Pregenerated sensors for CLINT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006169Ensembl transcript IDs: ENSMUST00000109260.3, ENSMUST00000109261.11
Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACAGGGTAACTaGAGGAGACACGGGCGAAGTCTCACAGCTACTGCCAGCTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: AEQSQERLPSSAQGN*RRHGRSLTATASCL Trigger: CAGGCAGCTGGCAGTAGCTGTGAGACTTCGCCCGTGTCTCCTGCAGTTACCCTGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR TCA 90 bp | ATCCGTGCCAGTCCTCCCACAGACTACGCTGTGACATGGGCTCTCTaGCCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTAT | + |
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Preference number: 1 (lower is better) Translates to: IRASPPTDYAVTWAL*PREALVTLTPFGAY Trigger: ATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAGAGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACTGGCACGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR CCA 90 bp | ATGGGCTCTCTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTaGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: MGSLTQRGSRDPHPI*SVSSLGKPILTASS Trigger: AGATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAGAGAGCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR GCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTaGAAAGGCAGTGAACAACCGCTACAGACAGACAACACACGAGTC | + |
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Preference number: 1 (lower is better) Translates to: GYKATHRKQLCQVSH*KGSEQPLQTDNTRV Trigger: GACTCGTGTGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR TCA 90 bp | TTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCTaGAGTGCTCTTGCATCGCTTCTGAAACACCAGCCTTTTTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: LERIFTGETDPDCLI*SALASLLKHQPFWF Trigger: GAACCAAAAAGGCTGGTGTTTCAGAAGCGATGCAAGAGCACTTCAGATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR GCA 90 bp | TCTGACTTGAATGATGGCTACAAGGCTACGCACAGGAAACAGCTTTaGCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACA | + |
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Preference number: 1 (lower is better) Translates to: SDLNDGYKATHRKQL*QVSHCKGSEQPLQT Trigger: TGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCCATCATTCAAGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR TCA 90 bp | CACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCAGATGGGGAAACCGATCCTaGCTGCCTCATCTGAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HSYCQLPAEEGSNPWKLRWGNRS*LPHLKC Trigger: GCACTTCAGATGAGGCAGTCAGGATCGGTTTCCCCA...TCTGAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR GCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGCTGCCTCATCTGAAGTaGTCTTGCATCGCTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: EAHTLSPIRASPPTDYAVLPHLK*SCIASE Trigger: TTCAGAAGCGATGCAAGAGCACTTCAGATGAGGCAG...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR GCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGCCCAACATCACCTATTaGAGTTACAGAGTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EAHTLSPIRASPPTDYAVPNITY*SYRVFF Trigger: GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGG...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGACATGGGCTCTAAACACCAGCCTTTTTaGTTCTTTATGTGGGTTATT | + |
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Preference number: 2 (lower is better) Translates to: TQPHPCQSSHRLRCDMGSKHQPF*FFMWVI Trigger: AATAACCCACATAAAGAACCAAAAAGGCTGGTGTTT...AGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACAGCACTGCTGGAGTCTTaGCAAAAGCACACACATCCA | + |
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Preference number: 2 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTALLES*QKHTHP Trigger: TGGATGTGTGTGCTTTTGCCAAGACTCCAGCAGTGC...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCAACATCCAGTTACCTCTaGTTTAGCCATAATCACATA | + |
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Preference number: 2 (lower is better) Translates to: LTATASCLRKRGQIHGNSTSSYL*FSHNHI Trigger: TATGTGATTATGGCTAAATCAGAGGTAACTGGATGT...TGAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACACTGCCTCATCTGAAGTaGTCTTGCATCGCTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTLPHLK*SCIASE Trigger: TTCAGAAGCGATGCAAGAGCACTTCAGATGAGGCAG...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACACCCAACATCACCTATTaGAGTTACAGAGTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTPNITY*SYRVFF Trigger: GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGG...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR CCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCAAACACCAGCCTTTTTaGTTCTTTATGTGGGTTATT | + |
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Preference number: 2 (lower is better) Translates to: GYKATHRKQLCQVSHCKGKHQPF*FFMWVI Trigger: AATAACCCACATAAAGAACCAAAAAGGCTGGTGTTT...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR TCA 90 bp | TATTGGAACCATATTGCTAATGCGGTATTACACACTCAAAACGCAAACAAAATGTGGGGAAACCGATCCTaGCTGCCTCATCTGAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: YWNHIANAVLHTQNANKMWGNRS*LPHLKC Trigger: GCACTTCAGATGAGGCAGTCAGGATCGGTTTCCCCA...CATTTTGTTTGCGTTTTGAGTGTGTAATACCGCATTAGCAATATGGTTCCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR TCA 72 bp | AGTCCTCCCACAGACTACGCTGTGACATGGGCTCTCTaGCCCAGAGAGGCTCTCGTGACCCTCACCCCATTT | + |
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Preference number: 3 (lower is better) Translates to: SPPTDYAVTWAL*PREALVTLTPF Trigger: AAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAGAGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR GCA 72 bp | TCCCAAGAAAGGCTTCCCAGTTCTGCACAGGGTAACTaGAGGAGACACGGGCGAAGTCTCACAGCTACTGCC | + |
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Preference number: 3 (lower is better) Translates to: SQERLPSSAQGN*RRHGRSLTATA Trigger: GGCAGTAGCTGTGAGACTTCGCCCGTGTCTCCTGCAGTTACCCTGTGCAGAACTGGGAAGCCTTTCTTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR CCA 72 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTaGAGCGTATCTTCACTGGGGAAACCGATCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: LTQRGSRDPHPI*SVSSLGKPILT Trigger: AGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR TCA 72 bp | CCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTaGCTGCCTCATCTGAAGTGCTCTTGCATCGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: PFGAYLHWGNRS*LPHLKCSCIAS Trigger: AGAAGCGATGCAAGAGCACTTCAGATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR GCA 72 bp | GCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTaGAAAGGCAGTGAACAACCGCTACAGACAGACAAC | + |
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Preference number: 3 (lower is better) Translates to: ATHRKQLCQVSH*KGSEQPLQTDN Trigger: GTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR GCA 72 bp | AATGATGGCTACAAGGCTACGCACAGGAAACAGCTTTaGCAAGTCAGTCACTGCAAAGGCAGTGAACAACCG | + |
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Preference number: 3 (lower is better) Translates to: NDGYKATHRKQL*QVSHCKGSEQP Trigger: CGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCCATCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR CAA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCGAAACACCAGCCTTTTaGGTTCTTTATGTGGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: SPHLERIFTGETDPDCLIETPAF*VLYVGY Trigger: ATAACCCACATAAAGAACCAAAAAGGCTGGTGTTTC...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR CAA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCGAAACACCAGCCTTTTaGGTTCTTTATGTGGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: GYKATHRKQLCQVSHCKGETPAF*VLYVGY Trigger: ATAACCCACATAAAGAACCAAAAAGGCTGGTGTTTC...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR GCA 72 bp | GAACTGCTTAGCATCTTCCATCCCAACATCACCTATTaGAGTTACAGAGTCTTCTTCCACTCGCTCCGTTAC | + |
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Preference number: 3 (lower is better) Translates to: ELLSIFHPNITY*SYRVFFHSLRY Trigger: GTAACGGAGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| 3UTR-3UTR CAA 90 bp | TATTGGAACCATATTGCTAATGCGGTATTACACACTCAAAACGCAAACAAAATGAGCACTGCTGGAGTCTaGGCAAAAGCACACACATCC | + |
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Preference number: 3 (lower is better) Translates to: YWNHIANAVLHTQNANKMSTAGV*AKAHTS Trigger: GGATGTGTGTGCTTTTGCCAAGACTCCAGCAGTGCT...CATTTTGTTTGCGTTTTGAGTGTGTAATACCGCATTAGCAATATGGTTCCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR GCA 90 bp | ACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGACATGGGCTCTGGTCCCCCGAGGACTTaGTGCTCGGCACCGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: TQPHPCQSSHRLRCDMGSGPPRT*CSAPMA Trigger: AGCCATCGGTGCCGAGCAGCAAGTCCTCGGGGGACC...AGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR GCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGTGGCCATGCTGGGCATaGCCATTCCCATGGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVWPCWA*PFPWCP Trigger: CGGGCACCATGGGAATGGGCATGCCCAGCATGGCCA...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR TCA 90 bp | ACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGACATGGGCTCTGGCTTGGCTGACGACTaGGGCGTGTGGGTTGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: TQPHPCQSSHRLRCDMGSGLADD*GVWVEA Trigger: TGCTTCAACCCACACGCCTCAGTCGTCAGCCAAGCC...AGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR GCA 90 bp | CGCTGTGACATGGGCTCTCTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTGGGCCATTCCCATGGTaGCCGTCATTACACCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RCDMGSLTQRGSRDPHPIGPFPW*PSLHRA Trigger: TGCCCGGTGTAATGACGGGCACCATGGGAATGGCCC...AATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAGAGAGCCCATGTCACAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGGCATGCCCATTCCCATaGTGCCCGACAAGCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVACPFP*CPTSPS Trigger: GGATGGGCTTGTCGGGCACCATGGGAATGGGCATGC...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR TCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGTCCTCCGGAACTTGCTaGTGGTGTCGTCGATCGTGC | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVSSGTC*WCRRSC Trigger: GCACGATCGACGACACCATCAGCAAGTTCCGGAGGA...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CCA 90 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTATCTTCACTGGCTTGTGCCGGGTTGTaGTGGTCTCTGTGGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LTQRGSRDPHPIWSVSSLACAGL*WSLWPV Trigger: CACAGGCCACAGAGACCACCACAACCCGGCACAAGC...CAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGTCTGGGAAGACGTCATaGTTGCCTGGGATGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVSGKTS*LPGMSP Trigger: TGGGCTCATCCCAGGCAACCATGACGTCTTCCCAGA...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGGCTGTGATCTGGACATaGGCAAACCAAGTCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVAVIWT*ANQVPR Trigger: CCGTGGGACTTGGTTTGCCCATGTCCAGATCACAGC...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109261.11 |
