGGCCAGGCTCAAGCCATCGAGTTCCTCAAAGAGCAGATCTCACTGGCTGAAAAGAAGATGCTAGATTACGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp CACTTGTTTTCTAGAGCACTTACTTGGGCCCTGAGCATGTCCATCTaGGATGTCAAGGCTGTCACCTCTTTGTCCCTCTTGTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HLFSRALTWALSMSI*DVKAVTSLSLLFSL
Trigger: CAAGCTGAACAAGAGGGACAAAGAGGTGACAGCCTTGACATCCCAGATGGACATGCTCAGGGCCCAAGTAAGTGCTCTAGAAAACAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGCCACTTCAGCCGCCTTaGGACCTGGCTTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLPLQPP*DLASQR
Trigger: TCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGG...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp ATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCCACTGGCCAGCGAGTCCAGCTaGGATTTCCAGTTGTCCATG +
Preference number: 5 (lower is better)
Translates to: ITSFIVRTWTCHTSTIPLASESS*DFQLSM
Trigger: CATGGACAACTGGAAATCCAAGCTGGACTCGCTGGC...CAGTGGAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp GGGGTCTTTAGAGTAACATGGCAGGGGTTCCCAGAAAGAAAGGGAACCAGTTTGTCTCCTTCATCCGAATaGTCTCCTCAGAAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: GVFRVTWQGFPERKGTSLSPSSE*SPQKGH
Trigger: GTGACCTTTCTGAGGAGACAATTCGGATGAAGGAGA...CAAACTGGTTCCCTTTCTTTCTGGGAACCCCTGCCATGTTACTCTAAAGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCTGTTTGTCCTCCTGTTaGTGGGCCTTGTCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PQSQALLSEHGLATLPQFCLSSC*WALSGW
Trigger: CCAGCCAGACAAGGCCCACAAACAGGAGGACAAACA...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 90 bp ATCTTCTTCTCTCCTGATTTGCACTTGTTTTCTAGAGCACTTACTTaGGCCCTGAGCATGTCCATCTGGGATGTCAAGGCTGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: IFFSPDLHLFSRALT*ALSMSIWDVKAVTS
Trigger: AGAGGTGACAGCCTTGACATCCCAGATGGACATGCTCAGGGCCCAAGTAAGTGCTCTAGAAAACAAGTGCAAATCAGGAGAGAAGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS-3UTR CAA 90 bp CCTCAATCACAAGCTTTATTGTCCGAACATGGACTTGCCACACTTCCACAATTCAGCTCCAAGTCTCCTTaGGTGATGGATTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PQSQALLSEHGLATLPQFSSKSP*VMDSSS
Trigger: GGAAGAAGAATCCATCACCAAAGGAGACTTGGAGCT...GAATTGTGGAAGTGTGGCAAGTCCATGTTCGGACAATAAAGCTTGTGATTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036999.10
CDS CAA 72 bp CTGCCCGAGCCCTCAGCGGTGGGCTGGCGGGTCAGCTaGGAGGGCCGCGTGAAGATGCCCTGTAGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: LPEPSAVGWRVS*EGRVKMPCRAG
Trigger: CCCGGCTCTACAGGGCATCTTCACGCGGCCCTCCAAGCTGACCCGCCAGCCCACCGCTGAGGGCTCGGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp GAGTGCGTATCACTGCCCGAGCCCTCAGCGGTGGGCTaGCGGGTCAGCTTGGAGGGCCGCGTGAAGATGCCC +
Preference number: 6 (lower is better)
Translates to: ECVSLPEPSAVG*RVSLEGRVKMP
Trigger: GGGCATCTTCACGCGGCCCTCCAAGCTGACCCGCCAGCCCACCGCTGAGGGCTCGGGCAGTGATACGCACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 90 bp TGCGTATCACTGCCCGAGCCCTCAGCGGTGGGCTGGCGGGTCAGCTaGGAGGGCCGCGTGAAGATGCCCTGTAGAGCCGGGCACTCGAAG +
Preference number: 6 (lower is better)
Translates to: CVSLPEPSAVGWRVS*EGRVKMPCRAGHSK
