Pregenerated sensors for CLIC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023959Ensembl transcript IDs: ENSMUST00000024755.7, ENSMUST00000239215.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATTTCTATGGAAAGGATCTGTGCTGCTCCACCCTCCCGAGCAATaGGCCAAGACCAGGGCCTTACCGGCCCTCAGGAGCCTCGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: VFLWKGSVLLHPPEQ*AKTRALPALRSLAS Trigger: GGAGGCGAGGCTCCTGAGGGCCGGTAAGGCCCTGGTCTTGGCTCATTGCTCGGGAGGGTGGAGCAGCACAGATCCTTTCCATAGAAATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR CCA 90 bp | CTGCAGGTAGAGTCCACACTACAAACCCTTCCACATGGTCTGAGCTaGGACTTGGAACCTCAACACAGGGTGACTGCAGATGGTAAACCA | + |
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Preference number: 1 (lower is better) Translates to: LQVESTLQTLPHGLS*DLEPQHRVTADGKP Trigger: TGGTTTACCATCTGCAGTCACCCTGTGTTGAGGTTCCAAGTCCCAGCTCAGACCATGTGGAAGGGTTTGTAGTGTGGACTCTACCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR CCA 90 bp | ACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTaGGCCTTTTGGCATCAATATTGCTTCCCAGAAGTCTCTCCCTAT | + |
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Preference number: 1 (lower is better) Translates to: TTTLQPVTPVAVDPV*AFWHQYCFPEVSPY Trigger: ATAGGGAGAGACTTCTGGGAAGCAATATTGATGCCAAAAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR CCA 90 bp | ATTAGTATCCTGCCTCATCTTGCAGCTGAGCTAACTCCTAGACCATaGAAGAATGGACAGAAACCCCAGAAGTACCTACCGACCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: ISILPHLAAELTPRP*KNGQKPQKYLPTRH Trigger: GTGTCTGGTCGGTAGGTACTTCTGGGGTTTCTGTCCATTCTTCCATGGTCTAGGAGTTAGCTCAGCTGCAAGATGAGGCAGGATACTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR TCA 90 bp | TGGTCACTCTTTGCTTTGGAGATCCCTAGAGGCAGGAGGGCTCAGTaGCTGCTTGGGTTAAACCATGTTGTATTTCTATGGAAAGGATCT | + |
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Preference number: 1 (lower is better) Translates to: WSLFALEIPRGRRAQ*LLGLNHVVFLWKGS Trigger: AGATCCTTTCCATAGAAATACAACATGGTTTAACCCAAGCAGTCACTGAGCCCTCCTGCCTCTAGGGATCTCCAAAGCAAAGAGTGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR TCA 90 bp | CAAGGCCAAAGACAAGATCACAAATCTTCTCCCAACACCAGAGTCTaGGGCCTCATGAGCACACTTCTTTCCTTCACCCTTTCTAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: QGQRQDHKSSPNTRV*GLMSTLLSFTLSKG Trigger: ACCTTTAGAAAGGGTGAAGGAAAGAAGTGTGCTCATGAGGCCTCAGACTCTGGTGTTGGGAGAAGATTTGTGATCTTGTCTTTGGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR GCA 90 bp | ATGTTTCATTCCATGATGGTTCTAACCTGCTTAGGACTACCTGTCTaGAGAATGTCCACCCCTCTAGTCACTGTTCTTGTTTCACCTCAT | + |
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Preference number: 1 (lower is better) Translates to: MFHSMMVLTCLGLPV*RMSTPLVTVLVSPH Trigger: ATGAGGTGAAACAAGAACAGTGACTAGAGGGGTGGACATTCTGCAGACAGGTAGTCCTAAGCAGGTTAGAACCATCATGGAATGAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR TCA 90 bp | GACAAGATCACAAATCTTCTCCCAACACCAGAGTCTGAGGCCTCATaGGCACACTTCTTTCCTTCACCCTTTCTAAAGGTTCTTTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: