Pregenerated sensors for CLIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049550Ensembl transcript IDs: ENSMUST00000031382.14, ENSMUST00000063905.12, ENSMUST00000111561.8, ENSMUST00000111564.8, ENSMUST00000111566.9, ENSMUST00000137363.8, ENSMUST00000144121.2, ENSMUST00000149410.2, ENSMUST00000154672.2
Found 812 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCCCTGTCAGCAGCTTCCACCATGGTCCGTAGCTGGTCCATCTTaGCCTCTAGTTCCAGGACATGCTGGTCATGCCCATCTCGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SPCQQLPPWSVAGPS*PLVPGHAGHAHLGP Trigger: TGGCCCGAGATGGGCATGACCAGCATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR GCA 90 bp | TCCGCCTCCTGCAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTaGTGGTCTTCTGCACTGTCCAGTCTCGCTTTGACGGCCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SASCSLFSVSSISTR*WSSALSSLALTASR Trigger: CCTGGAGGCCGTCAAAGCGAGACTGGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CCA 90 bp | AGCTCCACTTTCTCCCTGTCAGCAGCTTCCACCATGGTCCGTAGCTaGTCCATCTTGGCCTCTAGTTCCAGGACATGCTGGTCATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: SSTFSLSAASTMVRS*SILASSSRTCWSCP Trigger: TGGGCATGACCAGCATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGAAAGTGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR GCA 90 bp | GTCCGTTCCAATGCCTTTGCTAAAGGACACCTTCAGCTCCTCCATTaGCTGCTGGTGGGATGCTATGGCGGTCTCCAGTTTGGACTTCCA | + |
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Preference number: 1 (lower is better) Translates to: VRSNAFAKGHLQLLH*LLVGCYGGLQFGLP Trigger: TGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCTGAAGGTGTCCTTTAGCAAAGGCATTGGAACGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR TCA 90 bp | ACTCGTTCTCTTTGGAAAGCTTCTCAGTGGCCGTGTGCAGAGCCTTaGTCTCCTTCTGAAACGCCTCCTCTCGAGCTCCGAAGTGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: TRSLWKASQWPCAEP*SPSETPPLELRSVP Trigger: AGGAACACTTCGGAGCTCGAGAGGAGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGGCCACTGAGAAGCTTTCCAAAGAGAACGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CCA 90 bp | CCAATGCCTTTGCTAAAGGACACCTTCAGCTCCTCCATTGCCTGCTaGTGGGATGCTATGGCGGTCTCCAGTTTGGACTTCCATAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: PMPLLKDTFSSSIAC*WDAMAVSSLDFHRA Trigger: AGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCTGAAGGTGTCCTTTAGCAAAGGCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR TCA 90 bp | TTGGAAAGCTTCTCAGTGGCCGTGTGCAGAGCCTTGATCTCCTTCTaGAACGCCTCCTCTCGAGCTCCGAAGTGTTCCTTCAAAGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: LESFSVAVCRALISF*NASSRAPKCSFKEV Trigger: GACTTCTTTGAAGGAACACTTCGGAGCTCGAGAGGAGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGGCCACTGAGAAGCTTTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR GCA 90 bp | GTTCCAATGCCTTTGCTAAAGGACACCTTCAGCTCCTCCATTGCCTaGTGGTGGGATGCTATGGCGGTCTCCAGTTTGGACTTCCATAGA | + |
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Preference number: 1 (lower is better) Translates to: VPMPLLKDTFSSSIA*WWDAMAVSSLDFHR Trigger: TCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCTGAAGGTGTCCTTTAGCAAAGGCATTGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CCA 90 bp | ATGCCTTTGCTAAAGGACACCTTCAGCTCCTCCATTGCCTGCTGGTaGGATGCTATGGCGGTCTCCAGTTTGGACTTCCATAGAGCTATC | + |
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Preference number: 1 (lower is better) Translates to: MPLLKDTFSSSIACW*DAMAVSSLDFHRAI Trigger: GATAGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCTGAAGGTGTCCTTTAGCAAAGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR GCA 90 bp | GGGCAGAGGCCTATATACAATGACGGAAGTTCTCGTCCTGCACACTaGGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: GQRPIYNDGSSRPAH*VEVHVAPFYIFSKT Trigger: TGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGCAGGACGAGAACTTCCGTCATTGTATATAGGCCTCTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR CCA 90 bp | TCCTCTCGAGCTCCGAAGTGTTCCTTCAAAGAAGTCATCTCGCCCTaGTGGTCAGTATGGATGGCTTCTAGCTTTTCTTGCAAAGCACTT | + |
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Preference number: 1 (lower is better) Translates to: SSRAPKCSFKEVISP*WSVWMASSFSCKAL Trigger: AAGTGCTTTGCAAGAAAAGCTAGAAGCCATCCATACTGACCACCAGGGCGAGATGACTTCTTTGAAGGAACACTTCGGAGCTCGAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CCA 90 bp | GACTTTTCTGAGACGGTAGCCACCCTAGTGTCTTCTAACTCCCTCTaGAGTTTGTCAGCTTTGGTCTTTTCAAAGAGCAGGCTCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: DFSETVATLVSSNSL*SLSALVFSKSRLCS Trigger: TGAACAGAGCCTGCTCTTTGAAAAGACCAAAGCTGACAAACTCCAGAGGGAGTTAGAAGACACTAGGGTGGCTACCGTCTCAGAAAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CCA 90 bp | TTGGACTTCCATAGAGCTATCACATCGGAGTTCTCCTTATTAGCGTaGTCGAGCTTGCTTCTCAGGGACTCGTTCTCTTTGGAAAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LDFHRAITSEFSLLA*SSLLLRDSFSLESF Trigger: GAAGCTTTCCAAAGAGAACGAGTCCCTGAGAAGCAAGCTCGACCACGCTAATAAGGAGAACTCCGATGTGATAGCTCTATGGAAGTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR GCA 90 bp | GATGTAAAATTACCAATGACCTCGCTTTGTTCAGTGTACTTGGCCTaGAGAACCTCTAGCTCCTTTACCTTAATCTCCGCCTCCTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: DVKLPMTSLCSVYLA*RTSSSFTLISASCS Trigger: ACTGCAGGAGGCGGAGATTAAGGTAAAGGAGCTAGAGGTTCTGCAGGCCAAGTACACTGAACAAAGCGAGGTCATTGGTAATTTTACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR TCA 90 bp | TCCTCCTTTTGGTGCAGTTTATTTACGGTATCTTGCATCCTTGTCTaGGCAGAGACCGCCTCCTCTGAAGTACTGGCAAACTTTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: SSFWCSLFTVSCILV*AETASSEVLANFSF Trigger: GAAAGAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGATGCAAGATACCGTAAATAAACTGCACCAAAAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR TCA 90 bp | ATGATCTTCATCAGCTTGGCCTGCATGGTCTCCATCTCTTTAGCATaGGCAGACCGCTCAGAGTCCTGTTTACTCTGTAAACTTTCTATT | + |
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Preference number: 1 (lower is better) Translates to: MIFISLACMVSISLA*ADRSESCLLCKLSI Trigger: AATAGAAAGTTTACAGAGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAGGCCAAGCTGATGAAGATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CCA 90 bp | CACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTaGTACAATGTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGA | + |
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Preference number: 1 (lower is better) Translates to: HLSQRVSLGTNRNCA*YNVLNLKNPENKDG Trigger: TCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR TCA 90 bp | ACGGATCTTTCCTTCAGACGTAATTCATCATTCATCTTTGTCAGCTaGGAAGAGTTATCTCCTGACATCTTCATTATTTCTGCAATGTCG | + |
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Preference number: 1 (lower is better) Translates to: TDLSFRRNSSFIFVS*EELSPDIFIISAMS Trigger: CGACATTGCAGAAATAATGAAGATGTCAGGAGATAACTCTTCTCAGCTGACAAAGATGAATGATGAATTACGTCTGAAGGAAAGATCCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CAA 90 bp | AGGCTGGCGGGCGTGGCGGCCATCACTCGCCTCACAGCGGCGGCTTaGGCTTTGGCTGGGGTAGTAGACGGGAAGCCAATCTTTGTCACT | + |
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Preference number: 2 (lower is better) Translates to: RLAGVAAITRLTAAA*ALAGVVDGKPIFVT Trigger: AGTGACAAAGATTGGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAGGCGAGTGATGGCCGCCACGCCCGCCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CAA 90 bp | TTCTCCCTGTCAGCAGCTTCCACCATGGTCCGTAGCTGGTCCATCTaGGCCTCTAGTTCCAGGACATGCTGGTCATGCCCATCTCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FSLSAASTMVRSWSI*ASSSRTCWSCPSRA Trigger: GGCCCGAGATGGGCATGACCAGCATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR CCA 90 bp | ATCGGAGTTCTCCTTATTAGCGTGGTCGAGCTTGCTTCTCAGGGACTCGTTCTCGGCTTCGCTTCAGGCTaGCGGGCGTGGCGGCCATCA | + |
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Preference number: 2 (lower is better) Translates to: IGVLLISVVELASQGLVLGFASG*RAWRPS Trigger: TGATGGCCGCCACGCCCGCCAGCCTGAAGCGAAGCC...GAGAACGAGTCCCTGAGAAGCAAGCTCGACCACGCTAATAAGGAGAACTCCGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCATGGTCTCCATCTCTTTAGCATGAGCAGACCGCTCAGAGTCCTGTTTACTTCAGGCTGGCGGGCGTaGCGGCCATCACTCGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LHGLHLFSMSRPLRVLFTSGWRA*RPSLAS Trigger: TGAGGCGAGTGATGGCCGCCACGCCCGCCAGCCTGA...AGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGGTGGGATGCTATGGCGGTCTCCAGTTTGGACTTCCATAGAGCTATCACTGTCCGGCTGGGTTTaGTGCTCACAGAGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PAGGMLWRSPVWTSIELSLSGWV*CSQRRP Trigger: TGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAG...TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTTTCTGAGACGGTAGCCACCCTAGTGTCTTCTAACTCCCTCTGGAGTTTGGCCAGGGCTAGCTCCTaGTCTATTTCCCCCACGTGG | + |
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Preference number: 2 (lower is better) Translates to: DFSETVATLVSSNSLWSLARASS*SISPTW Trigger: CCACGTGGGGGAAATAGAGCAGGAGCTAGCCCTGGC...CAAACTCCAGAGGGAGTTAGAAGACACTAGGGTGGCTACCGTCTCAGAAAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCAAGTATTGTCAAGCCTaGAAAAAGGCCCTCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: DSWNLTAETTAEPILGPVKYCQA*KKALLR Trigger: TCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR-3UTR TCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCACTTACGAGGGGAAATaGAAGGGAAACTTGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: DSWNLTAETTAEPILGPVTYEGK*KGNLLK Trigger: CTTCAACAAGTTTCCCTTTCATTTCCCCTCGTAAGT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGCTACTTCCTGTGCTCTCAATGCTAGGTCCTTTTCTAGTTCCATTATTCTGGTGCCCGAGATCTTaGGGGCGTAGCGGGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: AQLLPVLSMLGPFLVPLFWCPRS*GRSGRR Trigger: CCTCCTCCCGCTACGCCCGCAAGATCTCGGGCACCA...GAATAATGGAACTAGAAAAGGACCTAGCATTGAGAGCACAGGAAGTAGCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCACTGAGCTCCTCCATTGCCTaGTGGTGGGATGCTATGGCG | + |
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Preference number: 2 (lower is better) Translates to: CSLFSVSSISTRCWSSALSSSIA*WWDAMA Trigger: CGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCT...CAGTGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTAATCTCCGCCTCCTGCAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGGGCTTTGGCTTTGGCTaGGGTAGTAGACGGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TLISASCSLFSVSSISTRGFGFG*GSRREA Trigger: GGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCC...CCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CAA 90 bp | AGCTCCTCCATTGCCTGCTGGTGGGATGCTATGGCGGTCTCCAGTTaGGACTTCCATAGAGCTATCACATCGGAGTTCTCCTTATTAGCG | + |
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Preference number: 2 (lower is better) Translates to: SSSIACWWDAMAVSS*DFHRAITSEFSLLA Trigger: CGCTAATAAGGAGAACTCCGATGTGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGGTCTCCATCTCTTTAGCATGAGCAGACCGCTCAGAGTCCTGTTTACTTGCCTGCTGGTGGGATaGTATGGCGGTCTCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LHGLHLFSMSRPLRVLFTCLLVG*YGGLQF Trigger: AAACTGGAGACCGCCATAGCATCCCACCAGCAGGCA...AGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCACTGATAGTCCTGTCCGGCTaGGTTTGCTGCTCACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CSLFSVSSISTRCWSSALIVLSG*VCCSQR Trigger: CCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTAT...CAGTGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR TCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGAATAAGGAGCTCTTCTaGAGTTGCACACCAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: DKDDSWNLTAETTAEPILNKELF*SCTPML Trigger: CAGCATTGGTGTGCAACTTCAGAAGAGCTCCTTATT...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR-3UTR TCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATACTTACGAGGGGAAATaGAAGGGAAACTTGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDTYEGK*KGNLLK Trigger: CTTCAACAAGTTTCCCTTTCATTTCCCCTCGTAAGT...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGGCCTTTGTAAGCTTGAGCTGGAGTTCTTCCACGGATCTTTCCTTCAGACGCCGTGTGCAGAGCCTTaGTCTCCTTCTGAAACGCCT | + |
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Preference number: 2 (lower is better) Translates to: IGLCKLELEFFHGSFLQTPCAEP*SPSETP Trigger: AGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGG...CGTCTGAAGGAAAGATCCGTGGAAGAACTCCAGCTCAAGCTTACAAAGGCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGAAGTATTGTCAAGCCTaGAAAAAGGCCCTCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: DKDDSWNLTAETTAEPILKYCQA*KKALLR Trigger: TCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTT...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTTAATCTCCGCCTCCTGCAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGCCCCAGGAGGTTTACTaGACTCTAGCCTTCTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: TLISASCSLFSVSSISTRPQEVY*TLAFFG Trigger: TCCGAAGAAGGCTAGAGTCCAGTAAACCTCCTGGGG...CCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCTCTCTATCTGTGTCTTTAACTCAGCAAATTCAGCGGAGTCCGTTCCATCCATTGCCTGCTGGTaGGATGCTATGGCGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LSLSICVFNSANSAESVPSIACW*DAMAVS Trigger: GGAGACCGCCATAGCATCCCACCAGCAGGCAATGGA...TGGAACGGACTCCGCTGAATTTGCTGAGTTAAAGACACAGATAGAGAGACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CAA 90 bp | CATAGAGCTATCACATCGGAGTTCTCCTTATTAGCGTGGTCGAGCTaGCTTCTCAGGGACTCGTTCTCTTTGGAAAGCTTCTCAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HRAITSEFSLLAWSS*LLRDSFSLESFSVA Trigger: GGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCCTGAGAAGCAAGCTCGACCACGCTAATAAGGAGAACTCCGATGTGATAGCTCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CAA 90 bp | TGCAGAACCTCTAGCTCCTTTACCTTAATCTCCGCCTCCTGCAGTTaGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CRTSSSFTLISASCS*FSVSSISTRCWSSA Trigger: TGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGGTAAAGGAGCTAGAGGTTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTAATAAGGAGCTCTTCTaGAGTTGCACACCAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCNKELF*SCTPML Trigger: CAGCATTGGTGTGCAACTTCAGAAGAGCTCCTTATT...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTACCTTCGGAATTGGCTTTCCGAAGCGCATCAAGATCCAAGAGCTTTTCTCCTCTTCCAGCTGGTTaGGCAGCTCCACTTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLPSELAFRSASRSKSFSPLPAG*AAPLSP Trigger: GGGAGAAAGTGGAGCTGCTCAACCAGCTGGAAGAGG...AGAAAAGCTCTTGGATCTTGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTAAACAAGGACGGAAGTaGAAGCCCACCTACCAAATA | + |
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Preference number: 2 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCKQGRK*KPTYQI Trigger: TATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTT...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGCTACTTCCTGTGCTCTCAATGCTAGGTCCTTTTCTAGTTCCATTATTCCACACCACTCCCCCTTaGCAAAGTCGGTCTCGCCAA | + |
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Preference number: 2 (lower is better) Translates to: AQLLPVLSMLGPFLVPLFHTTPP*QSRSRQ Trigger: TTGGCGAGACCGACTTTGCCAAGGGGGAGTGGTGTG...GAATAATGGAACTAGAAAAGGACCTAGCATTGAGAGCACAGGAAGTAGCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTGGTGGGATGCTATGGCGGTCTCCAGTTTGGACTTCCATAGAGCTATCATCTTCTAACTCCCTCTaGAGTTTGTCAGCTTTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PAGGMLWRSPVWTSIELSSSNSL*SLSALV Trigger: GACCAAAGCTGACAAACTCCAGAGGGAGTTAGAAGA...TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAATACTCTTCTGCAGAAAACTGGCGTTTTCATTGGCCTTTGTAAGCTTGAGCTCCTCCATTGCCTGCTaGTGGGATGCTATGGCGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PILFCRKLAFSLAFVSLSSSIAC*WDAMAV Trigger: GACCGCCATAGCATCCCACCAGCAGGCAATGGAGGA...GCTCAAGCTTACAAAGGCCAATGAAAACGCCAGTTTTCTGCAGAAGAGTATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGTCTGAGCAGAGACCGCCTCCTCTGAAGTACTGGCAAACTTTTCTTTCATCTTCAACTCGGAACTaGAGGTCCTCAACCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SLSEQRPPPLKYWQTFLSSSTRN*RSSTFL Trigger: GAGGAAGGTTGAGGACCTTCAGTTCCGAGTTGAAGA...TGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGAACAGGAACTGTGCCTaGTACAATGTCTTAAACCTT | + |
|
Preference number: 2 (lower is better) Translates to: DKDDSWNLTAETTAEPILNRNCA*YNVLNL Trigger: AAGGTTTAAGACATTGTACCAGGCACAGTTCCTGTT...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGACAGCACTGAGCTGCGATGTAAAATTACCAATGACCTCGCTTTGTTCAGTTCTATTTCCCCCACGTaGCTGGTAGCCTTGGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: FDSTELRCKITNDLALFSSISPT*LVALAT Trigger: GGTGGCCAAGGCTACCAGCCACGTGGGGGAAATAGA...ACTGAACAAAGCGAGGTCATTGGTAATTTTACATCGCAGCTCAGTGCTGTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCACTGCCCTGGTGGTCAGTATaGATGGCTTCTAGCTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CSLFSVSSISTRCWSSALPWWSV*MASSFS Trigger: AGAAAAGCTAGAAGCCATCCATACTGACCACCAGGG...CAGTGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCATGGTCTCCATCTCTTTAGCATGAGCAGACCGCTCAGAGTCCTGTTTACTTGGCGGTCTCCAGTTTaGACTTCCATAGAGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: LHGLHLFSMSRPLRVLFTWRSPV*TSIELS Trigger: TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCA...AGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAATACTCTTCTGCAGAAAACTGGCGTTTTCATTGGCCTTTGTAAGCTTGAGCGCTGGTGGGATGCTATaGCGGTCTCCAGTTTGGACT | + |
|
Preference number: 2 (lower is better) Translates to: PILFCRKLAFSLAFVSLSAGGML*RSPVWT Trigger: AGTCCAAACTGGAGACCGCCATAGCATCCCACCAGC...GCTCAAGCTTACAAAGGCCAATGAAAACGCCAGTTTTCTGCAGAAGAGTATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTACCTTCGGAATTGGCTTTCCGAAGCGCATCAAGATCCAAGAGCTTTTCTTCCATCTCTTTAGCATaGGCAGACCGCTCAGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SLPSELAFRSASRSKSFSSISLA*ADRSES Trigger: GGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGA...AGAAAAGCTCTTGGATCTTGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTACCTTCGGAATTGGCTTTCCGAAGCGCATCAAGATCCAAGAGCTTTTCTTCCTTAGTGCGGGCATaGTCCAGTTTGGTCTGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: SLPSELAFRSASRSKSFSSLVRA*SSLVCV Trigger: TACGCAGACCAAACTGGAGCATGCCCGCACTAAGGA...AGAAAAGCTCTTGGATCTTGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 90 bp | TCAAGCTGCTGTCTAAGTGTCTCGAGCTCCAGTTTACCTTCGGAATaGGCTTTCCGAAGCGCATCAAGATCCAAGAGCTTTTCTTTGACA | + |
|
Preference number: 2 (lower is better) Translates to: SSCCLSVSSSSLPSE*AFRSASRSKSFSLT Trigger: TGTCAAAGAAAAGCTCTTGGATCTTGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAACTGGAGCTCGAGACACTTAGACAGCAGCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 90 bp | AGAGTCACTTCGCCAATACTCTTCTGCAGAAAACTGGCGTTTTCATaGGCCTTTGTAAGCTTGAGCTGGAGTTCTTCCACGGATCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RVTSPILFCRKLAFS*AFVSLSWSSSTDLS Trigger: GGAAAGATCCGTGGAAGAACTCCAGCTCAAGCTTACAAAGGCCAATGAAAACGCCAGTTTTCTGCAGAAGAGTATTGGCGAAGTGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCATGGTCTCCATCTCTTTAGCATGAGCAGACCGCTCAGAGTCCTGTTTACTATCTTTGTCACTTTGTaGACAGGAGCGAACAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: LHGLHLFSMSRPLRVLFTIFVTL*TGANNP Trigger: TGGATTGTTCGCTCCTGTCCACAAAGTGACAAAGAT...AGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGTCTGAGCAGAGACCGCCTCCTCTGAAGTACTGGCAAACTTTTCTTTCAGGTGGTCAGTATGGATaGCTTCTAGCTTTTCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLSEQRPPPLKYWQTFLSGGQYG*LLAFLA Trigger: TGCAAGAAAAGCTAGAAGCCATCCATACTGACCACC...TGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 90 bp | TCGGAATTGGCTTTCCGAAGCGCATCAAGATCCAAGAGCTTTTCTTaGACAGCACTGAGCTGCGATGTAAAATTACCAATGACCTCGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SELAFRSASRSKSFS*TALSCDVKLPMTSL Trigger: AAGCGAGGTCATTGGTAATTTTACATCGCAGCTCAGTGCTGTCAAAGAAAAGCTCTTGGATCTTGATGCGCTTCGGAAAGCCAATTCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR TCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCAATAAGGAGCTCTTCTaGAGTTGCACACCAATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFNKELF*SCTPML Trigger: CAGCATTGGTGTGCAACTTCAGAAGAGCTCCTTATT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCAAACAAGGACGGAAGTaGAAGCCCACCTACCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFKQGRK*KPTYQI Trigger: TATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCAAGAGTGGCTTAGTTTaGTGCTGGGGTTATCTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFKSGLV*CWGYLL Trigger: TAGCAGATAACCCCAGCAGCAAACTAAGCCACTCTT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCTTTAAGAGTCACTTCGCCAATACTCTTCTGCAGAAAACTGGCGTTTTCATCCATTTCCACTAGGTaGTGGTCTTCTGCACTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SALRVTSPILFCRKLAFSSISTR*WSSALS Trigger: GGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGA...TGAAAACGCCAGTTTTCTGCAGAAGAGTATTGGCGAAGTGACTCTTAAAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCGGAGTTCTCCTTATTAGCGTGGTCGAGCTTGCTTCTCAGGGACTCGTTCTCCGAACAATCCATATTTaGGTTGACACTGAAAATACC | + |
|
Preference number: 2 (lower is better) Translates to: IGVLLISVVELASQGLVLRTIHI*VDTENT Trigger: GGTATTTTCAGTGTCAACCCAAATATGGATTGTTCG...GAGAACGAGTCCCTGAGAAGCAAGCTCGACCACGCTAATAAGGAGAACTCCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCACTGAGCTGCGATGTAAAATTACCAATGACCTCGCTTTGTTCAGTGTACTTGTAGCTGGTCCATCTTaGCCTCTAGTTCCAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: STELRCKITNDLALFSVLVAGPS*PLVPGH Trigger: ATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTAC...AAGTACACTGAACAAAGCGAGGTCATTGGTAATTTTACATCGCAGCTCAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 90 bp | CAACTTCTCCAGTTCAGACGACAACACGTTAAACTGTTCCTCCTTTaGGTGCAGTTTATTTACGGTATCTTGCATCCTTGTCTGAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: QLLQFRRQHVKLFLL*VQFIYGILHPCLSR Trigger: TCTGCTCAGACAAGGATGCAAGATACCGTAAATAAACTGCACCAAAAGGAGGAACAGTTTAACGTGTTGTCGTCTGAACTGGAGAAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 90 bp | ATACTCTTCTGCAGAAAACTGGCGTTTTCATTGGCCTTTGTAAGCTaGAGCTGGAGTTCTTCCACGGATCTTTCCTTCAGACGTAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: ILFCRKLAFSLAFVS*SWSSSTDLSFRRNS Trigger: TGAATTACGTCTGAAGGAAAGATCCGTGGAAGAACTCCAGCTCAAGCTTACAAAGGCCAATGAAAACGCCAGTTTTCTGCAGAAGAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACACTTACGAGGGGAAATaGAAGGGAAACTTGTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNTYEGK*KGNLLK Trigger: CTTCAACAAGTTTCCCTTTCATTTCCCCTCGTAAGT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCACTTACGAGGGGAAATaGAAGGGAAACTTGTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VLNLKNPENKDGSASPPTTYEGK*KGNLLK Trigger: CTTCAACAAGTTTCCCTTTCATTTCCCCTCGTAAGT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAAATAAGGAGCTCTTCTaGAGTTGCACACCAATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LNLKNPENKDGSASPPTKNKELF*SCTPML Trigger: CAGCATTGGTGTGCAACTTCAGAAGAGCTCCTTATT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCAACTCTTCAGTTGGTTaGGGTCCTTTGTTTTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFNSSVG*GPLFYL Trigger: AAGATAAAACAAAGGACCTCAACCAACTGAAGAGTT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCAGCTACTTCCTGTGCTCTCAATGCTAGGTCCTTTTCTAGTTCCATTATTCATCGCCTTTGGTAATTaGTTCTTCTTCAACTCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: AQLLPVLSMLGPFLVPLFIAFGN*FFFNSE Trigger: TTCCGAGTTGAAGAAGAATCAATTACCAAAGGCGAT...GAATAATGGAACTAGAAAAGGACCTAGCATTGAGAGCACAGGAAGTAGCTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 90 bp | GTTCTTCCACGGATCTTTCCTTCAGACGTAATTCATCATTCATCTTaGTCAGCTGAGAAGAGTTATCTCCTGACATCTTCATTATTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VLPRIFPSDVIHHSS*SAEKSYLLTSSLFL Trigger: CAGAAATAATGAAGATGTCAGGAGATAACTCTTCTCAGCTGACAAAGATGAATGATGAATTACGTCTGAAGGAAAGATCCGTGGAAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGAATAAGGAGCTCTTCTaGAGTTGCACACCAATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QQQPKYTDVARKHFSANMNKELF*SCTPML Trigger: CAGCATTGGTGTGCAACTTCAGAAGAGCTCCTTATT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGAAACAAGGACGGAAGTaGAAGCCCACCTACCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: QQQPKYTDVARKHFSANMKQGRK*KPTYQI Trigger: TATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGAAACAAGGACGGAAGTaGAAGCCCACCTACCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMKQGRK*KPTYQI Trigger: TATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGAACAGGAACTGTGCCTaGTACAATGTCTTAAACCTT | + |
|
