Pregenerated sensors for CLIC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022949Ensembl transcript IDs: ENSMUST00000023670.4, ENSMUST00000162181.8
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GAAGCAAGATACCCTGGTCCCATTATCCTAGGTCCTGCTGTCCCTTaGTTCTGCAAGAGGCTCTCCAAGCCCCTGTGTGGCTCAGCAGGG | + |
Preference number: 1 (lower is better) Translates to: EARYPGPIILGPAVP*FCKRLSKPLCGSAG Trigger: CCCTGCTGAGCCACACAGGGGCTTGGAGAGCCTCTTGCAGAACCAAGGGACAGCAGGACCTAGGATAATGGGACCAGGGTATCTTGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR TCA 90 bp | GGTTTACACTGTGATATAAGGCAGGGAGAGTCTCCAAGCCAGAGCTaGCAGGAAGAGTCCCCAGGAAAGCACAGTCCCTCTGGGGGAGTG | + |
Preference number: 1 (lower is better) Translates to: GLHCDIRQGESPSQS*QEESPGKHSPSGGV Trigger: CACTCCCCCAGAGGGACTGTGCTTTCCTGGGGACTCTTCCTGTCAGCTCTGGCTTGGAGACTCTCCCTGCCTTATATCACAGTGTAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CCA 90 bp | AAAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCTCCACACCTaGGCTCAGAGCAACAACATCCTTAAAGCAGAAGCAAGATACCCT | + |
Preference number: 1 (lower is better) Translates to: KRSRPKGTGNPLLHT*AQSNNILKAEARYP Trigger: AGGGTATCTTGCTTCTGCTTTAAGGATGTTGTTGCTCTGAGCCCAGGTGTGGAGGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR CCA 90 bp | AGGGAGAGTCTCCAAGCCAGAGCTGACAGGAAGAGTCCCCAGGAAAGCACAGTCAGGCCCCGCATCCTATaGTGGCATTTAGAGAGTCAG | + |
Preference number: 2 (lower is better) Translates to: RESLQARADRKSPQESTVRPRIL*WHLESQ Trigger: CTGACTCTCTAAATGCCACCATAGGATGCGGGGCCT...GACTGTGCTTTCCTGGGGACTCTTCCTGTCAGCTCTGGCTTGGAGACTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR CCA 90 bp | AGGAAAGCACAGTCCCTCTGGGGGAGTGAGAACAATGGGTTCCAGAAAAGGAGTGGTCCTGCTGTCCCTTaGTTCTGCAAGAGGCTCTCC | + |
Preference number: 2 (lower is better) Translates to: RKAQSLWGSENNGFQKRSGPAVP*FCKRLS Trigger: GGAGAGCCTCTTGCAGAACCAAGGGACAGCAGGACC...ACTCCTTTTCTGGAACCCATTGTTCTCACTCCCCCAGAGGGACTGTGCTTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR GCA 90 bp | GACTATTGGACTGAAGCCACAGCTTCCAAGAAACAAGAAAATGTAGTGGCCACCGCTGTCCCTTGGTTCTaGAAGAGGCTCTCCAAGCCC | + |
Preference number: 2 (lower is better) Translates to: DYWTEATASKKQENVVATAVPWF*KRLSKP Trigger: GGGCTTGGAGAGCCTCTTGCAGAACCAAGGGACAGC...GGTGGCCACTACATTTTCTTGTTTCTTGGAAGCTGTGGCTTCAGTCCAATAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR TCA 90 bp | GGTGGCCCCAAGAATGATGGAGGGAATGCCACAAGCACACCAGAAACTCCTCAATGTAGGTTTACACTGTaGTATAAGGCAGGGAGAGTC | + |
Preference number: 2 (lower is better) Translates to: GGPKNDGGNATSTPETPQCRFTL*YKAGRV Trigger: GACTCTCCCTGCCTTATATCACAGTGTAAACCTACA...TTGAGGAGTTTCTGGTGTGCTTGTGGCATTCCCTCCATCATTCTTGGGGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR CCA 90 bp | TTAAAATGCCAAGAACTTAAGTCAAAGCCTGTTTGCCCTGAAACAAGCTACAAAAACAGAGGGCTCTCCTaGAAGGCCCGCCCACTCATC | + |
Preference number: 2 (lower is better) Translates to: LKCQELKSKPVCPETSYKNRGLS*KARPLI Trigger: GATGAGTGGGCGGGCCTTCCAGGAGAGCCCTCTGTT...TTTGTAGCTTGTTTCAGGGCAAACAGGCTTTGACTTAAGTTCTTGGCATTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR CCA 90 bp | AAACTCCCAACCATCAACTCATTTACCAAGTTTGAATGTCACAAGAGCTTAACACCTCTCCTCCACACCTaGGCTCAGAGCAACAACATC | + |
Preference number: 2 (lower is better) Translates to: KLPTINSFTKFECHKSLTPLLHT*AQSNNI Trigger: GATGTTGTTGCTCTGAGCCCAGGTGTGGAGGAGAGG...TGTTAAGCTCTTGTGACATTCAAACTTGGTAAATGAGTTGATGGTTGGGAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR GCA 90 bp | GACTATTGGACTGAAGCCACAGCTTCCAAGAAACAAGAAAATGTAGTGGCCACCAGGAGATCCCTTCATTaGTTTCTTACACAAATGCCA | + |
Preference number: 2 (lower is better) Translates to: DYWTEATASKKQENVVATRRSLH*FLTQMP Trigger: TGGCATTTGTGTAAGAAAGCAATGAAGGGATCTCCT...GGTGGCCACTACATTTTCTTGTTTCTTGGAAGCTGTGGCTTCAGTCCAATAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR TCA 90 bp | ACCAGAAACTCCTCAACTTCTCAGGAAAGGACCATTTTCCAGAAAAGCTTAAGAGCATACATGAAAGATTaGCCGATTCTGGAAACATTC | + |
Preference number: 2 (lower is better) Translates to: TRNSSTSQERTIFQKSLRAYMKD*PILETF Trigger: GAATGTTTCCAGAATCGGTCAATCTTTCATGTATGC...TCTTAAGCTTTTCTGGAAAATGGTCCTTTCCTGAGAAGTTGAGGAGTTTCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR CCA 90 bp | ACAAGAAAATGTAGTGGCCACCATATTGGACTTTGTTTCCTTTCGAGATATTTTACATTTCCTCATTCATaGTTAGGCTGGAACAGGCCT | + |
Preference number: 2 (lower is better) Translates to: TRKCSGHHIGLCFLSRYFTFPHS*LGWNRP Trigger: AGGCCTGTTCCAGCCTAACCATGAATGAGGAAATGT...AAAATATCTCGAAAGGAAACAAAGTCCAATATGGTGGCCACTACATTTTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CAA 90 bp | ATATGTGATGTATGTGCACGCATGAGCACAGGCATACATGAAAGATaGACCGATTCTGGAAACATTCATCAAATTGTCATCAGAAAATAT | + |