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| CDS-3UTR TCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGTCTCTGTGGCCTGTGTaGTGTGGATATGCTTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVSLWPV*CGYASS Trigger: CGACGAAGCATATCCACATCACACAGGCCACAGAGA...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR GCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCTGGCCATGCTGGGCATaGCCATTCCCATGGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLIWPCWA*PFPWCP Trigger: CGGGCACCATGGGAATGGGCATGCCCAGCATGGCCA...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CCA 90 bp | CTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCAGCTTGTGCCGGGTTGTaGTGGTCTCTGTGGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LTATASCLRKRGQIHGNSACAGL*WSLWPV Trigger: CACAGGCCACAGAGACCACCACAACCCGGCACAAGC...TGAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CCA 90 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTATCTTCACTGGGGCCTGATGGGGCTTaGTTGAAGGCACTCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LTQRGSRDPHPIWSVSSLGPDGA*LKALQS Trigger: TGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCC...CAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CCA 90 bp | ACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGACATGGGCTCTAGGGCAGGGTTTTGCTaGCCGACTTCTGGACCATAT | + |
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Preference number: 4 (lower is better) Translates to: TQPHPCQSSHRLRCDMGSRAGFC*PTSGPY Trigger: ATATGGTCCAGAAGTCGGCCAGCAAAACCCTGCCCT...AGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR TCA 90 bp | CGCTGTGACATGGGCTCTCTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTCATGGTTGCCTGGGATaGGCCCATAAGATCAAACAG | + |
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Preference number: 4 (lower is better) Translates to: RCDMGSLTQRGSRDPHPIHGCLG*AHKIKQ Trigger: CTGTTTGATCTTATGGGCTCATCCCAGGCAACCATG...AATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAGAGAGCCCATGTCACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR GCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGCCCCGTGTAATGTGCTaGTGCTCCAAGATCAATGGT | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVPRVMC*CSKING Trigger: ACCATTGATCTTGGAGCAGCAGCACATTACACGGGG...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR GCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGGTCCCCCGTGTAATGTaGTGCTGCTCCAAGATCAAT | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVVPRVM*CCSKIN Trigger: ATTGATCTTGGAGCAGCAGCACATTACACGGGGGAC...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR GCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGAGGCTTCTGCAGCACTaGACTAACATTCTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVRLLQH*TNILQR Trigger: CCTCTGCAGAATGTTAGTGCAGTGCTGCAGAAGCCT...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109261.11 |
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| CDS-3UTR GCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCGGGCCATTCCCATGGTaGCCGTCATTACACCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GYKATHRKQLCQVSHCKGGPFPW*PSLHRA Trigger: TGCCCGGTGTAATGACGGGCACCATGGGAATGGCCC...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TCTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCCAGAAGGCATGGCCATaGTGGGCATGCCCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSYCQLPAEEGSNPWKLQKAWP*WACPFP Trigger: TGGGAATGGGCATGCCCAGCATGGCCATGCCTTCTG...GAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTATCTTCACTGATGGCTGCTGGGGCTTaGAAGGCTGCATACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTQRGSRDPHPIWSVSSLMAAGA*KAAYQV Trigger: TACCTGGTATGCAGCCTTCCAAGCCCCAGCAGCCAT...CAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCGAGGGGCCATTCCCATaGTGCCCGTCATTACACCGG | + |
|
Preference number: 4 (lower is better) Translates to: GYKATHRKQLCQVSHCKGEGPFP*CPSLHR Trigger: CCGGTGTAATGACGGGCACCATGGGAATGGCCCCTC...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCGCATGCCCATTCCCATaGTGCCCGACAAGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLIACPFP*CPTSPS Trigger: GGATGGGCTTGTCGGGCACCATGGGAATGGGCATGC...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TCTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCAGGAGAGGGTTAGTTTaGGGCCGGACAGGAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SHSYCQLPAEEGSNPWKLRRGLV*GRTGSM Trigger: CATGCTTCCTGTCCGGCCTCAAACTAACCCTCTCCT...GAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CGCTGTGACATGGGCTCTCTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTGAGAAATTCATGCTCTaGGAAGACGTCATGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCDMGSLTQRGSRDPHPIEKFML*EDVMVA Trigger: GGCAACCATGACGTCTTCCCAGAGCATGAATTTCTC...AATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAGAGAGCCCATGTCACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACAGAGGGGCCATTCCCATaGTGCCCGTCATTACACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TVKGNRRAVPRKASQFCTEGPFP*CPSLHR Trigger: CCGGTGTAATGACGGGCACCATGGGAATGGCCCCTC...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | AGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGAGAAGCCACAGGGCCTaGTGGGGCTTGGTTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKQLCQVSHCKGSEQPLQRSHRA*WGLVEG Trigger: GCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCT...CTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | CTGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCGCCCTGGCTCATCCCTaGGCTGTTCCCCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSIFHPNITYCSYRVFFALAHP*AVPQRG Trigger: GCCCCTCTGGGGAACAGCGCAGGGATGAGCCAGGGC...GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCAGATCCACCTGCTGACTaGCTACTGCCATCAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTATASCLRKRGQIHGNSDPPAD*LLPSNR Trigger: CCTGTTTGATGGCAGTAGCCAGTCAGCAGGTGGATC...TGAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGTTGCTGGCCGACTTCTaGACCATATCTGTATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EAHTLSPIRASPPTDYAVLLADF*TISVFC Trigger: ACAGAATACAGATATGGTCCAGAAGTCGGCCAGCAA...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109260.3 |
||
| CDS-3UTR TCA 90 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTATCTTCACTGCCGATCCATTTCTTATaGGGTAAGCTAGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQRGSRDPHPIWSVSSLPIHFL*GKLGAA Trigger: TGCTGCTCCTAGCTTACCTCATAAGAAATGGATCGG...CAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCTCTCTGTGGCCTGTGTaGTGTGGATATGCTTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLISLWPV*CGYASS Trigger: CGACGAAGCATATCCACATCACACAGGCCACAGAGA...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCGGTCCCCCGAGGACTTaGTGCTCGGCACCGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSGPPRT*CSAPMA Trigger: AGCCATCGGTGCCGAGCAGCAAGTCCTCGGGGGACC...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGATGCCCATTCCCATGGTaGCCGACAAGCCCATCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGCPFPW*PTSPSP Trigger: CGGGGATGGGCTTGTCGGGCACCATGGGAATGGGCA...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTTGCCCATTCCCATGGTaGCCGACAAGCCCATCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLPSQHHLLQLQSLLPLACPFPW*PTSPSP Trigger: CGGGGATGGGCTTGTCGGGCACCATGGGAATGGGCA...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCAGACATTCTGATCTGGGCTaGCTTTGTCCCCCGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSYCQLPAEEGSNPWKLRHSDLG*LCPPCN Trigger: ATTACACGGGGGACAAAGCCAGCCCAGATCAGAATG...TCTGAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACAATGGCTGCTGGGGCTTaGAAGGCTGCATACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVKGNRRAVPRKASQFCTMAAGA*KAAYQV Trigger: TACCTGGTATGCAGCCTTCCAAGCCCCAGCAGCCAT...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCTTAAGCGATGGCTGCTaGGGCTTGGAAGGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GYKATHRKQLCQVSHCKGLSDGC*GLEGCI Trigger: TATGCAGCCTTCCAAGCCCCAGCAGCCATCGCTTAA...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTATCTTCACTGCAAAGGCATCTTGCTTaGGTTGCACAGTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTQRGSRDPHPIWSVSSLQRHLA*VAQFQK Trigger: CTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTG...CAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTTGGCAATCTCTCCCATaGGCTGCCCAGAAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLPSQHHLLQLQSLLPLAWQSLP*AAQKVP Trigger: GGGGACCTTCTGGGCAGCTCATGGGAGAGATTGCCA...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACAATCTCTCCCATGAGCTaGCCAGAAGGTCCCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTISPMS*PEGPQG Trigger: TCCCTGGGGACCTTCTGGGCAGCTCATGGGAGAGAT...