DKITNLLPTPESEAS*AHFFPSPFLKVLCN Trigger: ATTACAAAGAACCTTTAGAAAGGGTGAAGGAAAGAAGTGTGCTCATGAGGCCTCAGACTCTGGTGTTGGGAGAAGATTTGTGATCTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR CCA 90 bp | CTTATAATTCAGGCACAAGCTGTTAGTTTGAATGATAAAGAGCAGTaGATACAAAGTCATTGGCTTATTTGTAGAAGGGCCCCAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: LIIQAQAVSLNDKEQ*IQSHWLICRRAPRP Trigger: TGGCCTTGGGGCCCTTCTACAAATAAGCCAATGACTTTGTATCCACTGCTCTTTATCATTCAAACTAACAGCTTGTGCCTGAATTATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR TCA 90 bp | TGTCTTGCTTTGCACTTAACGTTTCATACATACAAGATTGTCATGTaGCAATCCAAGGTGAGAAAAGAATACACAATAGCTCTGTCAACA | + |
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Preference number: 1 (lower is better) Translates to: CLALHLTFHTYKIVM*QSKVRKEYTIALST Trigger: TGTTGACAGAGCTATTGTGTATTCTTTTCTCACCTTGGATTGTCACATGACAATCTTGTATGTATGAAACGTTAAGTGCAAAGCAAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR GCA 90 bp | AAGACATTTTTGGCTGATGTTGGAGTCTGCTCTACAGTTGGTAGGGGTGCCGTAACCGTGTCCTCTGCTTaGCAGGCTCCTGCAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: KTFLADVGVCSTVGRGAVTVSSA*QAPAGQ Trigger: TTGCCCTGCAGGAGCCTGGCAAGCAGAGGACACGGT...TACGGCACCCCTACCAACTGTAGAGCAGACTCCAACATCAGCCAAAAATGTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCTCAGCATGCACGCTAGTCTTCATATCTTTAACACCAGCCCACCTTTGGGACAGGAGGAAAACTTaGGTCAGTGCTGGCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GPSACTLVFISLTPAHLWDRRKT*VSAGQD Trigger: ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTC...CCAAAGGTGGGCTGGTGTTAAAGATATGAAGACTAGCGTGCATGCTGAGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR CAA 90 bp | TCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTTaGGCATCAATATTGCTTCCCAGAAGTCTCTCCCTATCTGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SSASDPCGCRPCLGL*ASILLPRSLSLSGS Trigger: TGACCCAGATAGGGAGAGACTTCTGGGAAGCAATATTGATGCCAAAAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR CAA 90 bp | GACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTaGGGCCTTTTGGCATCAATATTGCTTCCCAGAAGTCTCTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: DDYSSASDPCGCRPC*GLLASILLPRSLSL Trigger: TAGGGAGAGACTTCTGGGAAGCAATATTGATGCCAAAAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGTGGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGTGCTGGCCAGGATACGGTGACAATCCCATaGGAGCTCTGCAAACTGACC | + |
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Preference number: 2 (lower is better) Translates to: PLWQNGDRRKTWVSAGQDTVTIP*ELCKLT Trigger: GGTCAGTTTGCAGAGCTCTCATGGGATTGTCACCGT...ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCGAAGTAGAATTCTTCTaGAGCAGAAATTGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VDDYSSASDPCGCRPCLGEVEFF*SRNWAR Trigger: TCTGGCCCAATTTCTGCTGCAGAAGAATTCTACTTC...GCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCTCAGCATGCACGCTAGTCTTCATATCTTTAACACCAGCCCACCTTTGGCAGCCTAGGTTCTCATaGTCACACCCTGTGAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: GPSACTLVFISLTPAHLWQPRFS*SHPVRV Trigger: AACTCTCACAGGGTGTGACCATGAGAACCTAGGCTG...CCAAAGGTGGGCTGGTGTTAAAGATATGAAGACTAGCGTGCATGCTGAGGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR TCA 90 bp | GGAACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGACGGTGACAATCCCATaGGAGCTCTGCAAACTGACC | + |