Preference number: 2 (lower is better) Translates to: QQQPKYTDVARKHFSANMNRNCA*YNVLNL Trigger: AAGGTTTAAGACATTGTACCAGGCACAGTTCCTGTT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CCA 72 bp | AGGAGGCAGAAGGGCTTCGCTTCAGGCTGGCGGGCGTaGCGGCCATCACTCGCCTCACAGCGGCGGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RRQKGFASGWRA*RPSLASQRRLW Trigger: CCAAAGCCGCCGCTGTGAGGCGAGTGATGGCCGCCACGCCCGCCAGCCTGAAGCGAAGCCCTTCTGCCTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR GCA 72 bp | TGCTGGTCATGCCCATCTCGGGCCAGGGCTAGCTCCTaGTCTATTTCCCCCACGTGGCTGGTAGCCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CWSCPSRARASS*SISPTWLVALA Trigger: GGCCAAGGCTACCAGCCACGTGGGGGAAATAGAGCAGGAGCTAGCCCTGGCCCGAGATGGGCATGACCAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR TCA 72 bp | CTTCTGAAGTTGCACACCAATGCTGGCGGGAGCTGCTaGGGAGCCGGCGTTTGTCGGGGAAGCCCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLKLHTNAGGSC*GAGVCRGSPSC Trigger: GCAGGAAGGGCTTCCCCGACAAACGCCGGCTCCTCAGCAGCTCCCGCCAGCATTGGTGTGCAACTTCAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CCA 72 bp | AGCGGGAGGAGGTTTCAGTCAATAGTCCTGTCCGGCTaGGTTTGCTGCTCACAGAGGAGGCCACGGAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGRRFQSIVLSG*VCCSQRRPRSS Trigger: TGAGCTCCGTGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTATTGACTGAAACCTCCTCCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCTGAGGAGCCGGCGTTaGTCGGGGAAGCCCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KILPGSHLSQRVSLGTNRLRSRR*SGKPFL Trigger: CAGGAAGGGCTTCCCCGACAAACGCCGGCTCCTCAG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR GCA 72 bp | AGGAGGTTTCAGTCAATAGTCCTGTCCGGCTGGGTTTaGTGCTCACAGAGGAGGCCACGGAGCTCATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RRFQSIVLSGWV*CSQRRPRSSWS Trigger: GCTCCATGAGCTCCGTGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTATTGACTGAAACCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCACTGCCTGTCCGGCTGGGTTaGCTGCTCACAGAGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CSLFSVSSISTRCWSSALPVRLG*LLTEEA Trigger: GGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGG...CAGTGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | AAAATAAGGAGCTCTTCTGAAGTTGCACACCAATGCTaGCGGGAGCTGCTGAGGAGCCGGCGTTTGTCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KIRSSSEVAHQC*RELLRSRRLSG Trigger: CCCCGACAAACGCCGGCTCCTCAGCAGCTCCCGCCAGCATTGGTGTGCAACTTCAGAAGAGCTCCTTATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CCA 72 bp | TTCTCCCTGTCAGCAGCTTCCACCATGGTCCGTAGCTaGTCCATCTTGGCCTCTAGTTCCAGGACATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FSLSAASTMVRS*SILASSSRTCW Trigger: CCAGCATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | GCAGCTCCACTTTCTCCCTGTCAGCAGCTTCCACCATaGTCCGTAGCTGGTCCATCTTGGCCTCTAGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: AAPLSPCQQLPP*SVAGPSWPLVP Trigger: TGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGAAAGTGGAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR TCA 72 bp | CTTTGGAAAGCTTCTCAGTGGCCGTGTGCAGAGCCTTaGTCTCCTTCTGAAACGCCTCCTCTCGAGCTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LWKASQWPCAEP*SPSETPPLELR Trigger: TCGGAGCTCGAGAGGAGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGGCCACTGAGAAGCTTTCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | CATCACTCGCCTCACAGCGGCGGCTTTGGCTTTGGCTaGGGTAGTAGACGGGAAGCCAATCTTTGTCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: HHSPHSGGFGFG*GSRREANLCHF Trigger: AAAGTGACAAAGATTGGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAGGCGAGTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCAGGACATGCTGGTCATGCCCATCTCGGGCCAGGGCTAGCTCCTGCTCTCCAATCTTTGTCACTTaGTGGACAGGAGCGAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSRTCWSCPSRARASSCSPIFVT*WTGANN Trigger: ATTGTTCGCTCCTGTCCACAAAGTGACAAAGATTGG...AGAGCAGGAGCTAGCCCTGGCCCGAGATGGGCATGACCAGCATGTCCTGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | CTGGCTAAGAAACATCATGGAGACAAAGACGATAGCTaGAACCTCACAGCAGAGACCACCGCAGAGCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LAKKHHGDKDDS*NLTAETTAEPI Trigger: GATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTCTCCATGATGTTTCTTAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CCA 72 bp | GGGAGAGAGACATATCCACATCCCCAGGAGGTTTACTaGACTCTAGCCTTCTTCGGAGCTCAGCTACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRETYPHPQEVY*TLAFFGAQLLP Trigger: AGGAAGTAGCTGAGCTCCGAAGAAGGCTAGAGTCCAGTAAACCTCCTGGGGATGTGGATATGTCTCTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | TTGCCTGCTGGTGGGATGCTATGGCGGTCTCCAGTTTaGACTTCCATAGAGCTATCACATCGGAGTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPAGGMLWRSPV*TSIELSHRSSP Trigger: AGGAGAACTCCGATGTGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTGGCCTTTGTAAGCTTGAGCTGGAGTTCTTCCACGGATCTTTCCTTCAGACGCGGGCATGCTCCAGTTaGGTCTGCGTATTCTCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IGLCKLELEFFHGSFLQTRACSS*VCVFSG Trigger: TCCCGAGAATACGCAGACCAAACTGGAGCATGCCCG...CGTCTGAAGGAAAGATCCGTGGAAGAACTCCAGCTCAAGCTTACAAAGGCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGACTTCCATAGAGCTATCACATCGGAGTTCTCCTTATTAGCGTGGTCGAGCCGTAGCTGGTCCATCTaGGCCTCTAGTTCCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LDFHRAITSEFSLLAWSSRSWSI*ASSSRT Trigger: TGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACG...GCTCGACCACGCTAATAAGGAGAACTCCGATGTGATAGCTCTATGGAAGTCCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR GCA 72 bp | TGCAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTaGTGGTCTTCTGCACTGTCCAGTCTCGCTTTGACG | + |
|
Preference number: 3 (lower is better) Translates to: CSLFSVSSISTR*WSSALSSLALT Trigger: CGTCAAAGCGAGACTGGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCATGGTCTCCATCTCTTTAGCATGAGCAGACCGCTCAGAGTCCTGTTTACTACGGGAAGCCAATCTTaGTCACTTTGTGGACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHGLHLFSMSRPLRVLFTTGSQS*SLCGQE Trigger: CTCCTGTCCACAAAGTGACAAAGATTGGCTTCCCGT...AGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCATGGTCTCCATCTCTTTAGCATGAGCAGACCGCTCAGAGTCCTGTTTACTATGGCGGTCTCCAGTTaGGACTTCCATAGAGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: LHGLHLFSMSRPLRVLFTMAVSS*DFHRAI Trigger: GATAGCTCTATGGAAGTCCAAACTGGAGACCGCCAT...AGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | GCTCCGAAGTGTTCCTTCAAAGAAGTCATCTCGCCCTaGTGGTCAGTATGGATGGCTTCTAGCTTTTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: APKCSFKEVISP*WSVWMASSFSC Trigger: GCAAGAAAAGCTAGAAGCCATCCATACTGACCACCAGGGCGAGATGACTTCTTTGAAGGAACACTTCGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCTGAGGAGCCGGCGTTaGTCGGGGAAGCCCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SRKQGRKCKPTYQIFIIILRSRR*SGKPFL Trigger: CAGGAAGGGCTTCCCCGACAAACGCCGGCTCCTCAG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTCAGGGACTCGTTCTCTTTGGAAAGCTTCTCAGTGGCCGTGTGCAGAGCCCAAAGCACTTATTTCTaGCAAAAGGGAGAGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: LLRDSFSLESFSVAVCRAQSTYF*QKGERH Trigger: ATGTCTCTCTCCCTTTTGCAAGAAATAAGTGCTTTG...GGCTCTGCACACGGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCCTGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTGTCTGAGCAGAGACCGCCTCCTCTGAAGTACTGGCAAACTTTTCTTTCACTTTGTTCAGTGTACTaGGCCTGCAGAACCTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSEQRPPPLKYWQTFLSLCSVY*ACRTSS Trigger: GCTAGAGGTTCTGCAGGCCAAGTACACTGAACAAAG...TGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR TCA 72 bp | ATCAGCTTGGCCTGCATGGTCTCCATCTCTTTAGCATaGGCAGACCGCTCAGAGTCCTGTTTACTCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ISLACMVSISLA*ADRSESCLLCK Trigger: TTTACAGAGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAGGCCAAGCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR TCA 72 bp | TGGTGCAGTTTATTTACGGTATCTTGCATCCTTGTCTaGGCAGAGACCGCCTCCTCTGAAGTACTGGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WCSLFTVSCILV*AETASSEVLAN Trigger: GTTTGCCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGATGCAAGATACCGTAAATAAACTGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR GCA 72 bp | AGAACCTCTAGCTCCTTTACCTTAATCTCCGCCTCCTaGAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTSSSFTLISAS*SLFSVSSISTR Trigger: CCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGGTAAAGGAGCTAGAGGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR GCA 72 bp | TTACCAATGACCTCGCTTTGTTCAGTGTACTTGGCCTaGAGAACCTCTAGCTCCTTTACCTTAATCTCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPMTSLCSVYLA*RTSSSFTLISA Trigger: GGCGGAGATTAAGGTAAAGGAGCTAGAGGTTCTGCAGGCCAAGTACACTGAACAAAGCGAGGTCATTGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | AAGGAGCCGGAGACTGTTCTTCCAGCTACTCCGATCTaGCTAAGAAACATCATGGAGACAAAGACGATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KEPETVLPATPI*LRNIMETKTIA Trigger: AGCTATCGTCTTTGTCTCCATGATGTTTCTTAGCCAGATCGGAGTAGCTGGAAGAACAGTCTCCGGCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CCA 72 bp | CATAGAGCTATCACATCGGAGTTCTCCTTATTAGCGTaGTCGAGCTTGCTTCTCAGGGACTCGTTCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HRAITSEFSLLA*SSLLLRDSFSL Trigger: CAAAGAGAACGAGTCCCTGAGAAGCAAGCTCGACCACGCTAATAAGGAGAACTCCGATGTGATAGCTCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | CTGTCCTGCAGACCAGTGAGCACTAGCTCTTTCTCCTaGAGCTCTTTGGTAATGCTATTAGCCTTGCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: LSCRPVSTSSFS*SSLVMLLALLL Trigger: AAGTAGCAAGGCTAATAGCATTACCAAAGAGCTCCAGGAGAAAGAGCTAGTGCTCACTGGTCTGCAGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCTGAGGAGCCGGCGTTaGTCGGGGAAGCCCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QQQPKYTDVARKHFSANMLRSRR*SGKPFL Trigger: CAGGAAGGGCTTCCCCGACAAACGCCGGCTCCTCAG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCTGAGGAGCCGGCGTTaGTCGGGGAAGCCCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMLRSRR*SGKPFL Trigger: CAGGAAGGGCTTCCCCGACAAACGCCGGCTCCTCAG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTTGCCTTTACCAGCTGATCTTCTCGATCATCCTTCTCTTTAAATTTTGCCTCACAGCGGCGGCTTaGGCTTTGGCTGGGGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLCLYQLIFSIILLFKFCLTAAA*ALAGVV Trigger: TACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAG...GCAAAATTTAAAGAGAAGGATGATCGAGAAGATCAGCTGGTAAAGGCAAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAGCTACTTCCTGTGCTCTCAATGCTAGGTCCTTTTCTAGTTCCATTATTCAGAAATCGGGCTCTTTaGCTCAAGATCGCCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: AQLLPVLSMLGPFLVPLFRNRAL*LKIAFG Trigger: ACCAAAGGCGATCTTGAGCAAAAGAGCCCGATTTCT...GAATAATGGAACTAGAAAAGGACCTAGCATTGAGAGCACAGGAAGTAGCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGGGAGCTCTTCTGAAGTaGCACACCAATGCTGGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: QQQPKYTDVARKHFSANMGALLK*HTNAGG Trigger: CCCGCCAGCATTGGTGTGCAACTTCAGAAGAGCTCC...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR TCA 72 bp | AATCGGGCTCTTTTGCTCAAGATCGCCTTTGGTAATTaGTTCTTCTTCAACTCGGAACTGAAGGTCCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NRALLLKIAFGN*FFFNSELKVLN Trigger: GTTGAGGACCTTCAGTTCCGAGTTGAAGAAGAATCAATTACCAAAGGCGATCTTGAGCAAAAGAGCCCGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR GCA 72 bp | TCTAAGTTTTTAATCTGCTTTTCAGCTCCCTCAAGCTaGTGTCTAAGTGTCTCGAGCTCCAGTTTACCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: SKFLICFSAPSS*CLSVSSSSLPS Trigger: CGAAGGTAAACTGGAGCTCGAGACACTTAGACAGCAGCTTGAGGGAGCTGAAAAGCAGATTAAAAACTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR GCA 72 bp | TGCTCAGCTTTAAGAGTCACTTCGCCAATACTCTTCTaGAGAAAACTGGCGTTTTCATTGGCCTTTGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: CSALRVTSPILF*RKLAFSLAFVS Trigger: GCTTACAAAGGCCAATGAAAACGCCAGTTTTCTGCAGAAGAGTATTGGCGAAGTGACTCTTAAAGCTGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | TCCTTGTCTGAGCAGAGACCGCCTCCTCTGAAGTACTaGCAAACTTTTCTTTCAAAGTCTGAAGTTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLSEQRPPPLKY*QTFLSKSEVLS Trigger: AGAAAGAACTTCAGACTTTGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | AAACTGGCGTTTTCATTGGCCTTTGTAAGCTTGAGCTaGAGTTCTTCCACGGATCTTTCCTTCAGACGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: KLAFSLAFVSLS*SSSTDLSFRRN Trigger: ATTACGTCTGAAGGAAAGATCCGTGGAAGAACTCCAGCTCAAGCTTACAAAGGCCAATGAAAACGCCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | AGTTCAGACGACAACACGTTAAACTGTTCCTCCTTTTaGTGCAGTTTATTTACGGTATCTTGCATCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSDDNTLNCSSF*CSLFTVSCILV Trigger: GACAAGGATGCAAGATACCGTAAATAAACTGCACCAAAAGGAGGAACAGTTTAACGTGTTGTCGTCTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACAGCACTGAGCTGCGATGTAAAATTACCAATGACCTCGCTTTGTTCAGTCAATCCATATTTGGGTaGACACTGAAAATACCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FDSTELRCKITNDLALFSQSIFG*TLKIPC Trigger: ACAAGGTATTTTCAGTGTCAACCCAAATATGGATTG...ACTGAACAAAGCGAGGTCATTGGTAATTTTACATCGCAGCTCAGTGCTGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CCA 72 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTaGTACAATGTCTTAAACCTTAAAAATCCAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QRVSLGTNRNCA*YNVLNLKNPEN Trigger: GTTTTCTGGATTTTTAAGGTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR TCA 72 bp | TCCTTCAGACGTAATTCATCATTCATCTTTGTCAGCTaGGAAGAGTTATCTCCTGACATCTTCATTATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SFRRNSSFIFVS*EELSPDIFIIS Trigger: AGAAATAATGAAGATGTCAGGAGATAACTCTTCTCAGCTGACAAAGATGAATGATGAATTACGTCTGAAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 72 bp | GGCGTGGCGGCCATCACTCGCCTCACAGCGGCGGCTTaGGCTTTGGCTGGGGTAGTAGACGGGAAGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: GVAAITRLTAAA*ALAGVVDGKPI Trigger: GATTGGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAGGCGAGTGATGGCCGCCACGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR GCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCTGTCCGGCTGGGTTTaGTGCTCACAGAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVLSGWV*CSQRRP Trigger: TGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CAA 72 bp | GCGGCCATCACTCGCCTCACAGCGGCGGCTTTGGCTTaGGCTGGGGTAGTAGACGGGAAGCCAATCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAITRLTAAALA*AGVVDGKPIFV Trigger: GACAAAGATTGGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAGGCGAGTGATGGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCAGCAGTGGACAGAGGTaGAGCAGTTCTCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVSSGQR*SSSPRS Trigger: GCTCCTGGGAGAACTGCTTCACCTCTGTCCACTGCT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCAGCTCCTCCATTGCCTaGTGGTGGGATGCTATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVSSSIA*WWDAMA Trigger: CGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCACACCACTCCCCCTTaGCAAAGTCGGTCTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVHTTPP*QSRSRQ Trigger: TTGGCGAGACCGACTTTGCCAAGGGGGAGTGGTGTG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTCAGGCTGGCGGGCGTaGCGGCCATCACTCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCSGWRA*RPSLAS Trigger: TGAGGCGAGTGATGGCCGCCACGCCCGCCAGCCTGA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGGGCTTCGCTTCAGGCTaGCGGGCGTGGCGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKGFASG*RAWRPS Trigger: TGATGGCCGCCACGCCCGCCAGCCTGAAGCGAAGCC...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCCCTGTCTCCGACCTTaGGCTCCCGCTCCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKPCLRP*APAPPS Trigger: AGAAGGGGGAGCGGGAGCTCAAGGTCGGAGACAGGG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCTCTTCCAGCTTCTGGTaGCTTGTGACTTCGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVSSSFW*LVTSSR Trigger: CCGGGACGAAGTCACAAGTCACCAGAAGCTGGAAGA...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATGGTGCCCGAGATCTTaGGGGCGTAGCGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLWCPRS*GRSGRR Trigger: CCTCCTCCCGCTACGCCCGCAAGATCTCGGGCACCA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATGCCAGGGCTAGCTCCTaGTCTATTTCCCCCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDARASS*SISPTW Trigger: CCACGTGGGGGAAATAGAGCAGGAGCTAGCCCTGGC...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCAGGTCTCGTCGTCATTaGAGTTGGTTGCCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVRSRRH*SWLPSA Trigger: GGCACTGGGCAACCAACTGCAATGACGACGAGACCT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCAGGCTGGCGGGCGTaGCGGCCATCACTCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSGWRA*RPSLAS Trigger: TGAGGCGAGTGATGGCCGCCACGCCCGCCAGCCTGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATAGCAGTGGACAGAGGTaGAGCAGTTCTCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSSGQR*SSSPRS Trigger: GCTCCTGGGAGAACTGCTTCACCTCTGTCCACTGCT...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCCCTGTCTCCGACCTTaGGCTCCCGCTCCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRPCLRP*APAPPS Trigger: AGAAGGGGGAGCGGGAGCTCAAGGTCGGAGACAGGG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGTGTCCAGTCTCGCTTTaGCGGCCTCCAGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILCPVSL*RPPGCP Trigger: AGGACAGCCTGGAGGCCGTCAAAGCGAGACTGGACA...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCTGTCCGGCTGGGTTTaGTGCTCACAGAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILLSGWV*CSQRRP Trigger: TGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTGGTGCCCGAGATCTTaGGGGCGTAGCGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRWCPRS*GRSGRR Trigger: CCTCCTCCCGCTACGCCCGCAAGATCTCGGGCACCA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATAGCTCCTCCATTGCCTaGTGGTGGGATGCTATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSSSIA*WWDAMA Trigger: CGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCT...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATGTCTGCACAACTGAGTaGAGGGACTTGGCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDVCTTE*RDLAVA Trigger: TGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGAC...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCAGCCTCTGAAAGGTTaGAGATCGACTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVQPLKG*RSTHWQ Trigger: CTGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTCTATTTCCCCCACGTaGCTGGTAGCCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSISPT*LVALAT Trigger: GGTGGCCAAGGCTACCAGCCACGTGGGGGAAATAGA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCACATCTGTGCCTGGGTaGGACAGTCCTCTGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVTSVPG*DSPLYR Trigger: ACGATACAGAGGACTGTCCCACCCAGGCACAGATGT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CAA 72 bp | GAGGAGGTTTCAGTCAATAGTCCTGTCCGGCTGGGTTaGCTGCTCACAGAGGAGGCCACGGAGCTCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EEVSVNSPVRLG*LLTEEATELME Trigger: CTCCATGAGCTCCGTGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTATTGACTGAAACCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | TCATGCCCATCTCGGGCCAGGGCTAGCTCCTGCTCTATTTCCCCCACGTGGCTGTTTGTGGGGAATATTTaGGGGAGTGGCTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCPSRARASSCSISPTWLFVGNI*GSGWRR Trigger: TCTTCTCCAGCCACTCCCTCAAATATTCCCCACAAA...CAGCCACGTGGGGGAAATAGAGCAGGAGCTAGCCCTGGCCCGAGATGGGCATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCCCGCTCCCCCTTCTTaGCAGAGCCAGCCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCPAPPS*QSQPLK Trigger: TTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCGGG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCCTCTTCCAGCTGGTTaGGCAGCTCCACTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILPLPAG*AAPLSP Trigger: GGGAGAAAGTGGAGCTGCTCAACCAGCTGGAAGAGG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTGTCCAGTCTCGCTTTaGCGGCCTCCAGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCCPVSL*RPPGCP Trigger: AGGACAGCCTGGAGGCCGTCAAAGCGAGACTGGACA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCTCCGGCTGCCATGGTaGGTGGAATGGGGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCLRLPW*VEWGGS Trigger: AGATCCTCCCCATTCCACTCACCATGGCAGCCGGAG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCTGTCCGGCTGGGTTTaGTGCTCACAGAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCLSGWV*CSQRRP Trigger: TGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCAGGGCTAGCTCCTaGTCTATTTCCCCCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCARASS*SISPTW Trigger: CCACGTGGGGGAAATAGAGCAGGAGCTAGCCCTGGC...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCTCCATTTCCACTAGGTaGTGGTCTTCTGCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVSISTR*WSSALS Trigger: GGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGA...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGTCTGCACAACTGAGTaGAGGGACTTGGCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILVCTTE*RDLAVA Trigger: TGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGAC...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCCCGTTGCCATTGAGTaGAGCTTCAGACATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVPVAIE*SFRHHL Trigger: GAGATGATGTCTGAAGCTGCACTCAATGGCAACGGG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCTTTGGCTTTGGCTaGGGTAGTAGACGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILGFGFG*GSRREA Trigger: GGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCC...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAGGCTTCGCTTCAGGCTaGCGGGCGTGGCGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSGFASG*RAWRPS Trigger: TGATGGCCGCCACGCCCGCCAGCCTGAAGCGAAGCC...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGTCTATTTCCCCCACGTaGCTGGTAGCCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILSISPT*LVALAT Trigger: GGTGGCCAAGGCTACCAGCCACGTGGGGGAAATAGA...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATGCTGGTGGGATGCTATaGCGGTCTCCAGTTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDAGGML*RSPVWT Trigger: AGTCCAAACTGGAGACCGCCATAGCATCCCACCAGC...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCAGTCTGAGCAGCTTTaGCTTTGTCGGCCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVQSEQL*LCRPVF Trigger: AAACACAGGCCGACAAAGCCAAAGCTGCTCAGACTG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTCCATCTCTTTAGCATaGGCAGACCGCTCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSISLA*ADRSES Trigger: GGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCTGGCTGCTTGCTGCTaGCTCTGCTCAGCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDLAACC*LCSALR Trigger: TCTTAAAGCTGAGCAGAGTCAGCAGCAAGCAGCCAG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCTCCGGCTGCCATGGTaGGTGGAATGGGGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRLRLPW*VEWGGS Trigger: AGATCCTCCCCATTCCACTCACCATGGCAGCCGGAG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAGTTCTCCCAGGAGCTaGCTGCAGGCCGTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSSPRS*LQAVGF Trigger: GAAGCCAACGGCCTGCAGGCAGCTCCTGGGAGAACT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGCTCCTCCATTGCCTaGTGGTGGGATGCTATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKSSSIA*WWDAMA Trigger: CGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCATCTGTTCCATGATCTaGATGGCGTCTTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVICSMI*MASSAV Trigger: GACTGCAGAAGACGCCATGCAGATCATGGAACAGAT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTATTGTCTTCTCCACTaGAGCTGCAGCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDYCLLH*SCSSSR Trigger: CCTGCTGCTGCTGCAGCTCCAGTGGAGAAGACAATA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCTGCCTGCAGGCCGTTaGCTTCATCTTCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCLPAGR*LHLLPA Trigger: TGCAGGCAGAAGATGAAGCCAACGGCCTGCAGGCAG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCACACCACTCCCCCTTaGCAAAGTCGGTCTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKHTTPP*QSRSRQ Trigger: TTGGCGAGACCGACTTTGCCAAGGGGGAGTGGTGTG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCTCAGGCTGGCGGGCGTaGCGGCCATCACTCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFSGWRA*RPSLAS Trigger: TGAGGCGAGTGATGGCCGCCACGCCCGCCAGCCTGA...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGATAGTCCTGTCCGGCTaGGTTTGCTGCTCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILIVLSG*VCCSQR Trigger: CCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTAT...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCCCTGGTGGTCAGTATaGATGGCTTCTAGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVPWWSV*MASSFS Trigger: AGAAAAGCTAGAAGCCATCCATACTGACCACCAGGG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATGGGACTCGTTCTCTTTaGAAAGCTTCTCAGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDGTRSL*KASQWP Trigger: CGGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCC...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCTGGCGGTCTCCAGTTTaGACTTCCATAGAGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVWRSPV*TSIELS Trigger: TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCA...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTCCATTGCCTGCTGGTaGGATGCTATGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCSIACW*DAMAVS Trigger: GGAGACCGCCATAGCATCCCACCAGCAGGCAATGGA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATCCTCCATTGCCTGCTaGTGGGATGCTATGGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLSSIAC*WDAMAV Trigger: GACCGCCATAGCATCCCACCAGCAGGCAATGGAGGA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATACATCTGTGCCTGGGTaGGACAGTCCTCTGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDTSVPG*DSPLYR Trigger: ACGATACAGAGGACTGTCCCACCCAGGCACAGATGT...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGTGGCCTGGTGCGAACTaGGTTTCCCCAAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKWPGAN*VSPRNW Trigger: CCAGTTTCTTGGGGAAACTCAGTTCGCACCAGGCCA...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR TCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTCTTCAACTCGGAACTaGAGGTCCTCAACCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSSTRN*RSSTFL Trigger: GAGGAAGGTTGAGGACCTTCAGTTCCGAGTTGAAGA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTACCGTGTGCAGAGCCTTaGTCTCCTTCTGAAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLPCAEP*SPSETP Trigger: AGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGG...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCCGTGTGCAGAGCCTTaGTCTCCTTCTGAAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCPCAEP*SPSETP Trigger: AGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCTGGCTGCTTGCTGCTaGCTCTGCTCAGCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILLAACC*LCSALR Trigger: TCTTAAAGCTGAGCAGAGTCAGCAGCAAGCAGCCAG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGTCTCTGTTCGCCTCCTaGGCAGCCTTCAGCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKSLFAS*AAFSLS Trigger: GGATAAGCTGAAGGCTGCTCAGGAGGCGAACAGAGA...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTAGCATCAGTGTTACCTaGGGAGCTGCTGAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCSISVT*GAAELP Trigger: AGGCAGCTCAGCAGCTCCTCAGGTAACACTGATGCT...