Trigger: CTTCGAGTGCCCGGCTCTACAGGGCATCTTCACGCGGCCCTCCAAGCTGACCCGCCAGCCCACCGCTGAGGGCTCGGGCAGTGATACGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp CAGCGGTGGGCTGGCGGGTCAGCTTGGAGGGCCGCGTaGAGATGCCCTGTAGAGCCGGGCACTCGAAGTAGC +
Preference number: 6 (lower is better)
Translates to: QRWAGGSAWRAA*RCPVEPGTRSS
Trigger: GCTACTTCGAGTGCCCGGCTCTACAGGGCATCTTCACGCGGCCCTCCAAGCTGACCCGCCAGCCCACCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp GCCACCAGAAGCTTTTCCCGCAGCCGCTCGGCCTCCTaGCTGCTCTGGGCTTCGGCCCTCTGCAGCATCTCG +
Preference number: 6 (lower is better)
Translates to: ATRSFSRSRSAS*LLWASALCSIS
Trigger: CGAGATGCTGCAGAGGGCCGAAGCCCAGAGCAGGCAGGAGGCCGAGCGGCTGCGGGAAAAGCTTCTGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp AGCCGCTCGGCCTGCGCCTTCTCCAATAGCAGGCTCTaGTCCAGCTCCCCAATGCGCGCGTGCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SRSACAFSNSRL*SSSPMRACSSW
Trigger: CCAGCTGGAGCACGCGCGCATTGGGGAGCTGGAGCAGAGCCTGCTATTGGAGAAGGCGCAGGCCGAGCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS CAA 90 bp GAGACGGTGGTGGCGGCTCCAGACGAGGAGGGGCCCGATGCCTGTTaGTGCAGGGGAGACCCTTCTTTGGAGCCACTGGTCGAGGCCACC +
Preference number: 6 (lower is better)
Translates to: ETVVAAPDEEGPDAC*CRGDPSLEPLVEAT
Trigger: GGTGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCGTCTGGAGCCGCCACCACCGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp GACGGTGGTGGCGGCTCCAGACGAGGAGGGGCCCGATaGCTGTTTGTGCAGGGGAGACCCTTCTTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: DGGGGSRRGGAR*LFVQGRPFFGA
Trigger: GGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCGTCTGGAGCCGCCACCACCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp AGGGACAGGTTCTGGGCCGTGAGGGATTCCACCGAGTaGGTATCACTGCCCGAGCCCTCAGCGGTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RDRFWAVRDSTE*VSLPEPSAVGW
Trigger: CCAGCCCACCGCTGAGGGCTCGGGCAGTGATACGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp ACTCGGCCTGTGAGTGGGGGCGTGGCCGTGCCAGAATaGAGGGACAGGTTCTGGGCCGTGAGGGATTCCACC +
Preference number: 6 (lower is better)
Translates to: TRPVSGGVAVPE*RDRFWAVRDST
Trigger: GGTGGAATCCCTCACGGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCACGCCCCCACTCACAGGCCGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp TGGCCACGGTACTCCACATCCAGTCCCTCTAGCTCCTaGGCGCGCAGCTGGGCGTCGCGACATTGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WPRYSTSSPSSS*ARSWASRHWSW
Trigger: CCAGGACCAATGTCGCGACGCCCAGCTGCGCGCGCAGGAGCTAGAGGGACTGGATGTGGAGTACCGTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp CAGCCGCCTTTGGACCTGGCTTCTCAGAGACGGTGGTaGCGGCTCCAGACGAGGAGGGGCCCGATGCCTGTT +
Preference number: 6 (lower is better)
Translates to: QPPLDLASQRRW*RLQTRRGPMPV
Trigger: AACAGGCATCGGGCCCCTCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp CTTCAGCCGCCTTTGGACCTGGCTTCTCAGAGACGGTaGTGGCGGCTCCAGACGAGGAGGGGCCCGATGCCT +
Preference number: 6 (lower is better)
Translates to: LQPPLDLASQRR*WRLQTRRGPMP
Trigger: AGGCATCGGGCCCCTCCTCGTCTGGAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp TTGCCCACCGGGTCGTCCAAGACCACGCCGGCCCACTaGCCTGGCGCAAACTGTGTCTCACCCAGGTACTGC +