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCTGGGGCTTGGAAGGCTaGATACCAGGTAGTAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GYKATHRKQLCQVSHCKGWGLEG*IPGSKL Trigger: CAACTTACTACCTGGTATGCAGCCTTCCAAGCCCCA...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCTGGCAATCTCTCCCATaGGCTGCCCAGAAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSWQSLP*AAQKVP Trigger: GGGGACCTTCTGGGCAGCTCATGGGAGAGATTGCCA...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGATCCTCCGGAACTTGCTaGTGGTGTCGTCGATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGSSGTC*WCRRSC Trigger: GCACGATCGACGACACCATCAGCAAGTTCCGGAGGA...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCCTGAGGCGTGTGGGTTaGAGCATTCTGATCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSIPTSPIAVTESSSTRLRRVG*SILIWA Trigger: AGCCCAGATCAGAATGCTTCAACCCACACGCCTCAG...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACACTGATGGGGCTTGGTTaGAGGCACTCCAGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTLMGLG*RHSSHQ Trigger: TTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAG...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCAGAAGCCACAGGGCCTaGTGGGGCTTGGTTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSRSHRA*WGLVEG Trigger: GCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCT...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCTGTTTGATGGAGAACTaGGGTTCACAGCTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLICLMEN*GSQLQS Trigger: GCTTTGGAGCTGTGAACCTCAGTTCTCCATCAAACA...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCGACAGGAAGCATGTTTaGTGGAGAACTGAGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLIDRKHV*WRTEVH Trigger: GTGAACCTCAGTTCTCCATCAAACATGCTTCCTGTC...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | CCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAACAGACCGCCCTGGCTCATCCCTaGGCTGTTCCCCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLMISSMDLRVVVKEQTALAHP*AVPQRG Trigger: GCCCCTCTGGGGAACAGCGCAGGGATGAGCCAGGGC...GGTCTGTTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGACAGAAGGCATGGCCATaGTGGGCATGCCCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGQKAWP*WACPFP Trigger: TGGGAATGGGCATGCCCAGCATGGCCATGCCTTCTG...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CGCTGTGACATGGGCTCTCTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTCATGTTCATGAGTTCTaGGAACTGCTCATACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCDMGSLTQRGSRDPHPIHVHEF*ELLIHK Trigger: TTTATGTATGAGCAGTTCCCAGAACTCATGAACATG...AATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAGAGAGCCCATGTCACAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCCGTCCCATTTGGACTTaGGCTCAGGATCGTACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSIPTSPIAVTESSSTRRPIWT*AQDRTA Trigger: AGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACG...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TCTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCCAAGATCAATGGTTTTaGAAGGGTTTGCTGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSYCQLPAEEGSNPWKLQDQWF*KGLLCA Trigger: AGCGCACAGCAAACCCTTCCAAAACCATTGATCTTG...GAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TCTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCCTGCTCCAAGATCAATaGTTTTGGAAGGGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSYCQLPAEEGSNPWKLLLQDQ*FWKGLL Trigger: CAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAG...GAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACACATTCTGATCTGGGCTaGCTTTGTCCCCCGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVKGNRRAVPRKASQFCTHSDLG*LCPPCN Trigger: ATTACACGGGGGACAAAGCCAGCCCAGATCAGAATG...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTCTGGGAAGACGTCATaGTTGCCTGGGATGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSIPTSPIAVTESSSTRSGKTS*LPGMSP Trigger: TGGGCTCATCCCAGGCAACCATGACGTCTTCCCAGA...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCGGGATCATCATTCGTTaGTTCTCGAACCTTAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GYKATHRKQLCQVSHCKGGIIIR*FSNLRL Trigger: GAGTCTAAGGTTCGAGAAGCAACGAATGATGATCCC...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCCCTGTCATCATCCTGTaGAAACTCAACCAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GYKATHRKQLCQVSHCKGPVIIL*KLNQFL Trigger: AAGGAACTGGTTGAGTTTGCACAGGATGATGACAGG...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCCCTGTCATCATCCTGTaGAAACTCAACCAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLIPVIIL*KLNQFL Trigger: AAGGAACTGGTTGAGTTTGCACAGGATGATGACAGG...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGATTTGCTGTGCGCTTGTaGCGGGTTGTGGTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGFAVRL*RVVVVS Trigger: AGAGACCACCACAACCCGGCACAAGCGCACAGCAAA...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TCTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCCGTGTAATGTGCTGCTaGTCCAAGATCAATGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHSYCQLPAEEGSNPWKLRVMCC*SKINGF Trigger: AAAACCATTGATCTTGGAGCAGCAGCACATTACACG...GAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | AGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGGCATCTTGCTTGGGTTaGACAGTTCCAGAAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKQLCQVSHCKGSEQPLQASCLG*TVPEGM Trigger: CATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGC...CTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCTTCCCACTTGTTGCTTaGGAAGGGAAATTGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLIFPLVA*EGKLPD Trigger: ATCAGGCAATTTCCCTTCCCAAGCAACAAGTGGGAA...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCGGGCCTGATGGGGCTTaGTTGAAGGCACTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSGPDGA*LKALQS Trigger: TGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCC...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | AGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGGACGTCATGGTTGCCTaGGATGAGCCCATAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQLCQVSHCKGSEQPLQDVMVA*DEPIRS Trigger: TGATCTTATGGGCTCATCCCAGGCAACCATGACGTC...CTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCCTGTATTCTGTGATCTaGACATGGGCAAACCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYKATHRKQLCQVSHCKGLYSVI*TWANQV Trigger: GACTTGGTTTGCCCATGTCCAGATCACAGAATACAG...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109260.3 |
||
| CDS-3UTR TCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCCGAATGTTTATACCTTaGTCCTTGCCATGCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLIRMFIP*SLPCSS Trigger: AGATGAGCATGGCAAGGATCAAGGTATAAACATTCG...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCATGAGTTCTGGGAACTaGTCATACATAAAGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLIMSSGN*SYIKVA Trigger: GGCTACCTTTATGTATGAGCAGTTCCCAGAACTCAT...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCCCCCGTGTAATGTGCTaGTGCTCCAAGATCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSIPTSPIAVTESSSTRPRVMC*CSKING Trigger: ACCATTGATCTTGGAGCAGCAGCACATTACACGGGG...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACAGCATCTTGCTTGGGTTaGACAGTTCCAGAAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTASCLG*TVPEGM Trigger: CATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGC...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACATTTGCAAAGGCATCTTaGTTGGGTTGCACAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVKGNRRAVPRKASQFCTFAKAS*LGCTVP Trigger: TGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAA...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCAAAGTTGGCAAAGTTTaGAAAGGCATCTTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPHLERIFTGETDPDCLIKVGKV*KGILLG Trigger: CCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTTT...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCGTCCCATTTGGACTTaGGCTCAGGATCGTACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSIFHPNITYCSYRVFFRPIWT*AQDRTA Trigger: AGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACG...GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCGACGTCATGGTTGCCTaGGATGAGCCCATAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSIPTSPIAVTESSSTRDVMVA*DEPIRS Trigger: TGATCTTATGGGCTCATCCCAGGCAACCATGACGTC...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTTTAAGCGATGGCTGCTaGGGCTTGGAAGGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: HLPSQHHLLQLQSLLPLALSDGC*GLEGCI Trigger: TATGCAGCCTTCCAAGCCCCAGCAGCCATCGCTTAA...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | AGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACCAAAGCATGTTCATaGGTTCTGGGAACTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKQLCQVSHCKGSEQPLQTKACS*VLGTAH Trigger: ATGAGCAGTTCCCAGAACTCATGAACATGCTTTGGT...CTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | CCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAACAGACCGGCTTGGCTGACGACTaGGGCGTGTGGGTTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLMISSMDLRVVVKEQTGLADD*GVWVEA Trigger: TGCTTCAACCCACACGCCTCAGTCGTCAGCCAAGCC...GGTCTGTTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGACATGGTTGCCTGGGATaGGCCCATAAGATCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGHGCLG*AHKIKQ Trigger: CTGTTTGATCTTATGGGCTCATCCCAGGCAACCATG...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCGTCTTTGTTCTTCTTTaGTTTCTTTCGCTCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GYKATHRKQLCQVSHCKGVFVLL*FLSLFS Trigger: CGAGAAGAGCGAAAGAAAGCAAAGAAGAACAAAGAC...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCGTGGCCTGTGTGATGTaGATATGCTTCGTCGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLSIFHPNITYCSYRVFFVACVM*ICFVVT Trigger: GGTGACGACGAAGCATATCCACATCACACAGGCCAC...GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCGCAGAGGCTGTGATCTaGACATGGGCAAACCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSAEAVI*TWANQV Trigger: GACTTGGTTTGCCCATGTCCAGATCACAGCCTCTGC...