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGCATCAGTGTTACCTaGGGAGCTGCTGAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKSISVT*GAAELP Trigger: AGGCAGCTCAGCAGCTCCTCAGGTAACACTGATGCT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | GTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCACTGTCCAAGTTCTCCCAGGAGCTaGCTGCAGGCCGTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCLACPPFPLGAGLLHCPSSPRS*LQAVGF Trigger: GAAGCCAACGGCCTGCAGGCAGCTCCTGGGAGAACT...TGGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| CDS-3UTR GCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGTGCCTGCTGGTGGGATaGTATGGCGGTCTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKCLLVG*YGGLQF Trigger: AAACTGGAGACCGCCATAGCATCCCACCAGCAGGCA...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAGCTCCTCCATTGCCTaGTGGTGGGATGCTATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSSSIA*WWDAMA Trigger: CGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCAGTCTTGCATTTGTTTaGTTGGTGTCCTCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVSLAFV*LVSSKE Trigger: CTCCTTGGAGGACACCAAGCAAACAAATGCAAGACT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGGTCTGCACAACTGAGTaGAGGGACTTGGCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRVCTTE*RDLAVA Trigger: TGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGAC...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCGGTTTCTTCTTGGACTaGTTTTCCTGGTCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVGFFLD*FSWSSL Trigger: CAGTGATGACCAGGAAAAGCAGTCCAAGAAGAAACC...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTATCTTCCGACATCTGTaGCTGGGTGGGACAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCIFRHL*LGGTVL Trigger: GAGGACTGTCCCACCCAGGCACAGATGTCGGAAGAT...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTAATCTTCCGACATCTGTaGCTGGGTGGGACAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLIFRHL*LGGTVL Trigger: GAGGACTGTCCCACCCAGGCACAGATGTCGGAAGAT...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCAGTTGGTTGCCCAGTaGCCAAACATCTCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDQLVAQ*PNISQI Trigger: GATCTGTGAGATGTTTGGGCACTGGGCAACCAACTG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTAGGTCTCGTCGTCATTaGAGTTGGTTGCCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCRSRRH*SWLPSA Trigger: GGCACTGGGCAACCAACTGCAATGACGACGAGACCT...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATCCTTAGTGCGGGCATaGTCCAGTTTGGTCTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLSLVRA*SSLVCV Trigger: GACGCAGACCAAACTGGAGCATGCCCGCACTAAGGA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCTGCCTGCAGGCCGTTaGCTTCATCTTCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRLPAGR*LHLLPA Trigger: TGCAGGCAGAAGATGAAGCCAACGGCCTGCAGGCAG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | ATCGGAGTTCTCCTTATTAGCGTGGTCGAGCTTGCTTCTCAGGGACTCGTTCTCCTGCCTGCAGGCCGTTaGCTTCATCTTCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGVLLISVVELASQGLVLLPAGR*LHLLPA Trigger: TGCAGGCAGAAGATGAAGCCAACGGCCTGCAGGCAG...GAGAACGAGTCCCTGAGAAGCAAGCTCGACCACGCTAATAAGGAGAACTCCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACGGCTTCGCTTCAGGCTaGCGGGCGTGGCGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNGFASG*RAWRPS Trigger: TGATGGCCGCCACGCCCGCCAGCCTGAAGCGAAGCC...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGGCTGGTGGGATGCTATaGCGGTCTCCAGTTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKAGGML*RSPVWT Trigger: AGTCCAAACTGGAGACCGCCATAGCATCCCACCAGC...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCCTCCATTGCCTGCTaGTGGGATGCTATGGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSSIAC*WDAMAV Trigger: GACCGCCATAGCATCCCACCAGCAGGCAATGGAGGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCGTTTACCTTCGGAATTaGCTTTCCGAAGCGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVVYLRN*LSEAHQ Trigger: TTGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAAC...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATGGCGGGGTTTCTTCTTaGACTGCTTTTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDGGVSS*TAFPGH Trigger: ATGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCC...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCAGTCCTCTGTATCGTaGAGGTCAAAGCAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDQSSVS*RSKQSQ Trigger: CTGTGACTGCTTTGACCTCCACGATACAGAGGACTG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCGTCGTCATTGCAGTTaGTTGCCCAGTGCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILRRHCS*LPSAQT Trigger: TGTTTGGGCACTGGGCAACCAACTGCAATGACGACG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR CAA 72 bp | ACTAGGTGCTGGTCTTCTGCACTGTCCAGTCTCGCTTaGACGGCCTCCAGGCTGTCCTCCTTCTCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: TRCWSSALSSLA*TASRLSSFSLM Trigger: CATTAAAGAGAAGGAGGACAGCCTGGAGGCCGTCAAAGCGAGACTGGACAGTGCAGAAGACCAGCACCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCACTGTCCAAGCAGTGGACAGAGGTaGAGCAGTTCTCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCLACPPFPLGAGLLHCPSSGQR*SSSPRS Trigger: GCTCCTGGGAGAACTGCTTCACCTCTGTCCACTGCT...TGGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGTCCATCTCTTTAGCATaGGCAGACCGCTCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKSISLA*ADRSES Trigger: GGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGA...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATGTCCAGTCTCGCTTTaGCGGCCTCCAGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSCPVSL*RPPGCP Trigger: AGGACAGCCTGGAGGCCGTCAAAGCGAGACTGGACA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGAGAGACCGCCTCCTCTaGAGTACTGGCAAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILRDRLL*STGKLF Trigger: GAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCT...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCTTCATCTTTGTCAGCTaGGAAGAGTTATCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVFIFVS*EELSPD Trigger: GTCAGGAGATAACTCTTCTCAGCTGACAAAGATGAA...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGGCGTCTTCTGCAGTCTaGGCAGCTTTGGCTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRASSAV*AALALS Trigger: CGACAAAGCCAAAGCTGCTCAGACTGCAGAAGACGC...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGTGGTCATCTGTTCCATaGTCTGCATGGCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILWSSVP*SAWRLL Trigger: CAGAAGACGCCATGCAGATCATGGAACAGATGACCA...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCTTCCAGCTTCTGGTaGCTTGTGACTTCGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSSSFW*LVTSSR Trigger: CCGGGACGAAGTCACAAGTCACCAGAAGCTGGAAGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACTCCGGCTGCCATGGTaGGTGGAATGGGGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSLRLPW*VEWGGS Trigger: AGATCCTCCCCATTCCACTCACCATGGCAGCCGGAG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATGCTTCATCTTCTGCCTaGACCTTCCTCGTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDASSSA*TFLVSF Trigger: AAAGCTAACGAGGAAGGTGCAGGCAGAAGATGAAGC...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACTGTCCGGCTGGGTTTaGTGCTCACAGAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSLSGWV*CSQRRP Trigger: TGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTGCCTGCTGGTGGGATaGTATGGCGGTCTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRCLLVG*YGGLQF Trigger: AAACTGGAGACCGCCATAGCATCCCACCAGCAGGCA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTAGCTCCTCCATGTCCTaGATCAGATCTCTGTTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCSSSMS*IRSLFA Trigger: GGCGAACAGAGATCTGATGCAGGACATGGAGGAGCT...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGCTCCTCCATGTCCTaGATCAGATCTCTGTTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKSSSMS*IRSLFA Trigger: GGCGAACAGAGATCTGATGCAGGACATGGAGGAGCT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATATCTGTTCCATGATCTaGATGGCGTCTTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDICSMI*MASSAV Trigger: GACTGCAGAAGACGCCATGCAGATCATGGAACAGAT...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAGGTCTCGTCGTCATTaGAGTTGGTTGCCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRRSRRH*SWLPSA Trigger: GGCACTGGGCAACCAACTGCAATGACGACGAGACCT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCCTTAGTGCGGGCATaGTCCAGTTTGGTCTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSLVRA*SSLVCV Trigger: GACGCAGACCAAACTGGAGCATGCCCGCACTAAGGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGTATTGTCTTCTCCACTaGAGCTGCAGCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKYCLLH*SCSSSR Trigger: CCTGCTGCTGCTGCAGCTCCAGTGGAGAAGACAATA...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTCTTTTGCCGTTGACTaGGACGGTTTGTGGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSFAVD*DGLWGI Trigger: TATTCCCCACAAACCGTCCCAGTCAACGGCAAAAGA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCAGCCTCTGAAAGGTTaGAGATCGACTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCQPLKG*RSTHWQ Trigger: CTGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGATAGTCCTGTCCGGCTaGGTTTGCTGCTCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRIVLSG*VCCSQR Trigger: CCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTAT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGTAGCTGGTCCATCTTaGCCTCTAGTTCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILVAGPS*PLVPGH Trigger: ATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTAC...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCCCCAGGAGGTTTACTaGACTCTAGCCTTCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKPQEVY*TLAFFG Trigger: TCCGAAGAAGGCTAGAGTCCAGTAAACCTCCTGGGG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCCCCAGGAGGTTTACTaGACTCTAGCCTTCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCPQEVY*TLAFFG Trigger: TCCGAAGAAGGCTAGAGTCCAGTAAACCTCCTGGGG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCCCTGGTGGTCAGTATaGATGGCTTCTAGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDPWWSV*MASSFS Trigger: AGAAAAGCTAGAAGCCATCCATACTGACCACCAGGG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGGGACTCGTTCTCTTTaGAAAGCTTCTCAGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCGTRSL*KASQWP Trigger: CGGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCC...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTAGGGACTCGTTCTCTTTaGAAAGCTTCTCAGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLGTRSL*KASQWP Trigger: CGGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCC...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTGGCGGTCTCCAGTTTaGACTTCCATAGAGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDWRSPV*TSIELS Trigger: TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCGGGGTTTCTTCTTaGACTGCTTTTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILGGVSS*TAFPGH Trigger: ATGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCC...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCAGTCCTCTGTATCGTaGAGGTCAAAGCAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILQSSVS*RSKQSQ Trigger: CTGTGACTGCTTTGACCTCCACGATACAGAGGACTG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGGGGCATGCTCCAGTTTaGTCTGCGTCTCAAGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRGHAPV*SASQDR Trigger: GCGATCTTGAGACGCAGACCAAACTGGAGCATGCCC...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
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| 3UTR CAA 72 bp | CTCTGTTCAAGCTCCTTAGTGCGGGCATGCTCCAGTTaGGTCTGCGTATTCTCGGGATCTTCAGAAATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSSSLVRACSS*VCVFSGSSEIG Trigger: CCCGATTTCTGAAGATCCCGAGAATACGCAGACCAAACTGGAGCATGCCCGCACTAAGGAGCTTGAACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| 3UTR CAA 72 bp | ATTGCCTGCTGGTGGGATGCTATGGCGGTCTCCAGTTaGGACTTCCATAGAGCTATCACATCGGAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IACWWDAMAVSS*DFHRAITSEFS Trigger: GGAGAACTCCGATGTGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACCTCTTCCAGCTGGTTaGGCAGCTCCACTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSPLPAG*AAPLSP Trigger: GGGAGAAAGTGGAGCTGCTCAACCAGCTGGAAGAGG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCCATCTCTTTAGCATaGGCAGACCGCTCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSISLA*ADRSES Trigger: GGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCTGGCTGCTTGCTGCTaGCTCTGCTCAGCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRLAACC*LCSALR Trigger: TCTTAAAGCTGAGCAGAGTCAGCAGCAAGCAGCCAG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTGGTCATCTGTTCCATaGTCTGCATGGCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCWSSVP*SAWRLL Trigger: CAGAAGACGCCATGCAGATCATGGAACAGATGACCA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTCAGGGACTCGTTCTCTTTGGAAAGCTTCTCAGTGGCCGTGTGCAGAGCCGCTTCATCTTCTGCCTaGACCTTCCTCGTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRDSFSLESFSVAVCRAASSSA*TFLVSF Trigger: AAAGCTAACGAGGAAGGTGCAGGCAGAAGATGAAGC...GGCTCTGCACACGGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCCTGAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATCCATTTCCACTAGGTaGTGGTCTTCTGCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLSISTR*WSSALS Trigger: GGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCAGTTGGTTGCCCAGTaGCCAAACATCTCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCQLVAQ*PNISQI Trigger: GATCTGTGAGATGTTTGGGCACTGGGCAACCAACTG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCATCGTTCTTCCCTATaGGTTCATCTAAAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: DSWNLTAETTAEPILGPVHRSSL*VHLKQS Trigger: GGATTGTTTTAGATGAACCCATAGGGAAGAACGATG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCAGGCTGGCGGGCGTaGCGGCCATCACTCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKSGWRA*RPSLAS Trigger: TGAGGCGAGTGATGGCCGCCACGCCCGCCAGCCTGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATTCTCCTCTTCCAGCTaGTTGAGCAGCTCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLFSSSS*LSSSTF Trigger: GAAAGTGGAGCTGCTCAACCAGCTGGAAGAGGAGAA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATGGTGGTCAGTATGGATaGCTTCTAGCTTTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDGGQYG*LLAFLA Trigger: TGCAAGAAAAGCTAGAAGCCATCCATACTGACCACC...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGGGCGGGGTTTCTTCTTaGACTGCTTTTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKGGVSS*TAFPGH Trigger: ATGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCC...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCAGTCCTCTGTATCGTaGAGGTCAAAGCAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKQSSVS*RSKQSQ Trigger: CTGTGACTGCTTTGACCTCCACGATACAGAGGACTG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCGTCGTCATTGCAGTTaGTTGCCCAGTGCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRRRHCS*LPSAQT Trigger: TGTTTGGGCACTGGGCAACCAACTGCAATGACGACG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | ATTGGCCTTTGTAAGCTTGAGCTGGAGTTCTTCCACGGATCTTTCCTTCAGACGTGGCCTGGTGCGAACTaGGTTTCCCCAAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGLCKLELEFFHGSFLQTWPGAN*VSPRNW Trigger: CCAGTTTCTTGGGGAAACTCAGTTCGCACCAGGCCA...CGTCTGAAGGAAAGATCCGTGGAAGAACTCCAGCTCAAGCTTACAAAGGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACCCTGTCTCCGACCTTaGGCTCCCGCTCCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKPCLRP*APAPPS Trigger: AGAAGGGGGAGCGGGAGCTCAAGGTCGGAGACAGGG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCTTCAACTCGGAACTaGAGGTCCTCAACCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSSTRN*RSSTFL Trigger: GAGGAAGGTTGAGGACCTTCAGTTCCGAGTTGAAGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTGTCCAGTCTCGCTTTaGCGGCCTCCAGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNCPVSL*RPPGCP Trigger: AGGACAGCCTGGAGGCCGTCAAAGCGAGACTGGACA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAGAGACCGCCTCCTCTaGAGTACTGGCAAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRRDRLL*STGKLF Trigger: GAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTTCATCTTTGTCAGCTaGGAAGAGTTATCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDFIFVS*EELSPD Trigger: GTCAGGAGATAACTCTTCTCAGCTGACAAAGATGAA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATCTCTGTTCGCCTCCTaGGCAGCCTTCAGCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSSLFAS*AAFSLS Trigger: GGATAAGCTGAAGGCTGCTCAGGAGGCGAACAGAGA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAGCGTCTTCTGCAGTCTaGGCAGCTTTGGCTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSASSAV*AALALS Trigger: CGACAAAGCCAAAGCTGCTCAGACTGCAGAAGACGC...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTCTCCACCTTCATCTTaGGGTCTTGGTTCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSPPSS*GLGSFF Trigger: AAAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCGCCAGGGCTAGCTCCTaGTCTATTTCCCCCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTARASS*SISPTW Trigger: CCACGTGGGGGAAATAGAGCAGGAGCTAGCCCTGGC...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATGCCTGCTGGTGGGATaGTATGGCGGTCTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSCLLVG*YGGLQF Trigger: AAACTGGAGACCGCCATAGCATCCCACCAGCAGGCA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCCATTTCCACTAGGTaGTGGTCTTCTGCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSISTR*WSSALS Trigger: GGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGGCTGATCGACTTCTaGAAGGAGGCTTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKRLIDF*KEAFSS Trigger: TGAAGAGAAAGCCTCCTTGCAGAAGTCGATCAGCCT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTTTAAAGGTTCACACTaGAAATACCGCACTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCFKGSH*KYRTPA Trigger: GGCGGGAGTGCGGTATTTCCAGTGTGAACCTTTAAA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | CCTGCTGGTGGGATGCTATGGCGGTCTCCAGTTTGGACTTCCATAGAGCTATCATTTAAAGGTTCACACTaGAAATACCGCACTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAGGMLWRSPVWTSIELSFKGSH*KYRTPA Trigger: GGCGGGAGTGCGGTATTTCCAGTGTGAACCTTTAAA...TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATCTTTTGCCGTTGACTaGGACGGTTTGTGGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLSFAVD*DGLWGI Trigger: TATTCCCCACAAACCGTCCCAGTCAACGGCAAAAGA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCTCTATTTCCCCCACGTaGCTGGTAGCCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFSISPT*LVALAT Trigger: GGTGGCCAAGGCTACCAGCCACGTGGGGGAAATAGA...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGGTAGCTGGTCCATCTTaGCCTCTAGTTCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRVAGPS*PLVPGH Trigger: ATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTAC...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATGGCGGTCTCCAGTTTaGACTTCCATAGAGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLWRSPV*TSIELS Trigger: TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTGGCGGTCTCCAGTTTaGACTTCCATAGAGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCWRSPV*TSIELS Trigger: TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCTCCATTGCCTGCTGGTaGGATGCTATGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFSIACW*DAMAVS Trigger: GGAGACCGCCATAGCATCCCACCAGCAGGCAATGGA...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATACTAGCTCTTTCTCCTaGAGCTCTTTGGTAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDTSSFS*SSLVML Trigger: TAGCATTACCAAAGAGCTCCAGGAGAAAGAGCTAGT...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCAGTCTGAGCAGCTTTaGCTTTGTCGGCCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRQSEQL*LCRPVF Trigger: AAACACAGGCCGACAAAGCCAAAGCTGCTCAGACTG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTTGCATTTGTTTGCTTaGTGTCCTCCAAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCLHLFA*CPPRRP Trigger: TGGCCTCCTTGGAGGACACCAAGCAAACAAATGCAA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGTTGCATTTGTTTGCTTaGTGTCCTCCAAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKLHLFA*CPPRRP Trigger: TGGCCTCCTTGGAGGACACCAAGCAAACAAATGCAA...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| 3UTR CAA 72 bp | AACTCAGCAAATTCAGCGGAGTCCGTTCCAATGCCTTaGCTAAAGGACACCTTCAGCTCCTCCATTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSANSAESVPMP*LKDTFSSSIAC Trigger: GCAGGCAATGGAGGAGCTGAAGGTGTCCTTTAGCAAAGGCATTGGAACGGACTCCGCTGAATTTGCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACAGCAGTGGACAGAGGTaGAGCAGTTCTCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSSGQR*SSSPRS Trigger: GCTCCTGGGAGAACTGCTTCACCTCTGTCCACTGCT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCCTCTTCCAGCTGGTTaGGCAGCTCCACTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNPLPAG*AAPLSP Trigger: GGGAGAAAGTGGAGCTGCTCAACCAGCTGGAAGAGG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGACTCAGCAGTTCTTTTaGCTTGTTCAGCTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKTQQFF*LVQLFH Trigger: GTGGAAGAGCTGAACAAGTCAAAAGAACTGCTGAGT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCTCTTCCAGCTTCTGGTaGCTTGTGACTTCGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFSSSFW*LVTSSR Trigger: CCGGGACGAAGTCACAAGTCACCAGAAGCTGGAAGA...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCCACTATTACCGAGTTaGGGAAATCAATCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILPLLPS*GNQSDS Trigger: AGAGTCAGATTGATTTCCTCAACTCGGTAATAGTGG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTCTTGGTTCTTTCTTTaGAGATCCACTATTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSWFFL*RSTITE Trigger: CTCGGTAATAGTGGATCTTCAAAGAAAGAACCAAGA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCTTCTCCACTGGAGCTaGAGCAGCAGCAGGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNLLHWS*SSSRRL Trigger: AAGACGCCTGCTGCTGCTGCAGCTCCAGTGGAGAAG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCTTCTCCACTGGAGCTaGAGCAGCAGCAGGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTLLHWS*SSSRRL Trigger: AAGACGCCTGCTGCTGCTGCAGCTCCAGTGGAGAAG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACAGCCCACTGGCCTGGTaGGAACTGAGTTTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSPLAW*ELSFPK Trigger: CTTGGGGAAACTCAGTTCGCACCAGGCCAGTGGGCT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAGCCCACTGGCCTGGTaGGAACTGAGTTTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTSPLAW*ELSFPK Trigger: CTTGGGGAAACTCAGTTCGCACCAGGCCAGTGGGCT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATTCATCAGCTTGGCCTaGATGGTCTCCATCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLFISLA*MVSISL Trigger: TAAAGAGATGGAGACCATGCAGGCCAAGCTGATGAA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTTCATCAGCTTGGCCTaGATGGTCTCCATCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCFISLA*MVSISL Trigger: TAAAGAGATGGAGACCATGCAGGCCAAGCTGATGAA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCAGTGTACTTGGCCTaGAGAACCTCTAGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSVYLA*RTSSSF Trigger: AAAGGAGCTAGAGGTTCTGCAGGCCAAGTACACTGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGATCTGTTCCATGATCTaGATGGCGTCTTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRICSMI*MASSAV Trigger: GACTGCAGAAGACGCCATGCAGATCATGGAACAGAT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAGGCTGATCGACTTCTaGAAGGAGGCTTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRRLIDF*KEAFSS Trigger: TGAAGAGAAAGCCTCCTTGCAGAAGTCGATCAGCCT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCGTCTGCACAACTGAGTaGAGGGACTTGGCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTVCTTE*RDLAVA Trigger: TGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGAC...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGGGTTTCTTCTTGGACTaGTTTTCCTGGTCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKGFFLD*FSWSSL Trigger: CAGTGATGACCAGGAAAAGCAGTCCAAGAAGAAACC...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCATCGTTCTTCCCTATaGGTTCATCTAAAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDHRSSL*VHLKQS Trigger: GGATTGTTTTAGATGAACCCATAGGGAAGAACGATG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCTGCCTGCAGGCCGTTaGCTTCATCTTCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTLPAGR*LHLLPA Trigger: TGCAGGCAGAAGATGAAGCCAACGGCCTGCAGGCAG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACAGCCTCTGAAAGGTTaGAGATCGACTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSQPLKG*RSTHWQ Trigger: CTGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACGGCTTTGGCTTTGGCTaGGGTAGTAGACGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNGFGFG*GSRREA Trigger: GGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCC...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTGGCTTCGCTTCAGGCTaGCGGGCGTGGCGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIGFASG*RAWRPS Trigger: TGATGGCCGCCACGCCCGCCAGCCTGAAGCGAAGCC...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAGGGACTCGTTCTCTTTaGAAAGCTTCTCAGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSGTRSL*KASQWP Trigger: CGGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCC...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTCCTCCATTGCCTGCTaGTGGGATGCTATGGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTSSIAC*WDAMAV Trigger: GACCGCCATAGCATCCCACCAGCAGGCAATGGAGGA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGGTTTACCTTCGGAATTaGCTTTCCGAAGCGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKVYLRN*LSEAHQ Trigger: TTGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAAC...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCCTCCTCTGAAGTACTaGCAAACTTTTCTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDPPLKY*QTFLSK Trigger: CTTTGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCTTCTTCATGTTTTCTaGCTGCTTGCTGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKLLHVF*LLAADS Trigger: AGAGTCAGCAGCAAGCAGCCAGAAAACATGAAGAAG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACGTCGTCATTGCAGTTaGTTGCCCAGTGCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSRRHCS*LPSAQT Trigger: TGTTTGGGCACTGGGCAACCAACTGCAATGACGACG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTGGCCTGGTGCGAACTaGGTTTCCCCAAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTWPGAN*VSPRNW Trigger: CCAGTTTCTTGGGGAAACTCAGTTCGCACCAGGCCA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCCGTGTGCAGAGCCTTaGTCTCCTTCTGAAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTPCAEP*SPSETP Trigger: AGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAAGAGACCGCCTCCTCTaGAGTACTGGCAAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSRDRLL*STGKLF Trigger: GAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTTCATCTTTGTCAGCTaGGAAGAGTTATCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCFIFVS*EELSPD Trigger: GTCAGGAGATAACTCTTCTCAGCTGACAAAGATGAA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTCTTCCAGCTTCTGGTaGCTTGTGACTTCGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSSSFW*LVTSSR Trigger: CCGGGACGAAGTCACAAGTCACCAGAAGCTGGAAGA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTACATCGGCGTCTTTTCTaGACTCAGATTCTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLHRRLF*TQILSF Trigger: AAAAGAGAGAATCTGAGTTCAGAAAAGACGCCGATG...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGGCCTCTTGTTCTCCTTaGGTTGAAGTTCCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKASCSP*VEVPSF Trigger: AAAACTTGGAACTTCAACTCAAGGAGAACAAGAGGC...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTAGCCTCTTGTTCTCCTTaGGTTGAAGTTCCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLASCSP*VEVPSF Trigger: AAAACTTGGAACTTCAACTCAAGGAGAACAAGAGGC...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAGCATCAGTGTTACCTaGGGAGCTGCTGAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTSISVT*GAAELP Trigger: AGGCAGCTCAGCAGCTCCTCAGGTAACACTGATGCT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTCTCCACCTTCATCTTaGGGTCTTGGTTCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCSPPSS*GLGSFF Trigger: AAAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATCTCCACCTTCATCTTaGGGTCTTGGTTCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLSPPSS*GLGSFF Trigger: AAAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACTCCGGCTGCCATGGTaGGTGGAATGGGGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKLRLPW*VEWGGS Trigger: AGATCCTCCCCATTCCACTCACCATGGCAGCCGGAG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTGGTGCCCGAGATCTTaGGGGCGTAGCGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIWCPRS*GRSGRR Trigger: CCTCCTCCCGCTACGCCCGCAAGATCTCGGGCACCA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTTCATCAGCTTGGCCTaGATGGTCTCCATCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRFISLA*MVSISL Trigger: TAAAGAGATGGAGACCATGCAGGCCAAGCTGATGAA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAGTCTTGCATTTGTTTaGTTGGTGTCCTCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSLAFV*LVSSKE Trigger: CTCCTTGGAGGACACCAAGCAAACAAATGCAAGACT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACCCGTTGCCATTGAGTaGAGCTTCAGACATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSPVAIE*SFRHHL Trigger: GAGATGATGTCTGAAGCTGCACTCAATGGCAACGGG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTGAGCTGCGATGTAAAATTACCAATGACCTCGCTTTGTTCAGTGTACTTCTTCTCCACTGGAGCTaGAGCAGCAGCAGGCGTCTN | + |