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Preference number: 2 (lower is better) Translates to: GTRGERSWHFKLLAHLRKTVTIP*ELCKLT Trigger: GGTCAGTTTGCAGAGCTCTCATGGGATTGTCACCGT...CTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGAGGGGAGAGAGAAGCTaGCATTTCAAGTTGTTAGCG | + |
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Preference number: 2 (lower is better) Translates to: VGGVSIWPTVRNSEHLELRGERS*HFKLLA Trigger: CGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCT...CAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTTGCTTGCCAGGCTCCTaGAGGGCAAGGCAGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: VSAGQDVIILHQKTGVYCCLPGS*RARQKD Trigger: ATCCTTCTGCCTTGCCCTGCAGGAGCCTGGCAAGCA...ACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR CAA 90 bp | CAAGGCATAGATCTCTCCCTGACGATGATGTATCTGTCCATCACCTaGCATTTGCTGAGGAACGAGGGGAGAGAGAAGCTGGCATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: QGIDLSLTMMYLSIT*HLLRNEGREKLAFQ Trigger: TTGAAATGCCAGCTTCTCTCTCCCCTCGTTCCTCAGCAAATGCAAGGTGATGGACAGATACATCATCGTCAGGGAGAGATCTATGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR CAA 90 bp | GTAGAGTCCACACTACAAACCCTTCCACATGGTCTGAGCTGGGACTaGGAACCTCAACACAGGGTGACTGCAGATGGTAAACCATATACA | + |
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Preference number: 2 (lower is better) Translates to: VESTLQTLPHGLSWD*EPQHRVTADGKPYT Trigger: TGTATATGGTTTACCATCTGCAGTCACCCTGTGTTGAGGTTCCAAGTCCCAGCTCAGACCATGTGGAAGGGTTTGTAGTGTGGACTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR TCA 90 bp | GTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGTCTGAGAAAGCATTATaGTATTGGCAGAAGGGAACG | + |
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Preference number: 2 (lower is better) Translates to: VGGVSIWPTVRNSEHLELSEKAL*YWQKGT Trigger: CGTTCCCTTCTGCCAATATCATAATGCTTTCTCAGA...CAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR GCA 90 bp | ATATTGCTTCCCAGAAGTCTCTCCCTATCTGGGTCACCTTGGTTTAGAGTTATATGCTTGCCAGGCTCCTaGAGGGCAAGGCAGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: ILLPRSLSLSGSPWFRVICLPGS*RARQKD Trigger: ATCCTTCTGCCTTGCCCTGCAGGAGCCTGGCAAGCA...TATAACTCTAAACCAAGGTGACCCAGATAGGGAGAGACTTCTGGGAAGCAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGTTTTGTTTCCCCAAGGCAATaGGGAAGAAGAGTCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: GVSPSGPLSEIVSIWNCFVSPRQ*GRRVCR Trigger: TCTACAGACTCTTCTTCCCCATTGCCTTGGGGAAAC...AAAACAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGTGGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGTGCTGGCCAGGATTCTGAGAAAGCATTATaGTATTGGCAGAAGGGAACG | + |