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCAGGGCAGGGTTTTGCTaGCCGACTTCTGGACCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSIFHPNITYCSYRVFFRAGFC*PTSGPY Trigger: ATATGGTCCAGAAGTCGGCCAGCAAAACCCTGCCCT...GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCACCAAAGCATGTTCATaGGTTCTGGGAACTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSIPTSPIAVTESSSTRTKACS*VLGTAH Trigger: ATGAGCAGTTCCCAGAACTCATGAACATGCTTTGGT...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACAGGGATCATCATTCGTTaGTTCTCGAACCTTAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTGIIIR*FSNLRL Trigger: GAGTCTAAGGTTCGAGAAGCAACGAATGATGATCCC...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACAGTCTTTGTTCTTCTTTaGTTTCTTTCGCTCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TVKGNRRAVPRKASQFCTVFVLL*FLSLFS Trigger: CGAGAAGAGCGAAAGAAAGCAAAGAAGAACAAAGAC...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTACTGCACTAACATTCTaGAGAGGCTGTGATCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLPSQHHLLQLQSLLPLATALTF*RGCDLD Trigger: GTCCAGATCACAGCCTCTGCAGAATGTTAGTGCAGT...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCTGGGGCTTGGAAGGCTaGATACCAGGTAGTAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSWGLEG*IPGSKL Trigger: CAACTTACTACCTGGTATGCAGCCTTCCAAGCCCCA...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCCAAGATCAATGGTTTTaGAAGGGTTTGCTGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSIPTSPIAVTESSSTRQDQWF*KGLLCA Trigger: AGCGCACAGCAAACCCTTCCAAAACCATTGATCTTG...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | CCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAACAGACCAAGGCATGGCCATGCTaGGCATGCCCATTCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLMISSMDLRVVVKEQTKAWPC*ACPFPW Trigger: CCATGGGAATGGGCATGCCCAGCATGGCCATGCCTT...GGTCTGTTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGACAAAGGCATCTTGCTTaGGTTGCACAGTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGQRHLA*VAQFQK Trigger: CTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTG...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCCGAATGTTTATACCTTaGTCCTTGCCATGCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSIPTSPIAVTESSSTRRMFIP*SLPCSS Trigger: AGATGAGCATGGCAAGGATCAAGGTATAAACATTCG...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | CCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAACAGACCAGGAGAGGGTTAGTTTaGGGCCGGACAGGAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PTLMISSMDLRVVVKEQTRRGLV*GRTGSM Trigger: CATGCTTCCTGTCCGGCCTCAAACTAACCCTCTCCT...GGTCTGTTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGATTCCCACTTGTTGCTTaGGAAGGGAAATTGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGFPLVA*EGKLPD Trigger: ATCAGGCAATTTCCCTTCCCAAGCAACAAGTGGGAA...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCGAGAAATTCATGCTCTaGGAAGACGTCATGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSEKFML*EDVMVA Trigger: GGCAACCATGACGTCTTCCCAGAGCATGAATTTCTC...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCTTTGCAAAGGCATCTTaGTTGGGTTGCACAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSFAKAS*LGCTVP Trigger: TGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAA...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTAAAGTTGGCAAAGTTTaGAAAGGCATCTTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLPSQHHLLQLQSLLPLAKVGKV*KGILLG Trigger: CCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTTT...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCCTGCTCCAAGATCAATaGTTTTGGAAGGGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLASSIPTSPIAVTESSSLLQDQ*FWKGLL Trigger: CAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAG...GGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TATTGGAACCATATTGCTAATGCGGTATTACACACTCAAAACGCAAACAAAATGCTGAGGCGTGTGGGTTaGAGCATTCTGATCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YWNHIANAVLHTQNANKMLRRVG*SILIWA Trigger: AGCCCAGATCAGAATGCTTCAACCCACACGCCTCAG...CATTTTGTTTGCGTTTTGAGTGTGTAATACCGCATTAGCAATATGGTTCCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TATTGGAACCATATTGCTAATGCGGTATTACACACTCAAAACGCAAACAAAATGCTGATGGGGCTTGGTTaGAGGCACTCCAGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: YWNHIANAVLHTQNANKMLMGLG*RHSSHQ Trigger: TTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAG...CATTTTGTTTGCGTTTTGAGTGTGTAATACCGCATTAGCAATATGGTTCCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | GATCATCCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAATTTGCTGTGCGCTTGTaGCGGGTTGTGGTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DHPTLMISSMDLRVVVKEFAVRL*RVVVVS Trigger: AGAGACCACCACAACCCGGCACAAGCGCACAGCAAA...TTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGGATGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | CTGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCGTGTAATGTGCTGCTaGTCCAAGATCAATGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSIFHPNITYCSYRVFFRVMCC*SKINGF Trigger: AAAACCATTGATCTTGGAGCAGCAGCACATTACACG...GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GATCATCCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAAGATCCACCTGCTGACTaGCTACTGCCATCAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DHPTLMISSMDLRVVVKEDPPAD*LLPSNR Trigger: CCTGTTTGATGGCAGTAGCCAGTCAGCAGGTGGATC...TTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGGATGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | GATCATCCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAATCTGTGATCTGGACATaGGCAAACCAAGTCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: DHPTLMISSMDLRVVVKESVIWT*ANQVPR Trigger: CCGTGGGACTTGGTTTGCCCATGTCCAGATCACAGA...TTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGGATGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109260.3 |
||
| CDS-3UTR GCA 90 bp | GATCATCCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAAGTCCCCCGTGTAATGTaGTGCTGCTCCAAGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DHPTLMISSMDLRVVVKEVPRVM*CCSKIN Trigger: ATTGATCTTGGAGCAGCAGCACATTACACGGGGGAC...TTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGGATGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | GATCATCCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAATGTTTGATGGAGAACTaGGGTTCACAGCTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DHPTLMISSMDLRVVVKECLMEN*GSQLQS Trigger: GCTTTGGAGCTGTGAACCTCAGTTCTCCATCAAACA...TTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGGATGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR TCA 90 bp | TATTGGAACCATATTGCTAATGCGGTATTACACACTCAAAACGCAAACAAAATGGACAGGAAGCATGTTTaGTGGAGAACTGAGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YWNHIANAVLHTQNANKMDRKHV*WRTEVH Trigger: GTGAACCTCAGTTCTCCATCAAACATGCTTCCTGTC...CATTTTGTTTGCGTTTTGAGTGTGTAATACCGCATTAGCAATATGGTTCCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR GCA 90 bp | TATTGGAACCATATTGCTAATGCGGTATTACACACTCAAAACGCAAACAAAATGTTATACCTTGATCCTTaGCATGCTCATCTACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YWNHIANAVLHTQNANKMLYLDP*HAHLQS Trigger: ACTTTGTAGATGAGCATGGCAAGGATCAAGGTATAA...CATTTTGTTTGCGTTTTGAGTGTGTAATACCGCATTAGCAATATGGTTCCAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CCA 90 bp | TATTGGAACCATATTGCTAATGCGGTATTACACACTCAAAACGCAAACAAAATGCATGTTCATGAGTTCTaGGAACTGCTCATACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: YWNHIANAVLHTQNANKMHVHEF*ELLIHK Trigger: TTTATGTATGAGCAGTTCCCAGAACTCATGAACATG...CATTTTGTTTGCGTTTTGAGTGTGTAATACCGCATTAGCAATATGGTTCCAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGACATGGGCTCTACAGGTCTGCCGAGTTaGAGGCAGCAGGCGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TQPHPCQSSHRLRCDMGSTGLPS*RQQAVG Trigger: GCCCACCGCCTGCTGCCTCAAACTCGGCAGACCTGT...AGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 90 bp | GGCTACTGCCATCAAACAGGTCAACGAGGTCCCCCGAGGACTTGCTaGTCGGCACCGATGGCTTGGCTGACGACTGAGGCGTGTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GYCHQTGQRGPPRTC*SAPMAWLTTEACGL Trigger: CAACCCACACGCCTCAGTCGTCAGCCAAGCCATCGGTGCCGAGCAGCAAGTCCTCGGGGGACCTCGTTGACCTGTTTGATGGCAGTAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 90 bp | ACTGGCTACTGCCATCAAACAGGTCAACGAGGTCCCCCGAGGACTTaGTGCTCGGCACCGATGGCTTGGCTGACGACTGAGGCGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGYCHQTGQRGPPRT*CSAPMAWLTTEACG Trigger: CCCACACGCCTCAGTCGTCAGCCAAGCCATCGGTGCCGAGCAGCAAGTCCTCGGGGGACCTCGTTGACCTGTTTGATGGCAGTAGCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 90 bp | GCACAGTTCCAGAAGGCATGGCCATGCTGGGCATGCCCATTCCCATaGTGCCCGACAAGCCCATCCCCGAGGCCGACATCCCCATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQFQKAWPCWACPFP*CPTSPSPRPTSPCS Trigger: TGAACATGGGGATGTCGGCCTCGGGGATGGGCTTGTCGGGCACCATGGGAATGGGCATGCCCAGCATGGCCATGCCTTCTGGAACTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 90 bp | CAGTTCCAGAAGGCATGGCCATGCTGGGCATGCCCATTCCCATGGTaGCCGACAAGCCCATCCCCGAGGCCGACATCCCCATGTTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: QFQKAWPCWACPFPW*PTSPSPRPTSPCSC Trigger: ACATGAACATGGGGATGTCGGCCTCGGGGATGGGCTTGTCGGGCACCATGGGAATGGGCATGCCCAGCATGGCCATGCCTTCTGGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 90 bp | AGGCATCTTGCTTGGGTTGCACAGTTCCAGAAGGCATGGCCATGCTaGGCATGCCCATTCCCATGGTGCCCGACAAGCCCATCCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RHLAWVAQFQKAWPC*ACPFPWCPTSPSPR Trigger: CCTCGGGGATGGGCTTGTCGGGCACCATGGGAATGGGCATGCCCAGCATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 90 bp | TGCACCTTTCCGGAGAGTCCTCCCGGTCTTTCCTCCGGAACTTGCTaGTGGTGTCGTCGATCGTGCTCCCGATCTTGTCGCTCAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CTFPESPPGLSSGTC*WCRRSCSRSCRSAR Trigger: GCGAGCTGAGCGACAAGATCGGGAGCACGATCGACGACACCATCAGCAAGTTCCGGAGGAAAGACCGGGAGGACTCTCCGGAAAGGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 90 bp | CTGTGGGGCACTGCCGAAGAGCTCACCACCAGAAGCCACAGGGCCTaGTGGGGCTTGGTTGAAGGCACTCCAGTCACCAAAGTCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: LWGTAEELTTRSHRA*WGLVEGTPVTKVTI Trigger: AATGGTGACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCTGGTGGTGAGCTCTTCGGCAGTGCCCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCATGCGCTTGTGCCGGGTaGTGGTGGTCTCTGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTATASCLRKRGQIHGNSCACAG*WWSLWP Trigger: AGGCCACAGAGACCACCACAACCCGGCACAAGCGCA...TGAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCACAGGTCTGCCGAGTTaGAGGCAGCAGGCGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPHLERIFTGETDPDCLITGLPS*RQQAVG Trigger: GCCCACCGCCTGCTGCCTCAAACTCGGCAGACCTGT...