|
Preference number: 4 (lower is better) Translates to: STELRCKITNDLALFSVLLLHWS*SSSRRL Trigger: NAGACGCCTGCTGCTGCTGCAGCTCCAGTGGAGAAG...AAGTACACTGAACAAAGCGAGGTCATTGGTAATTTTACATCGCAGCTCAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR CCA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCGAACAATCCATATTTaGGTTGACACTGAAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDRTIHI*VDTENT Trigger: GGTATTTTCAGTGTCAACCCAAATATGGATTGTTCG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTCAGGCTGGCGGGCGTaGCGGCCATCACTCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMSGWRA*RPSLAS Trigger: TGAGGCGAGTGATGGCCGCCACGCCCGCCAGCCTGA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGGGCTTCGCTTCAGGCTaGCGGGCGTGGCGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMGFASG*RAWRPS Trigger: TGATGGCCGCCACGCCCGCCAGCCTGAAGCGAAGCC...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATTCTCCTCTTCCAGCTaGTTGAGCAGCTCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSFSSSS*LSSSTF Trigger: GAAAGTGGAGCTGCTCAACCAGCTGGAAGAGGAGAA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCTTCTAACTCCCTCTaGAGTTTGTCAGCTTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSSNSL*SLSALV Trigger: GACCAAAGCTGACAAACTCCAGAGGGAGTTAGAAGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACGCTGGTGGGATGCTATaGCGGTCTCCAGTTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNAGGML*RSPVWT Trigger: AGTCCAAACTGGAGACCGCCATAGCATCCCACCAGC...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTAACTAGCTCTTTCTCCTaGAGCTCTTTGGTAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLTSSFS*SSLVML Trigger: TAGCATTACCAAAGAGCTCCAGGAGAAAGAGCTAGT...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTCTTCTGCAGAAAACTaGCGTTTTCATTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCSSAEN*RFHWPL Trigger: CAAAGGCCAATGAAAACGCCAGTTTTCTGCAGAAGA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCTTCTTCATGTTTTCTaGCTGCTTGCTGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRLLHVF*LLAADS Trigger: AGAGTCAGCAGCAAGCAGCCAGAAAACATGAAGAAG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACAGTCTGAGCAGCTTTaGCTTTGTCGGCCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSQSEQL*LCRPVF Trigger: AAACACAGGCCGACAAAGCCAAAGCTGCTCAGACTG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCCGTCGTCATTGCAGTTaGTTGCCCAGTGCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFRRHCS*LPSAQT Trigger: TGTTTGGGCACTGGGCAACCAACTGCAATGACGACG...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCGGGCATGCTCCAGTTTaGTCTGCGTCTCAAGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTGHAPV*SASQDR Trigger: GCGATCTTGAGACGCAGACCAAACTGGAGCATGCCC...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
||
| 3UTR CAA 72 bp | ATCACATCGGAGTTCTCCTTATTAGCGTGGTCGAGCTaGCTTCTCAGGGACTCGTTCTCTTTGGAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ITSEFSLLAWSS*LLRDSFSLESF Trigger: GAAGCTTTCCAAAGAGAACGAGTCCCTGAGAAGCAAGCTCGACCACGCTAATAAGGAGAACTCCGATGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 72 bp | CCTTTTGGTGCAGTTTATTTACGGTATCTTGCATCCTaGTCTGAGCAGAGACCGCCTCCTCTGAAGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFGAVYLRYLAS*SEQRPPPLKYW Trigger: CCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGATGCAAGATACCGTAAATAAACTGCACCAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATTTGTGGGGAATATTTaGGGGAGTGGCTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSFVGNI*GSGWRR Trigger: TCTTCTCCAGCCACTCCCTCAAATATTCCCCACAAA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCCCTGTCTCCGACCTTaGGCTCCCGCTCCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMPCLRP*APAPPS Trigger: AGAAGGGGGAGCGGGAGCTCAAGGTCGGAGACAGGG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACCTCTTCCAGCTGGTTaGGCAGCTCCACTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKPLPAG*AAPLSP Trigger: GGGAGAAAGTGGAGCTGCTCAACCAGCTGGAAGAGG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGATCGCCTTTGGTAATTaGTTCTTCTTCAACTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKIAFGN*FFFNSE Trigger: TTCCGAGTTGAAGAAGAATCAATTACCAAAGGCGAT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTCCATCTCTTTAGCATaGGCAGACCGCTCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSISLA*ADRSES Trigger: GGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCAGAGACCGCCTCCTCTaGAGTACTGGCAAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFRDRLL*STGKLF Trigger: GAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCTGGCTGCTTGCTGCTaGCTCTGCTCAGCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTLAACC*LCSALR Trigger: TCTTAAAGCTGAGCAGAGTCAGCAGCAAGCAGCCAG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCATCGGCGTCTTTTCTaGACTCAGATTCTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRHRRLF*TQILSF Trigger: AAAAGAGAGAATCTGAGTTCAGAAAAGACGCCGATG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGGCCTCTTGTTCTCCTTaGGTTGAAGTTCCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRASCSP*VEVPSF Trigger: AAAACTTGGAACTTCAACTCAAGGAGAACAAGAGGC...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCATCGGCGTCTTTTCTaGACTCAGATTCTCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRHRRLF*TQILLK Trigger: CTTTAAGAGAATCTGAGTTCAGAAAAGACGCCGATG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063905.12 |
||
| CDS-3UTR TCA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCCACTATTACCGAGTTaGGGAAATCAATCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKYCQAWKKALLRAGSAKPLLPS*GNQSFA Trigger: AGCAAATGATTGATTTCCTCAACTCGGTAATAGTGG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAGCTCCTCCATGTCCTaGATCAGATCTCTGTTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTSSSMS*IRSLFA Trigger: GGCGAACAGAGATCTGATGCAGGACATGGAGGAGCT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAAGGCTGATCGACTTCTaGAAGGAGGCTTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSRLIDF*KEAFSS Trigger: TGAAGAGAAAGCCTCCTTGCAGAAGTCGATCAGCCT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTATTGTCTTCTCCACTaGAGCTGCAGCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTYCLLH*SCSSSR Trigger: CCTGCTGCTGCTGCAGCTCCAGTGGAGAAGACAATA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTACATCGTTCTTCCCTATaGGTTCATCTAAAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WKKALLRAGSAKRRAWGLHRSSL*VHLKQS Trigger: GGATTGTTTTAGATGAACCCATAGGGAAGAACGATG...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | CTGCATGGTCTCCATCTCTTTAGCATGAGCAGACCGCTCAGAGTCCTGTTTACTGAATATTTGAGGGAGTaGCTGGAGAAGAAGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHGLHLFSMSRPLRVLFTEYLRE*LEKKTP Trigger: TGGTGTCTTCTTCTCCAGCCACTCCCTCAAATATTC...AGTAAACAGGACTCTGAGCGGTCTGCTCATGCTAAAGAGATGGAGACCATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| CDS-3UTR CCA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCGAACAATCCATATTTaGGTTGACACTGAAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: DKDDSWNLTAETTAEPILRTIHI*VDTENT Trigger: GGTATTTTCAGTGTCAACCCAAATATGGATTGTTCG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGATCTTTGTCACTTTGTaGACAGGAGCGAACAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRIFVTL*TGANNP Trigger: TGGATTGTTCGCTCCTGTCCACAAAGTGACAAAGAT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAGGCTTTGGCTTTGGCTaGGGTAGTAGACGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKGFGFG*GSRREA Trigger: GGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCC...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCCCCAGGAGGTTTACTaGACTCTAGCCTTCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTPQEVY*TLAFFG Trigger: TCCGAAGAAGGCTAGAGTCCAGTAAACCTCCTGGGG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACGGGACTCGTTCTCTTTaGAAAGCTTCTCAGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNGTRSL*KASQWP Trigger: CGGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCC...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCCATTGCCTGCTGGTaGGATGCTATGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKSIACW*DAMAVS Trigger: GGAGACCGCCATAGCATCCCACCAGCAGGCAATGGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCTTCTGCAGAAAACTaGCGTTTTCATTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSSAEN*RFHWPL Trigger: CAAAGGCCAATGAAAACGCCAGTTTTCTGCAGAAGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACACATCTGTGCCTGGGTaGGACAGTCCTCTGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNTSVPG*DSPLYR Trigger: ACGATACAGAGGACTGTCCCACCCAGGCACAGATGT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATGGCCTGGTGCGAACTaGGTTTCCCCAAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKWPGAN*VSPRNW Trigger: CCAGTTTCTTGGGGAAACTCAGTTCGCACCAGGCCA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCCCGCTCCCCCTTCTTaGCAGAGCCAGCCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIPAPPS*QSQPLK Trigger: TTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCGGG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTCTTCAACTCGGAACTaGAGGTCCTCAACCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSSTRN*RSSTFL Trigger: GAGGAAGGTTGAGGACCTTCAGTTCCGAGTTGAAGA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCTCTGTTCGCCTCCTaGGCAGCCTTCAGCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKSLFAS*AAFSLS Trigger: GGATAAGCTGAAGGCTGCTCAGGAGGCGAACAGAGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAGCGTCTTCTGCAGTCTaGGCAGCTTTGGCTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKASSAV*AALALS Trigger: CGACAAAGCCAAAGCTGCTCAGACTGCAGAAGACGC...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTGGTCATCTGTTCCATaGTCTGCATGGCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTWSSVP*SAWRLL Trigger: CAGAAGACGCCATGCAGATCATGGAACAGATGACCA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAAGCATCAGTGTTACCTaGGGAGCTGCTGAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKSISVT*GAAELP Trigger: AGGCAGCTCAGCAGCTCCTCAGGTAACACTGATGCT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCTTGGTTCTTTCTTTaGAGATCCACTATTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSWFFL*RSTITE Trigger: CTCGGTAATAGTGGATCTTCAAAGAAAGAACCAAGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTCCATTTCCACTAGGTaGTGGTCTTCTGCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTSISTR*WSSALS Trigger: GGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTGTTCCTCCTTTTGGTaGAGTTTATTTACGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCCSSFW*SLFTVS Trigger: AGATACCGTAAATAAACTGCACCAAAAGGAGGAACA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAAGTCTTGCATTTGTTTaGTTGGTGTCCTCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSSLAFV*LVSSKE Trigger: CTCCTTGGAGGACACCAAGCAAACAAATGCAAGACT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAATCTTCCGACATCTGTaGCTGGGTGGGACAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKIFRHL*LGGTVL Trigger: GAGGACTGTCCCACCCAGGCACAGATGTCGGAAGAT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTTGACAGCACTGAGCTGCGATGTAAAATTACCAATGACCTCGCTTTGTTCAGTTATTGTCTTCTCCACTaGAGCTGCAGCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDSTELRCKITNDLALFSYCLLH*SCSSSR Trigger: CCTGCTGCTGCTGCAGCTCCAGTGGAGAAGACAATA...ACTGAACAAAGCGAGGTCATTGGTAATTTTACATCGCAGCTCAGTGCTGTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR CCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAGAATATTTGAGGGAGTaGCTGGAGAAGAAGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSEYLRE*LEKKTP Trigger: TGGTGTCTTCTTCTCCAGCCACTCCCTCAAATATTC...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCGAACAATCCATATTTaGGTTGACACTGAAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCRTIHI*VDTENT Trigger: GGTATTTTCAGTGTCAACCCAAATATGGATTGTTCG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAATAGTCCTGTCCGGCTaGGTTTGCTGCTCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKIVLSG*VCCSQR Trigger: CCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTAT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTTCTCCTCTTCCAGCTaGTTGAGCAGCTCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTFSSSS*LSSSTF Trigger: GAAAGTGGAGCTGCTCAACCAGCTGGAAGAGGAGAA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAGCTGGTGGGATGCTATaGCGGTCTCCAGTTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKAGGML*RSPVWT Trigger: AGTCCAAACTGGAGACCGCCATAGCATCCCACCAGC...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCAGTCTGAGCAGCTTTaGCTTTGTCGGCCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTQSEQL*LCRPVF Trigger: AAACACAGGCCGACAAAGCCAAAGCTGCTCAGACTG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CAA 72 bp | TGTCTAAGTGTCTCGAGCTCCAGTTTACCTTCGGAATaGGCTTTCCGAAGCGCATCAAGATCCAAGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSVSSSSLPSE*AFRSASRSKSF Trigger: AAAGCTCTTGGATCTTGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAACTGGAGCTCGAGACACTTAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 72 bp | AGACCAGTGAGCACTAGCTCTTTCTCCTGGAGCTCTTaGGTAATGCTATTAGCCTTGCTACTTTCAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPVSTSSFSWSS*VMLLALLLSAF Trigger: GAACGCTGAAAGTAGCAAGGCTAATAGCATTACCAAAGAGCTCCAGGAGAAAGAGCTAGTGCTCACTGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTAGCAGTGGACAGAGGTaGAGCAGTTCTCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISSGQR*SSSPRS Trigger: GCTCCTGGGAGAACTGCTTCACCTCTGTCCACTGCT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCCCGCTCCCCCTTCTTaGCAGAGCCAGCCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMPAPPS*QSQPLK Trigger: TTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCGGG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCCCGCTCCCCCTTCTTaGCAGAGCCAGCCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMPAPPS*QSQPLK Trigger: TTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCGGG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCCTCTTCCAGCTGGTTaGGCAGCTCCACTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIPLPAG*AAPLSP Trigger: GGGAGAAAGTGGAGCTGCTCAACCAGCTGGAAGAGG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGTGTCCAGTCTCGCTTTaGCGGCCTCCAGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMCPVSL*RPPGCP Trigger: AGGACAGCCTGGAGGCCGTCAAAGCGAGACTGGACA...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCACTCAGCAGTTCTTTTaGCTTGTTCAGCTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFTQQFF*LVQLFH Trigger: GTGGAAGAGCTGAACAAGTCAAAAGAACTGCTGAGT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATCTCCACCTTCATCTTaGGGTCTTGGTTCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSSPPSS*GLGSFF Trigger: AAAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCTTCTCCACTGGAGCTaGAGCAGCAGCAGGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIILLHWS*SSSRRL Trigger: AAGACGCCTGCTGCTGCTGCAGCTCCAGTGGAGAAG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGAGTTCTCCCAGGAGCTaGCTGCAGGCCGTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMSSPRS*LQAVGF Trigger: GAAGCCAACGGCCTGCAGGCAGCTCCTGGGAGAACT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTCAGTGTACTTGGCCTaGAGAACCTCTAGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSVYLA*RTSSSF Trigger: AAAGGAGCTAGAGGTTCTGCAGGCCAAGTACACTGA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACATCTGTTCCATGATCTaGATGGCGTCTTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNICSMI*MASSAV Trigger: GACTGCAGAAGACGCCATGCAGATCATGGAACAGAT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAGGCTGATCGACTTCTaGAAGGAGGCTTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTRLIDF*KEAFSS Trigger: TGAAGAGAAAGCCTCCTTGCAGAAGTCGATCAGCCT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTGTCTTCTCCACTaGAGCTGCAGCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKYCLLH*SCSSSR Trigger: CCTGCTGCTGCTGCAGCTCCAGTGGAGAAGACAATA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTTTAAAGGTTCACACTaGAAATACCGCACTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNFKGSH*KYRTPA Trigger: GGCGGGAGTGCGGTATTTCCAGTGTGAACCTTTAAA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCTGCCTGCAGGCCGTTaGCTTCATCTTCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIILPAGR*LHLLPA Trigger: TGCAGGCAGAAGATGAAGCCAACGGCCTGCAGGCAG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTACCTTCGGAATTGGCTTTCCGAAGCGCATCAAGATCCAAGAGCTTTTCTTCTTTTGCCGTTGACTaGGACGGTTTGTGGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSELAFRSASRSKSFSSFAVD*DGLWGI Trigger: TATTCCCCACAAACCGTCCCAGTCAACGGCAAAAGA...AGAAAAGCTCTTGGATCTTGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR CCA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCGAACAATCCATATTTaGGTTGACACTGAAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: KILPGSHLSQRVSLGTNRRTIHI*VDTENT Trigger: GGTATTTTCAGTGTCAACCCAAATATGGATTGTTCG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTGGCTTTGGCTTTGGCTaGGGTAGTAGACGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIGFGFG*GSRREA Trigger: GGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCC...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTCTATTTCCCCCACGTaGCTGGTAGCCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISISPT*LVALAT Trigger: GGTGGCCAAGGCTACCAGCCACGTGGGGGAAATAGA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCTCTTCTAACTCCCTCTaGAGTTTGTCAGCTTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFSSNSL*SLSALV Trigger: GACCAAAGCTGACAAACTCCAGAGGGAGTTAGAAGA...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCGGTGGTCAGTATGGATaGCTTCTAGCTTTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFGGQYG*LLAFLA Trigger: TGCAAGAAAAGCTAGAAGCCATCCATACTGACCACC...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTCCATTGCCTGCTGGTaGGATGCTATGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISIACW*DAMAVS Trigger: GGAGACCGCCATAGCATCCCACCAGCAGGCAATGGA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAACTAGCTCTTTCTCCTaGAGCTCTTTGGTAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSTSSFS*SSLVML Trigger: TAGCATTACCAAAGAGCTCCAGGAGAAAGAGCTAGT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTTGCATTTGTTTGCTTaGTGTCCTCCAAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNLHLFA*CPPRRP Trigger: TGGCCTCCTTGGAGGACACCAAGCAAACAAATGCAA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAACATCTGTGCCTGGGTaGGACAGTCCTCTGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKTSVPG*DSPLYR Trigger: ACGATACAGAGGACTGTCCCACCCAGGCACAGATGT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCTCTTAAAGTGTTACTaGGCAAGCTCTTTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCLLKCY*ASSFSF Trigger: AAATGAAAAAGAGCTTGCCCAGTAACACTTTAAGAG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063905.12 |
||