Preference number: 6 (lower is better)
Translates to: LPTGSSKTTPAH*PGANCVSPRYC
Trigger: GCAGTACCTGGGTGAGACACAGTTTGCGCCAGGCCAGTGGGCCGGCGTGGTCTTGGACGACCCGGTGGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp TCTAGCTCCTGCGCGCGCAGCTGGGCGTCGCGACATTaGTCCTGGGCTTCTTGGAGCTCCAGCCGATGCTGG +
Preference number: 6 (lower is better)
Translates to: SSSCARSWASRH*SWASWSSSRCW
Trigger: CCAGCATCGGCTGGAGCTCCAAGAAGCCCAGGACCAATGTCGCGACGCCCAGCTGCGCGCGCAGGAGCTAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp CTCAGCGGCCTCTGGGTGGTCTGCGGGTGGCGGGCCTaGCTGGAGGAGACAGTGTTGCAGCTCTTCGATCTC +
Preference number: 6 (lower is better)
Translates to: LSGLWVVCGWRA*LEETVLQLFDL
Trigger: GAGATCGAAGAGCTGCAACACTGTCTCCTCCAGTCAGGCCCGCCACCCGCAGACCACCCAGAGGCCGCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp GCGGCTCCAGACGAGGAGGGGCCCGATGCCTGTTTGTaGAGGGGAGACCCTTCTTTGGAGCCACTGGTCGAG +
Preference number: 6 (lower is better)
Translates to: AAPDEEGPDACL*RGDPSLEPLVE
Trigger: CTCGACCAGTGGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCGTCTGGAGCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp GGGGGCGTGGCCGTGCCAGAATGCAGGGACAGGTTCTaGGCCGTGAGGGATTCCACCGAGTGCGTATCACTG +
Preference number: 6 (lower is better)
Translates to: GGVAVPECRDRF*AVRDSTECVSL
Trigger: CAGTGATACGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCACGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp AACACTCTCCCGCAGGGGGATGACTCGGCCTGTGAGTaGGGGCGTGGCCGTGCCAGAATGCAGGGACAGGTT +
Preference number: 6 (lower is better)
Translates to: NTLPQGDDSACE*GRGRARMQGQV
Trigger: AACCTGTCCCTGCATTCTGGCACGGCCACGCCCCCACTCACAGGCCGAGTCATCCCCCTGCGGGAGAGTGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp GCGGCCTCTGGGTGGTCTGCGGGTGGCGGGCCTGACTaGAGGAGACAGTGTTGCAGCTCTTCGATCTCACCA +
Preference number: 6 (lower is better)
Translates to: AASGWSAGGGPD*RRQCCSSSISP
Trigger: TGGTGAGATCGAAGAGCTGCAACACTGTCTCCTCCAGTCAGGCCCGCCACCCGCAGACCACCCAGAGGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp TGGCCGTGCCAGAATGCAGGGACAGGTTCTGGGCCGTaGGGGATTCCACCGAGTGCGTATCACTGCCCGAGC +
Preference number: 6 (lower is better)
Translates to: WPCQNAGTGSGP*GIPPSAYHCPS
Trigger: GCTCGGGCAGTGATACGCACTCGGTGGAATCCCTCACGGCCCAGAACCTGTCCCTGCATTCTGGCACGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp CCCTCTACCAGGGCCTTCAACTCTCCGATCTCCTTCTaGTGGGCGCCTGGGCCAGAGTTCAGCGTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: PSTRAFNSPISF*WAPGPEFSVAF
Trigger: GAAGGCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAGGAGATCGGAGAGTTGAAGGCCCTGGTAGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp GGGCCTGGTTCAGCGCATCCCGCAGGGCGTCTTCCGTaGTCACCAACTGATGCTGCAGTTTCAGCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: GPGSAHPAGRLP*SPTDAAVSAAR
Trigger: CCGAGCTGCTGAAACTGCAGCATCAGTTGGTGAGCACGGAAGACGCCCTGCGGGATGCGCTGAACCAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp GGCCTTCAACTCTCCGATCTCCTTCTGCTGGGCGCCTaGGCCAGAGTTCAGCGTGGCCTTCAGGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GLQLSDLLLLGA*ARVQRGLQVLQ
Trigger: CTGGAGGACCTGAAGGCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAGGAGATCGGAGAGTTGAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 90 bp GACGAGGAGGGGCCCGATGCCTGTTTGTGCAGGGGAGACCCTTCTTaGGAGCCACTGGTCGAGGCCACCACGGAAGATGAAGCAGACCCA +
Preference number: 6 (lower is better)
Translates to: DEEGPDACLCRGDPS*EPLVEATTEDEADP
Trigger: TGGGTCTGCTTCATCTTCCGTGGTGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGGCATCGGGCCCCTCCTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp GTCTCCCAGGAAGTCATCACCCACTTCAGCCGCCTTTaGACCTGGCTTCTCAGAGACGGTGGTGGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: VSQEVITHFSRL*TWLLRDGGGGS
Trigger: GGAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGGGTGATGACTTCCTGGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp TCTCCTTCTGCTGGGCGCCTGGGCCAGAGTTCAGCGTaGCCTTCAGGTCCTCCAGGGATTTCTGGTGATCGG +
Preference number: 6 (lower is better)
Translates to: SPSAGRLGQSSA*PSGPPGISGDR
Trigger: CCGATCACCAGAAATCCCTGGAGGACCTGAAGGCCACGCTGAACTCTGGCCCAGGCGCCCAGCAGAAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp CCACCAACCAGCACACGGTCTCCCAGGTGGAGGTCCTaGTCACCGCGCTTCACAGAACCACTGTCGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PPTSTRSPRWRS*SPRFTEPLSER
Trigger: CCTCTCCGACAGTGGTTCTGTGAAGCGCGGTGACAAGGACCTCCACCTGGGAGACCGTGTGCTGGTTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 90 bp CCACCACAAAGTCTCCCAGGAAGTCATCACCCACTTCAGCCGCCTTaGGACCTGGCTTCTCAGAGACGGTGGTGGCGGCTCCAGACGAGG +
Preference number: 6 (lower is better)
Translates to: PPQSLPGSHHPLQPP*DLASQRRWWRLQTR
Trigger: CCTCGTCTGGAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGGGTGATGACTTCCTGGGAGACTTTGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp AGCGCATCCCGCAGGGCGTCTTCCGTGCTCACCAACTaGTGCTGCAGTTTCAGCAGCTCGGGTGGTGAAGCT +
Preference number: 6 (lower is better)
Translates to: SASRRASSVLTN*CCSFSSSGGEA
Trigger: AGCTTCACCACCCGAGCTGCTGAAACTGCAGCATCAGTTGGTGAGCACGGAAGACGCCCTGCGGGATGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp GGCCCGATGCCTGTTTGTGCAGGGGAGACCCTTCTTTaGAGCCACTGGTCGAGGCCACCACGGAAGATGAAG +
Preference number: 6 (lower is better)
Translates to: GPMPVCAGETLL*SHWSRPPRKMK
Trigger: CTTCATCTTCCGTGGTGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGGCATCGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp GTCTTCGTCCCACCAACCAGCACACGGTCTCCCAGGTaGAGGTCCTTGTCACCGCGCTTCACAGAACCACTG +
Preference number: 6 (lower is better)
Translates to: VFVPPTSTRSPR*RSLSPRFTEPL
Trigger: CAGTGGTTCTGTGAAGCGCGGTGACAAGGACCTCCACCTGGGAGACCGTGTGCTGGTTGGTGGGACGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp ACTTCACGGCTCAGGTCTCTCTCGGGCCCTGGGGAGTaGCGATTGGCTTCTAACAGCAACACCCTCAGCTCG +
Preference number: 6 (lower is better)
Translates to: TSRLRSLSGPGE*RLASNSNTLSS
Trigger: CGAGCTGAGGGTGTTGCTGTTAGAAGCCAATCGCCACTCCCCAGGGCCCGAGAGAGACCTGAGCCGTGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp CTCTGCTCCAGCTCCCCAATGCGCGCGTGCTCCAGCTaGGTCTGGGTCTCCAAGTCTCCTTTGGTGATGGAT +