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | GAAGCACACACACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGCAGGAGAGGGTTAGTTaGAGGCCGGACAGGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: EAHTLSPIRASPPTDYAVQERVS*RPDRKH Trigger: ATGCTTCCTGTCCGGCCTCAAACTAACCCTCTCCTG...CACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGTGTGTGTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | TCTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCACCACATTGGTGGCTTaGTCCACCAGCTCCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SHSYCQLPAEEGSNPWKLTTLVA*STSSRT Trigger: GGTGCGGGAGCTGGTGGACAAAGCCACCAATGTGGT...GAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTATCTTCACTGTCGTCCCATTTGGACTaGGGCTCAGGATCGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: LTQRGSRDPHPIWSVSSLSSHLD*GSGSYR Trigger: GCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGA...CAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTATCTTCACTGCCTGATGGGGCTTGGTaGAAGGCACTCCAGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LTQRGSRDPHPIWSVSSLPDGAW*KALQSP Trigger: TGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGG...CAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 90 bp | GGCTGGCTTTGTCCCCCGTGTAATGTGCTGCTGCTCCAAGATCAATaGTTTTGGAAGGGTTTGCTGTGCGCTTGTGCCGGGTTGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWLCPPCNVLLLQDQ*FWKGLLCACAGLWW Trigger: CCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAGCAGCACATTACACGGGGGACAAAGCCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS CCA 90 bp | CTGCCGAAGAGCTCACCACCAGAAGCCACAGGGCCTGATGGGGCTTaGTTGAAGGCACTCCAGTCACCAAAGTCACCATTCCCACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPKSSPPEATGPDGA*LKALQSPKSPFPLV Trigger: AACAAGTGGGAATGGTGACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCTGGTGGTGAGCTCTTCGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 90 bp | AGTTTGCAAAGGCATCTTGCTTGGGTTGCACAGTTCCAGAAGGCATaGCCATGCTGGGCATGCCCATTCCCATGGTGCCCGACAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLQRHLAWVAQFQKA*PCWACPFPWCPTSP Trigger: TGGGCTTGTCGGGCACCATGGGAATGGGCATGCCCAGCATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | CGCTGTGACATGGGCTCTCTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTAACGGAAACGCGCTCTaGTTCTTATCCCACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RCDMGSLTQRGSRDPHPINGNAL*FLSHSS Trigger: CGAAGAGTGGGATAAGAACAAGAGCGCGTTTCCGTT...AATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAGAGAGCCCATGTCACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | ACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGACATGGGCTCTCCAAGATCAATGGTTTaGGAAGGGTTTGCTGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TQPHPCQSSHRLRCDMGSPRSMV*EGFAVR Trigger: GCGCACAGCAAACCCTTCCAAAACCATTGATCTTGG...AGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | ACTCAGCCCCATCCGTGCCAGTCCTCCCACAGACTACGCTGTGACATGGGCTCTGTTTGCAAAGGCATCTaGCTTGGGTTGCACAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQPHPCQSSHRLRCDMGSVCKGI*LGLHSS Trigger: GGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAAC...AGAGCCCATGTCACAGCGTAGTCTGTGGGAGGACTGGCACGGATGGGGCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS TCA 90 bp | CGATCGTGCTCCCGATCTTGTCGCTCAGCTCGCCCAGCTTGTCACTaGACGGAAACGCGCTCTTGTTCTTATCCCACTCTTCGTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RSCSRSCRSARPACH*TETRSCSYPTLRPI Trigger: AATGGGACGAAGAGTGGGATAAGAACAAGAGCGCGTTTCCGTTCAGTGACAAGCTGGGCGAGCTGAGCGACAAGATCGGGAGCACGATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS TCA 90 bp | CGAAGAGCTCACCACCAGAAGCCACAGGGCCTGATGGGGCTTGGTTaGAGGCACTCCAGTCACCAAAGTCACCATTCCCACTTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRAHHQKPQGLMGLG*RHSSHQSHHSHLLL Trigger: AAGCAACAAGTGGGAATGGTGACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCTGGTGGTGAGCTCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS CCA 90 bp | TGGCTGACGACTGAGGCGTGTGGGTTGAAGCATTCTGATCTGGGCTaGCTTTGTCCCCCGTGTAATGTGCTGCTGCTCCAAGATCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: WLTTEACGLKHSDLG*LCPPCNVLLLQDQW Trigger: CCATTGATCTTGGAGCAGCAGCACATTACACGGGGGACAAAGCCAGCCCAGATCAGAATGCTTCAACCCACACGCCTCAGTCGTCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCTCGTCCCATTTGGACTaGGGCTCAGGATCGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPHLERIFTGETDPDCLISSHLD*GSGSYR Trigger: GCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGA...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS GCA 90 bp | GCTGCTCCAAGATCAATGGTTTTGGAAGGGTTTGCTGTGCGCTTGTaGCGGGTTGTGGTGGTCTCTGTGGCCTGTGTGATGTGGATATGC | + |
|
Preference number: 5 (lower is better) Translates to: AAPRSMVLEGFAVRL*RVVVVSVACVMWIC Trigger: GCATATCCACATCACACAGGCCACAGAGACCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS CCA 90 bp | CTTTGTCCCCCGTGTAATGTGCTGCTGCTCCAAGATCAATGGTTTTaGAAGGGTTTGCTGTGCGCTTGTGCCGGGTTGTGGTGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCPPCNVLLLQDQWF*KGLLCACAGLWWSL Trigger: CAGAGACCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAGCAGCACATTACACGGGGGACAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTGCGCTTGTGCCGGGTaGTGGTGGTCTCTGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSIPTSPIAVTESSSTRCACAG*WWSLWP Trigger: AGGCCACAGAGACCACCACAACCCGGCACAAGCGCA...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACATGGTTTTGGAAGGGTTaGCTGTGCGCTTGTGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVKGNRRAVPRKASQFCTWFWKG*LCACAG Trigger: CCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCA...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | TCACCCCATTTGGAGCGTATCTTCACTGGGGAAACCGATCCTGACTGCCTCATCACTGAGGCGTGTGGGTaGAAGCATTCTGATCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPHLERIFTGETDPDCLITEACG*KHSDLG Trigger: GCCCAGATCAGAATGCTTCAACCCACACGCCTCAGT...GATGAGGCAGTCAGGATCGGTTTCCCCAGTGAAGATACGCTCCAAATGGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCTCTTTCCTCCGGAACTaGCTGATGGTGTCGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: GYKATHRKQLCQVSHCKGSFLRN*LMVSSI Trigger: GATCGACGACACCATCAGCAAGTTCCGGAGGAAAGA...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTGGGTTTGCTGTGCGCTaGTGCCGGGTTGTGGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLPSQHHLLQLQSLLPLAGFAVR*CRVVVV Trigger: GACCACCACAACCCGGCACAAGCGCACAGCAAACCC...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACAACTGAGGCGTGTGGGTaGAAGCATTCTGATCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVKGNRRAVPRKASQFCTTEACG*KHSDLG Trigger: GCCCAGATCAGAATGCTTCAACCCACACGCCTCAGT...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCGGCATCTTGCTTGGGTaGCACAGTTCCAGAAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GYKATHRKQLCQVSHCKGGILLG*HSSRRH Trigger: ATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCC...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 90 bp | GAAACGCGCTCTTGTTCTTATCCCACTCTTCGTCCCATTTGGACTTaGGCTCAGGATCGTACCGCTCATTGTATCGGAATCCACCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: ETRSCSYPTLRPIWT*AQDRTAHCIGIHQR Trigger: GCGTTGGTGGATTCCGATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTGGGATAAGAACAAGAGCGCGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 90 bp | GTGCGCTTGTGCCGGGTTGTGGTGGTCTCTGTGGCCTGTGTGATGTaGATATGCTTCGTCGTCACCGTTTCCTCTTCATCTTTGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: VRLCRVVVVSVACVM*ICFVVTVSSSSLNS Trigger: TGAATTCAAAGATGAAGAGGAAACGGTGACGACGAAGCATATCCACATCACACAGGCCACAGAGACCACCACAACCCGGCACAAGCGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGAACCACATTGGTGGCTTaGTCCACCAGCTCCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGTTLVA*STSSRT Trigger: GGTGCGGGAGCTGGTGGACAAAGCCACCAATGTGGT...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CTGACCCAGAGAGGCTCTCGTGACCCTCACCCCATTTGGAGCGTATCTTCACTGCTCCAGTTCTTTTTGTaGTCTTTTAGCATCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LTQRGSRDPHPIWSVSSLLQFFL*SFSIRD Trigger: GTCCCGGATGCTAAAAGACAACAAAAAGAACTGGAG...CAGTGAAGATACGCTCCAAATGGGGTGAGGGTCACGAGAGCCTCTCTGGGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCCCTGATGGGGCTTGGTaGAAGGCACTCCAGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSIPTSPIAVTESSSTRPDGAW*KALQSP Trigger: TGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGG...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 90 bp | AACTGCTCATACATAAAGGTAGCCTTGGCAATCTCTCCCATGAGCTaGCCAGAAGGTCCCCAGGGATCATCATTCGTTGCTTCTCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: NCSYIKVALAISPMS*PEGPQGSSFVASRT Trigger: GGTTCGAGAAGCAACGAATGATGATCCCTGGGGACCTTCTGGGCAGCTCATGGGAGAGATTGCCAAGGCTACCTTTATGTATGAGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCAGAGAGACCCCGACATACTaGTCTTTGTTCTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSYCQLPAEEGSNPWKLRETPTY*SLFFFA Trigger: AGCAAAGAAGAACAAAGACAAGTATGTCGGGGTCTC...TCTGAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACACACTCTTCGTCCCATTaGGACTTGGGCTCAGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTHSSSH*DLGSGS Trigger: CGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTG...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | GCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCGCTTGGGAAGGGAAATaGCCTGATGCAGCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASSIPTSPIAVTESSSTRAWEGK*PDAAAE Trigger: CTCAGCTGCTGCATCAGGCAATTTCCCTTCCCAAGC...GCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACAGCTTGGGAAGGGAAATaGCCTGATGCAGCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTAWEGK*PDAAAE Trigger: CTCAGCTGCTGCATCAGGCAATTTCCCTTCCCAAGC...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACATTGTCTAGGCTGATGTaGACACTGGGGTCAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: TVKGNRRAVPRKASQFCTLSRLM*TLGSDQ Trigger: TTGGTCTGACCCCAGTGTCAACATCAGCCTAGACAA...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 90 bp | TTGTGCCGGGTTGTGGTGGTCTCTGTGGCCTGTGTGATGTGGATATaGTTCGTCGTCACCGTTTCCTCTTCATCTTTGAATTCACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCRVVVVSVACVMWI*FVVTVSSSSLNSPL Trigger: CAAAGGTGAATTCAAAGATGAAGAGGAAACGGTGACGACGAAGCATATCCACATCACACAGGCCACAGAGACCACCACAACCCGGCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 90 bp | TATTTGCTAAAGTTGGCAAAGTTTGCAAAGGCATCTTGCTTGGGTTaGACAGTTCCAGAAGGCATGGCCATGCTGGGCATGCCCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YLLKLAKFAKASCLG*TVPEGMAMLGMPIP Trigger: GGGAATGGGCATGCCCAGCATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTTTAGCAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS CCA 90 bp | CTCATGAGAGAGAAATTCATGCTCTGGGAAGACGTCATGGTTGCCTaGGATGAGCCCATAAGATCAAACAGGTCTGCCGAGTTTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LMREKFMLWEDVMVA*DEPIRSNRSAEFEA Trigger: TGCCTCAAACTCGGCAGACCTGTTTGATCTTATGGGCTCATCCCAGGCAACCATGACGTCTTCCCAGAGCATGAATTTCTCTCTCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 90 bp | CCAAGTCCCACGGTGTTAGTGCTCATGAGAGAGAAATTCATGCTCTaGGAAGACGTCATGGTTGCCTGGGATGAGCCCATAAGATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPTVLVLMREKFML*EDVMVAWDEPIRSN Trigger: GTTTGATCTTATGGGCTCATCCCAGGCAACCATGACGTCTTCCCAGAGCATGAATTTCTCTCTCATGAGCACTAACACCGTGGGACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCTACTGCCAGCTGCCTGCGGAAGAGGGGTCAAATCCATGGAAACTCAATACCAGGTAGTAAGTaGTCTAGGCTGATGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LTATASCLRKRGQIHGNSIPGSK*SRLMLT Trigger: TGTCAACATCAGCCTAGACAACTTACTACCTGGTAT...TGAGTTTCCATGGATTTGACCCCTCTTCCGCAGGCAGCTGGCAGTAGCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | ACTGTTAAAGGAAACCGCCGAGCAGTCCCAAGAAAGGCTTCCCAGTTCTGCACACACAGCTCCAAAGCTTaGTGTCATCACATTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVKGNRRAVPRKASQFCTHSSKA*CHHIQR Trigger: CCTCTGAATGTGATGACACAAAGCTTTGGAGCTGTG...TGTGCAGAACTGGGAAGCCTTTCTTGGGACTGCTCGGCGGTTTCCTTTAACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | AGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGGCAAAGGCATCTTGCTaGGGTTGCACAGTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RKQLCQVSHCKGSEQPLQAKASC*GCTVPE Trigger: TTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGC...CTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CTGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCTTCGTCCCATTaGGACTTGGGCTCAGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: LLSIFHPNITYCSYRVFFHSSSH*DLGSGS Trigger: CGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTG...GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTTCTTTCCTCCGGAACTaGCTGATGGTGTCGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: HLPSQHHLLQLQSLLPLASFLRN*LMVSSI Trigger: GATCGACGACACCATCAGCAAGTTCCGGAGGAAAGA...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CTGCTTAGCATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCAGGAGAGGGTTAGTTaGAGGCCGGACAGGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSIFHPNITYCSYRVFFQERVS*RPDRKH Trigger: ATGCTTCCTGTCCGGCCTCAAACTAACCCTCTCCTG...GAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATGCTAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGAGGCATCTTGCTTGGGTaGCACAGTTCCAGAAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGGILLG*HSSRRH Trigger: ATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCC...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACAGTTTGCAAAGGCATCTaGCTTGGGTTGCACAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTVCKGI*LGLHSS Trigger: GGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAAC...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 90 bp | CCAGGGATCATCATTCGTTGCTTCTCGAACCTTAGACTCAATCTCTaGGTAATTCATAACCACATTGGTGGCTTTGTCCACCAGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGIIIRCFSNLRLNL*VIHNHIGGFVHQLP Trigger: CGGGAGCTGGTGGACAAAGCCACCAATGTGGTTATGAATTACTCAGAGATTGAGTCTAAGGTTCGAGAAGCAACGAATGATGATCCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 90 bp | TCTTTTAGCATCCGGGACCAAAGCATGTTCATGAGTTCTGGGAACTaGTCATACATAAAGGTAGCCTTGGCAATCTCTCCCATGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SFSIRDQSMFMSSGN*SYIKVALAISPMSC Trigger: GCAGCTCATGGGAGAGATTGCCAAGGCTACCTTTATGTATGAGCAGTTCCCAGAACTCATGAACATGCTTTGGTCCCGGATGCTAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | AGACCCAATCATGACAAGGCGATTGAGGGACAGAAAAATCAAGTTCCTCAGGGAAACGGAAACGCGCTCTaGTTCTTATCCCACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPNHDKAIEGQKNQVPQGNGNAL*FLSHSS Trigger: CGAAGAGTGGGATAAGAACAAGAGCGCGTTTCCGTT...TCCCTGAGGAACTTGATTTTTCTGTCCCTCAATCGCCTTGTCATGATTGGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | GGCTACAAGGCTACGCACAGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCCACATTCAGAGGCTGTaGCATATTCTGTTGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GYKATHRKQLCQVSHCKGHIQRL*HILLLN Trigger: ATTCAACAACAGAATATGCAACAGCCTCTGAATGTG...GCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCTGTGCGTAGCCTTGTAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACACACAGCTCCAAAGCTTaGTGTCATCACATTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTHSSKA*CHHIQR Trigger: CCTCTGAATGTGATGACACAAAGCTTTGGAGCTGTG...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTGCAAAGGCATCTTGCTaGGGTTGCACAGTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLPSQHHLLQLQSLLPLAAKASC*GCTVPE Trigger: TTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGC...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS TCA 90 bp | CTCAGGATCGTACCGCTCATTGTATCGGAATCCACCAACGCTGTCTaGAGAGACCCCGACATACTTGTCTTTGTTCTTCTTTGCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRIVPLIVSESTNAV*RDPDILVFVLLCFL Trigger: AAGAAAGCAAAGAAGAACAAAGACAAGTATGTCGGGGTCTCTTCAGACAGCGTTGGTGGATTCCGATACAATGAGCGGTACGATCCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | GATCATCCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAAGGGTTTGCTGTGCGCTaGTGCCGGGTTGTGGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DHPTLMISSMDLRVVVKEGFAVR*CRVVVV Trigger: GACCACCACAACCCGGCACAAGCGCACAGCAAACCC...TTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGGATGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | CCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAACAGACCTGGTTTTGGAAGGGTTaGCTGTGCGCTTGTGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PTLMISSMDLRVVVKEQTWFWKG*LCACAG Trigger: CCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCA...GGTCTGTTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | AGGAAACAGCTTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGATACCAGGTAGTAAGTaGTCTAGGCTGATGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RKQLCQVSHCKGSEQPLQIPGSK*SRLMLT Trigger: TGTCAACATCAGCCTAGACAACTTACTACCTGGTAT...CTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAAGCTGTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTCTCCAGTTCTTTTTGTaGTCTTTTAGCATCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HLPSQHHLLQLQSLLPLALQFFL*SFSIRD Trigger: GTCCCGGATGCTAAAAGACAACAAAAAGAACTGGAG...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTGAGACCCCGACATACTaGTCTTTGTTCTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLPSQHHLLQLQSLLPLAETPTY*SLFFFA Trigger: AGCAAAGAAGAACAAAGACAAGTATGTCGGGGTCTC...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | TTTGCCAAGTCAGTCACTGCAAAGGCAGTGAACAACCGCTACAGACAGACAACATCTTTGAATTCACCTTaGGGAGATCTACCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FAKSVTAKAVNNRYRQTTSLNSP*GDLPLL Trigger: AAGAAGAGGTAGATCTCCCAAAGGTGAATTCAAAGA...TGTTGTCTGTCTGTAGCGGTTGTTCACTGCCTTTGCAGTGACTGACTTGGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS-3UTR CAA 90 bp | CATCTTCCATCCCAACATCACCTATTGCAGTTACAGAGTCTTCTTCCACTCGCTTCTTTGAATTCACCTTaGGGAGATCTACCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLPSQHHLLQLQSLLPLASLNSP*GDLPLL Trigger: AAGAAGAGGTAGATCTCCCAAAGGTGAATTCAAAGA...AGCGAGTGGAAGAAGACTCTGTAACTGCAATAGGTGATGTTGGGATGGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | CCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAACAGACCTTGTCTAGGCTGATGTaGACACTGGGGTCAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: PTLMISSMDLRVVVKEQTLSRLM*TLGSDQ Trigger: TTGGTCTGACCCCAGTGTCAACATCAGCCTAGACAA...GGTCTGTTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS GCA 90 bp | CTTCTTTGCTTTCTTTCGCTCTTCTCGAAGCCTGTCATCATCCTGTaGAAACTCAACCAGTTCCTTTACTTTCTGTCGAATGTTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: LLCFLSLFSKPVIIL*KLNQFLYFLSNVYT Trigger: GGTATAAACATTCGACAGAAAGTAAAGGAACTGGTTGAGTTTGCACAGGATGATGACAGGCTTCGAGAAGAGCGAAAGAAAGCAAAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | GATCATCCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAACCAAGATCAATGGTTTaGGAAGGGTTTGCTGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DHPTLMISSMDLRVVVKEPRSMV*EGFAVR Trigger: GCGCACAGCAAACCCTTCCAAAACCATTGATCTTGG...TTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGGATGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS-3UTR CAA 90 bp | GATCATCCAACTTTAATGATTTCATCTATGGACTTGAGAGTGGTAGTAAAGGAACTTCTCCAGTTCTTTTaGTTGTCTTTTAGCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DHPTLMISSMDLRVVVKELLQFF*LSFSIR Trigger: CCGGATGCTAAAAGACAACAAAAAGAACTGGAGAAG...TTCCTTTACTACCACTCTCAAGTCCATAGATGAAATCATTAAAGTTGGATGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS GCA 72 bp | AAGGCATGGCCATGCTGGGCATGCCCATTCCCATGGTaGCCGACAAGCCCATCCCCGAGGCCGACATCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KAWPCWACPFPW*PTSPSPRPTSP Trigger: TGGGGATGTCGGCCTCGGGGATGGGCTTGTCGGGCACCATGGGAATGGGCATGCCCAGCATGGCCATGCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | CAGAAGGCATGGCCATGCTGGGCATGCCCATTCCCATaGTGCCCGACAAGCCCATCCCCGAGGCCGACATCC | + |