Preference number: 2 (lower is better) Translates to: ICDVCARMSTGIHER*TDSGNIHQIVIRKY Trigger: ATATTTTCTGATGACAATTTGATGAATGTTTCCAGAATCGGTCAATCTTTCATGTATGCCTGTGCTCATGCGTGCACATACATCACATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR-3UTR CCA 90 bp | AAACTCCCAACCATCAACTCATTTACCAAGTTTGAATGTCACAAGAGCTTAACATTCTGGATTTTCATCTaGAATTCAGTTTTCCTGCTT | + |
Preference number: 2 (lower is better) Translates to: KLPTINSFTKFECHKSLTFWIFI*NSVFLL Trigger: AAGCAGGAAAACTGAATTCCAGATGAAAATCCAGAA...TGTTAAGCTCTTGTGACATTCAAACTTGGTAAATGAGTTGATGGTTGGGAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR GCA 72 bp | GGTCCCATTATCCTAGGTCCTGCTGTCCCTTGGTTCTaGAAGAGGCTCTCCAAGCCCCTGTGTGGCTCAGCA | + |
Preference number: 3 (lower is better) Translates to: GPIILGPAVPWF*KRLSKPLCGSA Trigger: TGCTGAGCCACACAGGGGCTTGGAGAGCCTCTTGCAGAACCAAGGGACAGCAGGACCTAGGATAATGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CCA 72 bp | TACCCTGGTCCCATTATCCTAGGTCCTGCTGTCCCTTaGTTCTGCAAGAGGCTCTCCAAGCCCCTGTGTGGC | + |
Preference number: 3 (lower is better) Translates to: YPGPIILGPAVP*FCKRLSKPLCG Trigger: GCCACACAGGGGCTTGGAGAGCCTCTTGCAGAACCAAGGGACAGCAGGACCTAGGATAATGGGACCAGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CCA 72 bp | AAAGAGCTGTTTCAGGGAAGAAACAGAGGGCTCTCCTaGAAGGCCCGCCCACTCATCTGCTGCAAGCCAGTG | + |
Preference number: 3 (lower is better) Translates to: KELFQGRNRGLS*KARPLICCKPV Trigger: CACTGGCTTGCAGCAGATGAGTGGGCGGGCCTTCCAGGAGAGCCCTCTGTTTCTTCCCTGAAACAGCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CCA 72 bp | AGACCCAAAGGCACGGGGAACCCTCTCCTCCACACCTaGGCTCAGAGCAACAACATCCTTAAAGCAGAAGCA | + |
Preference number: 3 (lower is better) Translates to: RPKGTGNPLLHT*AQSNNILKAEA Trigger: TGCTTCTGCTTTAAGGATGTTGTTGCTCTGAGCCCAGGTGTGGAGGAGAGGGTTCCCCGTGCCTTTGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR TCA 72 bp | TGTGATATAAGGCAGGGAGAGTCTCCAAGCCAGAGCTaGCAGGAAGAGTCCCCAGGAAAGCACAGTCCCTCT | + |
Preference number: 3 (lower is better) Translates to: CDIRQGESPSQS*QEESPGKHSPS Trigger: AGAGGGACTGTGCTTTCCTGGGGACTCTTCCTGTCAGCTCTGGCTTGGAGACTCTCCCTGCCTTATATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR TCA 72 bp | AACAGGCCTCACTATGACCAAGGGTGGCCCCAAGAATaGTGGAGGGAATGCCACAAGCACACCAGAAACTCC | + |
Preference number: 3 (lower is better) Translates to: NRPHYDQGWPQE*WRECHKHTRNS Trigger: GGAGTTTCTGGTGTGCTTGTGGCATTCCCTCCATCATTCTTGGGGCCACCCTTGGTCATAGTGAGGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR GCA 72 bp | AGAAGCAAGATACCCTGGTCCCATTATCCTAGGTCCTaGTGTCCCTTGGTTCTGCAAGAGGCTCTCCAAGCC | + |
Preference number: 3 (lower is better) Translates to: RSKIPWSHYPRS*CPLVLQEALQA Trigger: GGCTTGGAGAGCCTCTTGCAGAACCAAGGGACAGCAGGACCTAGGATAATGGGACCAGGGTATCTTGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR TCA 72 bp | TCCTCATTCATGGTTAGGCTGGAACAGGCCTCACTATaGCCAAGGGTGGCCCCAAGAATGATGGAGGGAATG | + |
Preference number: 3 (lower is better) Translates to: SSFMVRLEQASL*PRVAPRMMEGM Trigger: CATTCCCTCCATCATTCTTGGGGCCACCCTTGGTCATAGTGAGGCCTGTTCCAGCCTAACCATGAATGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CCA 72 bp | GCTTGCAAGCTCACATTTCCTCATTCATGGTTAGGCTaGAACAGGCCTCACTATGACCAAGGGTGGCCCCAA | + |
Preference number: 3 (lower is better) Translates to: ACKLTFPHSWLG*NRPHYDQGWPQ Trigger: TTGGGGCCACCCTTGGTCATAGTGAGGCCTGTTCCAGCCTAACCATGAATGAGGAAATGTGAGCTTGCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CCA 72 bp | CCCTTGGTTCTGCAAGAGGCTCTCCAAGCCCCTGTGTaGCTCAGCAGGGCTAAATCCTTTGTTTTAAGTCTT | + |
Preference number: 3 (lower is better) Translates to: PLVLQEALQAPV*LSRAKSFVLSL Trigger: AAGACTTAAAACAAAGGATTTAGCCCTGCTGAGCCACACAGGGGCTTGGAGAGCCTCTTGCAGAACCAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CCA 72 bp | CCTTGCAGAGCTTGCAAGCTCACATTTCCTCATTCATaGTTAGGCTGGAACAGGCCTCACTATGACCAAGGG | + |
Preference number: 3 (lower is better) Translates to: PCRACKLTFPHS*LGWNRPHYDQG Trigger: CCCTTGGTCATAGTGAGGCCTGTTCCAGCCTAACCATGAATGAGGAAATGTGAGCTTGCAAGCTCTGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR TCA 72 bp | AGCACTGACATGAGCAGGACTTGTAGGTTTACACTGTaGTATAAGGCAGGGAGAGTCTCCAAGCCAGAGCTG | + |
Preference number: 3 (lower is better) Translates to: STDMSRTCRFTL*YKAGRVSKPEL Trigger: CAGCTCTGGCTTGGAGACTCTCCCTGCCTTATATCACAGTGTAAACCTACAAGTCCTGCTCATGTCAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR TCA 72 bp | TTTACCAAGTTTGAATGTCACAAGAGCTTAACAAGGTaGCTCCTACAGAGGTGCAGAGTGATGTGGAGCAGG | + |