Preference number: 6 (lower is better)
Translates to: LCSSSPMRACSS*VWVSKSPLVMD
Trigger: ATCCATCACCAAAGGAGACTTGGAGACCCAGACCCAGCTGGAGCACGCGCGCATTGGGGAGCTGGAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS CAA 72 bp AGTCTCCCAGGAAGTCATCACCCACTTCAGCCGCCTTaGGACCTGGCTTCTCAGAGACGGTGGTGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SLPGSHHPLQPP*DLASQRRWWRL
Trigger: GAGCCGCCACCACCGTCTCTGAGAAGCCAGGTCCAAAGGCGGCTGAAGTGGGTGATGACTTCCTGGGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp TTGTCCTGGAGCAAGGTACTGTCTCGCTGGTGCTCCTaGCTAGCCGACAGCAGCCGCTCTCGCAGCCGCAAA +
Preference number: 6 (lower is better)
Translates to: LSWSKVLSRWCS*LADSSRSRSRK
Trigger: TTTGCGGCTGCGAGAGCGGCTGCTGTCGGCTAGCAAGGAGCACCAGCGAGACAGTACCTTGCTCCAGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 90 bp GTCTTCGTCCCACCAACCAGCACACGGTCTCCCAGGTGGAGGTCCTaGTCACCGCGCTTCACAGAACCACTGTCGGAGAGGTTGGAACCA +
Preference number: 6 (lower is better)
Translates to: VFVPPTSTRSPRWRS*SPRFTEPLSERLEP
Trigger: TGGTTCCAACCTCTCCGACAGTGGTTCTGTGAAGCGCGGTGACAAGGACCTCCACCTGGGAGACCGTGTGCTGGTTGGTGGGACGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp ATCTCACCACGCCGCAGGCTCAACTCTTCTTCCAGCTaGAGCACCCGAGACTTCTCAGCCACTGTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: ISPRRRLNSSSS*STRDFSATVVS
Trigger: GCTGACCACAGTGGCTGAGAAGTCTCGGGTGCTGCAGCTGGAAGAAGAGTTGAGCCTGCGGCGTGGTGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp CTGTTATCCGCTAATTCTCTGAGCAGCCGCTCGGCCTaGGCCTTCTCCAATAGCAGGCTCTGCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LLSANSLSSRSA*AFSNSRLCSSS
Trigger: GGAGCTGGAGCAGAGCCTGCTATTGGAGAAGGCGCAGGCCGAGCGGCTGCTCAGAGAATTAGCGGATAACAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100647.7
CDS CAA 90 bp CCGCGCTTCACAGAACCACTGTCGGAGAGGTTGGAACCAGACTCATaGCCCGTCTTCACTGAGCTGTTAAGAACACTCTCCCGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: PRFTEPLSERLEPDS*PVFTELLRTLSRRG
Trigger: CCCCCTGCGGGAGAGTGTTCTTAACAGCTCAGTGAAGACGGGCAATGAGTCTGGTTCCAACCTCTCCGACAGTGGTTCTGTGAAGCGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 90 bp AGGCCCTCCTTCTCCTTCCCATGCATGGCCGTCTCCAAGTCGTGCTaGGCCTGCAGGTTACCTAACTCCAGCTGGTGCTCCATCTTGATG +
Preference number: 6 (lower is better)
Translates to: RPSFSFPCMAVSKSC*ACRLPNSSWCSILM
Trigger: CATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGACGGCCATGCATGGGAAGGAGAAGGAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp CTGGCTGGTGAATACCGTTGGCAGAACCGGAATTGCTaGTGGTCTGAGTCCTGTCTGAGCAGCCCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: LAGEYRWQNRNC*WSESCLSSPSG
Trigger: CCCTGAGGGGCTGCTCAGACAGGACTCAGACCATCAGCAATTCCGGTTCTGCCAACGGTATTCACCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp TCCTTCTCCTTCCCATGCATGGCCGTCTCCAAGTCGTaGTTGGCCTGCAGGTTACCTAACTCCAGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: SFSFPCMAVSKS*LACRLPNSSWC
Trigger: GCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGACGGCCATGCATGGGAAGGAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp CCTGTTTGTGCAGGGGAGACCCTTCTTTGGAGCCACTaGTCGAGGCCACCACGGAAGATGAAGCAGACCCAA +