|
Preference number: 6 (lower is better) Translates to: QKAWPCWACPFP*CPTSPSPRPTS Trigger: GGATGTCGGCCTCGGGGATGGGCTTGTCGGGCACCATGGGAATGGGCATGCCCAGCATGGCCATGCCTTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | AGGCCGACATCCCCATGTTCATGTTCATGCCCACCATaGCCTGGCTCATCCCTGCGCTGTTCCCCAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPTSPCSCSCPP*PGSSLRCSPEG Trigger: CCCCTCTGGGGAACAGCGCAGGGATGAGCCAGGGCATGGTGGGCATGAACATGAACATGGGGATGTCGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | GGTCCCCCGAGGACTTGCTGCTCGGCACCGATGGCTTaGCTGACGACTGAGGCGTGTGGGTTGAAGCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPPRTCCSAPMA*LTTEACGLKHS Trigger: AGAATGCTTCAACCCACACGCCTCAGTCGTCAGCCAAGCCATCGGTGCCGAGCAGCAAGTCCTCGGGGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 72 bp | CCGGAGAGTCCTCCCGGTCTTTCCTCCGGAACTTGCTaGTGGTGTCGTCGATCGTGCTCCCGATCTTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PESPPGLSSGTC*WCRRSCSRSCR Trigger: GCGACAAGATCGGGAGCACGATCGACGACACCATCAGCAAGTTCCGGAGGAAAGACCGGGAGGACTCTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | TGCCATCAAACAGGTCAACGAGGTCCCCCGAGGACTTaGTGCTCGGCACCGATGGCTTGGCTGACGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: CHQTGQRGPPRT*CSAPMAWLTTE Trigger: CTCAGTCGTCAGCCAAGCCATCGGTGCCGAGCAGCAAGTCCTCGGGGGACCTCGTTGACCTGTTTGATGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | GCTTGGGTTGCACAGTTCCAGAAGGCATGGCCATGCTaGGCATGCCCATTCCCATGGTGCCCGACAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AWVAQFQKAWPC*ACPFPWCPTSP Trigger: TGGGCTTGTCGGGCACCATGGGAATGGGCATGCCCAGCATGGCCATGCCTTCTGGAACTGTGCAACCCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | TCGCTGCACCTTTCCGGAGAGTCCTCCCGGTCTTTCCTCCGGAACTaGCTGATGGTGTCGTCGATCGTGCTCCCGATCTTGTCGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLHLSGESSRSFLRN*LMVSSIVLPILSLS Trigger: GCTGAGCGACAAGATCGGGAGCACGATCGACGACACCATCAGCAAGTTCCGGAGGAAAGACCGGGAGGACTCTCCGGAAAGGTGCAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | TTCCTCCGGAACTTGCTGATGGTGTCGTCGATCGTGCTCCCGATCTaGTCGCTCAGCTCGCCCAGCTTGTCACTGAACGGAAACGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLRNLLMVSSIVLPI*SLSSPSLSLNGNAL Trigger: GAGCGCGTTTCCGTTCAGTGACAAGCTGGGCGAGCTGAGCGACAAGATCGGGAGCACGATCGACGACACCATCAGCAAGTTCCGGAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | TGCTGCTCGGCACCGATGGCTTGGCTGACGACTGAGGCGTGTGGGTaGAAGCATTCTGATCTGGGCTGGCTTTGTCCCCCGTGTAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: CCSAPMAWLTTEACG*KHSDLGWLCPPCNV Trigger: CACATTACACGGGGGACAAAGCCAGCCCAGATCAGAATGCTTCAACCCACACGCCTCAGTCGTCAGCCAAGCCATCGGTGCCGAGCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 72 bp | CACCACCAGAAGCCACAGGGCCTGATGGGGCTTGGTTaGAGGCACTCCAGTCACCAAAGTCACCATTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HHQKPQGLMGLG*RHSSHQSHHSH Trigger: GTGGGAATGGTGACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCTGGTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 72 bp | ACTGCCGAAGAGCTCACCACCAGAAGCCACAGGGCCTaGTGGGGCTTGGTTGAAGGCACTCCAGTCACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TAEELTTRSHRA*WGLVEGTPVTK Trigger: TTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCTGGTGGTGAGCTCTTCGGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | CTTTCCGGAGAGTCCTCCCGGTCTTTCCTCCGGAACTaGCTGATGGTGTCGTCGATCGTGCTCCCGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSGESSRSFLRN*LMVSSIVLPIL Trigger: CAAGATCGGGAGCACGATCGACGACACCATCAGCAAGTTCCGGAGGAAAGACCGGGAGGACTCTCCGGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | GTGTCGTCGATCGTGCTCCCGATCTTGTCGCTCAGCTCGCCCAGCTaGTCACTGAACGGAAACGCGCTCTTGTTCTTATCCCACTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: VSSIVLPILSLSSPS*SLNGNALLFLSHSS Trigger: CGAAGAGTGGGATAAGAACAAGAGCGCGTTTCCGTTCAGTGACAAGCTGGGCGAGCTGAGCGACAAGATCGGGAGCACGATCGACGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | CCGAAGAGCTCACCACCAGAAGCCACAGGGCCTGATGGGGCTTGGTaGAAGGCACTCCAGTCACCAAAGTCACCATTCCCACTTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PKSSPPEATGPDGAW*KALQSPKSPFPLVA Trigger: AGCAACAAGTGGGAATGGTGACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCTGGTGGTGAGCTCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | AGCTCACCACCAGAAGCCACAGGGCCTGATGGGGCTTaGTTGAAGGCACTCCAGTCACCAAAGTCACCATTC | + |
|
Preference number: 6 (lower is better) Translates to: SSPPEATGPDGA*LKALQSPKSPF Trigger: GAATGGTGACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCTGGTGGTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | AACTTGCTGATGGTGTCGTCGATCGTGCTCCCGATCTaGTCGCTCAGCTCGCCCAGCTTGTCACTGAACGGA | + |
|
Preference number: 6 (lower is better) Translates to: NLLMVSSIVLPI*SLSSPSLSLNG Trigger: TCCGTTCAGTGACAAGCTGGGCGAGCTGAGCGACAAGATCGGGAGCACGATCGACGACACCATCAGCAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | TCACCACCAGAAGCCACAGGGCCTGATGGGGCTTGGTaGAAGGCACTCCAGTCACCAAAGTCACCATTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPEATGPDGAW*KALQSPKSPFP Trigger: TGGGAATGGTGACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCAGGCCCTGTGGCTTCTGGTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | CCGTGTAATGTGCTGCTGCTCCAAGATCAATGGTTTTGGAAGGGTTaGCTGTGCGCTTGTGCCGGGTTGTGGTGGTCTCTGTGGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PCNVLLLQDQWFWKG*LCACAGLWWSLWPV Trigger: CACAGGCCACAGAGACCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAGCAGCACATTACACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | AGCGATGGCTGCTGGGGCTTGGAAGGCTGCATACCAGGTAGTAAGTaGTCTAGGCTGATGTTGACACTGGGGTCAGACCAAGTAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SDGCWGLEGCIPGSK*SRLMLTLGSDQVEG Trigger: GCCCTCTACTTGGTCTGACCCCAGTGTCAACATCAGCCTAGACAACTTACTACCTGGTATGCAGCCTTCCAAGCCCCAGCAGCCATCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 72 bp | GCTTGTGCCGGGTTGTGGTGGTCTCTGTGGCCTGTGTaGTGTGGATATGCTTCGTCGTCACCGTTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ACAGLWWSLWPV*CGYASSSPFPL Trigger: AAGAGGAAACGGTGACGACGAAGCATATCCACATCACACAGGCCACAGAGACCACCACAACCCGGCACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | CTGCTCCAAGATCAATGGTTTTGGAAGGGTTTGCTGTaGGCTTGTGCCGGGTTGTGGTGGTCTCTGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLQDQWFWKGLL*ACAGLWWSLWP Trigger: AGGCCACAGAGACCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | ACTGAGGCGTGTGGGTTGAAGCATTCTGATCTGGGCTaGCTTTGTCCCCCGTGTAATGTGCTGCTGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TEACGLKHSDLG*LCPPCNVLLLQ Trigger: TTGGAGCAGCAGCACATTACACGGGGGACAAAGCCAGCCCAGATCAGAATGCTTCAACCCACACGCCTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | CCAAGATCAATGGTTTTGGAAGGGTTTGCTGTGCGCTaGTGCCGGGTTGTGGTGGTCTCTGTGGCCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRSMVLEGFAVR*CRVVVVSVACV Trigger: CACACAGGCCACAGAGACCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | GTGCTGCTGCTCCAAGATCAATGGTTTTGGAAGGGTTaGCTGTGCGCTTGTGCCGGGTTGTGGTGGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLLLQDQWFWKG*LCACAGLWWSL Trigger: CAGAGACCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAGCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | TTGTCGCTCAGCTCGCCCAGCTTGTCACTGAACGGAAACGCGCTCTaGTTCTTATCCCACTCTTCGTCCCATTTGGACTTGGGCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSLSSPSLSLNGNAL*FLSHSSSHLDLGSG Trigger: TCCTGAGCCCAAGTCCAAATGGGACGAAGAGTGGGATAAGAACAAGAGCGCGTTTCCGTTCAGTGACAAGCTGGGCGAGCTGAGCGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | GCTGCTGCTCCAAGATCAATGGTTTTGGAAGGGTTTGCTGTGCGCTaGTGCCGGGTTGTGGTGGTCTCTGTGGCCTGTGTGATGTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: AAAPRSMVLEGFAVR*CRVVVVSVACVMWI Trigger: TATCCACATCACACAGGCCACAGAGACCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | GGCTTGGAAGGCTGCATACCAGGTAGTAAGTTGTCTAGGCTGATGTaGACACTGGGGTCAGACCAAGTAGAGGGCAGGGTTTTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLEGCIPGSKLSRLM*TLGSDQVEGRVLLA Trigger: GGCCAGCAAAACCCTGCCCTCTACTTGGTCTGACCCCAGTGTCAACATCAGCCTAGACAACTTACTACCTGGTATGCAGCCTTCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 72 bp | TCCCGATCTTGTCGCTCAGCTCGCCCAGCTTGTCACTaGACGGAAACGCGCTCTTGTTCTTATCCCACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRSCRSARPACH*TETRSCSYPTL Trigger: AAGAGTGGGATAAGAACAAGAGCGCGTTTCCGTTCAGTGACAAGCTGGGCGAGCTGAGCGACAAGATCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | AGATCAATGGTTTTGGAAGGGTTTGCTGTGCGCTTGTaGCGGGTTGTGGTGGTCTCTGTGGCCTGTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RSMVLEGFAVRL*RVVVVSVACVM Trigger: CATCACACAGGCCACAGAGACCACCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | TGCCGGGTTGTGGTGGTCTCTGTGGCCTGTGTGATGTaGATATGCTTCGTCGTCACCGTTTCCTCTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: CRVVVVSVACVM*ICFVVTVSSSS Trigger: AGATGAAGAGGAAACGGTGACGACGAAGCATATCCACATCACACAGGCCACAGAGACCACCACAACCCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | CCGTGTAATGTGCTGCTGCTCCAAGATCAATGGTTTTaGAAGGGTTTGCTGTGCGCTTGTGCCGGGTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PCNVLLLQDQWF*KGLLCACAGLW Trigger: CCACAACCCGGCACAAGCGCACAGCAAACCCTTCCAAAACCATTGATCTTGGAGCAGCAGCACATTACACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | CACTCTTCGTCCCATTTGGACTTGGGCTCAGGATCGTACCGCTCATaGTATCGGAATCCACCAACGCTGTCTGAAGAGACCCCGACATAC | + |