Preference number: 3 (lower is better) Translates to: FTKFECHKSLTR*LLQRCRVMWSR Trigger: CCTGCTCCACATCACTCTGCACCTCTGTAGGAGTCACCTTGTTAAGCTCTTGTGACATTCAAACTTGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | AGGGAGAGTCTCCAAGCCAGAGCTGACAGGAAGAGTCCCCAGGAAAGCACAGTCCGCGGGTCCTGCGCCTaGGCTCCCCCAGTTCCCTCG | + |
Preference number: 4 (lower is better) Translates to: RESLQARADRKSPQESTVRGSCA*APPVPS Trigger: CGAGGGAACTGGGGGAGCGCAGGCGCAGGACCCGCG...GACTGTGCTTTCCTGGGGACTCTTCCTGTCAGCTCTGGCTTGGAGACTCTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | GCACAGTCCCTCTGGGGGAGTGAGAACAATGGGTTCCAGAAAAGGAGTAGACCCCCTTCCCCGAGGCCCTaGCCTCTACGCCCGCCCCCA | + |
Preference number: 4 (lower is better) Translates to: AQSLWGSENNGFQKRSRPPSPRP*PLRPPP Trigger: TGGGGGCGGGCGTAGAGGCCAGGGCCTCGGGGAAGG...GGGTCTACTCCTTTTCTGGAACCCATTGTTCTCACTCCCCCAGAGGGACTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | GCTGTTTCAGGGAAGAAACAGAGGGCTCTCCTGGAAGGCCCGCCCACTCATCTGGGGGCTTCTCTTGGATaGCCCCCTCGCAGGGTCCCT | + |
Preference number: 4 (lower is better) Translates to: AVSGKKQRALLEGPPTHLGASLG*PPRRVP Trigger: AGGGACCCTGCGAGGGGGCCATCCAAGAGAAGCCCC...CAGATGAGTGGGCGGGCCTTCCAGGAGAGCCCTCTGTTTCTTCCCTGAAACAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | AAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCTCCACACCTGGGCTCAGACAGGTCCGCAGCTCCTaGCTCTCCTGGTCCCTCGAT | + |
Preference number: 4 (lower is better) Translates to: KGVDPKARGTLSSTPGLRQVRSS*LSWSLD Trigger: ATCGAGGGACCAGGAGAGCCAGGAGCTGCGGACCTG...TCTGAGCCCAGGTGTGGAGGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | GCTGTTTCAGGGAAGAAACAGAGGGCTCTCCTGGAAGGCCCGCCCACTCATCTGATCCCCCTCCTCCAATaGTGGGCCATTCTCCCTGCG | + |
Preference number: 4 (lower is better) Translates to: AVSGKKQRALLEGPPTHLIPLLQ*WAILPA Trigger: CGCAGGGAGAATGGCCCAGCATTGGAGGAGGGGGAT...CAGATGAGTGGGCGGGCCTTCCAGGAGAGCCCTCTGTTTCTTCCCTGAAACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | GGTGGCCCCAAGAATGATGGAGGGAATGCCACAAGCACACCAGAAACTCCTCAAGTCGCACCTTCGGGTTaGCCCTGGGAACCTGGAGCG | + |
Preference number: 4 (lower is better) Translates to: GGPKNDGGNATSTPETPQVAPSG*PWEPGA Trigger: CGCTCCAGGTTCCCAGGGGCAACCCGAAGGTGCGAC...TTGAGGAGTTTCTGGTGTGCTTGTGGCATTCCCTCCATCATTCTTGGGGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | GCACAGTCCCTCTGGGGGAGTGAGAACAATGGGTTCCAGAAAAGGAGTAGACCCGTCCCTAGGTGCCTCTaGAGCTTCCTCGCTCGCTTC | + |
Preference number: 4 (lower is better) Translates to: AQSLWGSENNGFQKRSRPVPRCL*SFLARF Trigger: GAAGCGAGCGAGGAAGCTGCAGAGGCACCTAGGGAC...GGGTCTACTCCTTTTCTGGAACCCATTGTTCTCACTCCCCCAGAGGGACTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | GGTGGCCCCAAGAATGATGGAGGGAATGCCACAAGCACACCAGAAACTCCTCAACCAGTTCCCTCGTCCTaGCCACAGCCTCCTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: GGPKNDGGNATSTPETPQPVPSS*PQPPSS Trigger: GGAGGAAGGAGGCTGTGGGCAGGACGAGGGAACTGG...TTGAGGAGTTTCTGGTGTGCTTGTGGCATTCCCTCCATCATTCTTGGGGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | AAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCTCCACACCTGGGCTCAGATCTCCTCCTGGAGCTTaGCCTGGTCCCCATTCTCAT | + |
Preference number: 4 (lower is better) Translates to: KGVDPKARGTLSSTPGLRSPPGA*PGPHSH Trigger: ATGAGAATGGGGACCAGGGCAAGCTCCAGGAGGAGA...TCTGAGCCCAGGTGTGGAGGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | TACCCTGGTCCCATTATCCTAGGTCCTGCTGTCCCTTGGTTCTGCAAGAGGCTCAAGAGGGTGATGTCGTaGTCCTGTCCCGGATCCCCC | + |
Preference number: 4 (lower is better) Translates to: YPGPIILGPAVPWFCKRLKRVMS*SCPGSP Trigger: GGGGGATCCGGGACAGGAGCACGACATCACCCTCTT...GAGCCTCTTGCAGAACCAAGGGACAGCAGGACCTAGGATAATGGGACCAGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | AGGAAAGCACAGTCCCTCTGGGGGAGTGAGAACAATGGGTTCCAGAAAAGGAGTTCCCCGGTCTCCTCCTaGAGCTTGCCCTGGTCCCCA | + |
Preference number: 4 (lower is better) Translates to: RKAQSLWGSENNGFQKRSSPVSS*SLPWSP Trigger: TGGGGACCAGGGCAAGCTCCAGGAGGAGACCGGGGA...ACTCCTTTTCTGGAACCCATTGTTCTCACTCCCCCAGAGGGACTGTGCTTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | AAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCTCCACACCTGGGCTCAGACCTCCTCGTGTTCGGTaGATTTGGCCTCCTCTCCAT | + |
Preference number: 4 (lower is better) Translates to: KGVDPKARGTLSSTPGLRPPRVR*IWPPLH Trigger: ATGGAGAGGAGGCCAAATCCACCGAACACGAGGAGG...TCTGAGCCCAGGTGTGGAGGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | GGTGGCCCCAAGAATGATGGAGGGAATGCCACAAGCACACCAGAAACTCCTCAACCTGGACTTCTGGGTTaGTCTGCAACCCTAGCGCGC | + |