Preference number: 6 (lower is better)
Translates to: PVCAGETLLWSH*SRPPRKMKQTQ
Trigger: TTGGGTCTGCTTCATCTTCCGTGGTGGCCTCGACCAGTGGCTCCAAAGAAGGGTCTCCCCTGCACAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp TCTCCTTCCCATGCATGGCCGTCTCCAAGTCGTGCTTaGCCTGCAGGTTACCTAACTCCAGCTGGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: SPSHAWPSPSRA*PAGYLTPAGAP
Trigger: TGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGACGGCCATGCATGGGAAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp TTCTCCTTCCCATGCATGGCCGTCTCCAAGTCGTGCTaGGCCTGCAGGTTACCTAACTCCAGCTGGTGCTCC +
Preference number: 6 (lower is better)
Translates to: FSFPCMAVSKSC*ACRLPNSSWCS
Trigger: GGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGACGGCCATGCATGGGAAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 90 bp TCGTGCTTGGCCTGCAGGTTACCTAACTCCAGCTGGTGCTCCATCTaGATGCCCTCTACCAGGGCCTTCAACTCTCCGATCTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SCLACRLPNSSWCSI*MPSTRAFNSPISFC
Trigger: GCAGAAGGAGATCGGAGAGTTGAAGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp GCCAGTGAGATCTGCTCTTTGAGGAACTCGATGGCTTaGGCCTGGCCACGGTACTCCACATCCAGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: ASEICSLRNSMA*AWPRYSTSSPS
Trigger: AGAGGGACTGGATGTGGAGTACCGTGGCCAGGCTCAAGCCATCGAGTTCCTCAAAGAGCAGATCTCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp CACCAACTGATGCTGCAGTTTCAGCAGCTCGGGTGGTaGAGCTGGGTCAATGAGGGAGTAGCGTCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: HQLMLQFQQLGW*SWVNEGVASLL
Trigger: GAGCAGAGACGCTACTCCCTCATTGACCCAGCTTCACCACCCGAGCTGCTGAAACTGCAGCATCAGTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp TCGTGCTTGGCCTGCAGGTTACCTAACTCCAGCTGGTaGTCCATCTTGATGCCCTCTACCAGGGCCTTCAAC +
Preference number: 6 (lower is better)
Translates to: SCLACRLPNSSW*SILMPSTRAFN
Trigger: GTTGAAGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS GCA 72 bp TTCCCATGCATGGCCGTCTCCAAGTCGTGCTTGGCCTaGAGGTTACCTAACTCCAGCTGGTGCTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: FPCMAVSKSCLA*RLPNSSWCSIL
Trigger: CAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGCCAAGCACGACTTGGAGACGGCCATGCATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp ATCTCCTTCTCCACCTCACAGATATGGCTGGTAGCCTaGGCTACTTCGGCTCTCTCCAAGTCGCGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: ISFSTSQIWLVA*ATSALSKSRSA
Trigger: GGCTGAGCGCGACTTGGAGAGAGCCGAAGTAGCCAAGGCTACCAGCCATATCTGTGAGGTGGAGAAGGAGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp GCCTGCAGGTTACCTAACTCCAGCTGGTGCTCCATCTaGATGCCCTCTACCAGGGCCTTCAACTCTCCGATC +
Preference number: 6 (lower is better)
Translates to: ACRLPNSSWCSI*MPSTRAFNSPI
Trigger: GATCGGAGAGTTGAAGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp GGAGAGGTTGGAACCAGACTCATTGCCCGTCTTCACTaGGCTGTTAAGAACACTCTCCCGCAGGGGGATGAC +
Preference number: 6 (lower is better)
Translates to: GEVGTRLIARLH*AVKNTLPQGDD
Trigger: GTCATCCCCCTGCGGGAGAGTGTTCTTAACAGCTCAGTGAAGACGGGCAATGAGTCTGGTTCCAACCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS TCA 72 bp CCTGCAGGTTACCTAACTCCAGCTGGTGCTCCATCTTaGTGCCCTCTACCAGGGCCTTCAACTCTCCGATCT +