| 3UTR CAA 72 bp | TTTATTAACCCAGAATGCCGACGGGCAGCAGATGTATaGACTGCTCACTCATCAAGCACAGTGGATAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: FINPECRRAADV*TAHSSSTVDNL Trigger: AAGGTTATCCACTGTGCTTGATGAGTGAGCAGTCAATACATCTGCTGCCCGTCGGCATTCTGGGTTAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CAA 72 bp | TGCAGAAAACTGGCGTTTTCATTGGCCTTTGTAAGCTaGAGCTGGAGTTCTTCCACGGATCTTTCCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRKLAFSLAFVS*SWSSSTDLSFR Trigger: TCTGAAGGAAAGATCCGTGGAAGAACTCCAGCTCAAGCTTACAAAGGCCAATGAAAACGCCAGTTTTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAATCGCCTTTGGTAATTaGTTCTTCTTCAACTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSIAFGN*FFFNSE Trigger: TTCCGAGTTGAAGAAGAATCAATTACCAAAGGCGAT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCCGTGTGCAGAGCCTTaGTCTCCTTCTGAAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIPCAEP*SPSETP Trigger: AGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTCTCTGTTCGCCTCCTaGGCAGCCTTCAGCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISLFAS*AAFSLS Trigger: GGATAAGCTGAAGGCTGCTCAGGAGGCGAACAGAGA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACACTCAGCAGTTCTTTTaGCTTGTTCAGCTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNTQQFF*LVQLFH Trigger: GTGGAAGAGCTGAACAAGTCAAAAGAACTGCTGAGT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGAGCTCCTCCATTGCCTaGTGGTGGGATGCTATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMSSSIA*WWDAMA Trigger: CGCCATAGCATCCCACCAGCAGGCAATGGAGGAGCT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTTCATCAGCTTGGCCTaGATGGTCTCCATCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTFISLA*MVSISL Trigger: TAAAGAGATGGAGACCATGCAGGCCAAGCTGATGAA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAGTCTTGCATTTGTTTaGTTGGTGTCCTCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTSLAFV*LVSSKE Trigger: CTCCTTGGAGGACACCAAGCAAACAAATGCAAGACT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACAGTCTTGCATTTGTTTaGTTGGTGTCCTCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSLAFV*LVSSKE Trigger: CTCCTTGGAGGACACCAAGCAAACAAATGCAAGACT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGGTCTGCACAACTGAGTaGAGGGACTTGGCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMVCTTE*RDLAVA Trigger: TGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGAC...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTATCTTCCGACATCTGTaGCTGGGTGGGACAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIIFRHL*LGGTVL Trigger: GAGGACTGTCCCACCCAGGCACAGATGTCGGAAGAT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACAGTTGGTTGCCCAGTaGCCAAACATCTCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKQLVAQ*PNISQI Trigger: GATCTGTGAGATGTTTGGGCACTGGGCAACCAACTG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTCCTTAGTGCGGGCATaGTCCAGTTTGGTCTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISLVRA*SSLVCV Trigger: GACGCAGACCAAACTGGAGCATGCCCGCACTAAGGA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCACACCACTCCCCCTTaGCAAAGTCGGTCTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMHTTPP*QSRSRQ Trigger: TTGGCGAGACCGACTTTGCCAAGGGGGAGTGGTGTG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCATCTTTGTCACTTTGTaGACAGGAGCGAACAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFIFVTL*TGANNP Trigger: TGGATTGTTCGCTCCTGTCCACAAAGTGACAAAGAT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGGGCTTTGGCTTTGGCTaGGGTAGTAGACGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMGFGFG*GSRREA Trigger: GGCTTCCCGTCTACTACCCCAGCCAAAGCCAAAGCC...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTATAGTCCTGTCCGGCTaGGTTTGCTGCTCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIIVLSG*VCCSQR Trigger: CCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTAT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTCTTCTAACTCCCTCTaGAGTTTGTCAGCTTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSSNSL*SLSALV Trigger: GACCAAAGCTGACAAACTCCAGAGGGAGTTAGAAGA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGTCCATTGCCTGCTGGTaGGATGCTATGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMSIACW*DAMAVS Trigger: GGAGACCGCCATAGCATCCCACCAGCAGGCAATGGA...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTCCTCCATTGCCTGCTaGTGGGATGCTATGGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMSSIAC*WDAMAV Trigger: GACCGCCATAGCATCCCACCAGCAGGCAATGGAGGA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCTTCTTCATGTTTTCTaGCTGCTTGCTGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTLLHVF*LLAADS Trigger: AGAGTCAGCAGCAAGCAGCCAGAAAACATGAAGAAG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCCGTGTGCAGAGCCTTaGTCTCCTTCTGAAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMPCAEP*SPSETP Trigger: AGGCGTTTCAGAAGGAGATCAAGGCTCTGCACACGG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCTGGCTGCTTGCTGCTaGCTCTGCTCAGCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIILAACC*LCSALR Trigger: TCTTAAAGCTGAGCAGAGTCAGCAGCAAGCAGCCAG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTCTTCCAGCTTCTGGTaGCTTGTGACTTCGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMSSSFW*LVTSSR Trigger: CCGGGACGAAGTCACAAGTCACCAGAAGCTGGAAGA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCATCGGCGTCTTTTCTaGACTCAGATTCTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNHRRLF*TQILSF Trigger: AAAAGAGAGAATCTGAGTTCAGAAAAGACGCCGATG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGAGCATCAGTGTTACCTaGGGAGCTGCTGAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMSISVT*GAAELP Trigger: AGGCAGCTCAGCAGCTCCTCAGGTAACACTGATGCT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCCACTATTACCGAGTTaGGGAAATCAATCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNPLLPS*GNQSDS Trigger: AGAGTCAGATTGATTTCCTCAACTCGGTAATAGTGG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCTCTTGGTTCTTTCTTTaGAGATCCACTATTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFSWFFL*RSTITE Trigger: CTCGGTAATAGTGGATCTTCAAAGAAAGAACCAAGA...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTCTCCACCTTCATCTTaGGGTCTTGGTTCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTSPPSS*GLGSFF Trigger: AAAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGTGCCTGCTGGTGGGATaGTATGGCGGTCTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMCLLVG*YGGLQF Trigger: AAACTGGAGACCGCCATAGCATCCCACCAGCAGGCA...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATGTTCCTCCTTTTGGTaGAGTTTATTTACGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: HILKDIQVKTERRRLAGSCSSFW*SLFTVS Trigger: AGATACCGTAAATAAACTGCACCAAAAGGAGGAACA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGATCTTCCGACATCTGTaGCTGGGTGGGACAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMIFRHL*LGGTVL Trigger: GAGGACTGTCCCACCCAGGCACAGATGTCGGAAGAT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGAGGTCTCGTCGTCATTaGAGTTGGTTGCCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMRSRRH*SWLPSA Trigger: GGCACTGGGCAACCAACTGCAATGACGACGAGACCT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGAGGTCTCGTCGTCATTaGAGTTGGTTGCCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMRSRRH*SWLPSA Trigger: GGCACTGGGCAACCAACTGCAATGACGACGAGACCT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATTTAAAGGTTCACACTaGAAATACCGCACTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKFKGSH*KYRTPA Trigger: GGCGGGAGTGCGGTATTTCCAGTGTGAACCTTTAAA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCTTTTGCCGTTGACTaGGACGGTTTGTGGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKSFAVD*DGLWGI Trigger: TATTCCCCACAAACCGTCCCAGTCAACGGCAAAAGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCAGCCTCTGAAAGGTTaGAGATCGACTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIQPLKG*RSTHWQ Trigger: CTGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCATCTTTGTCACTTTGTaGACAGGAGCGAACAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTIFVTL*TGANNP Trigger: TGGATTGTTCGCTCCTGTCCACAAAGTGACAAAGAT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACCCTGGTGGTCAGTATaGATGGCTTCTAGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKPWWSV*MASSFS Trigger: AGAAAAGCTAGAAGCCATCCATACTGACCACCAGGG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATGGCGGTCTCCAGTTTaGACTTCCATAGAGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKWRSPV*TSIELS Trigger: TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCCCTCCTCTGAAGTACTaGCAAACTTTTCTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFPPLKY*QTFLSK Trigger: CTTTGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGG...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTCTTCAACTCGGAACTaGAGGTCCTCAACCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISSTRN*RSSTFL Trigger: GAGGAAGGTTGAGGACCTTCAGTTCCGAGTTGAAGA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCATCGCCTTTGGTAATTaGTTCTTCTTCAACTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTIAFGN*FFFNSE Trigger: TTCCGAGTTGAAGAAGAATCAATTACCAAAGGCGAT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTAGAGACCGCCTCCTCTaGAGTACTGGCAAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIRDRLL*STGKLF Trigger: GAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCAGAAGAGTTATCTCCTaGCATCTTCATTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFRRVIS*HLHYFC Trigger: GCAGAAATAATGAAGATGTCAGGAGATAACTCTTCT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTGGTCATCTGTTCCATaGTCTGCATGGCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIWSSVP*SAWRLL Trigger: CAGAAGACGCCATGCAGATCATGGAACAGATGACCA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAACTCAGCAGTTCTTTTaGCTTGTTCAGCTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKTQQFF*LVQLFH Trigger: GTGGAAGAGCTGAACAAGTCAAAAGAACTGCTGAGT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTCTTGGTTCTTTCTTTaGAGATCCACTATTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTSWFFL*RSTITE Trigger: CTCGGTAATAGTGGATCTTCAAAGAAAGAACCAAGA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCTGTTCCTCCTTTTGGTaGAGTTTATTTACGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFCSSFW*SLFTVS Trigger: AGATACCGTAAATAAACTGCACCAAAAGGAGGAACA...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCCCGTTGCCATTGAGTaGAGCTTCAGACATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIPVAIE*SFRHHL Trigger: GAGATGATGTCTGAAGCTGCACTCAATGGCAACGGG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCTACTTCCTGTGCTCTCAATGCTAGGTCCTTTTCTAGTTCCATTATTCCATCGTTCTTCCCTATaGGTTCATCTAAAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AQLLPVLSMLGPFLVPLFHRSSL*VHLKQS Trigger: GGATTGTTTTAGATGAACCCATAGGGAAGAACGATG...GAATAATGGAACTAGAAAAGGACCTAGCATTGAGAGCACAGGAAGTAGCTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAGAATATTTGAGGGAGTaGCTGGAGAAGAAGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKEYLRE*LEKKTP Trigger: TGGTGTCTTCTTCTCCAGCCACTCCCTCAAATATTC...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTGTAGCTGGTCCATCTTaGCCTCTAGTTCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIVAGPS*PLVPGH Trigger: ATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTAC...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCCCCAGGAGGTTTACTaGACTCTAGCCTTCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMPQEVY*TLAFFG Trigger: TCCGAAGAAGGCTAGAGTCCAGTAAACCTCCTGGGG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCCTCCTCTGAAGTACTaGCAAACTTTTCTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLKNPENKDGSASPPTPPLKY*QTFLSK Trigger: CTTTGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGACATCTGTGCCTGGGTaGGACAGTCCTCTGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMTSVPG*DSPLYR Trigger: ACGATACAGAGGACTGTCCCACCCAGGCACAGATGT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCGTCGTCATTGCAGTTaGTTGCCCAGTGCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMRRHCS*LPSAQT Trigger: TGTTTGGGCACTGGGCAACCAACTGCAATGACGACG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| 3UTR CAA 72 bp | CAAAGTCTGAAGTTCTTTCTCCAAAGTCTCCTTCACTaGATTGACTTGATTCAAACTGTCCTGCAGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLKFFLQSLLH*IDLIQTVLQTS Trigger: ACTGGTCTGCAGGACAGTTTGAATCAAGTCAATCAAGTGAAGGAGACTTTGGAGAAAGAACTTCAGACTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| 3UTR CAA 72 bp | CAGTTCAGACGACAACACGTTAAACTGTTCCTCCTTTaGGTGCAGTTTATTTACGGTATCTTGCATCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QFRRQHVKLFLL*VQFIYGILHPC Trigger: ACAAGGATGCAAGATACCGTAAATAAACTGCACCAAAAGGAGGAACAGTTTAACGTGTTGTCGTCTGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTTTGTGGGGAATATTTaGGGGAGTGGCTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIFVGNI*GSGWRR Trigger: TCTTCTCCAGCCACTCCCTCAAATATTCCCCACAAA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTGCTTCATCTTCTGCCTaGACCTTCCTCGTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIASSSA*TFLVSF Trigger: AAAGCTAACGAGGAAGGTGCAGGCAGAAGATGAAGC...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTCCATTTCCACTAGGTaGTGGTCTTCTGCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMSISTR*WSSALS Trigger: GGACAGTGCAGAAGACCAGCACCTAGTGGAAATGGA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCCCGTTGCCATTGAGTaGAGCTTCAGACATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMPVAIE*SFRHHL Trigger: GAGATGATGTCTGAAGCTGCACTCAATGGCAACGGG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCAGTTGGTTGCCCAGTaGCCAAACATCTCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMQLVAQ*PNISQI Trigger: GATCTGTGAGATGTTTGGGCACTGGGCAACCAACTG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCAGTTGGTTGCCCAGTaGCCAAACATCTCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMQLVAQ*PNISQI Trigger: GATCTGTGAGATGTTTGGGCACTGGGCAACCAACTG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTCTTTTGCCGTTGACTaGGACGGTTTGTGGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISFAVD*DGLWGI Trigger: TATTCCCCACAAACCGTCCCAGTCAACGGCAAAAGA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGGTAGCTGGTCCATCTTaGCCTCTAGTTCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMVAGPS*PLVPGH Trigger: ATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTAC...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGTTCTCCTCTTCCAGCTaGTTGAGCAGCTCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMFSSSS*LSSSTF Trigger: GAAAGTGGAGCTGCTCAACCAGCTGGAAGAGGAGAA...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCTTCTGCAGAAAACTaGCGTTTTCATTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKSSAEN*RFHWPL Trigger: CAAAGGCCAATGAAAACGCCAGTTTTCTGCAGAAGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTTGCATTTGTTTGCTTaGTGTCCTCCAAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIILHLFA*CPPRRP Trigger: TGGCCTCCTTGGAGGACACCAAGCAAACAAATGCAA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGGGCGGGGTTTCTTCTTaGACTGCTTTTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMGGVSS*TAFPGH Trigger: ATGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCC...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCAGTCCTCTGTATCGTaGAGGTCAAAGCAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMQSSVS*RSKQSQ Trigger: CTGTGACTGCTTTGACCTCCACGATACAGAGGACTG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTGCTTTGAAGGTCGGGTaGATATGCCCTTTAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIALKVG*ICPLKV Trigger: AACCTTTAAAGGGCATATTCACCCGACCTTCAAAGC...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCTTGGTTCTTTCTTTaGAGATCCACTATTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKSWFFL*RSTITE Trigger: CTCGGTAATAGTGGATCTTCAAAGAAAGAACCAAGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGGCTTCATCTTCTGCCTaGACCTTCCTCGTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMASSSA*TFLVSF Trigger: AAAGCTAACGAGGAAGGTGCAGGCAGAAGATGAAGC...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR GCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGATCTGTTCCATGATCTaGATGGCGTCTTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMICSMI*MASSAV Trigger: GACTGCAGAAGACGCCATGCAGATCATGGAACAGAT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCCCTGGTGGTCAGTATaGATGGCTTCTAGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMPWWSV*MASSFS Trigger: AGAAAAGCTAGAAGCCATCCATACTGACCACCAGGG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCTTCTTCATGTTTTCTaGCTGCTTGCTGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIILLHVF*LLAADS Trigger: AGAGTCAGCAGCAAGCAGCCAGAAAACATGAAGAAG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAAGAAGAGTTATCTCCTaGCATCTTCATTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKRRVIS*HLHYFC Trigger: GCAGAAATAATGAAGATGTCAGGAGATAACTCTTCT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTTCATCTTTGTCAGCTaGGAAGAGTTATCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIFIFVS*EELSPD Trigger: GTCAGGAGATAACTCTTCTCAGCTGACAAAGATGAA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTTCATCAGCTTGGCCTaGATGGTCTCCATCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMFISLA*MVSISL Trigger: TAAAGAGATGGAGACCATGCAGGCCAAGCTGATGAA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGGGTTTCTTCTTGGACTaGTTTTCCTGGTCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMGFFLD*FSWSSL Trigger: CAGTGATGACCAGGAAAAGCAGTCCAAGAAGAAACC...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGGGTTTCTTCTTGGACTaGTTTTCCTGGTCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMGFFLD*FSWSSL Trigger: CAGTGATGACCAGGAAAAGCAGTCCAAGAAGAAACC...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGGAATATTTGAGGGAGTaGCTGGAGAAGAAGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMEYLRE*LEKKTP Trigger: TGGTGTCTTCTTCTCCAGCCACTCCCTCAAATATTC...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACGAACAATCCATATTTaGGTTGACACTGAAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: LNLKNPENKDGSASPPTKRTIHI*VDTENT Trigger: GGTATTTTCAGTGTCAACCCAAATATGGATTGTTCG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTATCTTTGTCACTTTGTaGACAGGAGCGAACAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIIFVTL*TGANNP Trigger: TGGATTGTTCGCTCCTGTCCACAAAGTGACAAAGAT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGGGTGGTCAGTATGGATaGCTTCTAGCTTTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMGGQYG*LLAFLA Trigger: TGCAAGAAAAGCTAGAAGCCATCCATACTGACCACC...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGGGTGGTCAGTATGGATaGCTTCTAGCTTTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMGGQYG*LLAFLA Trigger: TGCAAGAAAAGCTAGAAGCCATCCATACTGACCACC...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCTTCTTCATGTTTTCTaGCTGCTTGCTGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMLLHVF*LLAADS Trigger: AGAGTCAGCAGCAAGCAGCCAGAAAACATGAAGAAG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGTTCATCTTTGTCAGCTaGGAAGAGTTATCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMFIFVS*EELSPD Trigger: GTCAGGAGATAACTCTTCTCAGCTGACAAAGATGAA...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCATCGGCGTCTTTTCTaGACTCAGATTCTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMHRRLF*TQILSF Trigger: AAAAGAGAGAATCTGAGTTCAGAAAAGACGCCGATG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGGCCTCTTGTTCTCCTTaGGTTGAAGTTCCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMASCSP*VEVPSF Trigger: AAAACTTGGAACTTCAACTCAAGGAGAACAAGAGGC...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCCACTATTACCGAGTTaGGGAAATCAATCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMPLLPS*GNQSDS Trigger: AGAGTCAGATTGATTTCCTCAACTCGGTAATAGTGG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGATCTTTGTCACTTTGTaGACAGGAGCGAACAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMIFVTL*TGANNP Trigger: TGGATTGTTCGCTCCTGTCCACAAAGTGACAAAGAT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR TCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGATCGCCTTTGGTAATTaGTTCTTCTTCAACTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMIAFGN*FFFNSE Trigger: TTCCGAGTTGAAGAAGAATCAATTACCAAAGGCGAT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTAGAAGAGTTATCTCCTaGCATCTTCATTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIRRVIS*HLHYFC Trigger: GCAGAAATAATGAAGATGTCAGGAGATAACTCTTCT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCCACTATTACCGAGTTaGGGAAATCAATCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMPLLPS*GNQSFA Trigger: AGCAAATGATTGATTTCCTCAACTCGGTAATAGTGG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTGTTCCTCCTTTTGGTaGAGTTTATTTACGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKQGRKCKPTYQIFIIICSSFW*SLFTVS Trigger: AGATACCGTAAATAAACTGCACCAAAAGGAGGAACA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CCA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCATCGTTCTTCCCTATaGGTTCATCTAAAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMHRSSL*VHLKQS Trigger: GGATTGTTTTAGATGAACCCATAGGGAAGAACGATG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR TCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGAGAAGAGTTATCTCCTaGCATCTTCATTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMRRVIS*HLHYFC Trigger: GCAGAAATAATGAAGATGTCAGGAGATAACTCTTCT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR GCA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGTGTTCCTCCTTTTGGTaGAGTTTATTTACGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQPKYTDVARKHFSANMCSSFW*SLFTVS Trigger: AGATACCGTAAATAAACTGCACCAAAAGGAGGAACA...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS CCA 90 bp | TCTGCCAGGAGCGTCCGCTCGGAGGCCGCCAAGCTCTCCTTCTCGTaGAGGAGCTGGATACACTCGGAGTCCGTGATGGCGCGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SARSVRSEAAKLSFS*RSWIHSESVMARQV Trigger: GACCTGCCGCGCCATCACGGACTCCGAGTGTATCCAGCTCCTCCACGAGAAGGAGAGCTTGGCGGCCTCCGAGCGGACGCTCCTGGCAGA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | ACCTGCAGGGTGGCCTCCAGGCTGGCGCTCAGCTTCTCCTGGCCCTaGCGCAGCGTGTCCTTCTCAAACTGCAGGTCTCGGTTGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TCRVASRLALSFSWP*RSVSFSNCRSRLVW Trigger: CCAGACCAACCGAGACCTGCAGTTTGAGAAGGACACGCTGCGCCAGGGCCAGGAGAAGCTGAGCGCCAGCCTGGAGGCCACCCTGCAGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 90 bp | AGGTCTGGAGCTGTCTCATATCCAGCTCCGCCTTCCTCAGCGCTTTaGTGGCACAGTCCAGCTGCGTGCGCAGGGTCTCCGCCTCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSGAVSYPAPPSSAL*WHSPAACAGSPPPC Trigger: GCACGGAGGCGGAGACCCTGCGCACGCAGCTGGACTGTGCCAGCAAAGCGCTGAGGAAGGCGGAGCTGGATATGAGACAGCTCCAGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 90 bp | ATATCCAGCTCCGCCTTCCTCAGCGCTTTGCTGGCACAGTCCAGCTaGGTGCGCAGGGTCTCCGCCTCCGTGCTGAGCAGCTGTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ISSSAFLSALLAQSS*VRRVSASVLSSCLT Trigger: GGTCAAACAGCTGCTCAGCACGGAGGCGGAGACCCTGCGCACGCAGCTGGACTGTGCCAGCAAAGCGCTGAGGAAGGCGGAGCTGGATAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | AGCGTCCGCTCGGAGGCCGCCAAGCTCTCCTTCTCGTGGAGGAGCTaGATACACTCGGAGTCCGTGATGGCGCGGCAGGTCTTAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVRSEAAKLSFSWRS*IHSESVMARQVLIS Trigger: AGAGATTAAGACCTGCCGCGCCATCACGGACTCCGAGTGTATCCAGCTCCTCCACGAGAAGGAGAGCTTGGCGGCCTCCGAGCGGACGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | GGATGGAGGGCCCGAGGCTTTCTCACTGGGTATTGTCTTCTCCACTaGAGCTGCAGCAGCAGCAGGCGTCTTCAAGGCTGTGCTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GWRARGFLTGYCLLH*SCSSSRRLQGCASR Trigger: CCGGGAAGCACAGCCTTGAAGACGCCTGCTGCTGCTGCAGCTCCAGTGGAGAAGACAATACCCAGTGAGAAAGCCTCGGGCCCTCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
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| CDS TCA 90 bp | TCACAGATCTCACAGTATGGCCGCTCCTCGCTCCGGCTGCCATGGTaGGTGGAATGGGGAGGATCTTCCGACATCTGTGCCTGGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQISQYGRSSLRLPW*VEWGGSSDICAWVG Trigger: TCCCACCCAGGCACAGATGTCGGAAGATCCTCCCCATTCCACTCACCATGGCAGCCGGAGCGAGGAGCGGCCATACTGTGAGATCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS CCA 90 bp | GCAGTTGGTTGCCCAGTGCCCAAACATCTCACAGATCTCACAGTATaGCCGCTCCTCGCTCCGGCTGCCATGGTGAGTGGAATGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVGCPVPKHLTDLTV*PLLAPAAMVSGMGR Trigger: CCTCCCCATTCCACTCACCATGGCAGCCGGAGCGAGGAGCGGCCATACTGTGAGATCTGTGAGATGTTTGGGCACTGGGCAACCAACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS TCA 90 bp | GGCTGGAGAAGAAGACACCATGGTAGCTGCAGCAGTGGACAGAGGTaGAGCAGTTCTCCCAGGAGCTGCCTGCAGGCCGTTGGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GWRRRHHGSCSSGQR*SSSPRSCLQAVGFI Trigger: GATGAAGCCAACGGCCTGCAGGCAGCTCCTGGGAGAACTGCTTCACCTCTGTCCACTGCTGCAGCTACCATGGTGTCTTCTTCTCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
||
| CDS TCA 90 bp | CCGACATGGCCATCAGCTTGTCCTTGCAGAAGCGGAGCTCCTCGATaGGCACCTGCATGCTCACCTTGGAGGCTTCCAGGGAGTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PTWPSACPCRSGAPR*APACSPWRLPGSRS Trigger: AGAACGACTCCCTGGAAGCCTCCAAGGTGAGCATGCAGGTGCTCATCGAGGAGCTCCGCTTCTGCAAGGACAAGCTGATGGCCATGTCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS TCA 90 bp | TGGCGACTTTCTGGCAGGCCACCTCCTTCTCGGAGGTTAAGTACGTaGTCTTCTCGTTCAGGCCCATCTCGAGCCGGGCCACCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WRLSGRPPPSRRLST*SSRSGPSRAGPPLL Trigger: CAGAAGAGGTGGCCCGGCTCGAGATGGGCCTGAACGAGAAGATCACGTACTTAACCTCCGAGAAGGAGGTGGCCTGCCAGAAAGTCGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 90 bp | TTGTTGTCCTGGAGCACCTCGGCCCTCTCTGTCAAGGCCACCTCGTaGTTCAGCCGCAGGTCATCCAGTATCTTGGTGAGGCAGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSWSTSALSVKATS*FSRRSSSILVRQLC Trigger: ACACAGCTGCCTCACCAAGATACTGGATGACCTGCGGCTGAACCACGAGGTGGCCTTGACAGAGAGGGCCGAGGTGCTCCAGGACAACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 90 bp | CTCAGCATCATCTCCCGTTTCTCAGCCAGGAGGTTCTTGTTGTCCTaGAGCACCTCGGCCCTCTCTGTCAAGGCCACCTCGTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSIISRFSARRFLLS*STSALSVKATSWFS Trigger: GCTGAACCACGAGGTGGCCTTGACAGAGAGGGCCGAGGTGCTCCAGGACAACAAGAACCTCCTGGCTGAGAAACGGGAGATGATGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCCTGTCCGGCTGGGTTaGCTGCTCACAGAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKPVRLG*LLTEEA Trigger: GGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCGTAGCTGGTCCATCTaGGCCTCTAGTTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVRSWSI*ASSSRT Trigger: TGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCGGTATCTTGCATCCTaGTCTGAGCAGAGACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVRYLAS*SEQRPP Trigger: AGGCGGTCTCTGCTCAGACAAGGATGCAAGATACCG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCTCGTCGTCATTGCAGTaGGTTGCCCAGTGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVSSSLQ*VAQCPN Trigger: GTTTGGGCACTGGGCAACCAACTGCAATGACGACGA...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS GCA 90 bp | CCGTTCTGCAGCTCCAGGGCCGACTTCTCCTTCAGGAGACTATCCTaGTGCTTTTTCAGCTTGGCGACTTTCTGGCAGGCCACCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFCSSRADFSFRRLS*CFFSLATFWQATSF Trigger: GAAGGAGGTGGCCTGCCAGAAAGTCGCCAAGCTGAAAAAGCAGCAGGATAGTCTCCTGAAGGAGAAGTCGGCCCTGGAGCTGCAGAACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | TCTCCCTGTCAGCAGCTTCCACCATGGTCCGTAGCTGGTCCATCTTaGCCTCTAGTTCCAGGACATGTAGTCCTGTCCGGCTGGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPCQQLPPWSVAGPS*PLVPGHVVLSGWVC Trigger: GCAAACCCAGCCGGACAGGACTACATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149410.2 |
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| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCCTTGCATTTGTTTGCTaGGTGTCCTCCAAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVLAFVC*VSSKEA Trigger: GGCCTCCTTGGAGGACACCAAGCAAACAAATGCAAG...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCAGGCGGGGTTTCTTCTaGGACTGCTTTTCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVRRGFF*DCFSWS Trigger: TGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCCT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS GCA 90 bp | TTCTGCAGCTCCAGGGCCGACTTCTCCTTCAGGAGACTATCCTGCTaGTTTTTCAGCTTGGCGACTTTCTGGCAGGCCACCTCCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FCSSRADFSFRRLSC*FFSLATFWQATSFS Trigger: CGAGAAGGAGGTGGCCTGCCAGAAAGTCGCCAAGCTGAAAAAGCAGCAGGATAGTCTCCTGAAGGAGAAGTCGGCCCTGGAGCTGCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | AGCTCCACTTTCTCCCTGTCAGCAGCTTCCACCATGGTCCGTAGCTaGTCCATCTTGGCCTCTAGTTCCAGGACATGTAGTCCTGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTFSLSAASTMVRS*SILASSSRTCSPVR Trigger: CCGGACAGGACTACATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGAAAGTGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149410.2 |
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| CDS-3UTR CAA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTACTCACAGCGGCGGCTTaGGCTTTGGCTGGGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: WKKALLRAGSAKRRAWGLLTAAA*ALAGVV Trigger: TACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAG...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCGTAGCTGGTCCATCTaGGCCTCTAGTTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDRSWSI*ASSSRT Trigger: TGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCATGATCTTCATCAGCTaGGCCTGCATGGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVMIFIS*ACMVSI Trigger: GATGGAGACCATGCAGGCCAAGCTGATGAAGATCAT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS TCA 90 bp | TCCGACCTTGAGCTCCCGCTCCCCCTTCTTGACAGAGCCAGCCTCTaGAAGGTTGGAGATCGACTCACTGGCAGTTTTTGTGAGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SDLELPLPLLDRASL*KVGDRLTGSFCEVA Trigger: AGCAACCTCACAAAAACTGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCGGGAGCTCAAGGTCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