Preference number: 4 (lower is better) Translates to: GGPKNDGGNATSTPETPQPGLLG*SATLAR Trigger: GCGCGCTAGGGTTGCAGATCAACCCAGAAGTCCAGG...TTGAGGAGTTTCTGGTGTGCTTGTGGCATTCCCTCCATCATTCTTGGGGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CAA 72 bp | ATACCCTGGTCCCATTATCCTAGGTCCTGCTGTCCCTaGGTTCTGCAAGAGGCTCTCCAAGCCCCTGTGTGG | + |
Preference number: 4 (lower is better) Translates to: IPWSHYPRSCCP*VLQEALQAPVW Trigger: CCACACAGGGGCTTGGAGAGCCTCTTGCAGAACCAAGGGACAGCAGGACCTAGGATAATGGGACCAGGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | AAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCTCCACACCTGGGCTCAGACACCATCAAAAGTCATaGAAGGAGGGTTCGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: KGVDPKARGTLSSTPGLRHHQKS*KEGSSQ Trigger: CTGGGACGAACCCTCCTTTCATGACTTTTGATGGTG...TCTGAGCCCAGGTGTGGAGGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | GGTGGCCCCAAGAATGATGGAGGGAATGCCACAAGCACACCAGAAACTCCTCAAGGCTCCTCAGCTAAGTaGTTGCTGAGCTCTGCCTGG | + |
Preference number: 4 (lower is better) Translates to: GGPKNDGGNATSTPETPQGSSAK*LLSSAW Trigger: CCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCC...TTGAGGAGTTTCTGGTGTGCTTGTGGCATTCCCTCCATCATTCTTGGGGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | AGAACAATGGGTTCCAGAAAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCTTGCTGAGCTCTGCCTaGGATTCCTCCTCGTGTTCG | + |
Preference number: 4 (lower is better) Translates to: RTMGSRKGVDPKARGTLSLLSSA*DSSSCS Trigger: CGAACACGAGGAGGAATCCCAGGCAGAGCTCAGCAA...GGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTTTCTGGAACCCATTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | GACTATTGGACTGAAGCCACAGCTTCCAAGAAACAAGAAAATGTAGTGGCCACCTCGGGGGCCTCACCCTaGGAGTCTAACCCAGAGCTC | + |
Preference number: 4 (lower is better) Translates to: DYWTEATASKKQENVVATSGASP*ESNPEL Trigger: GAGCTCTGGGTTAGACTCTCAGGGTGAGGCCCCCGA...GGTGGCCACTACATTTTCTTGTTTCTTGGAAGCTGTGGCTTCAGTCCAATAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | AGAACAATGGGTTCCAGAAAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCTGGTCCCCATTCTCATaGGCATCTACTCTCGCATCC | + |
Preference number: 4 (lower is better) Translates to: RTMGSRKGVDPKARGTLSWSPFS*ASTLAS Trigger: GGATGCGAGAGTAGATGCTCATGAGAATGGGGACCA...GGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTTTCTGGAACCCATTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | GCTGTTTCAGGGAAGAAACAGAGGGCTCTCCTGGAAGGCCCGCCCACTCATCTGCATAAAGAGACGCTGTaGAAATGGGCAGTTTCCGAT | + |
Preference number: 4 (lower is better) Translates to: AVSGKKQRALLEGPPTHLHKETL*KWAVSD Trigger: ATCGGAAACTGCCCATTTTCACAGCGTCTCTTTATG...CAGATGAGTGGGCGGGCCTTCCAGGAGAGCCCTCTGTTTCTTCCCTGAAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | AGGGAGAGTCTCCAAGCCAGAGCTGACAGGAAGAGTCCCCAGGAAAGCACAGTCTCCTTTGTGAAACAGTaGCATCCTCTGAACTGTCGG | + |
Preference number: 4 (lower is better) Translates to: RESLQARADRKSPQESTVSFVKQ*HPLNCR Trigger: CCGACAGTTCAGAGGATGTCACTGTTTCACAAAGGA...GACTGTGCTTTCCTGGGGACTCTTCCTGTCAGCTCTGGCTTGGAGACTCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | AGGAAAGCACAGTCCCTCTGGGGGAGTGAGAACAATGGGTTCCAGAAAAGGAGTTCCCCTGCAAGTCCCTaGACTTCTGGGTTGATCTGC | + |
Preference number: 4 (lower is better) Translates to: RKAQSLWGSENNGFQKRSSPASP*TSGLIC Trigger: GCAGATCAACCCAGAAGTCCAGGGACTTGCAGGGGA...ACTCCTTTTCTGGAACCCATTGTTCTCACTCCCCCAGAGGGACTGTGCTTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | TGGACTGAAGCCACAGCTTCCAAGAAACAAGAAAATGTAGTGGCCACCATATTGCAGCTAAGTGGTTGCTaGGCTCTGCCTGGGATTCCT | + |
Preference number: 4 (lower is better) Translates to: WTEATASKKQENVVATILQLSGC*ALPGIP Trigger: AGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTG...CAATATGGTGGCCACTACATTTTCTTGTTTCTTGGAAGCTGTGGCTTCAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | AAACTCCCAACCATCAACTCATTTACCAAGTTTGAATGTCACAAGAGCTTAACACCAGAGCTCATCCCCTaGACCTGCTGGGCGCTTGGC | + |
Preference number: 4 (lower is better) Translates to: KLPTINSFTKFECHKSLTPELIP*TCWALG Trigger: GCCAAGCGCCCAGCAGGTGCAGGGGATGAGCTCTGG...TGTTAAGCTCTTGTGACATTCAAACTTGGTAAATGAGTTGATGGTTGGGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | TGGACTGAAGCCACAGCTTCCAAGAAACAAGAAAATGTAGTGGCCACCATATTGGTCCATGTTGTCCCCTaGAAGTCCCTGGACTTCTGG | + |
Preference number: 4 (lower is better) Translates to: WTEATASKKQENVVATILVHVVP*KSLDFW Trigger: CCAGAAGTCCAGGGACTTGCAGGGGACAACATGGAC...CAATATGGTGGCCACTACATTTTCTTGTTTCTTGGAAGCTGTGGCTTCAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | TTAAAATGCCAAGAACTTAAGTCAAAGCCTGTTTGCCCTGAAACAAGCTACAAACCCAAGTGGCCCTCCTaGGGGTGCCTCTGTGTCCAT | + |