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Preference number: 2 (lower is better) Translates to: PLWQNGDRRKTWVSAGQDSEKAL*YWQKGT Trigger: CGTTCCCTTCTGCCAATATCATAATGCTTTCTCAGA...ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCTGTGCCAGGCATGTTTCATTCCATGATGGTTCTAACCTGCTTAGGACTTCCACTTCCTTCGCTTaGTCAAACCCAAAGCTACCC | + |
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Preference number: 2 (lower is better) Translates to: SLCARHVSFHDGSNLLRTSTSFA*SNPKLP Trigger: GGGTAGCTTTGGGTTTGAGCAAGCGAAGGAAGTGGA...AGTCCTAAGCAGGTTAGAACCATCATGGAATGAAACATGCCTGGCACAGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGTGGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGTGCTGGCCAGGATGAAATAGTGAGCATCTaGAACTGTTTTGCTAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PLWQNGDRRKTWVSAGQDEIVSI*NCFARA Trigger: GGCTCTAGCAAAACAGTTCCAGATGCTCACTATTTC...ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR CAA 90 bp | ATAGATCTCTCCCTGACGATGATGTATCTGTCCATCACCTTGCATTaGCTGAGGAACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: IDLSLTMMYLSITLH*LRNEGREKLAFQVV Trigger: AACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTTCCTCAGCAAATGCAAGGTGATGGACAGATACATCATCGTCAGGGAGAGATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAAGTGACTATGAAGAGCCTGGAAGACATTTTTGGCTGATGTTGGAGTCTCCCAAAGCTACCCACTaGAGAACACAGTCACACACA | + |
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Preference number: 2 (lower is better) Translates to: SASDYEEPGRHFWLMLESPKATH*RTQSHT Trigger: TGTGTGTGACTGTGTTCTTCAGTGGGTAGCTTTGGG...AGACTCCAACATCAGCCAAAAATGTCTTCCAGGCTCTTCATAGTCACTTGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CCA 90 bp | AAGGATCCCGGAGAACAGCATGGTTTTCTTTTAATTAAACGGCCTTCCGGATGGAGGGGAGAGAGAAGCTaGCATTTCAAGTTGTTAGCG | + |
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Preference number: 2 (lower is better) Translates to: KDPGEQHGFLLIKRPSGWRGERS*HFKLLA Trigger: CGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCT...CCATCCGGAAGGCCGTTTAATTAAAAGAAAACCATGCTGTTCTCCGGGATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR CAA 90 bp | AAAATGAACCCAAGCCCAAGGCAGTCCATAATTTCCAAATTCAAGTaGTGGCTTCCCAGTCAGAAAGACCCATGGGCTTTCTTCCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: KMNPSPRQSIISKFK*WLPSQKDPWAFFLR Trigger: CCTTAGGAAGAAAGCCCATGGGTCTTTCTGACTGGGAAGCCACAACTTGAATTTGGAAATTATGGACTGCCTTGGGCTTGGGTTCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCATTTACCGGAATAGCTCTTATCCAGAATTTCTGCAGGTAGAGTCCACACCCTCCTTGGATCAATaGTCACTCTTTGCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TGIYRNSSYPEFLQVESTPSLDQ*SLFALE Trigger: CTCCAAAGCAAAGAGTGACCATTGATCCAAGGAGGG...TGTGGACTCTACCTGCAGAAATTCTGGATAAGAGCTATTCCGGTAAATGCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CCA 90 bp | CATAATTTCCAAATTCAAGTTGTGGCTTCCCAGTCAGAAAGACCCATGGGCTTTGTTTCCCCAAGGCAATaGGGAAGAAGAGTCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: HNFQIQVVASQSERPMGFVSPRQ*GRRVCR Trigger: TCTACAGACTCTTCTTCCCCATTGCCTTGGGGAAAC...AAAGCCCATGGGTCTTTCTGACTGGGAAGCCACAACTTGAATTTGGAAATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTGTGCCAGGCATGTTTCATTCCATGATGGTTCTAACCTGCTTAGGACTGGCTCAGTGACTGCTTaGGTTAAACCATGTTGTATT | + |