|
Preference number: 6 (lower is better) Translates to: HSSSHLDLGSGSYRS*YRNPPTLSEETPTY Trigger: GTATGTCGGGGTCTCTTCAGACAGCGTTGGTGGATTCCGATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | CTGATCTGGGCTGGCTTTGTCCCCCGTGTAATGTGCTaGTGCTCCAAGATCAATGGTTTTGGAAGGGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LIWAGFVPRVMC*CSKINGFGRVC Trigger: GCAAACCCTTCCAAAACCATTGATCTTGGAGCAGCAGCACATTACACGGGGGACAAAGCCAGCCCAGATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | GACCAAGTAGAGGGCAGGGTTTTGCTGGCCGACTTCTaGACCATATCTGTATTCTGTGATCTGGACATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DQVEGRVLLADF*TISVFCDLDMG Trigger: GCCCATGTCCAGATCACAGAATACAGATATGGTCCAGAAGTCGGCCAGCAAAACCCTGCCCTCTACTTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109260.3 |
||
| CDS CAA 72 bp | TCCCATTTGGACTTGGGCTCAGGATCGTACCGCTCATaGTATCGGAATCCACCAACGCTGTCTGAAGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: SHLDLGSGSYRS*YRNPPTLSEET Trigger: GGTCTCTTCAGACAGCGTTGGTGGATTCCGATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS CAA 72 bp | TGCTGGGGCTTGGAAGGCTGCATACCAGGTAGTAAGTaGTCTAGGCTGATGTTGACACTGGGGTCAGACCAA | + |
|
Preference number: 6 (lower is better) Translates to: CWGLEGCIPGSK*SRLMLTLGSDQ Trigger: TTGGTCTGACCCCAGTGTCAACATCAGCCTAGACAACTTACTACCTGGTATGCAGCCTTCCAAGCCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS CAA 90 bp | GGAAACGCGCTCTTGTTCTTATCCCACTCTTCGTCCCATTTGGACTaGGGCTCAGGATCGTACCGCTCATTGTATCGGAATCCACCAACG | + |
|
Preference number: 6 (lower is better) Translates to: GNALLFLSHSSSHLD*GSGSYRSLYRNPPT Trigger: CGTTGGTGGATTCCGATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTGGGATAAGAACAAGAGCGCGTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS CAA 90 bp | AGGCTGATGTTGACACTGGGGTCAGACCAAGTAGAGGGCAGGGTTTaGCTGGCCGACTTCTGGACCATATCTGTATTCTGTGATCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLMLTLGSDQVEGRV*LADFWTISVFCDLD Trigger: GTCCAGATCACAGAATACAGATATGGTCCAGAAGTCGGCCAGCAAAACCCTGCCCTCTACTTGGTCTGACCCCAGTGTCAACATCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109260.3 |
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| CDS CAA 90 bp | CTGAACGGAAACGCGCTCTTGTTCTTATCCCACTCTTCGTCCCATTaGGACTTGGGCTCAGGATCGTACCGCTCATTGTATCGGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LNGNALLFLSHSSSH*DLGSGSYRSLYRNP Trigger: TGGATTCCGATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTGGGATAAGAACAAGAGCGCGTTTCCGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS GCA 72 bp | TACATAAAGGTAGCCTTGGCAATCTCTCCCATGAGCTaGCCAGAAGGTCCCCAGGGATCATCATTCGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: YIKVALAISPMS*PEGPQGSSFVA Trigger: AGCAACGAATGATGATCCCTGGGGACCTTCTGGGCAGCTCATGGGAGAGATTGCCAAGGCTACCTTTATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS GCA 72 bp | AAGTTGGCAAAGTTTGCAAAGGCATCTTGCTTGGGTTaGACAGTTCCAGAAGGCATGGCCATGCTGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: KLAKFAKASCLG*TVPEGMAMLGM Trigger: CATGCCCAGCATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | ACGCGCTCTTGTTCTTATCCCACTCTTCGTCCCATTTaGACTTGGGCTCAGGATCGTACCGCTCATTGTATC | + |
|
Preference number: 6 (lower is better) Translates to: TRSCSYPTLRPI*TWAQDRTAHCI Trigger: GATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTGGGATAAGAACAAGAGCGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | GAGAAATTCATGCTCTGGGAAGACGTCATGGTTGCCTaGGATGAGCCCATAAGATCAAACAGGTCTGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: EKFMLWEDVMVA*DEPIRSNRSAE Trigger: CTCGGCAGACCTGTTTGATCTTATGGGCTCATCCCAGGCAACCATGACGTCTTCCCAGAGCATGAATTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 72 bp | GAGAGGGTTAGTTTGAGGCCGGACAGGAAGCATGTTTaGTGGAGAACTGAGGTTCACAGCTCCAAAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ERVSLRPDRKHV*WRTEVHSSKAL Trigger: CAAAGCTTTGGAGCTGTGAACCTCAGTTCTCCATCAAACATGCTTCCTGTCCGGCCTCAAACTAACCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | ATTCTGATCTGGGCTGGCTTTGTCCCCCGTGTAATGTaGTGCTGCTCCAAGATCAATGGTTTTGGAAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ILIWAGFVPRVM*CCSKINGFGRV Trigger: AACCCTTCCAAAACCATTGATCTTGGAGCAGCAGCACATTACACGGGGGACAAAGCCAGCCCAGATCAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | AGTCACCATTCCCACTTGTTGCTTGGGAAGGGAAATTaGCTGATGCAGCAGCTGAGCCAAAGTCAGCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: SHHSHLLLGKGN*LMQQLSQSQQI Trigger: GATTTGCTGACTTTGGCTCAGCTGCTGCATCAGGCAATTTCCCTTCCCAAGCAACAAGTGGGAATGGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | AACGCGCTCTTGTTCTTATCCCACTCTTCGTCCCATTaGGACTTGGGCTCAGGATCGTACCGCTCATTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: NALLFLSHSSSH*DLGSGSYRSLY Trigger: ATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTGGGATAAGAACAAGAGCGCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | AAAGTTGGCAAAGTTTGCAAAGGCATCTTGCTTGGGTaGCACAGTTCCAGAAGGCATGGCCATGCTGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KVGKVCKGILLG*HSSRRHGHAGH Trigger: ATGCCCAGCATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | TTATTTGCTAAAGTTGGCAAAGTTTGCAAAGGCATCTTGCTTGGGTaGCACAGTTCCAGAAGGCATGGCCATGCTGGGCATGCCCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: LFAKVGKVCKGILLG*HSSRRHGHAGHAHS Trigger: GGAATGGGCATGCCCAGCATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTTTAGCAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | ATCCGGGACCAAAGCATGTTCATGAGTTCTGGGAACTaGTCATACATAAAGGTAGCCTTGGCAATCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IRDQSMFMSSGN*SYIKVALAISP Trigger: GGGAGAGATTGCCAAGGCTACCTTTATGTATGAGCAGTTCCCAGAACTCATGAACATGCTTTGGTCCCGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | GTTGTGGTGGTCTCTGTGGCCTGTGTGATGTGGATATaGTTCGTCGTCACCGTTTCCTCTTCATCTTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VVVVSVACVMWI*FVVTVSSSSLN Trigger: ATTCAAAGATGAAGAGGAAACGGTGACGACGAAGCATATCCACATCACACAGGCCACAGAGACCACCACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CCA 72 bp | TCTTGTTCTTATCCCACTCTTCGTCCCATTTGGACTTaGGCTCAGGATCGTACCGCTCATTGTATCGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: SCSYPTLRPIWT*AQDRTAHCIGI Trigger: GATTCCGATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTGGGATAAGAACAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | CTCTTGTTCTTATCCCACTCTTCGTCCCATTTGGACTaGGGCTCAGGATCGTACCGCTCATTGTATCGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLFLSHSSSHLD*GSGSYRSLYRN Trigger: ATTCCGATACAATGAGCGGTACGATCCTGAGCCCAAGTCCAAATGGGACGAAGAGTGGGATAAGAACAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | TTGCTAAAGTTGGCAAAGTTTGCAAAGGCATCTTGCTaGGGTTGCACAGTTCCAGAAGGCATGGCCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLKLAKFAKASC*GCTVPEGMAML Trigger: CAGCATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTTTAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | CGGAATCCACCAACGCTGTCTGAAGAGACCCCGACATACTTGTCTTaGTTCTTCTTTGCTTTCTTTCGCTCTTCTCGAAGCCTGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: RNPPTLSEETPTYLS*FFFAFFRSSRSLSS Trigger: TGATGACAGGCTTCGAGAAGAGCGAAAGAAAGCAAAGAAGAACAAAGACAAGTATGTCGGGGTCTCTTCAGACAGCGTTGGTGGATTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 90 bp | CAACGCTGTCTGAAGAGACCCCGACATACTTGTCTTTGTTCTTCTTaGCTTTCTTTCGCTCTTCTCGAAGCCTGTCATCATCCTGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QRCLKRPRHTCLCSS*LSFALLEACHHPVQ Trigger: TTGCACAGGATGATGACAGGCTTCGAGAAGAGCGAAAGAAAGCAAAGAAGAACAAAGACAAGTATGTCGGGGTCTCTTCAGACAGCGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS TCA 72 bp | GTACCGCTCATTGTATCGGAATCCACCAACGCTGTCTaGAGAGACCCCGACATACTTGTCTTTGTTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VPLIVSESTNAV*RDPDILVFVLL Trigger: AAGAAGAACAAAGACAAGTATGTCGGGGTCTCTTCAGACAGCGTTGGTGGATTCCGATACAATGAGCGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS GCA 72 bp | TATTTGCTAAAGTTGGCAAAGTTTGCAAAGGCATCTTaGTTGGGTTGCACAGTTCCAGAAGGCATGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: YLLKLAKFAKAS*LGCTVPEGMAM Trigger: CATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTTTAGCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
||
| CDS CAA 72 bp | CTGAAGAGACCCCGACATACTTGTCTTTGTTCTTCTTaGCTTTCTTTCGCTCTTCTCGAAGCCTGTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LKRPRHTCLCSS*LSFALLEACHH Trigger: ATGATGACAGGCTTCGAGAAGAGCGAAAGAAAGCAAAGAAGAACAAAGACAAGTATGTCGGGGTCTCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS CAA 72 bp | TTATTTGCTAAAGTTGGCAAAGTTTGCAAAGGCATCTaGCTTGGGTTGCACAGTTCCAGAAGGCATGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LFAKVGKVCKGI*LGLHSSRRHGH Trigger: ATGGCCATGCCTTCTGGAACTGTGCAACCCAAGCAAGATGCCTTTGCAAACTTTGCCAACTTTAGCAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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| CDS TCA 72 bp | ATCATTCGTTGCTTCTCGAACCTTAGACTCAATCTCTaGGTAATTCATAACCACATTGGTGGCTTTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: IIRCFSNLRLNL*VIHNHIGGFVH Trigger: GTGGACAAAGCCACCAATGTGGTTATGAATTACTCAGAGATTGAGTCTAAGGTTCGAGAAGCAACGAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109260.3 ENSMUST00000109261.11 |
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