Preference number: 4 (lower is better) Translates to: LKCQELKSKPVCPETSYKPKWPS*GCLCVH Trigger: ATGGACACAGAGGCACCCGCAGGAGGGCCACTTGGG...TTTGTAGCTTGTTTCAGGGCAAACAGGCTTTGACTTAAGTTCTTGGCATTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | ACCAGAAACTCCTCAACTTCTCAGGAAAGGACCATTTTCCAGAAAAGCTTAAGAGTGGTTGCTGAGCTCTaGCTGGGATTCCTCCTCGTG | + |
Preference number: 4 (lower is better) Translates to: TRNSSTSQERTIFQKSLRVVAEL*LGFLLV Trigger: CACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCAC...TCTTAAGCTTTTCTGGAAAATGGTCCTTTCCTGAGAAGTTGAGGAGTTTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | ACCAGAAACTCCTCAACTTCTCAGGAAAGGACCATTTTCCAGAAAAGCTTAAGAAACTCTTCTCCACCCTaGACGCTGGGCTCCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: TRNSSTSQERTIFQKSLRNSSPP*TLGSSA Trigger: AGCTGAGGAGCCCAGCGTCCAGGGTGGAGAAGAGTT...TCTTAAGCTTTTCTGGAAAATGGTCCTTTCCTGAGAAGTTGAGGAGTTTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | AAACTCCCAACCATCAACTCATTTACCAAGTTTGAATGTCACAAGAGCTTAACACCTCCCTGCGCTTCCTaGCCAGATTCTGCCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: KLPTINSFTKFECHKSLTPPCAS*PDSASS Trigger: GGAAGAGGCAGAATCTGGTCAGGAAGCGCAGGGAGG...TGTTAAGCTCTTGTGACATTCAAACTTGGTAAATGAGTTGATGGTTGGGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | ACAAGAAAATGTAGTGGCCACCATATTGGACTTTGTTTCCTTTCGAGATATTTTCTCCACCCTGGACGCTaGGCTCCTCAGCTAAGTGGT | + |
Preference number: 4 (lower is better) Translates to: TRKCSGHHIGLCFLSRYFLHPGR*APQLSG Trigger: ACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTGGAG...AAAATATCTCGAAAGGAAACAAAGTCCAATATGGTGGCCACTACATTTTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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3UTR CAA 72 bp | GTATGTGCACGCATGAGCACAGGCATACATGAAAGATaGACCGATTCTGGAAACATTCATCAAATTGTCATC | + |
Preference number: 4 (lower is better) Translates to: VCARMSTGIHER*TDSGNIHQIVI Trigger: GATGACAATTTGATGAATGTTTCCAGAATCGGTCAATCTTTCATGTATGCCTGTGCTCATGCGTGCACATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | TGGACTGAAGCCACAGCTTCCAAGAAACAAGAAAATGTAGTGGCCACCATATTGTATTCACATCTGTCTTaGCTTCACCATCAAAAGTCA | + |
Preference number: 4 (lower is better) Translates to: WTEATASKKQENVVATILYSHLS*LHHQKS Trigger: TGACTTTTGATGGTGAAGTCAAGACAGATGTGAATA...CAATATGGTGGCCACTACATTTTCTTGTTTCTTGGAAGCTGTGGCTTCAGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR TCA 90 bp | ACAAGAAAATGTAGTGGCCACCATATTGGACTTTGTTTCCTTTCGAGATATTTTAACAGTGACATCCTCTaGACTGTCGGCATCGATTTC | + |
Preference number: 4 (lower is better) Translates to: TRKCSGHHIGLCFLSRYFNSDIL*TVGIDF Trigger: GAAATCGATGCCGACAGTTCAGAGGATGTCACTGTT...AAAATATCTCGAAAGGAAACAAAGTCCAATATGGTGGCCACTACATTTTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR GCA 90 bp | ACAAGAAAATGTAGTGGCCACCATATTGGACTTTGTTTCCTTTCGAGATATTTTCTTCATCCTTTTCGCTaGATCGGAATATGCGTGTTC | + |
Preference number: 4 (lower is better) Translates to: TRKCSGHHIGLCFLSRYFLHPFR*IGICVF Trigger: GAACACGCATATTCCGATGCAGCGAAAAGGATGAAG...AAAATATCTCGAAAGGAAACAAAGTCCAATATGGTGGCCACTACATTTTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CCA 90 bp | ACAAGAAAATGTAGTGGCCACCATATTGGACTTTGTTTCCTTTCGAGATATTTTACAATCTTAATGATATaGAGCTTGGGTAAGAGGTTA | + |
Preference number: 4 (lower is better) Translates to: TRKCSGHHIGLCFLSRYFTILMI*SLGKRL Trigger: TAACCTCTTACCCAAGCTCCATATCATTAAGATTGT...AAAATATCTCGAAAGGAAACAAAGTCCAATATGGTGGCCACTACATTTTCTTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS GCA 90 bp | GCGCCCGGCGTCTCGGCCTCAGGGCCGGTGCGCGGGTCCTGCGCCTaGGCTCCCCCAGTTCCCTCGTCCTGCCCACAGCCTCCTTCCTCC | + |
Preference number: 5 (lower is better) Translates to: APGVSASGPVRGSCA*APPVPSSCPQPPSS Trigger: GGAGGAAGGAGGCTGTGGGCAGGACGAGGGAACTGGGGGAGCGCAGGCGCAGGACCCGCGCACCGGCCCTGAGGCCGAGACGCCGGGCGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 90 bp | GCGCTTCCTGACCAGATTCTGCCTCTTCCCCTGCCTCTGAGGCCGTaGGGTCCTCGGGCTCCCGGCGAGAGTCCCCAGGGACCTCGGGGG | + |
Preference number: 5 (lower is better) Translates to: ALPDQILPLPLPLRP*GPRAPGESPQGPRG Trigger: CCCCCGAGGTCCCTGGGGACTCTCGCCGGGAGCCCGAGGACCCCACGGCCTCAGAGGCAGGGGAAGAGGCAGAATCTGGTCAGGAAGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS GCA 90 bp | GCAGCTCCTGGCTCTCCTGGTCCCTCGATTGTCGCACCTTCGGGTTaGCCCTGGGAACCTGGAGCGACCTCCTTGGGCTCCGTGGCCTCA | + |