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| CDS GCA 90 bp | GTTCTCCCAGGAGCTGCCTGCAGGCCGTTGGCTTCATCTTCTGCCTaGACCTTCCTCGTTAGCTTTGAAGGTCGGGTGAATATGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLPGAACRPLASSSA*TFLVSFEGRVNMPF Trigger: AAAGGGCATATTCACCCGACCTTCAAAGCTAACGAGGAAGGTGCAGGCAGAAGATGAAGCCAACGGCCTGCAGGCAGCTCCTGGGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS GCA 90 bp | AGCTCAAGCTTCACCTTATCAGACTCCAGTGTCTGCACAACTGAGTaGAGGGACTTGGCGGTGGCATTCTCTCCCCTGAGCACTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSSFTLSDSSVCTTE*RDLAVAFSPLSTVT Trigger: GGTCACAGTGCTCAGGGGAGAGAATGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGACACTGGAGTCTGATAAGGTGAAGCTTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS GCA 90 bp | TGGCGTCCTGAGCCTCTTTCAGCAACAAGGAGAGGTCGCACTTGCTaGTCGTCAGCTCCTGGTTCTCCTTCTTTCTTTCCTGCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WRPEPLSATRRGRTC*SSAPGSPSFFPAAP Trigger: AGGAGCTGCAGGAAAGAAAGAAGGAGAACCAGGAGCTGACGAGCAGCAAGTGCGACCTCTCCTTGTTGCTGAAAGAGGCTCAGGACGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | GGGCCGACTTCTCCTTCAGGAGACTATCCTGCTGCTTTTTCAGCTTaGCGACTTTCTGGCAGGCCACCTCCTTCTCGGAGGTTAAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: GPTSPSGDYPAAFSA*RLSGRPPPSRRLST Trigger: CGTACTTAACCTCCGAGAAGGAGGTGGCCTGCCAGAAAGTCGCCAAGCTGAAAAAGCAGCAGGATAGTCTCCTGAAGGAGAAGTCGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACCTGTCCGGCTGGGTTaGCTGCTCACAGAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSPVRLG*LLTEEA Trigger: GGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATATGTTTTCTGGCTGCTaGCTGCTGACTCTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDMFSGC*LLTLLS Trigger: GCTGAGCAGAGTCAGCAGCAAGCAGCCAGAAAACAT...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS TCA 90 bp | CTTGAGCTCAAGCTTCACCTTATCAGACTCCAGTGTCTGCACAACTaGGTGCAGGGACTTGGCGGTGGCATTCTCTCCCCTGAGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LELKLHLIRLQCLHN*VQGLGGGILSPEHC Trigger: ACAGTGCTCAGGGGAGAGAATGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGACACTGGAGTCTGATAAGGTGAAGCTTGAGCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS GCA 90 bp | ATGGTCTTGATAGAACTTTCCCTGTCAGCGAGCAGATCTCCGTTCTaGAGCTCCAGGGCCGACTTCTCCTTCAGGAGACTATCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MVLIELSLSASRSPF*SSRADFSFRRLSCC Trigger: GCAGCAGGATAGTCTCCTGAAGGAGAAGTCGGCCCTGGAGCTGCAGAACGGAGATCTGCTCGCTGACAGGGAAAGTTCTATCAAGACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | TCCAACTCGAAAGTCATCCACAAACTCCTCTTGGGTCTCGGAGGATaGAGGGCCCGAGGCTTTCTCACTGGGTATTGTCTTCTCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SNSKVIHKLLLGLGG*RARGFLTGYCLLHW Trigger: CCAGTGGAGAAGACAATACCCAGTGAGAAAGCCTCGGGCCCTCCATCCTCCGAGACCCAAGAGGAGTTTGTGGATGACTTTCGAGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CCA 90 bp | GTCTTAATCTCTTCCAGGAGTTTGGTGAGGCTGGAGTTCGAGGTCTaGAGCTGTCTCATATCCAGCTCCGCCTTCCTCAGCGCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLISSRSLVRLEFEV*SCLISSSAFLSALL Trigger: CAGCAAAGCGCTGAGGAAGGCGGAGCTGGATATGAGACAGCTCCAGACCTCGAACTCCAGCCTCACCAAACTCCTGGAAGAGATTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | ACCCTCAGCCTCTGTATCTCTTCCTCCAGGAGCACTACTCTCCCATaGAGCTTGTTGTTCTCGTACAAAGAGGTCTCGCTCTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLCISSSRSTTLP*SLLFSYKEVSLSLA Trigger: GGCCAAGGAGAGCGAGACCTCTTTGTACGAGAACAACAAGCTCCATGGGAGAGTAGTGCTCCTGGAGGAAGAGATACAGAGGCTGAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS-3UTR CAA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCTTTCTCACTGGGTATaGTCTTCTCCACTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDLSHWV*SSPLEL Trigger: CAGCTCCAGTGGAGAAGACAATACCCAGTGAGAAAG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CAA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATACGGGAAGCCAATCTTaGTCACTTTGTGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDTGSQS*SLCGQE Trigger: CTCCTGTCCACAAAGTGACAAAGATTGGCTTCCCGT...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCCCTGTCCGGCTGGGTTaGCTGCTCACAGAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFPVRLG*LLTEEA Trigger: GGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGG...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTACGTAGCTGGTCCATCTaGGCCTCTAGTTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: WKKALLRAGSAKRRAWGLRSWSI*ASSSRT Trigger: TGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACG...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTCGGTATCTTGCATCCTaGTCTGAGCAGAGACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCRYLAS*SEQRPP Trigger: AGGCGGTCTCTGCTCAGACAAGGATGCAAGATACCG...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCTCTGTAGTCTTGCATTaGTTTGCTTGGTGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVSVVLH*FAWCPP Trigger: TGGAGGACACCAAGCAAACAAATGCAAGACTACAGA...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS GCA 90 bp | ACCTGCATGCTCACCTTGGAGGCTTCCAGGGAGTCGTTCTCCATGTaGATCTTCAGGAGTTCTTCCTGGGCAGCGTTGATCTCCTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TCMLTLEASRESFSM*IFRSSSWAALISLS Trigger: ACTTAAGGAGATCAACGCTGCCCAGGAAGAACTCCTGAAGATGCACATGGAGAACGACTCCCTGGAAGCCTCCAAGGTGAGCATGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 90 bp | TCGCACTTGCTGCTCGTCAGCTCCTGGTTCTCCTTCTTTCTTTCCTaGAGCTCCTTCTTGAGGGCATCGATGTTACCGAGCAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SHLLLVSSWFSFFLS*SSFLRASMLPSSFI Trigger: GATGAAGCTGCTCGGTAACATCGATGCCCTCAAGAAGGAGCTGCAGGAAAGAAAGAAGGAGAACCAGGAGCTGACGAGCAGCAAGTGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | ACCCAAACACGTTCTCCAACTCGAAAGTCATCCACAAACTCCTCTTaGGTCTCGGAGGATGGAGGGCCCGAGGCTTTCTCACTGGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TQTRSPTRKSSTNSS*VSEDGGPEAFSLGI Trigger: AATACCCAGTGAGAAAGCCTCGGGCCCTCCATCCTCCGAGACCCAAGAGGAGTTTGTGGATGACTTTCGAGTTGGAGAACGTGTTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CCA 90 bp | TCTTTCAGCAACAAGGAGAGGTCGCACTTGCTGCTCGTCAGCTCCTaGTTCTCCTTCTTTCTTTCCTGCAGCTCCTTCTTGAGGGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSNKERSHLLLVSS*FSFFLSCSSFLRAS Trigger: CGATGCCCTCAAGAAGGAGCTGCAGGAAAGAAAGAAGGAGAACCAGGAGCTGACGAGCAGCAAGTGCGACCTCTCCTTGTTGCTGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | GGAGCTTGTTGTTCTCGTACAAAGAGGTCTCGCTCTCCTTGGCCCTaGCCTCCTTCTCCAGGATTAACGTCTGCTGGATTTCCCGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: GACCSRTKRSRSPWP*PPSPGLTSAGFPES Trigger: AGATTCGGGAAATCCAGCAGACGTTAATCCTGGAGAAGGAGGCCAGGGCCAAGGAGAGCGAGACCTCTTTGTACGAGAACAACAAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS-3UTR CAA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCTTTCTCACTGGGTATaGTCTTCTCCACTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DKDDSWNLTAETTAEPILLSHWV*SSPLEL Trigger: CAGCTCCAGTGGAGAAGACAATACCCAGTGAGAAAG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCAGGGACTCGTTCTCTTTGGAAAGCTTCTCAGTGGCCGTGTGCAGAGCCGTTTGTGGGGAATATTaGAGGGAGTGGCTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRDSFSLESFSVAVCRAVCGEY*REWLEK Trigger: CTTCTCCAGCCACTCCCTCAAATATTCCCCACAAAC...GGCTCTGCACACGGCCACTGAGAAGCTTTCCAAAGAGAACGAGTCCCTGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
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| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCCAGCCTCTGAAAGGTaGGAGATCGACTCACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRPASER*EIDSLA Trigger: TGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTGG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACTCACAGCGGCGGCTTaGGCTTTGGCTGGGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSLTAAA*ALAGVV Trigger: TACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCCTGTCCGGCTGGGTTaGCTGCTCACAGAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTPVRLG*LLTEEA Trigger: GGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGATGGCGGTCTCCAGTTaGGACTTCCATAGAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: DKDDSWNLTAETTAEPILMAVSS*DFHRAI Trigger: GATAGCTCTATGGAAGTCCAAACTGGAGACCGCCAT...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCGACACTGGTTGTAGCTaGTTTCCATCTTCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVDTGCS*FPSSFP Trigger: TGGAAAAGAAGATGGAAACAAGCTACAACCAGTGTC...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGGCGGGGTTTCTTCTaGGACTGCTTTTCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKRRGFF*DCFSWS Trigger: TGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCCT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS TCA 90 bp | TCAAGGCCACCTCGTGGTTCAGCCGCAGGTCATCCAGTATCTTGGTaGGGCAGCTGTGTAGTTCTTGCAGTTCCAACTTGGACTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRPPRGSAAGHPVSW*GSCVVLAVPTWTWK Trigger: TTTCCAAGTCCAAGTTGGAACTGCAAGAACTACACAGCTGCCTCACCAAGATACTGGATGACCTGCGGCTGAACCACGAGGTGGCCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS GCA 90 bp | GCGTCCTTCTCTGTGAGCAAGGCACTGGTGAGGCTGATCGACTTCTaGAAGGAGGCTTTCTCTTCATCGGCGTCTTTTCTGAACTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASFSVSKALVRLIDF*KEAFSSSASFLNSD Trigger: ATCTGAGTTCAGAAAAGACGCCGATGAAGAGAAAGCCTCCTTGCAGAAGTCGATCAGCCTCACCAGTGCCTTGCTCACAGAGAAGGACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS GCA 90 bp | TTTTTGACCTTGAGCTCAAGCTTCACCTTATCAGACTCCAGTGTCTaGACAACTGAGTGCAGGGACTTGGCGGTGGCATTCTCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLTLSSSFTLSDSSV*TTECRDLAVAFSPL Trigger: CAGGGGAGAGAATGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGACACTGGAGTCTGATAAGGTGAAGCTTGAGCTCAAGGTCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS GCA 90 bp | AGCCGCAGGTCATCCAGTATCTTGGTGAGGCAGCTGTGTAGTTCTTaGAGTTCCAACTTGGACTTGGAAAGGGCAGCGAAGTCGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRSSSILVRQLCSS*SSNLDLERAAKSLL Trigger: CAAAAGCGACTTCGCTGCCCTTTCCAAGTCCAAGTTGGAACTGCAAGAACTACACAGCTGCCTCACCAAGATACTGGATGACCTGCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 90 bp | GCTTCCAGGGAGTCGTTCTCCATGTGCATCTTCAGGAGTTCTTCCTaGGCAGCGTTGATCTCCTTAAGTAGTTTCTCTCTCTCGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ASRESFSMCIFRSSS*AALISLSSFSLSAT Trigger: AGTGGCCGAGAGAGAGAAACTACTTAAGGAGATCAACGCTGCCCAGGAAGAACTCCTGAAGATGCACATGGAGAACGACTCCCTGGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | TCCTTCAGGAGACTATCCTGCTGCTTTTTCAGCTTGGCGACTTTCTaGCAGGCCACCTCCTTCTCGGAGGTTAAGTACGTGATCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SFRRLSCCFFSLATF*QATSFSEVKYVIFS Trigger: CGAGAAGATCACGTACTTAACCTCCGAGAAGGAGGTGGCCTGCCAGAAAGTCGCCAAGCTGAAAAAGCAGCAGGATAGTCTCCTGAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGGTGGGATGCTATGGCGGTCTCCAGTTTGGACTTCCATAGAGCTATCACTTTCTCACTGGGTATaGTCTTCTCCACTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAGGMLWRSPVWTSIELSLSHWV*SSPLEL Trigger: CAGCTCCAGTGGAGAAGACAATACCCAGTGAGAAAG...TGATAGCTCTATGGAAGTCCAAACTGGAGACCGCCATAGCATCCCACCAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144121.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTATGGCGGTCTCCAGTTaGGACTTCCATAGAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCMAVSS*DFHRAI Trigger: GATAGCTCTATGGAAGTCCAAACTGGAGACCGCCAT...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCTTTGTTCAGTGTACTaGGCCTGCAGAACCTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKLCSVY*ACRTSS Trigger: GCTAGAGGTTCTGCAGGCCAAGTACACTGAACAAAG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTAACCAATGACCTCGCTTaGTTCAGTGTACTTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WKKALLRAGSAKRRAWGLTNDLA*FSVLGL Trigger: CAGGCCAAGTACACTGAACAAAGCGAGGTCATTGGT...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
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| CDS-3UTR CAA 90 bp | GATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGGGCCCAGTCAAACTGTTCCTCCTTTaGGTGCAGTTTATTTACGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSWNLTAETTAEPILGPVKLFLL*VQFIYG Trigger: ACCGTAAATAAACTGCACCAAAAGGAGGAACAGTTT...GACTGGGCCCAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATTCTGTAGTCTTGCATTaGTTTGCTTGGTGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDSVVLH*FAWCPP Trigger: TGGAGGACACCAAGCAAACAAATGCAAGACTACAGA...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCTTTCTCACTGGGTATaGTCTTCTCCACTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRLSHWV*SSPLEL Trigger: CAGCTCCAGTGGAGAAGACAATACCCAGTGAGAAAG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
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| CDS-3UTR CAA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCCAATCTTTGTCACTTaGTGGACAGGAGCGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: DKDDSWNLTAETTAEPILPIFVT*WTGANN Trigger: ATTGTTCGCTCCTGTCCACAAAGTGACAAAGATTGG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCTCACAGCGGCGGCTTaGGCTTTGGCTGGGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNLTAAA*ALAGVV Trigger: TACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACGTAGCTGGTCCATCTaGGCCTCTAGTTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSRSWSI*ASSSRT Trigger: TGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGTTTACCTTCGGAATaGGCTTTCCGAAGCGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKSLPSE*AFRSAS Trigger: TGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAACT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
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| CDS-3UTR CAA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTAAGTTTACCTTCGGAATaGGCTTTCCGAAGCGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: WKKALLRAGSAKRRAWGLSLPSE*AFRSAS Trigger: TGATGCGCTTCGGAAAGCCAATTCCGAAGGTAAACT...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
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| CDS-3UTR CAA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGAGGAAATCAATCATTaGCTGACTCTCCTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCEEINH*LTLLGS Trigger: AGAGCCCAGGAGAGTCAGCAAATGATTGATTTCCTC...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGGAGGAAATCAATCATTaGCTGACTCTCCTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKEEINH*LTLLGS Trigger: AGAGCCCAGGAGAGTCAGCAAATGATTGATTTCCTC...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137363.8 |
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| CDS TCA 90 bp | AGGATTAACGTCTGCTGGATTTCCCGAATCTCCTCGTTTAGCTTCTaGCACTCTTCCTGCAGGTTCAGGCCATCCCTCAGCAACATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RINVCWISRISSFSF*HSSCRFRPSLSNMF Trigger: GAACATGTTGCTGAGGGATGGCCTGAACCTGCAGGAAGAGTGTCAGAAGCTAAACGAGGAGATTCGGGAAATCCAGCAGACGTTAATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | GTTAGCTTTGAAGGTCGGGTGAATATGCCCTTTAAAGGTTCACACTaGAAATACCGCACTCCCGCCACAGAGCCATCGTTCTTCCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: VSFEGRVNMPFKGSH*KYRTPATEPSFFPM Trigger: CATAGGGAAGAACGATGGCTCTGTGGCGGGAGTGCGGTATTTCCAGTGTGAACCTTTAAAGGGCATATTCACCCGACCTTCAAAGCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAATGTTTTCTGGCTGCTaGCTGCTGACTCTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSMFSGC*LLTLLS Trigger: GCTGAGCAGAGTCAGCAGCAAGCAGCCAGAAAACAT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCACTTGCATTTGTTTGCTaGGTGTCCTCCAAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSLAFVC*VSSKEA Trigger: GGCCTCCTTGGAGGACACCAAGCAAACAAATGCAAG...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCTTGTTCTCCTTGAGTaGAAGTTCCAAGTTTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDLVLLE*KFQVFD Trigger: GTCAAAAACTTGGAACTTCAACTCAAGGAGAACAAG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CACCGCAGAGCCCATCTTGGGCCCAGTCAGTCACATGCTGGTGAGCCTTTAGATCTTCATCTTGAGGTCTaGGTTCTTTCTTTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: HRRAHLGPSQSHAGEPLDLHLEV*VLSLKI Trigger: GATCTTCAAAGAAAGAACCAAGACCTCAAGATGAAG...ATCTAAAGGCTCACCAGCATGTGACTGACTGGGCCCAAGATGGGCTCTGCGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGATCTCCACCTTCATCTaGAGGTCTTGGTTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DKDDSWNLTAETTAEPILISTFI*RSWFFL Trigger: AAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGAT...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCTCGTCGTCATTGCAGTaGGTTGCCCAGTGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFSSSLQ*VAQCPN Trigger: GTTTGGGCACTGGGCAACCAACTGCAATGACGACGA...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCGGGCATGCTCCAGTTaGGTCTGCGTCTCAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTRACSS*VCVSRS Trigger: CGATCTTGAGACGCAGACCAAACTGGAGCATGCCCG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCGGGCATGCTCCAGTTaGGTCTGCGTCTCAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNRACSS*VCVSRS Trigger: CGATCTTGAGACGCAGACCAAACTGGAGCATGCCCG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
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| CDS TCA 90 bp | AGGTTGGAGATCGACTCACTGGCAGTTTTTGTGAGGTTGCTAATTTaGGGTGTAGCCGAAGGTTCTTTTGCCGTTGACTGGGACGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLEIDSLAVFVRLLI*GVAEGSFAVDWDGL Trigger: CAAACCGTCCCAGTCAACGGCAAAAGAACCTTCGGCTACACCTCAAATTAGCAACCTCACAAAAACTGCCAGTGAGTCGATCTCCAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
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| CDS GCA 90 bp | TCCTGGAGCTCTTTGGTAATGCTATTAGCCTTAATCTCCGCCTCCTaGAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWSSLVMLLALISAS*SLFSVSSISTRCWS Trigger: AGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGGCTAATAGCATTACCAAAGAGCTCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111564.8 ENSMUST00000149410.2 |
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| CDS GCA 90 bp | TGTTTTCTCTTTGGTCATCTGTTCCATGATCTGCATGGCGTCTTCTaGAGTCTGAGCAGCCGTGAACGAATGAAGGGTCTCAAGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CFLFGHLFHDLHGVF*SLSSRERMKGLKLS Trigger: AGAGAGCTTGAGACCCTTCATTCGTTCACGGCTGCTCAGACTGCAGAAGACGCCATGCAGATCATGGAACAGATGACCAAAGAGAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 90 bp | TCCTTAATGATCTCCTCCACCTTCTGCTCTGAGTTGGTCTTCTCTTaGGTAAGTGTGAAATTCTCAGTTTGGAGCTGCTCGCTGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: SLMISSTFCSELVFS*VSVKFSVWSCSLHT Trigger: GGTGTGCAGCGAGCAGCTCCAAACTGAGAATTTCACACTTACCCAAGAGAAGACCAACTCAGAGCAGAAGGTGGAGGAGATCATTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAGTTTGTGGGGAATATTaGAGGGAGTGGCTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSVCGEY*REWLEK Trigger: CTTCTCCAGCCACTCCCTCAAATATTCCCCACAAAC...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCCAATCTTTGTCACTTaGTGGACAGGAGCGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRPIFVT*WTGANN Trigger: ATTGTTCGCTCCTGTCCACAAAGTGACAAAGATTGG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACTCACAGCGGCGGCTTaGGCTTTGGCTGGGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKLTAAA*ALAGVV Trigger: TACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCAAAGCACTTATTTCTaGCAAAAGGGAGAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: DKDDSWNLTAETTAEPILQSTYF*QKGERH Trigger: ATGTCTCTCTCCCTTTTGCAAGAAATAAGTGCTTTG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAATGATCTTCATCAGCTaGGCCTGCATGGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSMIFIS*ACMVSI Trigger: GATGGAGACCATGCAGGCCAAGCTGATGAAGATCAT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCGGTATCTTGCATCCTaGTCTGAGCAGAGACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNRYLAS*SEQRPP Trigger: AGGCGGTCTCTGCTCAGACAAGGATGCAAGATACCG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGACACTGGTTGTAGCTaGTTTCCATCTTCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCDTGCS*FPSSFP Trigger: TGGAAAAGAAGATGGAAACAAGCTACAACCAGTGTC...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGGACACTGGTTGTAGCTaGTTTCCATCTTCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKDTGCS*FPSSFP Trigger: TGGAAAAGAAGATGGAAACAAGCTACAACCAGTGTC...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGCAGTTCTTTTGACTaGTTCAGCTCTTCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKSSSFD*FSSSTV Trigger: AACTGTGGAAGAGCTGAACAAGTCAAAAGAACTGCT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTAAGCAGTTCTTTTGACTaGTTCAGCTCTTCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WKKALLRAGSAKRRAWGLSSSFD*FSSSTV Trigger: AACTGTGGAAGAGCTGAACAAGTCAAAAGAACTGCT...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGTCCAAGTTTTTGACCTaGAGCTCAAGCTTCACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKSKFLT*SSSFTL Trigger: TAAGGTGAAGCTTGAGCTCAAGGTCAAAAACTTGGA...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCTTCATCTTGAGGTCTaGGTTCTTTCTTTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: DKDDSWNLTAETTAEPILLHLEV*VLSLKI Trigger: GATCTTCAAAGAAAGAACCAAGACCTCAAGATGAAG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGATCTCCACCTTCATCTaGAGGTCTTGGTTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKISTFI*RSWFFL Trigger: AAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGAT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS TCA 90 bp | ATTTACGGTATCTTGCATCCTTGTCTGAGCAGAGACCGCCTCCTCTaGAGTACTGGCAAACTTTTCTTTCTTAATCTCCGCCTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IYGILHPCLSRDRLL*STGKLFFLNLRLLQ Trigger: CTGCAGGAGGCGGAGATTAAGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGATGCAAGATACCGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
||
| CDS GCA 90 bp | GTCATCACTGTCATAACTGTTCAGGTCTTCCCCGTTGCCATTGAGTaGAGCTTCAGACATCATCTCCACCTTCATCTTGAGGTCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VITVITVQVFPVAIE*SFRHHLHLHLEVLV Trigger: AACCAAGACCTCAAGATGAAGGTGGAGATGATGTCTGAAGCTGCACTCAATGGCAACGGGGAAGACCTGAACAGTTATGACAGTGATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
||
| CDS GCA 90 bp | TCCTTCTTGAGGGCATCGATGTTACCGAGCAGCTTCATCTTCTCCTaGATAACAATCCGCCTGTTTGTAGCCTCTTGGTCATACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFLRASMLPSSFIFS*ITIRLFVASWSYFL Trigger: AAGGAAGTATGACCAAGAGGCTACAAACAGGCGGATTGTTATGCAGGAGAAGATGAAGCTGCTCGGTAACATCGATGCCCTCAAGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 90 bp | GGTCAAAGCAGTCACAGATGTCACAGAAGAGGCGGGGTTTCTTCTTaGACTGCTTTTCCTGGTCATCACTGTCATAACTGTTCAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQSSHRCHRRGGVSS*TAFPGHHCHNCSGL Trigger: AAGACCTGAACAGTTATGACAGTGATGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCCTCTTCTGTGACATCTGTGACTGCTTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGACGATAGCTGGAACCTCACAGCAGAGACCACCGCAGAGCCCATCTTGCAATCCATATTTGGGTaGACACTGAAAATACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DKDDSWNLTAETTAEPILQSIFG*TLKIPC Trigger: ACAAGGTATTTTCAGTGTCAACCCAAATATGGATTG...CAAGATGGGCTCTGCGGTGGTCTCTGCTGTGAGGTTCCAGCTATCGTCTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCACGGGAAGCCAATCTTaGTCACTTTGTGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFTGSQS*SLCGQE Trigger: CTCCTGTCCACAAAGTGACAAAGATTGGCTTCCCGT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCCTGTCCGGCTGGGTTaGCTGCTCACAGAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMPVRLG*LLTEEA Trigger: GGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTAAAACTGTTCCTCCTTTaGGTGCAGTTTATTTACGGT | + |
|