Preference number: 6 (lower is better)
Translates to: PAGYLTPAGAPS*CPLPGPSTLRS
Trigger: AGATCGGAGAGTTGAAGGCCCTGGTAGAGGGCATCAAGATGGAGCACCAGCTGGAGTTAGGTAACCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp TGTCACCGCGCTTCACAGAACCACTGTCGGAGAGGTTaGAACCAGACTCATTGCCCGTCTTCACTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: CHRASQNHCRRG*NQTHCPSSLSC
Trigger: ACAGCTCAGTGAAGACGGGCAATGAGTCTGGTTCCAACCTCTCCGACAGTGGTTCTGTGAAGCGCGGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp TTGTCACCGCGCTTCACAGAACCACTGTCGGAGAGGTaGGAACCAGACTCATTGCCCGTCTTCACTGAGCTG +
Preference number: 6 (lower is better)
Translates to: LSPRFTEPLSER*EPDSLPVFTEL
Trigger: CAGCTCAGTGAAGACGGGCAATGAGTCTGGTTCCAACCTCTCCGACAGTGGTTCTGTGAAGCGCGGTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp GGTCCTCCACCTTCCTCCTCTCCTCCTCCAGCTGATTaGACAGATCCACCTTCTCTTTCCTCACGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: GPPPSSSPPPAD*TDPPSLSSRFP
Trigger: TGGAAAACGTGAGGAAAGAGAAGGTGGATCTGTCCAATCAGCTGGAGGAGGAGAGGAGGAAGGTGGAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 90 bp TGGAGGTCCTTGTCACCGCGCTTCACAGAACCACTGTCGGAGAGGTaGGAACCAGACTCATTGCCCGTCTTCACTGAGCTGTTAAGAACA +
Preference number: 6 (lower is better)
Translates to: WRSLSPRFTEPLSER*EPDSLPVFTELLRT
Trigger: TGTTCTTAACAGCTCAGTGAAGACGGGCAATGAGTCTGGTTCCAACCTCTCCGACAGTGGTTCTGTGAAGCGCGGTGACAAGGACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CCA 72 bp TCTCCTTCATCCGAATTGTCTCCTCAGAAAGGTCACTaGATTCGATCACATGGCTGTGCTGGGCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: SPSSELSPQKGH*IRSHGCAGLST
Trigger: TGTGCTCAGCCCAGCACAGCCATGTGATCGAATCCAGTGACCTTTCTGAGGAGACAATTCGGATGAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp ACAGAACCACTGTCGGAGAGGTTGGAACCAGACTCATaGCCCGTCTTCACTGAGCTGTTAAGAACACTCTCC +
Preference number: 6 (lower is better)
Translates to: TEPLSERLEPDS*PVFTELLRTLS
Trigger: GGAGAGTGTTCTTAACAGCTCAGTGAAGACGGGCAATGAGTCTGGTTCCAACCTCTCCGACAGTGGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp TCCTTCAGTTTCTGTTCCTTTATCCGCCATTCAGCTTaGTGTACTTCACGGCTCAGGTCTCTCTCGGGCCCT +
Preference number: 6 (lower is better)
Translates to: SFSFCSFIRHSA*CTSRLRSLSGP
Trigger: AGGGCCCGAGAGAGACCTGAGCCGTGAAGTACACAAAGCTGAATGGCGGATAAAGGAACAGAAACTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp TGTCCTGCAGGCCCTCTACAGTCTCCTTCATCCGAATaGTCTCCTCAGAAAGGTCACTGGATTCGATCACAT +
Preference number: 6 (lower is better)
Translates to: CPAGPLQSPSSE*SPQKGHWIRSH
Trigger: ATGTGATCGAATCCAGTGACCTTTCTGAGGAGACAATTCGGATGAAGGAGACTGTAGAGGGCCTGCAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7
CDS CAA 72 bp AGGAGAGAATCTATCTTCTTCTCTCCTGATTTGCACTaGTTTTCTAGAGCACTTACTTGGGCCCTGAGCATG +
Preference number: 6 (lower is better)
Translates to: RRESIFFSPDLH*FSRALTWALSM
Trigger: CATGCTCAGGGCCCAAGTAAGTGCTCTAGAAAACAAGTGCAAATCAGGAGAGAAGAAGATAGATTCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036999.10
ENSMUST00000100647.7