Preference number: 5 (lower is better) Translates to: AAPGSPGPSIVAPSG*PWEPGATSLGSVAS Trigger: TGAGGCCACGGAGCCCAAGGAGGTCGCTCCAGGTTCCCAGGGGCAACCCGAAGGTGCGACAATCGAGGGACCAGGAGAGCCAGGAGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 90 bp | GAGGGTGATGTCGTGCTCCTGTCCCGGATCCCCCTCCTCCAATGCTaGGCCATTCTCCCTGCGGCCGTTCACTCGCCCCAACTCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: EGDVVLLSRIPLLQC*AILPAAVHSPQLFS Trigger: GGAGAAGAGTTGGGGCGAGTGAACGGCCGCAGGGAGAATGGCCCAGCATTGGAGGAGGGGGATCCGGGACAGGAGCACGACATCACCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS GCA 90 bp | GAAGAGGGTGATGTCGTGCTCCTGTCCCGGATCCCCCTCCTCCAATaGTGGGCCATTCTCCCTGCGGCCGTTCACTCGCCCCAACTCTTC | + |
Preference number: 5 (lower is better) Translates to: EEGDVVLLSRIPLLQ*WAILPAAVHSPQLF Trigger: GAAGAGTTGGGGCGAGTGAACGGCCGCAGGGAGAATGGCCCAGCATTGGAGGAGGGGGATCCGGGACAGGAGCACGACATCACCCTCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 90 bp | CCATTCTCCCTGCGGCCGTTCACTCGCCCCAACTCTTCTCCACCCTaGACGCTGGGCTCCTCAGCTAAGTGGTTGCTGAGCTCTGCCTGG | + |
Preference number: 5 (lower is better) Translates to: PFSLRPFTRPNSSPP*TLGSSAKWLLSSAW Trigger: CCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTGGAGAAGAGTTGGGGCGAGTGAACGGCCGCAGGGAGAATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS TCA 90 bp | CCTCTGTGTCCATGTTGTCCCCTGCAAGTCCCTGGACTTCTGGGTTaGTCTGCAACCCTAGCGCGCCGCCTCCCTGCGCTTCCTGACCAG | + |
Preference number: 5 (lower is better) Translates to: PLCPCCPLQVPGLLG*SATLARRLPALPDQ Trigger: CTGGTCAGGAAGCGCAGGGAGGCGGCGCGCTAGGGTTGCAGATCAACCCAGAAGTCCAGGGACTTGCAGGGGACAACATGGACACAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS GCA 90 bp | CGGGTTCTGGCCTCGCTTCTTCCTCCCCGGTCTCCTCCTGGAGCTTaGCCTGGTCCCCATTCTCATGAGCATCTACTCTCGCATCCTCGG | + |
Preference number: 5 (lower is better) Translates to: RVLASLLPPRSPPGA*PGPHSHEHLLSHPR Trigger: CCGAGGATGCGAGAGTAGATGCTCATGAGAATGGGGACCAGGGCAAGCTCCAGGAGGAGACCGGGGAGGAAGAAGCGAGGCCAGAACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 90 bp | CGCCCCAACTCTTCTCCACCCTGGACGCTGGGCTCCTCAGCTAAGTaGTTGCTGAGCTCTGCCTGGGATTCCTCCTCGTGTTCGGTGGAT | + |
Preference number: 5 (lower is better) Translates to: RPNSSPPWTLGSSAK*LLSSAWDSSSCSVD Trigger: ATCCACCGAACACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTGGAGAAGAGTTGGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CAA 90 bp | AGAACAATGGGTTCCAGAAAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCCCTGGAGCGACCTCCTaGGGCTCCGTGGCCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: RTMGSRKGVDPKARGTLSPGATS*GSVASA Trigger: GGCTGAGGCCACGGAGCCCAAGGAGGTCGCTCCAGG...GGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTTTCTGGAACCCATTGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 90 bp | CCCTGGACGCTGGGCTCCTCAGCTAAGTGGTTGCTGAGCTCTGCCTaGGATTCCTCCTCGTGTTCGGTGGATTTGGCCTCCTCTCCATCA | + |
Preference number: 5 (lower is better) Translates to: PWTLGSSAKWLLSSA*DSSSCSVDLASSPS Trigger: TGATGGAGAGGAGGCCAAATCCACCGAACACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS TCA 90 bp | ACTCTTCTCCACCCTGGACGCTGGGCTCCTCAGCTAAGTGGTTGCTaGGCTCTGCCTGGGATTCCTCCTCGTGTTCGGTGGATTTGGCCT | + |
Preference number: 5 (lower is better) Translates to: TLLHPGRWAPQLSGC*ALPGIPPRVRWIWP Trigger: AGGCCAAATCCACCGAACACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTGGAGAAGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 90 bp | TCCGATGCTCTCGCCGTCATAACCAGCCTCGGATACTCGGGTACCTaGGATGGTGTCAGAGGACCTCTGTGTCCGGGAGATGAAGAGCTG | + |
Preference number: 5 (lower is better) Translates to: SDALAVITSLGYSGT*DGVRGPLCPGDEEL Trigger: CAGCTCTTCATCTCCCGGACACAGAGGTCCTCTGACACCATCCCAGGTACCCGAGTATCCGAGGCTGGTTATGACGGCGAGAGCATCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162181.8 |
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CDS-3UTR CAA 90 bp | GCACAGTCCCTCTGGGGGAGTGAGAACAATGGGTTCCAGAAAAGGAGTAGACCCGTCTCCTCCTGGAGCTaGCCCTGGTCCCCATTCTCA | + |
Preference number: 5 (lower is better) Translates to: AQSLWGSENNGFQKRSRPVSSWS*PWSPFS Trigger: TGAGAATGGGGACCAGGGCAAGCTCCAGGAGGAGAC...GGGTCTACTCCTTTTCTGGAACCCATTGTTCTCACTCCCCCAGAGGGACTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CAA 90 bp | ACCAGAAACTCCTCAACTTCTCAGGAAAGGACCATTTTCCAGAAAAGCTTAAGAGCACCTGCTGGGCGCTaGGCGCCTCCTCCGCTCCCT | + |
Preference number: 5 (lower is better) Translates to: TRNSSTSQERTIFQKSLRAPAGR*APPPLP Trigger: AGGGAGCGGAGGAGGCGCCAAGCGCCCAGCAGGTGC...TCTTAAGCTTTTCTGGAAAATGGTCCTTTCCTGAGAAGTTGAGGAGTTTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CAA 90 bp | AGAACAATGGGTTCCAGAAAAGGAGTAGACCCAAAGGCACGGGGAACCCTCTCCTCGTGTTCGGTGGATTaGGCCTCCTCTCCATCAAGG | + |