Preference number: 5 (lower is better) Translates to: WKKALLRAGSAKRRAWGLKLFLL*VQFIYG Trigger: ACCGTAAATAAACTGCACCAAAAGGAGGAACAGTTT...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCTTGCATTTGTTTGCTaGGTGTCCTCCAAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNLAFVC*VSSKEA Trigger: GGCCTCCTTGGAGGACACCAAGCAAACAAATGCAAG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTTCCACAGTTTTCAAGTaGTTTTCCTTAAGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCSTVFK*FSLSVS Trigger: GGACACACTTAAGGAAAACAACTTGAAAACTGTGGA...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGAGAAGAGCTTGGGGTTTATCCACAGTTTTCAAGTaGTTTTCCTTAAGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKKALLRAGSAKRRAWGLSTVFK*FSLSVS Trigger: GGACACACTTAAGGAAAACAACTTGAAAACTGTGGA...TAAACCCCAAGCTCTTCTCTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAGCAGTTCTTTTGACTaGTTCAGCTCTTCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSSSFD*FSSSTV Trigger: AACTGTGGAAGAGCTGAACAAGTCAAAAGAACTGCT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCTTGTTCTCCTTGAGTaGAAGTTCCAAGTTTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKLVLLE*KFQVFD Trigger: GTCAAAAACTTGGAACTTCAACTCAAGGAGAACAAG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGCTTCATCTTGAGGTCTaGGTTCTTTCTTTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKLHLEV*VLSLKI Trigger: GATCTTCAAAGAAAGAACCAAGACCTCAAGATGAAG...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAGGCGGGGTTTCTTCTaGGACTGCTTTTCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTRRGFF*DCFSWS Trigger: TGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCCT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGTCTCAAGATCGCCTTaGGTAATTGATTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCVSRSP*VIDSSS Trigger: TGAAGAAGAATCAATTACCAAAGGCGATCTTGAGAC...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGTATTGTCAAGCCTGGAAAAAGGCCCTCCTGAGAGCAGGGAGTGCGAAGACCTCAAGATCGCCTTaGGTAATTGATTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PKYCQAWKKALLRAGSAKTSRSP*VIDSSS Trigger: TGAAGAAGAATCAATTACCAAAGGCGATCTTGAGGT...CTTCGCACTCCCTGCTCTCAGGAGGGCCTTTTTCCAGGCTTGACAATACTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCGTTTGTGGGGAATATTaGAGGGAGTGGCTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTVCGEY*REWLEK Trigger: CTTCTCCAGCCACTCCCTCAAATATTCCCCACAAAC...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACGTTTGTGGGGAATATTaGAGGGAGTGGCTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNVCGEY*REWLEK Trigger: CTTCTCCAGCCACTCCCTCAAATATTCCCCACAAAC...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACACGGGAAGCCAATCTTaGTCACTTTGTGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNTGSQS*SLCGQE Trigger: CTCCTGTCCACAAAGTGACAAAGATTGGCTTCCCGT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCAAAGCACTTATTTCTaGCAAAAGGGAGAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRQSTYF*QKGERH Trigger: ATGTCTCTCTCCCTTTTGCAAGAAATAAGTGCTTTG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACATGATCTTCATCAGCTaGGCCTGCATGGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNMIFIS*ACMVSI Trigger: GATGGAGACCATGCAGGCCAAGCTGATGAAGATCAT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCTTTGTTCAGTGTACTaGGCCTGCAGAACCTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNLCSVY*ACRTSS Trigger: GCTAGAGGTTCTGCAGGCCAAGTACACTGAACAAAG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACACCAATGACCTCGCTTaGTTCAGTGTACTTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNTNDLA*FSVLGL Trigger: CAGGCCAAGTACACTGAACAAAGCGAGGTCATTGGT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATTCTCCTGGAGCTCTTaGGTAATGCTATTAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSFSWSS*VMLLAL Trigger: CAAGGCTAATAGCATTACCAAAGAGCTCCAGGAGAA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAAACTGTTCCTCCTTTaGGTGCAGTTTATTTACGGT | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRKLFLL*VQFIYG Trigger: ACCGTAAATAAACTGCACCAAAAGGAGGAACAGTTT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGAACTGTATTCATTCTGTAGTCTaGCATTTGTTTGCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPGSHLSQRVSLGTNRNCIHSVV*HLFAWC Trigger: ACACCAAGCAAACAAATGCAAGACTACAGAATGAAT...ACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCGTCGTCATTGCAGTaGGTTGCCCAGTGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKSSSLQ*VAQCPN Trigger: GTTTGGGCACTGGGCAACCAACTGCAATGACGACGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGGTCTCAAGATCGCCTTaGGTAATTGATTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRVSRSP*VIDSSS Trigger: TGAAGAAGAATCAATTACCAAAGGCGATCTTGAGAC...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGTCCACTATTACCGAGTaGAGGAAATCAATCATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRSTITE*RKSIIC Trigger: GCAAATGATTGATTTCCTCAACTCGGTAATAGTGGA...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
||
| CDS TCA 90 bp | ACTCAGGAGCTCCTTTTCCTTAATGATCTCCTCCACCTTCTGCTCTaGGTTGGTCTTCTCTTGGGTAAGTGTGAAATTCTCAGTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQELLFLNDLLHLLL*VGLLLGKCEILSLE Trigger: CTCCAAACTGAGAATTTCACACTTACCCAAGAGAAGACCAACTCAGAGCAGAAGGTGGAGGAGATCATTAAGGAAAAGGAGCTCCTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGCAATCCATATTTGGGTaGACACTGAAAATACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRQSIFG*TLKIPC Trigger: ACAAGGTATTTTCAGTGTCAACCCAAATATGGATTG...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCTCACAGCGGCGGCTTaGGCTTTGGCTGGGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMLTAAA*ALAGVV Trigger: TACTACCCCAGCCAAAGCCAAAGCCGCCGCTGTGAG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAATGTTTTCTGGCTGCTaGCTGCTGACTCTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKMFSGC*LLTLLS Trigger: GCTGAGCAGAGTCAGCAGCAAGCAGCCAGAAAACAT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | AAGATACTGCCAGGGTCCCACTTGTCCCAGAGGGTTTCTCTAGGAACAAACAGGATTCATTCTGTAGTCTaGCATTTGTTTGCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KILPGSHLSQRVSLGTNRIHSVV*HLFAWC Trigger: ACACCAAGCAAACAAATGCAAGACTACAGAATGAAT...CCTGTTTGTTCCTAGAGAAACCCTCTGGGACAAGTGGGACCCTGGCAGTATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCATCCAAGTTTTTGACCTaGAGCTCAAGCTTCACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSSKFLT*SSSFTL Trigger: TAAGGTGAAGCTTGAGCTCAAGGTCAAAAACTTGGA...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAATCTCCACCTTCATCTaGAGGTCTTGGTTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSISTFI*RSWFFL Trigger: AAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGAT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS TCA 90 bp | AAGTGGAGGGTTTCGTTTACCGACCAGAGTTTCTGCTGGTCTTCCTaGAGCAAAGTGATCTTGGTCTCCACTTCTATCAGCTTTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: KWRVSFTDQSFCWSS*SKVILVSTSISFDK Trigger: TTTATCAAAGCTGATAGAAGTGGAGACCAAGATCACTTTGCTTCAGGAAGACCAGCAGAAACTCTGGTCGGTAAACGAAACCCTCCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTATCCACAAACTCCTCTaGGGTCTCGGAGGATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIIHKLL*GLGGWR Trigger: CCTCCATCCTCCGAGACCCAAGAGGAGTTTGTGGAT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAACGGGAAGCCAATCTTaGTCACTTTGTGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKTGSQS*SLCGQE Trigger: CTCCTGTCCACAAAGTGACAAAGATTGGCTTCCCGT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAAATGGCGGTCTCCAGTTaGGACTTCCATAGAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKMAVSS*DFHRAI Trigger: GATAGCTCTATGGAAGTCCAAACTGGAGACCGCCAT...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCGGTATCTTGCATCCTaGTCTGAGCAGAGACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIRYLAS*SEQRPP Trigger: AGGCGGTCTCTGCTCAGACAAGGATGCAAGATACCG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTCTGTAGTCTTGCATTaGTTTGCTTGGTGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSVVLH*FAWCPP Trigger: TGGAGGACACCAAGCAAACAAATGCAAGACTACAGA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCTCTGTAGTCTTGCATTaGTTTGCTTGGTGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTSVVLH*FAWCPP Trigger: TGGAGGACACCAAGCAAACAAATGCAAGACTACAGA...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GCACACTGCGTGGAGGTGCATGTGGCTCCTTTTTACATATTCTCAAAGACATTCATCTCCACCTTCATCTaGAGGTCTTGGTTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AHCVEVHVAPFYIFSKTFISTFI*RSWFFL Trigger: AAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGAT...GAATGTCTTTGAGAATATGTAAAAAGGAGCCACATGCACCTCCACGCAGTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCGGGCATGCTCCAGTTaGGTCTGCGTCTCAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMRACSS*VCVSRS Trigger: CGATCTTGAGACGCAGACCAAACTGGAGCATGCCCG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCCAGCCTCTGAAAGGTaGGAGATCGACTCACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QQQPKYTDVARKHFSANMPASER*EIDSLA Trigger: TGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTGG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCGTAGCTGGTCCATCTaGGCCTCTAGTTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QQQPKYTDVARKHFSANMRSWSI*ASSSRT Trigger: TGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCCAAGAGCTTTTCTTaGACAGCACTGAGCTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKSKSFS*TALSCD Trigger: ATCGCAGCTCAGTGCTGTCAAAGAAAAGCTCTTGGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCGACACTGGTTGTAGCTaGTTTCCATCTTCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTDTGCS*FPSSFP Trigger: TGGAAAAGAAGATGGAAACAAGCTACAACCAGTGTC...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCTTGCATTTGTTTGCTaGGTGTCCTCCAAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIILAFVC*VSSKEA Trigger: GGCCTCCTTGGAGGACACCAAGCAAACAAATGCAAG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CATATTCTCAAAGACATTCAAGTGAAGACAGAGAGACGCAGACTGGCGGGGTCAATTCATTCTGTAGTCTaGCATTTGTTTGCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HILKDIQVKTERRRLAGSIHSVV*HLFAWC Trigger: ACACCAAGCAAACAAATGCAAGACTACAGAATGAAT...TGACCCCGCCAGTCTGCGTCTCTCTGTCTTCACTTGAATGTCTTTGAGAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAGCAGTTCTTTTGACTaGTTCAGCTCTTCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTSSSFD*FSSSTV Trigger: AACTGTGGAAGAGCTGAACAAGTCAAAAGAACTGCT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACTCCAAGTTTTTGACCTaGAGCTCAAGCTTCACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNSKFLT*SSSFTL Trigger: TAAGGTGAAGCTTGAGCTCAAGGTCAAAAACTTGGA...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCATCTCCACCTTCATCTaGAGGTCTTGGTTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTISTFI*RSWFFL Trigger: AAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGAT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTCGTCGTCATTGCAGTaGGTTGCCCAGTGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMSSSLQ*VAQCPN Trigger: GTTTGGGCACTGGGCAACCAACTGCAATGACGACGA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS TCA 90 bp | TTTCGTTTACCGACCAGAGTTTCTGCTGGTCTTCCTGAAGCAAAGTaGTCTTGGTCTCCACTTCTATCAGCTTTGATAAAAGAGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: FRLPTRVSAGLPEAK*SWSPLLSALIKENL Trigger: AAGGTTCTCTTTTATCAAAGCTGATAGAAGTGGAGACCAAGATCACTTTGCTTCAGGAAGACCAGCAGAAACTCTGGTCGGTAAACGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACCAATCTTTGTCACTTaGTGGACAGGAGCGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKPIFVT*WTGANN Trigger: ATTGTTCGCTCCTGTCCACAAAGTGACAAAGATTGG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTACGGGAAGCCAATCTTaGTCACTTTGTGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIITGSQS*SLCGQE Trigger: CTCCTGTCCACAAAGTGACAAAGATTGGCTTCCCGT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACCAAAGCACTTATTTCTaGCAAAAGGGAGAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNQSTYF*QKGERH Trigger: ATGTCTCTCTCCCTTTTGCAAGAAATAAGTGCTTTG...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTATGGCGGTCTCCAGTTaGGACTTCCATAGAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIMAVSS*DFHRAI Trigger: GATAGCTCTATGGAAGTCCAAACTGGAGACCGCCAT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTATGATCTTCATCAGCTaGGCCTGCATGGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIMIFIS*ACMVSI Trigger: GATGGAGACCATGCAGGCCAAGCTGATGAAGATCAT...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACTGTTCCTCCTTTaGGTGCAGTTTATTTACGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTKLFLL*VQFIYG Trigger: ACCGTAAATAAACTGCACCAAAAGGAGGAACAGTTT...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGATGTTTTCTGGCTGCTaGCTGCTGACTCTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QQQPKYTDVARKHFSANMMFSGC*LLTLLS Trigger: GCTGAGCAGAGTCAGCAGCAAGCAGCCAGAAAACAT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGATGTTTTCTGGCTGCTaGCTGCTGACTCTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMMFSGC*LLTLLS Trigger: GCTGAGCAGAGTCAGCAGCAAGCAGCCAGAAAACAT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGAGGCGGGGTTTCTTCTaGGACTGCTTTTCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMRRGFF*DCFSWS Trigger: TGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCCT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTTTCTCTAGGAACAAACAGGAACTGTGCCTGGTACAATGTCTTAAACACCTCAAGATCGCCTTaGGTAATTGATTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRVSLGTNRNCAWYNVLNTSRSP*VIDSSS Trigger: TGAAGAAGAATCAATTACCAAAGGCGATCTTGAGGT...GTTTAAGACATTGTACCAGGCACAGTTCCTGTTTGTTCCTAGAGAAACCCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111564.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCCAATCCATATTTGGGTaGACACTGAAAATACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLNLKNPENKDGSASPPTQSIFG*TLKIPC Trigger: ACAAGGTATTTTCAGTGTCAACCCAAATATGGATTG...GGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGATGGCGGTCTCCAGTTaGGACTTCCATAGAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: QQQPKYTDVARKHFSANMMAVSS*DFHRAI Trigger: GATAGCTCTATGGAAGTCCAAACTGGAGACCGCCAT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGATGATCTTCATCAGCTaGGCCTGCATGGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMMIFIS*ACMVSI Trigger: GATGGAGACCATGCAGGCCAAGCTGATGAAGATCAT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTCCAAGAGCTTTTCTTaGACAGCACTGAGCTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMSKSFS*TALSCD Trigger: ATCGCAGCTCAGTGCTGTCAAAGAAAAGCTCTTGGA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111561.8 ENSMUST00000111566.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTCTGTAGTCTTGCATTaGTTTGCTTGGTGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISVVLH*FAWCPP Trigger: TGGAGGACACCAAGCAAACAAATGCAAGACTACAGA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCCACAGTTTTCAAGTaGTTTTCCTTAAGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKSTVFK*FSLSVS Trigger: GGACACACTTAAGGAAAACAACTTGAAAACTGTGGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACTTGTTCTCCTTGAGTaGAAGTTCCAAGTTTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKLVLLE*KFQVFD Trigger: GTCAAAAACTTGGAACTTCAACTCAAGGAGAACAAG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAACTTCATCTTGAGGTCTaGGTTCTTTCTTTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKLHLEV*VLSLKI Trigger: GATCTTCAAAGAAAGAACCAAGACCTCAAGATGAAG...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACCTTAAAAATCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATCCACTATTACCGAGTaGAGGAAATCAATCATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKNPENKDGSASPPTKSTITE*RKSIIC Trigger: GCAAATGATTGATTTCCTCAACTCGGTAATAGTGGA...TTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGATTTTTAAGGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGCCAATCTTTGTCACTTaGTGGACAGGAGCGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: QQQPKYTDVARKHFSANMPIFVT*WTGANN Trigger: ATTGTTCGCTCCTGTCCACAAAGTGACAAAGATTGG...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCCAATCTTTGTCACTTaGTGGACAGGAGCGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMPIFVT*WTGANN Trigger: ATTGTTCGCTCCTGTCCACAAAGTGACAAAGATTGG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTTCCAAGTTTTTGACCTaGAGCTCAAGCTTCACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIISKFLT*SSSFTL Trigger: TAAGGTGAAGCTTGAGCTCAAGGTCAAAAACTTGGA...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGGACACTGGTTGTAGCTaGTTTCCATCTTCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMDTGCS*FPSSFP Trigger: TGGAAAAGAAGATGGAAACAAGCTACAACCAGTGTC...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTCCAAGTTTTTGACCTaGAGCTCAAGCTTCACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMSKFLT*SSSFTL Trigger: TAAGGTGAAGCTTGAGCTCAAGGTCAAAAACTTGGA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCTTCATCTTGAGGTCTaGGTTCTTTCTTTGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIILHLEV*VLSLKI Trigger: GATCTTCAAAGAAAGAACCAAGACCTCAAGATGAAG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTTCTCCTGGAGCTCTTaGGTAATGCTATTAGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMFSWSS*VMLLAL Trigger: TAAGGCTAATAGCATTACCAAAGAGCTCCAGGAGAA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111564.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAAACAAGGACGGAAGTGCAAGCCCACCTACCAAATATTTATTATTATTCAATCCATATTTGGGTaGACACTGAAAATACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRKQGRKCKPTYQIFIIIQSIFG*TLKIPC Trigger: ACAAGGTATTTTCAGTGTCAACCCAAATATGGATTG...AATAATAATAAATATTTGGTAGGTGGGCTTGCACTTCCGTCCTTGTTTTCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGCAAAGCACTTATTTCTaGCAAAAGGGAGAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMQSTYF*QKGERH Trigger: ATGTCTCTCTCCCTTTTGCAAGAAATAAGTGCTTTG...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGAAACTGTTCCTCCTTTaGGTGCAGTTTATTTACGGT | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMKLFLL*VQFIYG Trigger: ACCGTAAATAAACTGCACCAAAAGGAGGAACAGTTT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGTCCACAGTTTTCAAGTaGTTTTCCTTAAGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMSTVFK*FSLSVS Trigger: GGACACACTTAAGGAAAACAACTTGAAAACTGTGGA...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGGTCTCAAGATCGCCTTaGGTAATTGATTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMVSRSP*VIDSSS Trigger: TGAAGAAGAATCAATTACCAAAGGCGATCTTGAGAC...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCAGTGTCAAAGCATAACAACAACAACAACAACCTAAATATACAGATGATTCATTCTGTAGTCTaGCATTTGTTTGCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LIPVSKHNNNNNNLNIQMIHSVV*HLFAWC Trigger: ACACCAAGCAAACAAATGCAAGACTACAGAATGAAT...CATCTGTATATTTAGGTTGTTGTTGTTGTTGTTATGCTTTGACACTGGAATGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS-3UTR CAA 90 bp | CAACAACAACCTAAATATACAGATGTAGCCAGGAAACATTTTAGTGCAAACATGATTCATTCTGTAGTCTaGCATTTGTTTGCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QQQPKYTDVARKHFSANMIHSVV*HLFAWC Trigger: ACACCAAGCAAACAAATGCAAGACTACAGAATGAAT...CATGTTTGCACTAAAATGTTTCCTGGCTACATCTGTATATTTAGGTTGTTGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS GCA 72 bp | TCCGCCTTCCTCAGCGCTTTGCTGGCACAGTCCAGCTaGGTGCGCAGGGTCTCCGCCTCCGTGCTGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SAFLSALLAQSS*VRRVSASVLSS Trigger: GCTGCTCAGCACGGAGGCGGAGACCCTGCGCACGCAGCTGGACTGTGCCAGCAAAGCGCTGAGGAAGGCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 72 bp | TGCAGGGTGGCCTCCAGGCTGGCGCTCAGCTTCTCCTaGCCCTGGCGCAGCGTGTCCTTCTCAAACTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRVASRLALSFS*PWRSVSFSNCR Trigger: CCTGCAGTTTGAGAAGGACACGCTGCGCCAGGGCCAGGAGAAGCTGAGCGCCAGCCTGGAGGCCACCCTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | TCGGAGGCCGCCAAGCTCTCCTTCTCGTGGAGGAGCTaGATACACTCGGAGTCCGTGATGGCGCGGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SEAAKLSFSWRS*IHSESVMARQV Trigger: GACCTGCCGCGCCATCACGGACTCCGAGTGTATCCAGCTCCTCCACGAGAAGGAGAGCTTGGCGGCCTCCGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 72 bp | AGCGTCCGCTCGGAGGCCGCCAAGCTCTCCTTCTCGTaGAGGAGCTGGATACACTCGGAGTCCGTGATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SVRSEAAKLSFS*RSWIHSESVMA Trigger: CGCCATCACGGACTCCGAGTGTATCCAGCTCCTCCACGAGAAGGAGAGCTTGGCGGCCTCCGAGCGGACGCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CAA 90 bp | GAGGTCTGGAGCTGTCTCATATCCAGCTCCGCCTTCCTCAGCGCTTaGCTGGCACAGTCCAGCTGCGTGCGCAGGGTCTCCGCCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: EVWSCLISSSAFLSA*LAQSSCVRRVSASV Trigger: CACGGAGGCGGAGACCCTGCGCACGCAGCTGGACTGTGCCAGCAAAGCGCTGAGGAAGGCGGAGCTGGATATGAGACAGCTCCAGACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 72 bp | GCTGTCTCATATCCAGCTCCGCCTTCCTCAGCGCTTTaGTGGCACAGTCCAGCTGCGTGCGCAGGGTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVSYPAPPSSAL*WHSPAACAGSP Trigger: CGGAGACCCTGCGCACGCAGCTGGACTGTGCCAGCAAAGCGCTGAGGAAGGCGGAGCTGGATATGAGACAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | ACCAGGACCAAGTTCTCGGCGGTGAGCTTCTTGACCTaGCCCTCCAGGTGCTCTTTCTCGGCGCGCGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TRTKFSAVSFLT*PSRCSFSARAF Trigger: GAAGGCGCGCGCCGAGAAAGAGCACCTGGAGGGCCAGGTCAAGAAGCTCACCGCCGAGAACTTGGTCCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 72 bp | GTCTCATATCCAGCTCCGCCTTCCTCAGCGCTTTGCTaGCACAGTCCAGCTGCGTGCGCAGGGTCTCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSYPAPPSSALC*HSPAACAGSPP Trigger: AGGCGGAGACCCTGCGCACGCAGCTGGACTGTGCCAGCAAAGCGCTGAGGAAGGCGGAGCTGGATATGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | CCAGGTGCTCTTTCTCGGCGCGCGCCTTCTCCGACATaGCCATCAGCTTGTCCTTGCAGAAGCGGAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGALSRRAPSPT*PSACPCRSGAP Trigger: AGGAGCTCCGCTTCTGCAAGGACAAGCTGATGGCCATGTCGGAGAAGGCGCGCGCCGAGAAAGAGCACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CAA 72 bp | CGGAGGATGGAGGGCCCGAGGCTTTCTCACTGGGTATaGTCTTCTCCACTGGAGCTGCAGCAGCAGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRMEGPRLSHWV*SSPLELQQQQA Trigger: CGCCTGCTGCTGCTGCAGCTCCAGTGGAGAAGACAATACCCAGTGAGAAAGCCTCGGGCCCTCCATCCTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CAA 72 bp | TTCTCGGCGCGCGCCTTCTCCGACATGGCCATCAGCTaGTCCTTGCAGAAGCGGAGCTCCTCGATGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: FSARAFSDMAIS*SLQKRSSSMST Trigger: GGTGCTCATCGAGGAGCTCCGCTTCTGCAAGGACAAGCTGATGGCCATGTCGGAGAAGGCGCGCGCCGAGAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CAA 72 bp | AGCTGTCTCATATCCAGCTCCGCCTTCCTCAGCGCTTaGCTGGCACAGTCCAGCTGCGTGCGCAGGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCLISSSAFLSA*LAQSSCVRRVS Trigger: GGAGACCCTGCGCACGCAGCTGGACTGTGCCAGCAAAGCGCTGAGGAAGGCGGAGCTGGATATGAGACAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS TCA 72 bp | TCACAGTATGGCCGCTCCTCGCTCCGGCTGCCATGGTaGGTGGAATGGGGAGGATCTTCCGACATCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQYGRSSLRLPW*VEWGGSSDICA Trigger: GGCACAGATGTCGGAAGATCCTCCCCATTCCACTCACCATGGCAGCCGGAGCGAGGAGCGGCCATACTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS TCA 72 bp | TGGTCTGGAGAAGGTTCTCCCGCTCGGCCTTCAGGGTaGGGCAGGTGTTGTCCAGGCTCATCTGCTTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: WSGEGSPARPSG*GRCCPGSSASP Trigger: CGGAGAAGCAGATGAGCCTGGACAACACCTGCCTCACCCTGAAGGCCGAGCGGGAGAACCTTCTCCAGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 72 bp | TGGAGCACCTCGGCCCTCTCTGTCAAGGCCACCTCGTaGTTCAGCCGCAGGTCATCCAGTATCTTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WSTSALSVKATS*FSRRSSSILVR Trigger: CCTCACCAAGATACTGGATGACCTGCGGCTGAACCACGAGGTGGCCTTGACAGAGAGGGCCGAGGTGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CAA 72 bp | TCTTTGACCAGGACCAAGTTCTCGGCGGTGAGCTTCTaGACCTGGCCCTCCAGGTGCTCTTTCTCGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLTRTKFSAVSF*TWPSRCSFSAR Trigger: GCGCGCCGAGAAAGAGCACCTGGAGGGCCAGGTCAAGAAGCTCACCGCCGAGAACTTGGTCCTGGTCAAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CAA 90 bp | CCAACCAGCACCCTGTCTCCGACCTTGAGCTCCCGCTCCCCCTTCTaGACAGAGCCAGCCTCTGAAAGGTTGGAGATCGACTCACTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTSTLSPTLSSRSPF*TEPASERLEIDSLA Trigger: TGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCGGGAGCTCAAGGTCGGAGACAGGGTGCTGGTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
||
| CDS TCA 72 bp | TCTGGCAGGCCACCTCCTTCTCGGAGGTTAAGTACGTaGTCTTCTCGTTCAGGCCCATCTCGAGCCGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGRPPPSRRLST*SSRSGPSRAGP Trigger: TGGCCCGGCTCGAGATGGGCCTGAACGAGAAGATCACGTACTTAACCTCCGAGAAGGAGGTGGCCTGCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS GCA 72 bp | CTAGTTCCAGGACATGTAGTCCTGTCCGGCTGGGTTTaGTGCTCACAGAGGAGGCCACGGAGCTCATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVPGHVVLSGWV*CSQRRPRSSWS Trigger: GCTCCATGAGCTCCGTGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTACATGTCCTGGAACTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149410.2 |
||
| CDS CCA 72 bp | TGCCCAGTGCCCAAACATCTCACAGATCTCACAGTATaGCCGCTCCTCGCTCCGGCTGCCATGGTGAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CPVPKHLTDLTV*PLLAPAAMVSG Trigger: TCCACTCACCATGGCAGCCGGAGCGAGGAGCGGCCATACTGTGAGATCTGTGAGATGTTTGGGCACTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
||
| CDS CCA 72 bp | TGGCCTCTAGTTCCAGGACATGTAGTCCTGTCCGGCTaGGTTTGCTGCTCACAGAGGAGGCCACGGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WPLVPGHVVLSG*VCCSQRRPRSS Trigger: TGAGCTCCGTGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTACATGTCCTGGAACTAGAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149410.2 |
||
| CDS CCA 72 bp | ATCTCCCGTTTCTCAGCCAGGAGGTTCTTGTTGTCCTaGAGCACCTCGGCCCTCTCTGTCAAGGCCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ISRFSARRFLLS*STSALSVKATS Trigger: CGAGGTGGCCTTGACAGAGAGGGCCGAGGTGCTCCAGGACAACAAGAACCTCCTGGCTGAGAAACGGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CCA 72 bp | TCAGAGTCCGGTTCTCGCTTTGGGACTCTAGGAGGTTaGCTGAGATGTGGCTGTTGGTCTGGGCCAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SESGSRFGTLGG*LRCGCWSGPAG Trigger: GCCAGCTGGCCCAGACCAACAGCCACATCTCAGCCAACCTCCTAGAGTCCCAAAGCGAGAACCGGACTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CAA 72 bp | ACCCTGTCTCCGACCTTGAGCTCCCGCTCCCCCTTCTaGACAGAGCCAGCCTCTGAAAGGTTGGAGATCGAC | + |
|
Preference number: 6 (lower is better) Translates to: TLSPTLSSRSPF*TEPASERLEID Trigger: GTCGATCTCCAACCTTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCGGGAGCTCAAGGTCGGAGACAGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
||
| CDS CAA 72 bp | CTCAGAGTCCGGTTCTCGCTTTGGGACTCTAGGAGGTaGGCTGAGATGTGGCTGTTGGTCTGGGCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRVRFSLWDSRR*AEMWLLVWASW Trigger: CCAGCTGGCCCAGACCAACAGCCACATCTCAGCCAACCTCCTAGAGTCCCAAAGCGAGAACCGGACTCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
||
| CDS CAA 90 bp | TCGTTTCTCAGCATCATCTCCCGTTTCTCAGCCAGGAGGTTCTTGTaGTCCTGGAGCACCTCGGCCCTCTCTGTCAAGGCCACCTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SFLSIISRFSARRFL*SWSTSALSVKATSW Trigger: CCACGAGGTGGCCTTGACAGAGAGGGCCGAGGTGCTCCAGGACAACAAGAACCTCCTGGCTGAGAAACGGGAGATGATGCTGAGAAACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | AGAAGACACCATGGTAGCTGCAGCAGTGGACAGAGGTaGAGCAGTTCTCCCAGGAGCTGCCTGCAGGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: RRHHGSCSSGQR*SSSPRSCLQAV Trigger: AACGGCCTGCAGGCAGCTCCTGGGAGAACTGCTTCACCTCTGTCCACTGCTGCAGCTACCATGGTGTCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS GCA 72 bp | GCCTTCAGGGTGAGGCAGGTGTTGTCCAGGCTCATCTaGTTCTCCGCAGCTGACTTCTTCTCAGTCGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AFRVRQVLSRLI*FSAADFFSVVR Trigger: CCTCACGACTGAGAAGAAGTCAGCTGCGGAGAAGCAGATGAGCCTGGACAACACCTGCCTCACCCTGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | GCCCGAGGCTTTCTCACTGGGTATTGTCTTCTCCACTaGAGCTGCAGCAGCAGCAGGCGTCTTCAAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ARGFLTGYCLLH*SCSSSRRLQGC Trigger: ACAGCCTTGAAGACGCCTGCTGCTGCTGCAGCTCCAGTGGAGAAGACAATACCCAGTGAGAAAGCCTCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