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Preference number: 2 (lower is better) Translates to: SLCARHVSFHDGSNLLRTGSVTA*VKPCCI Trigger: AATACAACATGGTTTAACCCAAGCAGTCACTGAGCC...AGTCCTAAGCAGGTTAGAACCATCATGGAATGAAACATGCCTGGCACAGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CCA 90 bp | AAGGATCCCGGAGAACAGCATGGTTTTCTTTTAATTAAACGGCCTTCCGGATGGCATGTTGTATTTCTATaGAAAGGATCTGTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: KDPGEQHGFLLIKRPSGWHVVFL*KGSVLL Trigger: GAGCAGCACAGATCCTTTCCATAGAAATACAACATG...CCATCCGGAAGGCCGTTTAATTAAAAGAAAACCATGCTGTTCTCCGGGATCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR GCA 90 bp | ATATTGCTTCCCAGAAGTCTCTCCCTATCTGGGTCACCTTGGTTTAGAGTTATAGAAGTAGAATTCTTCTaGAGCAGAAATTGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ILLPRSLSLSGSPWFRVIEVEFF*SRNWAR Trigger: TCTGGCCCAATTTCTGCTGCAGAAGAATTCTACTTC...TATAACTCTAAACCAAGGTGACCCAGATAGGGAGAGACTTCTGGGAAGCAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCTGTGCCAGGCATGTTTCATTCCATGATGGTTCTAACCTGCTTAGGACTAATGAGAGAGAAGACTaGTCTAAAAGTTTTCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: SLCARHVSFHDGSNLLRTNERED*SKSFLG Trigger: GCCTAGAAAACTTTTAGAGCAGTCTTCTCTCTCATT...AGTCCTAAGCAGGTTAGAACCATCATGGAATGAAACATGCCTGGCACAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTGTGCCAGGCATGTTTCATTCCATGATGGTTCTAACCTGCTTAGGACTATAACATCTTCTCTCTaGATCAACCTAAGAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: SLCARHVSFHDGSNLLRTITSSL*INLRMS Trigger: AGACATTCTTAGGTTGATCCAGAGAGAAGATGTTAT...AGTCCTAAGCAGGTTAGAACCATCATGGAATGAAACATGCCTGGCACAGAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR TCA 72 bp | TGGAAAGGATCTGTGCTGCTCCACCCTCCCGAGCAATaGGCCAAGACCAGGGCCTTACCGGCCCTCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: WKGSVLLHPPEQ*AKTRALPALRS Trigger: GCTCCTGAGGGCCGGTAAGGCCCTGGTCTTGGCTCATTGCTCGGGAGGGTGGAGCAGCACAGATCCTTTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR TCA 72 bp | CTTACCGGCCCTCAGGAGCCTCGCCTCCACTGTCAGTaGCACAGAAGCGGGATTGTTGGAGTTGAGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LTGPQEPRLHCQ*HRSGIVGVEVL Trigger: CAGGACCTCAACTCCAACAATCCCGCTTCTGTGTCACTGACAGTGGAGGCGAGGCTCCTGAGGGCCGGTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR GCA 72 bp | AAAATCTGCCACCGTGTCCTCTGCTTGCCAGGCTCCTaGAGGGCAAGGCAGAAGGATGGCACTGATCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: KICHRVLCLPGS*RARQKDGTDLR Trigger: TCTAAGATCAGTGCCATCCTTCTGCCTTGCCCTGCAGGAGCCTGGCAAGCAGAGGACACGGTGGCAGATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCATAAATCGACTGCCTTaGTGGCAAAATGGAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: VDDYSSASDPCGCRPCLGINRLP*WQNGDR Trigger: CCTGTCTCCATTTTGCCACAAAGGCAGTCGATTTAT...GCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| 3UTR CCA 72 bp | TCTGCAGGTAGAGTCCACACTACAAACCCTTCCACATaGTCTGAGCTGGGACTTGGAACCTCAACACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: SAGRVHTTNPST*SELGLGTSTQG Trigger: ACCCTGTGTTGAGGTTCCAAGTCCCAGCTCAGACCATGTGGAAGGGTTTGTAGTGTGGACTCTACCTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CAA 90 bp | CATAATTTCCAAATTCAAGTTGTGGCTTCCCAGTCAGAAAGACCCATGGGCTTTCACCGTGTCCTCTGCTaGCCAGGCTCCTGCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: HNFQIQVVASQSERPMGFHRVLC*PGSCRA Trigger: TGCCCTGCAGGAGCCTGGCAAGCAGAGGACACGGTG...AAAGCCCATGGGTCTTTCTGACTGGGAAGCCACAACTTGAATTTGGAAATTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| 3UTR-3UTR CAA 90 bp | ATATTGCTTCCCAGAAGTCTCTCCCTATCTGGGTCACCTTGGTTTAGAGTTATACACCGTGTCCTCTGCTaGCCAGGCTCCTGCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILLPRSLSLSGSPWFRVIHRVLC*PGSCRA Trigger: TGCCCTGCAGGAGCCTGGCAAGCAGAGGACACGGTG...TATAACTCTAAACCAAGGTGACCCAGATAGGGAGAGACTTCTGGGAAGCAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCTCCCATCCCTCCACTTCCTTCGCTTGCTCAAACCCAAAGCTACCCACTCCCTGTTTGGGCCTTTaGGCATCAATATTGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ISSHPSTSFACSNPKLPTPCLGL*ASILLP Trigger: GGGAAGCAATATTGATGCCAAAAGGCCCAAACAGGG...AGTGGGTAGCTTTGGGTTTGAGCAAGCGAAGGAAGTGGAGGGATGGGAGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR TCA 72 bp | GACACAGAAGCGGGATTGTTGGAGTTGAGGTCCTGGTaGTGGATTTCTTCTAGGCACTCACTAGCTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTEAGLLELRSW*WISSRHSLAHW Trigger: CCAGTGAGCTAGTGAGTGCCTAGAAGAAATCCATCACCAGGACCTCAACTCCAACAATCCCGCTTCTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR CCA 72 bp | GTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTTTaGCATCAATATTGCTTCCCAGAAGTCTCTCCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VTPVAVDPVWAF*HQYCFPEVSPY Trigger: ATAGGGAGAGACTTCTGGGAAGCAATATTGATGCCAAAAGGCCCAAACAGGGTCTACAGCCACAGGGGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR CCA 72 bp | CTGCCTCATCTTGCAGCTGAGCTAACTCCTAGACCATaGAAGAATGGACAGAAACCCCAGAAGTACCTACCG | + |
|
Preference number: 3 (lower is better) Translates to: LPHLAAELTPRP*KNGQKPQKYLP Trigger: CGGTAGGTACTTCTGGGGTTTCTGTCCATTCTTCCATGGTCTAGGAGTTAGCTCAGCTGCAAGATGAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR TCA 72 bp | GTGCTGGAATTACCAGTGTTTGCTACCATGCTTGGTTaGTGCAGTGCTAGAGATCTGACCCAGGGTTTCACG | + |
|
Preference number: 3 (lower is better) Translates to: VLELPVFATMLG*CSARDLTQGFT Trigger: CGTGAAACCCTGGGTCAGATCTCTAGCACTGCATCAACCAAGCATGGTAGCAAACACTGGTAATTCCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR GCA 72 bp | GCTGTAGACCCTGTTTGGGCCTTTTGGCATCAATATTaGTTCCCAGAAGTCTCTCCCTATCTGGGTCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: AVDPVWAFWHQY*FPEVSPYLGHL Trigger: AAGGTGACCCAGATAGGGAGAGACTTCTGGGAAGCAATATTGATGCCAAAAGGCCCAAACAGGGTCTACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR GCA 72 bp | AGAGCCTGGAAGACATTTTTGGCTGATGTTGGAGTCTaGTCTACAGTTGGTAGGGGTGCCGTAACACCAATC | + |
|