Preference number: 5 (lower is better) Translates to: RTMGSRKGVDPKARGTLSSCSVD*ASSPSR Trigger: CCTTGATGGAGAGGAGGCCAAATCCACCGAACACGA...GGAGAGGGTTCCCCGTGCCTTTGGGTCTACTCCTTTTCTGGAACCCATTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CAA 90 bp | AGGAAAGCACAGTCCCTCTGGGGGAGTGAGAACAATGGGTTCCAGAAAAGGAGTTCCTCAGCTAAGTGGTaGCTGAGCTCTGCCTGGGAT | + |
Preference number: 5 (lower is better) Translates to: RKAQSLWGSENNGFQKRSSSAKW*LSSAWD Trigger: ATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGA...ACTCCTTTTCTGGAACCCATTGTTCTCACTCCCCCAGAGGGACTGTGCTTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CAA 90 bp | AGGGAGAGTCTCCAAGCCAGAGCTGACAGGAAGAGTCCCCAGGAAAGCACAGTCTCCACCGTTGTCACATaGAATATAACACCCTTTAGC | + |
Preference number: 5 (lower is better) Translates to: RESLQARADRKSPQESTVSTVVT*NITPFS Trigger: GCTAAAGGGTGTTATATTCAATGTGACAACGGTGGA...GACTGTGCTTTCCTGGGGACTCTTCCTGTCAGCTCTGGCTTGGAGACTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS-3UTR CAA 90 bp | GCTGTTTCAGGGAAGAAACAGAGGGCTCTCCTGGAAGGCCCGCCCACTCATCTGTTAATGATATGGAGCTaGGGTAAGAGGTTACAGTCA | + |
Preference number: 5 (lower is better) Translates to: AVSGKKQRALLEGPPTHLLMIWS*GKRLQS Trigger: TGACTGTAACCTCTTACCCAAGCTCCATATCATTAA...CAGATGAGTGGGCGGGCCTTCCAGGAGAGCCCTCTGTTTCTTCCCTGAAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | CGCGCTCCGCAGCCTCCGCTTCACCTGGAGCTCCGCTaGCGCCCGGCGTCTCGGCCTCAGGGCCGGTGCGCG | + |
Preference number: 6 (lower is better) Translates to: RAPQPPLHLELR*RPASRPQGRCA Trigger: CGCGCACCGGCCCTGAGGCCGAGACGCCGGGCGCCAGCGGAGCTCCAGGTGAAGCGGAGGCTGCGGAGCGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS GCA 72 bp | TGCACCTGCTGGGCGCTTGGCGCCTCCTCCGCTCCCTaGGGGATCGCGCCCTCGGGGTCGCGCTCCGCAGCC | + |
Preference number: 6 (lower is better) Translates to: CTCWALGASSAP*GIAPSGSRSAA Trigger: GGCTGCGGAGCGCGACCCCGAGGGCGCGATCCCGCAGGGAGCGGAGGAGGCGCCAAGCGCCCAGCAGGTGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | GCCCTCGGGGTCGCGCTCCGCAGCCTCCGCTTCACCTaGAGCTCCGCTGGCGCCCGGCGTCTCGGCCTCAGG | + |
Preference number: 6 (lower is better) Translates to: ALGVALRSLRFT*SSAGARRLGLR Trigger: CCTGAGGCCGAGACGCCGGGCGCCAGCGGAGCTCCAGGTGAAGCGGAGGCTGCGGAGCGCGACCCCGAGGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CAA 90 bp | CCTGAGAGTCTAACCCAGAGCTCATCCCCTGCACCTGCTGGGCGCTaGGCGCCTCCTCCGCTCCCTGCGGGATCGCGCCCTCGGGGTCGC | + |
Preference number: 6 (lower is better) Translates to: PESLTQSSSPAPAGR*APPPLPAGSRPRGR Trigger: GCGACCCCGAGGGCGCGATCCCGCAGGGAGCGGAGGAGGCGCCAAGCGCCCAGCAGGTGCAGGGGATGAGCTCTGGGTTAGACTCTCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CAA 90 bp | CCCGCCCCTCCAGGTCCGCAGCTCCTGGCTCTCCTGGTCCCTCGATaGTCGCACCTTCGGGTTGCCCCTGGGAACCTGGAGCGACCTCCT | + |
Preference number: 6 (lower is better) Translates to: PAPPGPQLLALLVPR*SHLRVAPGNLERPP Trigger: AGGAGGTCGCTCCAGGTTCCCAGGGGCAACCCGAAGGTGCGACAATCGAGGGACCAGGAGAGCCAGGAGCTGCGGACCTGGAGGGGCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CAA 90 bp | CGCAGCTCCTGGCTCTCCTGGTCCCTCGATTGTCGCACCTTCGGGTaGCCCCTGGGAACCTGGAGCGACCTCCTTGGGCTCCGTGGCCTC | + |
Preference number: 6 (lower is better) Translates to: RSSWLSWSLDCRTFG*PLGTWSDLLGLRGL Trigger: GAGGCCACGGAGCCCAAGGAGGTCGCTCCAGGTTCCCAGGGGCAACCCGAAGGTGCGACAATCGAGGGACCAGGAGAGCCAGGAGCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | CCTGGTCCCTCGATTGTCGCACCTTCGGGTTGCCCCTaGGAACCTGGAGCGACCTCCTTGGGCTCCGTGGCC | + |
Preference number: 6 (lower is better) Translates to: PGPSIVAPSGCP*EPGATSLGSVA Trigger: GGCCACGGAGCCCAAGGAGGTCGCTCCAGGTTCCCAGGGGCAACCCGAAGGTGCGACAATCGAGGGACCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | TTCCCGCCCCTCCAGGTCCGCAGCTCCTGGCTCTCCTaGTCCCTCGATTGTCGCACCTTCGGGTTGCCCCTG | + |
Preference number: 6 (lower is better) Translates to: FPPLQVRSSWLS*SLDCRTFGLPL Trigger: CAGGGGCAACCCGAAGGTGCGACAATCGAGGGACCAGGAGAGCCAGGAGCTGCGGACCTGGAGGGGCGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | GATGGCCCCCTCGCAGGGTCCCTTCAACTCGGGTTCTaGCCTCGCTTCTTCCTCCCCGGTCTCCTCCTGGAG | + |
Preference number: 6 (lower is better) Translates to: DGPLAGSLQLGF*PRFFLPGLLLE Trigger: CTCCAGGAGGAGACCGGGGAGGAAGAAGCGAGGCCAGAACCCGAGTTGAAGGGACCCTGCGAGGGGGCCATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CAA 72 bp | CCAGGTCCGCAGCTCCTGGCTCTCCTGGTCCCTCGATaGTCGCACCTTCGGGTTGCCCCTGGGAACCTGGAG | + |