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| CDS CCA 72 bp | GTGAAGCAGTTCTCCCAGGAGCTGCCTGCAGGCCGTTaGCTTCATCTTCTGCCTGCACCTTCCTCGTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VKQFSQELPAGR*LHLLPAPSSLA Trigger: AGCTAACGAGGAAGGTGCAGGCAGAAGATGAAGCCAACGGCCTGCAGGCAGCTCCTGGGAGAACTGCTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CAA 72 bp | TCTAGTTCCAGGACATGTAGTCCTGTCCGGCTGGGTTaGCTGCTCACAGAGGAGGCCACGGAGCTCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSRTCSPVRLG*LLTEEATELME Trigger: CTCCATGAGCTCCGTGGCCTCCTCTGTGAGCAGCAAACCCAGCCGGACAGGACTACATGTCCTGGAACTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149410.2 |
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| CDS CAA 72 bp | AAGCGGAGCTCCTCGATGAGCACCTGCATGCTCACCTaGGAGGCTTCCAGGGAGTCGTTCTCCATGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: KRSSSMSTCMLT*EASRESFSMCI Trigger: GATGCACATGGAGAACGACTCCCTGGAAGCCTCCAAGGTGAGCATGCAGGTGCTCATCGAGGAGCTCCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | TTCTCCCTGTCAGCAGCTTCCACCATGGTCCGTAGCTGGTCCATCTaGGCCTCTAGTTCCAGGACATGTAGTCCTGTCCGGCTGGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSLSAASTMVRSWSI*ASSSRTCSPVRLGL Trigger: CAAACCCAGCCGGACAGGACTACATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149410.2 |
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| CDS CAA 90 bp | TCCTTGCAGAAGCGGAGCTCCTCGATGAGCACCTGCATGCTCACCTaGGAGGCTTCCAGGGAGTCGTTCTCCATGTGCATCTTCAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLQKRSSSMSTCMLT*EASRESFSMCIFRS Trigger: ACTCCTGAAGATGCACATGGAGAACGACTCCCTGGAAGCCTCCAAGGTGAGCATGCAGGTGCTCATCGAGGAGCTCCGCTTCTGCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 72 bp | GGAGCTGCCTGCAGGCCGTTGGCTTCATCTTCTGCCTaGACCTTCCTCGTTAGCTTTGAAGGTCGGGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GAACRPLASSSA*TFLVSFEGRVN Trigger: ATTCACCCGACCTTCAAAGCTAACGAGGAAGGTGCAGGCAGAAGATGAAGCCAACGGCCTGCAGGCAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS GCA 72 bp | TCCAGGGCCGACTTCTCCTTCAGGAGACTATCCTGCTaGTTTTTCAGCTTGGCGACTTTCTGGCAGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRADFSFRRLSC*FFSLATFWQAT Trigger: GGTGGCCTGCCAGAAAGTCGCCAAGCTGAAAAAGCAGCAGGATAGTCTCCTGAAGGAGAAGTCGGCCCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | TCTTCCAGGAGTTTGGTGAGGCTGGAGTTCGAGGTCTaGAGCTGTCTCATATCCAGCTCCGCCTTCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSLVRLEFEV*SCLISSSAFLS Trigger: GCTGAGGAAGGCGGAGCTGGATATGAGACAGCTCCAGACCTCGAACTCCAGCCTCACCAAACTCCTGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 72 bp | GGCGTCTTCAAGGCTGTGCTTCCCGGCTTAAGGATCTaGGTAGGGGCCTTCAGGCCGCTGGGTTTTAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: GVFKAVLPGLRI*VGAFRPLGFSI Trigger: TATGCTAAAACCCAGCGGCCTGAAGGCCCCTACCAAGATCCTTAAGCCGGGAAGCACAGCCTTGAAGACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
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| CDS CAA 90 bp | CTCTGTATCTCTTCCTCCAGGAGCACTACTCTCCCATGGAGCTTGTaGTTCTCGTACAAAGAGGTCTCGCTCTCCTTGGCCCTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCISSSRSTTLPWSL*FSYKEVSLSLALAS Trigger: GGAGGCCAGGGCCAAGGAGAGCGAGACCTCTTTGTACGAGAACAACAAGCTCCATGGGAGAGTAGTGCTCCTGGAGGAAGAGATACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | AGCCTCTGTATCTCTTCCTCCAGGAGCACTACTCTCCCATGGAGCTaGTTGTTCTCGTACAAAGAGGTCTCGCTCTCCTTGGCCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLCISSSRSTTLPWS*LFSYKEVSLSLALA Trigger: GGCCAGGGCCAAGGAGAGCGAGACCTCTTTGTACGAGAACAACAAGCTCCATGGGAGAGTAGTGCTCCTGGAGGAAGAGATACAGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | GAGCTCCCGCTCCCCCTTCTTGACAGAGCCAGCCTCTaGAAGGTTGGAGATCGACTCACTGGCAGTTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ELPLPLLDRASL*KVGDRLTGSFC Trigger: ACAAAAACTGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCGGGAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
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| CDS CAA 72 bp | ACGTTCTCCAACTCGAAAGTCATCCACAAACTCCTCTaGGGTCTCGGAGGATGGAGGGCCCGAGGCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TFSNSKVIHKLL*GLGGWRARGFL Trigger: GAGAAAGCCTCGGGCCCTCCATCCTCCGAGACCCAAGAGGAGTTTGTGGATGACTTTCGAGTTGGAGAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CAA 72 bp | GCCACCTCGTGGTTCAGCCGCAGGTCATCCAGTATCTaGGTGAGGCAGCTGTGTAGTTCTTGCAGTTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ATSWFSRRSSSI*VRQLCSSCSSN Trigger: GTTGGAACTGCAAGAACTACACAGCTGCCTCACCAAGATACTGGATGACCTGCGGCTGAACCACGAGGTGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | CACCCAAACACGTTCTCCAACTCGAAAGTCATCCACAAACTCCTCTaGGGTCTCGGAGGATGGAGGGCCCGAGGCTTTCTCACTGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: HPNTFSNSKVIHKLL*GLGGWRARGFLTGY Trigger: ATACCCAGTGAGAAAGCCTCGGGCCCTCCATCCTCCGAGACCCAAGAGGAGTTTGTGGATGACTTTCGAGTTGGAGAACGTGTTTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CAA 90 bp | AGGGCCGACTTCTCCTTCAGGAGACTATCCTGCTGCTTTTTCAGCTaGGCGACTTTCTGGCAGGCCACCTCCTTCTCGGAGGTTAAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RADFSFRRLSCCFFS*ATFWQATSFSEVKY Trigger: GTACTTAACCTCCGAGAAGGAGGTGGCCTGCCAGAAAGTCGCCAAGCTGAAAAAGCAGCAGGATAGTCTCCTGAAGGAGAAGTCGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | TTGTCTTTCCTCAGAGTCCGGTTCTCGCTTTGGGACTCTAGGAGGTaGGCTGAGATGTGGCTGTTGGTCTGGGCCAGCTGGCTAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSFLRVRFSLWDSRR*AEMWLLVWASWLIS Trigger: AGAGATTAGCCAGCTGGCCCAGACCAACAGCCACATCTCAGCCAACCTCCTAGAGTCCCAAAGCGAGAACCGGACTCTGAGGAAAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | AAGCTTCACCTTATCAGACTCCAGTGTCTGCACAACTaGGTGCAGGGACTTGGCGGTGGCATTCTCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KLHLIRLQCLHN*VQGLGGGILSP Trigger: AGGGGAGAGAATGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGACACTGGAGTCTGATAAGGTGAAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS TCA 72 bp | GTCTGCTGGATTTCCCGAATCTCCTCGTTTAGCTTCTaGCACTCTTCCTGCAGGTTCAGGCCATCCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VCWISRISSFSF*HSSCRFRPSLS Trigger: GCTGAGGGATGGCCTGAACCTGCAGGAAGAGTGTCAGAAGCTAAACGAGGAGATTCGGGAAATCCAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | CCTCGTGGTTCAGCCGCAGGTCATCCAGTATCTTGGTaGGGCAGCTGTGTAGTTCTTGCAGTTCCAACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRGSAAGHPVSW*GSCVVLAVPTW Trigger: CCAAGTTGGAACTGCAAGAACTACACAGCTGCCTCACCAAGATACTGGATGACCTGCGGCTGAACCACGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | GACATCTGTGCCTGGGTGGGACAGTCCTCTGTATCGTaGAGGTCAAAGCAGTCACAGATGTCACAGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DICAWVGQSSVS*RSKQSQMSQKR Trigger: CCTCTTCTGTGACATCTGTGACTGCTTTGACCTCCACGATACAGAGGACTGTCCCACCCAGGCACAGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS CCA 72 bp | TTCTCCCTGTCAGCAGCTTCCACCATGGTCCGTAGCTaGTCCATCTTGGCCTCTAGTTCCAGGACATGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: FSLSAASTMVRS*SILASSSRTCS Trigger: ACTACATGTCCTGGAACTAGAGGCCAAGATGGACCAGCTACGGACCATGGTGGAAGCTGCTGACAGGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149410.2 |
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| CDS CCA 72 bp | TTCTCGCTTTGGGACTCTAGGAGGTTGGCTGAGATGTaGCTGTTGGTCTGGGCCAGCTGGCTAATCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSLWDSRRLAEM*LLVWASWLISF Trigger: GAAAGAGATTAGCCAGCTGGCCCAGACCAACAGCCACATCTCAGCCAACCTCCTAGAGTCCCAAAGCGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 72 bp | CGCTCCCCCTTCTTGACAGAGCCAGCCTCTGAAAGGTaGGAGATCGACTCACTGGCAGTTTTTGTGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSPFLTEPASER*EIDSLAVFVRL Trigger: CAACCTCACAAAAACTGCCAGTGAGTCGATCTCCAACCTTTCAGAGGCTGGCTCTGTCAAGAAGGGGGAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000149410.2 |
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| CDS CAA 72 bp | TTCTCCTTCAGGAGACTATCCTGCTGCTTTTTCAGCTaGGCGACTTTCTGGCAGGCCACCTCCTTCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSFRRLSCCFFS*ATFWQATSFSE Trigger: CTCCGAGAAGGAGGTGGCCTGCCAGAAAGTCGCCAAGCTGAAAAAGCAGCAGGATAGTCTCCTGAAGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 72 bp | TCTTCCTCCAGGAGCACTACTCTCCCATGGAGCTTGTaGTTCTCGTACAAAGAGGTCTCGCTCTCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRSTTLPWSL*FSYKEVSLSLA Trigger: GGCCAAGGAGAGCGAGACCTCTTTGTACGAGAACAACAAGCTCCATGGGAGAGTAGTGCTCCTGGAGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | TTCTCGTTCAGGCCCATCTCGAGCCGGGCCACCTCTTCTGATTGTTaGCTGAGTTTCTCGGTGATGATTCTATTCTCGCTGAGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSFRPISSRATSSDC*LSFSVMILFSLSSS Trigger: GGAGCTGCTCAGCGAGAATAGAATCATCACCGAGAAACTCAGCAAACAATCAGAAGAGGTGGCCCGGCTCGAGATGGGCCTGAACGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | TCTGTCAAGGCCACCTCGTGGTTCAGCCGCAGGTCATCCAGTATCTaGGTGAGGCAGCTGTGTAGTTCTTGCAGTTCCAACTTGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVKATSWFSRRSSSI*VRQLCSSCSSNLDL Trigger: CAAGTCCAAGTTGGAACTGCAAGAACTACACAGCTGCCTCACCAAGATACTGGATGACCTGCGGCTGAACCACGAGGTGGCCTTGACAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 72 bp | TCTGTGAGCAAGGCACTGGTGAGGCTGATCGACTTCTaGAAGGAGGCTTTCTCTTCATCGGCGTCTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVSKALVRLIDF*KEAFSSSASFL Trigger: CAGAAAAGACGCCGATGAAGAGAAAGCCTCCTTGCAGAAGTCGATCAGCCTCACCAGTGCCTTGCTCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS GCA 72 bp | TTGAGCTCAAGCTTCACCTTATCAGACTCCAGTGTCTaGACAACTGAGTGCAGGGACTTGGCGGTGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSSFTLSDSSV*TTECRDLAVAF Trigger: GAATGCCACCGCCAAGTCCCTGCACTCAGTTGTGCAGACACTGGAGTCTGATAAGGTGAAGCTTGAGCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS CCA 72 bp | AAAGTCATCCACAAACTCCTCTTGGGTCTCGGAGGATaGAGGGCCCGAGGCTTTCTCACTGGGTATTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KVIHKLLLGLGG*RARGFLTGYCL Trigger: AAGACAATACCCAGTGAGAAAGCCTCGGGCCCTCCATCCTCCGAGACCCAAGAGGAGTTTGTGGATGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CCA 72 bp | GAAGGTCGGGTGAATATGCCCTTTAAAGGTTCACACTaGAAATACCGCACTCCCGCCACAGAGCCATCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: EGRVNMPFKGSH*KYRTPATEPSF Trigger: GAACGATGGCTCTGTGGCGGGAGTGCGGTATTTCCAGTGTGAACCTTTAAAGGGCATATTCACCCGACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CCA 72 bp | GCCGAAGGTTCTTTTGCCGTTGACTGGGACGGTTTGTaGGGAATATTTGAGGGAGTGGCTGGAGAAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: AEGSFAVDWDGL*GIFEGVAGEED Trigger: GTCTTCTTCTCCAGCCACTCCCTCAAATATTCCCCACAAACCGTCCCAGTCAACGGCAAAAGAACCTTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS CCA 72 bp | AGACTATCCTGCTGCTTTTTCAGCTTGGCGACTTTCTaGCAGGCCACCTCCTTCTCGGAGGTTAAGTACGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLSCCFFSLATF*QATSFSEVKYV Trigger: CACGTACTTAACCTCCGAGAAGGAGGTGGCCTGCCAGAAAGTCGCCAAGCTGAAAAAGCAGCAGGATAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 72 bp | AGGCCCATCTCGAGCCGGGCCACCTCTTCTGATTGTTaGCTGAGTTTCTCGGTGATGATTCTATTCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPISSRATSSDC*LSFSVMILFSL Trigger: CAGCGAGAATAGAATCATCACCGAGAAACTCAGCAAACAATCAGAAGAGGTGGCCCGGCTCGAGATGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | GAGTCGTTCTCCATGTGCATCTTCAGGAGTTCTTCCTGGGCAGCGTaGATCTCCTTAAGTAGTTTCTCTCTCTCGGCCACTAGGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: ESFSMCIFRSSSWAA*ISLSSFSLSATRDS Trigger: GGAGTCCCTAGTGGCCGAGAGAGAGAAACTACTTAAGGAGATCAACGCTGCCCAGGAAGAACTCCTGAAGATGCACATGGAGAACGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | ATCTTGGTGAGGCAGCTGTGTAGTTCTTGCAGTTCCAACTTGGACTaGGAAAGGGCAGCGAAGTCGCTTTTGAGGGTCTCGATGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ILVRQLCSSCSSNLD*ERAAKSLLRVSMLA Trigger: GGCCAACATCGAGACCCTCAAAAGCGACTTCGCTGCCCTTTCCAAGTCCAAGTTGGAACTGCAAGAACTACACAGCTGCCTCACCAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | CTCGTCAGCTCCTGGTTCTCCTTCTTTCTTTCCTGCAGCTCCTTCTaGAGGGCATCGATGTTACCGAGCAGCTTCATCTTCTCCTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: LVSSWFSFFLSCSSF*RASMLPSSFIFSCI Trigger: TATGCAGGAGAAGATGAAGCTGCTCGGTAACATCGATGCCCTCAAGAAGGAGCTGCAGGAAAGAAAGAAGGAGAACCAGGAGCTGACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | ATCTGTTCCATGATCTGCATGGCGTCTTCTGCAGTCTaGGCAGCTTTGGCTTTGTCGGCCTGTGTTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ICSMICMASSAV*AALALSACVFS Trigger: GCTGAAAACACAGGCCGACAAAGCCAAAGCTGCTCAGACTGCAGAAGACGCCATGCAGATCATGGAACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS TCA 72 bp | CTCGTTCAGGCCCATCTCGAGCCGGGCCACCTCTTCTaGTTGTTTGCTGAGTTTCTCGGTGATGATTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: LVQAHLEPGHLF*LFAEFLGDDSI Trigger: AATAGAATCATCACCGAGAAACTCAGCAAACAATCAGAAGAGGTGGCCCGGCTCGAGATGGGCCTGAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 72 bp | TTTGGTCATCTGTTCCATGATCTGCATGGCGTCTTCTaGAGTCTGAGCAGCTTTGGCTTTGTCGGCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FGHLFHDLHGVF*SLSSFGFVGLC Trigger: ACACAGGCCGACAAAGCCAAAGCTGCTCAGACTGCAGAAGACGCCATGCAGATCATGGAACAGATGACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS GCA 72 bp | TTTGGTCATCTGTTCCATGATCTGCATGGCGTCTTCTaGAGTCTGAGCAGCCGTGAACGAATGAAGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FGHLFHDLHGVF*SLSSRERMKGL Trigger: GAGACCCTTCATTCGTTCACGGCTGCTCAGACTGCAGAAGACGCCATGCAGATCATGGAACAGATGACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | CCTGGTTCTCCTTCTTTCTTTCCTGCAGCTCCTTCTTaGGGGCATCGATGTTACCGAGCAGCTTCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PGSPSFFPAAPS*GHRCYRAASSS Trigger: AGAAGATGAAGCTGCTCGGTAACATCGATGCCCTCAAGAAGGAGCTGCAGGAAAGAAAGAAGGAGAACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 72 bp | TTCTCTTGGGTAAGTGTGAAATTCTCAGTTTGGAGCTaGTCGCTGCACACCCTCAGCCTCTGTATCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSWVSVKFSVWS*SLHTLSLCISS Trigger: GGAAGAGATACAGAGGCTGAGGGTGTGCAGCGAGCAGCTCCAAACTGAGAATTTCACACTTACCCAAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS GCA 72 bp | TCATCCAGTATCTTGGTGAGGCAGCTGTGTAGTTCTTaGAGTTCCAACTTGGACTTGGAAAGGGCAGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSILVRQLCSS*SSNLDLERAAK Trigger: CTTCGCTGCCCTTTCCAAGTCCAAGTTGGAACTGCAAGAACTACACAGCTGCCTCACCAAGATACTGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | ACCTGCTTCTCTTCCGAGACTCTCTCCTTTTCTAAGTaGAGGGTTTCGTTTACCGACCAGAGTTTCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TCFSSETLSFSK*RVSFTDQSFCW Trigger: CCAGCAGAAACTCTGGTCGGTAAACGAAACCCTCCACTTAGAAAAGGAGAGAGTCTCGGAAGAGAAGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | TTGGTCTTCTCTTGGGTAAGTGTGAAATTCTCAGTTTaGAGCTGCTCGCTGCACACCCTCAGCCTCTGTATC | + |
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Preference number: 6 (lower is better) Translates to: LVFSWVSVKFSV*SCSLHTLSLCI Trigger: GATACAGAGGCTGAGGGTGTGCAGCGAGCAGCTCCAAACTGAGAATTTCACACTTACCCAAGAGAAGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 72 bp | GTGTCCTCCAAGGAGGCCAGCGTTTCTGTTTTCTCTTaGGTCATCTGTTCCATGATCTGCATGGCGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VSSKEASVSVFS*VICSMICMASS Trigger: AGAAGACGCCATGCAGATCATGGAACAGATGACCAAAGAGAAAACAGAAACGCTGGCCTCCTTGGAGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS CAA 72 bp | CTCTGTTCAAGCTCCTTAGTGCGGGCATGCTCCAGTTaGGTCTGCGTCTCAAGATCGCCTTTGGTAATTGAT | + |
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Preference number: 6 (lower is better) Translates to: LCSSSLVRACSS*VCVSRSPLVID Trigger: ATCAATTACCAAAGGCGATCTTGAGACGCAGACCAAACTGGAGCATGCCCGCACTAAGGAGCTTGAACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 ENSMUST00000149410.2 |
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| CDS CAA 72 bp | AGACCAGTGAGCACTAGCTCTTTCTCCTGGAGCTCTTaGGTAATGCTATTAGCCTTAATCTCCGCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RPVSTSSFSWSS*VMLLALISASC Trigger: GCAGGAGGCGGAGATTAAGGCTAATAGCATTACCAAAGAGCTCCAGGAGAAAGAGCTAGTGCTCACTGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111564.8 ENSMUST00000149410.2 |
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| CDS CAA 72 bp | TCCATGTGCATCTTCAGGAGTTCTTCCTGGGCAGCGTaGATCTCCTTAAGTAGTTTCTCTCTCTCGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: SMCIFRSSSWAA*ISLSSFSLSAT Trigger: AGTGGCCGAGAGAGAGAAACTACTTAAGGAGATCAACGCTGCCCAGGAAGAACTCCTGAAGATGCACATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 72 bp | GTTGGTCTTCTCTTGGGTAAGTGTGAAATTCTCAGTTaGGAGCTGCTCGCTGCACACCCTCAGCCTCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: VGLLLGKCEILS*ELLAAHPQPLY Trigger: ATACAGAGGCTGAGGGTGTGCAGCGAGCAGCTCCAAACTGAGAATTTCACACTTACCCAAGAGAAGACCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | CTGTCCTGCAGACCAGTGAGCACTAGCTCTTTCTCCTGGAGCTCTTaGGTAATGCTATTAGCCTTAATCTCCGCCTCCTGCAGTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LSCRPVSTSSFSWSS*VMLLALISASCSLF Trigger: AAACAAACTGCAGGAGGCGGAGATTAAGGCTAATAGCATTACCAAAGAGCTCCAGGAGAAAGAGCTAGTGCTCACTGGTCTGCAGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111564.8 ENSMUST00000149410.2 |
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| CDS CAA 90 bp | TTTGTAGCCTCTTGGTCATACTTCCTTCTCAGATCCCCTATGGTCTaGATAGAACTTTCCCTGTCAGCGAGCAGATCTCCGTTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: FVASWSYFLLRSPMV*IELSLSASRSPFCS Trigger: GCTGCAGAACGGAGATCTGCTCGCTGACAGGGAAAGTTCTATCAAGACCATAGGGGATCTGAGAAGGAAGTATGACCAAGAGGCTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | CTGCCTGCACCTTCCTCGTTAGCTTTGAAGGTCGGGTaGATATGCCCTTTAAAGGTTCACACTGGAAATACC | + |
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Preference number: 6 (lower is better) Translates to: LPAPSSLALKVG*ICPLKVHTGNT Trigger: GGTATTTCCAGTGTGAACCTTTAAAGGGCATATTCACCCGACCTTCAAAGCTAACGAGGAAGGTGCAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000144121.2 ENSMUST00000149410.2 |
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| CDS GCA 72 bp | GTCATAACTGTTCAGGTCTTCCCCGTTGCCATTGAGTaGAGCTTCAGACATCATCTCCACCTTCATCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: VITVQVFPVAIE*SFRHHLHLHLE Trigger: CTCAAGATGAAGGTGGAGATGATGTCTGAAGCTGCACTCAATGGCAACGGGGAAGACCTGAACAGTTATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 ENSMUST00000154672.2 |
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| CDS CCA 72 bp | CTGTCCTGCAGACCAGTGAGCACTAGCTCTTTCTCCTaGAGCTCTTTGGTAATGCTATTAGCCTTAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSCRPVSTSSFS*SSLVMLLALIS Trigger: GGAGATTAAGGCTAATAGCATTACCAAAGAGCTCCAGGAGAAAGAGCTAGTGCTCACTGGTCTGCAGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111564.8 ENSMUST00000149410.2 |
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| CDS CCA 72 bp | GAGTCGTTCTCCATGTGCATCTTCAGGAGTTCTTCCTaGGCAGCGTTGATCTCCTTAAGTAGTTTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ESFSMCIFRSSS*AALISLSSFSL Trigger: GAGAGAGAAACTACTTAAGGAGATCAACGCTGCCCAGGAAGAACTCCTGAAGATGCACATGGAGAACGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | ATCTCCTCCACCTTCTGCTCTGAGTTGGTCTTCTCTTaGGTAAGTGTGAAATTCTCAGTTTGGAGCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: ISSTFCSELVFS*VSVKFSVWSCS Trigger: CGAGCAGCTCCAAACTGAGAATTTCACACTTACCCAAGAGAAGACCAACTCAGAGCAGAAGGTGGAGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 72 bp | GTAATGCTATTAGCCTTAATCTCCGCCTCCTGCAGTTaGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VMLLALISASCS*FSVSSISTRCW Trigger: CCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGGCTAATAGCATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111564.8 ENSMUST00000149410.2 |
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| CDS CAA 90 bp | AGCTCTTTGGTAATGCTATTAGCCTTAATCTCCGCCTCCTGCAGTTaGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLVMLLALISASCS*FSVSSISTRCWSSA Trigger: TGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGGCTAATAGCATTACCAAAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111564.8 ENSMUST00000149410.2 |
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| CDS CAA 90 bp | GAAGTACTGGCAAACTTTTCTTTCTTAATCTCCGCCTCCTGCAGTTaGTTTAGCGTGTCCTCCATTTCCACTAGGTGCTGGTCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: EVLANFSFLISASCS*FSVSSISTRCWSSA Trigger: TGCAGAAGACCAGCACCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGAAAGAAAAGTTTGCCAGTACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
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| CDS CAA 90 bp | AGGAGCTCCTTTTCCTTAATGATCTCCTCCACCTTCTGCTCTGAGTaGGTCTTCTCTTGGGTAAGTGTGAAATTCTCAGTTTGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RSSFSLMISSTFCSE*VFSWVSVKFSVWSC Trigger: GCAGCTCCAAACTGAGAATTTCACACTTACCCAAGAGAAGACCAACTCAGAGCAGAAGGTGGAGGAGATCATTAAGGAAAAGGAGCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | ATCTTGCATCCTTGTCTGAGCAGAGACCGCCTCCTCTaGAGTACTGGCAAACTTTTCTTTCTTAATCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: ILHPCLSRDRLL*STGKLFFLNLR Trigger: GCGGAGATTAAGAAAGAAAAGTTTGCCAGTACTTCAGAGGAGGCGGTCTCTGCTCAGACAAGGATGCAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
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| CDS TCA 72 bp | GTTTCGTTTACCGACCAGAGTTTCTGCTGGTCTTCCTaGAGCAAAGTGATCTTGGTCTCCACTTCTATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VSFTDQSFCWSS*SKVILVSTSIS Trigger: GCTGATAGAAGTGGAGACCAAGATCACTTTGCTTCAGGAAGACCAGCAGAAACTCTGGTCGGTAAACGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CCA 72 bp | AGTCACAGATGTCACAGAAGAGGCGGGGTTTCTTCTTaGACTGCTTTTCCTGGTCATCACTGTCATAACTGT | + |
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Preference number: 6 (lower is better) Translates to: SHRCHRRGGVSS*TAFPGHHCHNC Trigger: ACAGTTATGACAGTGATGACCAGGAAAAGCAGTCCAAGAAGAAACCCCGCCTCTTCTGTGACATCTGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031382.14 ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000137363.8 |
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| CDS CAA 72 bp | GTCTCAAGCTCTCTAATTTTAAGGGTAAGCTTGCTCTaGTCTTTCCTCAGAGTCCGGTTCTCGCTTTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: VSSSLILRVSLL*SFLRVRFSLWD Trigger: GTCCCAAAGCGAGAACCGGACTCTGAGGAAAGACAAGAGCAAGCTTACCCTTAAAATTAGAGAGCTTGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS TCA 72 bp | CAGTTTGGTCTGCGTCTCAAGATCGCCTTTGGTAATTaGTTCTTCTTCAACTCGGAACTGAAGGTCCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: QFGLRLKIAFGN*FFFNSELKVLN Trigger: GTTGAGGACCTTCAGTTCCGAGTTGAAGAAGAATCAATTACCAAAGGCGATCTTGAGACGCAGACCAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063905.12 ENSMUST00000111561.8 ENSMUST00000137363.8 ENSMUST00000149410.2 |
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| CDS TCA 72 bp | TCTGCAAGGAGGCTTTCTCTTCATCGGCGTCTTTTCTaGACTCAGATTCTCTTAAAGTGTTACTGGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SARRLSLHRRLF*TQILLKCYWAS Trigger: GCTTGCCCAGTAACACTTTAAGAGAATCTGAGTTCAGAAAAGACGCCGATGAAGAGAAAGCCTCCTTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063905.12 |
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| CDS GCA 72 bp | GTACTGGCAAACTTTTCTTTCTTAATCTCCGCCTCCTaGAGTTTGTTTAGCGTGTCCTCCATTTCCACTAGG | + |
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Preference number: 6 (lower is better) Translates to: VLANFSFLISAS*SLFSVSSISTR Trigger: CCTAGTGGAAATGGAGGACACGCTAAACAAACTGCAGGAGGCGGAGATTAAGAAAGAAAAGTTTGCCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
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| CDS TCA 72 bp | CCGACCAGAGTTTCTGCTGGTCTTCCTGAAGCAAAGTaGTCTTGGTCTCCACTTCTATCAGCTTTGATAAAA | + |
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Preference number: 6 (lower is better) Translates to: PTRVSAGLPEAK*SWSPLLSALIK Trigger: TTTTATCAAAGCTGATAGAAGTGGAGACCAAGATCACTTTGCTTCAGGAAGACCAGCAGAAACTCTGGTCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 72 bp | TTTTCCTTAATGATCTCCTCCACCTTCTGCTCTGAGTaGGTCTTCTCTTGGGTAAGTGTGAAATTCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FSLMISSTFCSE*VFSWVSVKFSV Trigger: AACTGAGAATTTCACACTTACCCAAGAGAAGACCAACTCAGAGCAGAAGGTGGAGGAGATCATTAAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154672.2 |
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| CDS CAA 90 bp | TTCAGACATCATCTCCACCTTCATCTTGAGGTCTTGGTTCTTTCTTaGAAGATCCACTATTACCGAGTTGAGGAAATCAATCTGACTCTC | + |
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Preference number: 6 (lower is better) Translates to: FRHHLHLHLEVLVLS*KIHYYRVEEINLTL Trigger: GAGAGTCAGATTGATTTCCTCAACTCGGTAATAGTGGATCTTCAAAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGATGATGTCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031382.14 ENSMUST00000111561.8 ENSMUST00000111564.8 ENSMUST00000111566.9 ENSMUST00000154672.2 |
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| CDS CAA 90 bp | TTCAGACATCATCTCCACCTTCATCTTGAGGTCTTGGTTCTTTCTTaGAAGATCCACTATTACCGAGTTGAGGAAATCAATCATTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FRHHLHLHLEVLVLS*KIHYYRVEEINHLL Trigger: CAGCAAATGATTGATTTCCTCAACTCGGTAATAGTGGATCTTCAAAGAAAGAACCAAGACCTCAAGATGAAGGTGGAGATGATGTCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063905.12 ENSMUST00000137363.8 |
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| CDS TCA 72 bp | GTGTTACTGGGCAAGCTCTTTTTCATTTCTAACAACTaGTTATTGAGTACAGATCGTTCTTCTTCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VLLGKLFFISNN*LLSTDRSSSSF Trigger: GAAGCTGGAAGAAGAACGATCTGTACTCAATAATCAGTTGTTAGAAATGAAAAAGAGCTTGCCCAGTAACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063905.12 |
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