Preference number: 6 (lower is better) Translates to: PGPQLLALLVPR*SHLRVAPGNLE Trigger: CTCCAGGTTCCCAGGGGCAACCCGAAGGTGCGACAATCGAGGGACCAGGAGAGCCAGGAGCTGCGGACCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS TCA 72 bp | ATCTGCAACCCTAGCGCGCCGCCTCCCTGCGCTTCCTaGCCAGATTCTGCCTCTTCCCCTGCCTCTGAGGCC | + |
Preference number: 6 (lower is better) Translates to: ICNPSAPPPCAS*PDSASSPASEA Trigger: GGCCTCAGAGGCAGGGGAAGAGGCAGAATCTGGTCAGGAAGCGCAGGGAGGCGGCGCGCTAGGGTTGCAGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS GCA 72 bp | CCGGATCCCCCTCCTCCAATGCTGGGCCATTCTCCCTaGGGCCGTTCACTCGCCCCAACTCTTCTCCACCCT | + |
Preference number: 6 (lower is better) Translates to: PDPPPPMLGHSP*GRSLAPTLLHP Trigger: AGGGTGGAGAAGAGTTGGGGCGAGTGAACGGCCGCAGGGAGAATGGCCCAGCATTGGAGGAGGGGGATCCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | CTGCGGCCGTTCACTCGCCCCAACTCTTCTCCACCCTaGACGCTGGGCTCCTCAGCTAAGTGGTTGCTGAGC | + |
Preference number: 6 (lower is better) Translates to: LRPFTRPNSSPP*TLGSSAKWLLS Trigger: GCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTGGAGAAGAGTTGGGGCGAGTGAACGGCCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS TCA 72 bp | CACCCTGGACGCTGGGCTCCTCAGCTAAGTGGTTGCTaGGCTCTGCCTGGGATTCCTCCTCGTGTTCGGTGG | + |
Preference number: 6 (lower is better) Translates to: HPGRWAPQLSGC*ALPGIPPRVRW Trigger: CCACCGAACACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CAA 72 bp | TCCATGTTGTCCCCTGCAAGTCCCTGGACTTCTGGGTaGATCTGCAACCCTAGCGCGCCGCCTCCCTGCGCT | + |
Preference number: 6 (lower is better) Translates to: SMLSPASPWTSG*ICNPSAPPPCA Trigger: AGCGCAGGGAGGCGGCGCGCTAGGGTTGCAGATCAACCCAGAAGTCCAGGGACTTGCAGGGGACAACATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS GCA 72 bp | CCCTCCTGCGGGTGCCTCTGTGTCCATGTTGTCCCCTaGAAGTCCCTGGACTTCTGGGTTGATCTGCAACCC | + |
Preference number: 6 (lower is better) Translates to: PSCGCLCVHVVP*KSLDFWVDLQP Trigger: GGGTTGCAGATCAACCCAGAAGTCCAGGGACTTGCAGGGGACAACATGGACACAGAGGCACCCGCAGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | CCGCCAGCTCCCCGGACTCGTTCCCTCCGATCTCTGTaGTTACAATCTCAATCGCCTCATCCTGGGGCTGAG | + |
Preference number: 6 (lower is better) Translates to: PPAPRTRSLRSL*LQSQSPHPGAE Trigger: CTCAGCCCCAGGATGAGGCGATTGAGATTGTAACCACAGAGATCGGAGGGAACGAGTCCGGGGAGCTGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CAA 72 bp | CCAAGTGGCCCTCCTGCGGGTGCCTCTGTGTCCATGTaGTCCCCTGCAAGTCCCTGGACTTCTGGGTTGATC | + |
Preference number: 6 (lower is better) Translates to: PSGPPAGASVSM*SPASPWTSGLI Trigger: GATCAACCCAGAAGTCCAGGGACTTGCAGGGGACAACATGGACACAGAGGCACCCGCAGGAGGGCCACTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CAA 72 bp | TCTCCACCCTGGACGCTGGGCTCCTCAGCTAAGTGGTaGCTGAGCTCTGCCTGGGATTCCTCCTCGTGTTCG | + |
Preference number: 6 (lower is better) Translates to: SPPWTLGSSAKW*LSSAWDSSSCS Trigger: CGAACACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | CTGGGCTCCTCAGCTAAGTGGTTGCTGAGCTCTGCCTaGGATTCCTCCTCGTGTTCGGTGGATTTGGCCTCC | + |
Preference number: 6 (lower is better) Translates to: LGSSAKWLLSSA*DSSSCSVDLAS Trigger: GGAGGCCAAATCCACCGAACACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | TCTTCTCCACCCTGGACGCTGGGCTCCTCAGCTAAGTaGTTGCTGAGCTCTGCCTGGGATTCCTCCTCGTGT | + |
Preference number: 6 (lower is better) Translates to: SSPPWTLGSSAK*LLSSAWDSSSC Trigger: ACACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTGGAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS CCA 72 bp | CTCGCCGTCATAACCAGCCTCGGATACTCGGGTACCTaGGATGGTGTCAGAGGACCTCTGTGTCCGGGAGAT | + |
Preference number: 6 (lower is better) Translates to: LAVITSLGYSGT*DGVRGPLCPGD Trigger: ATCTCCCGGACACAGAGGTCCTCTGACACCATCCCAGGTACCCGAGTATCCGAGGCTGGTTATGACGGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162181.8 |
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CDS CAA 90 bp | CCCAACTCTTCTCCACCCTGGACGCTGGGCTCCTCAGCTAAGTGGTaGCTGAGCTCTGCCTGGGATTCCTCCTCGTGTTCGGTGGATTTG | + |
Preference number: 6 (lower is better) Translates to: PNSSPPWTLGSSAKW*LSSAWDSSSCSVDL Trigger: CAAATCCACCGAACACGAGGAGGAATCCCAGGCAGAGCTCAGCAACCACTTAGCTGAGGAGCCCAGCGTCCAGGGTGGAGAAGAGTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |
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CDS TCA 72 bp | GTCTCCTCCTGGAGCTTGCCCTGGTCCCCATTCTCATaGGCATCTACTCTCGCATCCTCGGAAGCTGCTTCC | + |
Preference number: 6 (lower is better) Translates to: VSSWSLPWSPFS*ASTLASSEAAS Trigger: GGAAGCAGCTTCCGAGGATGCGAGAGTAGATGCTCATGAGAATGGGGACCAGGGCAAGCTCCAGGAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023670.4 |