Preference number: 3 (lower is better) Translates to: RAWKTFLADVGV*STVGRGAVTPI Trigger: GATTGGTGTTACGGCACCCCTACCAACTGTAGAGCAGACTCCAACATCAGCCAAAAATGTCTTCCAGGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR CCA 72 bp | TGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTaGGGTATATTGTGTGTTGGGGGTGTCTCCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CWPGCNHIAPEN*GILCVGGVSIW Trigger: CCAGATGGAGACACCCCCAACACACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR CCA 72 bp | CTGACCTTGGTCTTCCTGACTTCAGCTCCCTTGTGCTaGAATTACCAGTGTTTGCTACCATGCTTGGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTLVFLTSAPLC*NYQCLLPCLVD Trigger: ATCAACCAAGCATGGTAGCAAACACTGGTAATTCCAGCACAAGGGAGCTGAAGTCAGGAAGACCAAGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR TCA 72 bp | TTTGCTTTGGAGATCCCTAGAGGCAGGAGGGCTCAGTaGCTGCTTGGGTTAAACCATGTTGTATTTCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: FALEIPRGRRAQ*LLGLNHVVFLW Trigger: CCATAGAAATACAACATGGTTTAACCCAAGCAGTCACTGAGCCCTCCTGCCTCTAGGGATCTCCAAAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR TCA 72 bp | AGACAAGATCACAAATCTTCTCCCAACACCAGAGTCTaGGGCCTCATGAGCACACTTCTTTCCTTCACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RQDHKSSPNTRV*GLMSTLLSFTL Trigger: AAGGGTGAAGGAAAGAAGTGTGCTCATGAGGCCTCAGACTCTGGTGTTGGGAGAAGATTTGTGATCTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR CCA 72 bp | TCTGCAAGTGACTATGAAGAGCCTGGAAGACATTTTTaGCTGATGTTGGAGTCTGCTCTACAGTTGGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SASDYEEPGRHF*LMLESALQLVG Trigger: CCCTACCAACTGTAGAGCAGACTCCAACATCAGCCAAAAATGTCTTCCAGGCTCTTCATAGTCACTTGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR TCA 72 bp | ACAAATCTTCTCCCAACACCAGAGTCTGAGGCCTCATaGGCACACTTCTTTCCTTCACCCTTTCTAAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TNLLPTPESEAS*AHFFPSPFLKV Trigger: AACCTTTAGAAAGGGTGAAGGAAAGAAGTGTGCTCATGAGGCCTCAGACTCTGGTGTTGGGAGAAGATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR TCA 72 bp | CACTTGACTTGGTATGTAGTCAAAGGCGTGGTACATTaGGTAAGGCTTGAAAGCAAGGTCTGTTCTCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: HLTWYVVKGVVH*VRLESKVCSHP Trigger: TGGGTGAGAACAGACCTTGCTTTCAAGCCTTACTCAATGTACCACGCCTTTGACTACATACCAAGTCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTGTGGAAAGCATTATGATATaGGCAGAAGGGAACGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SAGQDVIILHQKTGVYCVESIMI*AEGNGD Trigger: GTCACCGTTCCCTTCTGCCAATATCATAATGCTTTC...CACACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR CCA 72 bp | TCACCTTGGTTTAGAGTTATAAATCGACTGCCTTTGTaGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPWFRVINRLPL*QNGDRRKTWVS Trigger: ACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGGCAGTCGATTTATAACTCTAAACCAAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR TCA 72 bp | ACTAGCTCACTGGTAGAGGAAGAGCTAATGAGTGATTaGTTTGTCATAGTTCCTAATCAGCCTAGGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSSLVEEELMSD*FVIVPNQPRFS Trigger: TGAGAACCTAGGCTGATTAGGAACTATGACAAATCAATCACTCATTAGCTCTTCCTCTACCAGTGAGCTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR CCA 72 bp | CAGGCACAAGCTGTTAGTTTGAATGATAAAGAGCAGTaGATACAAAGTCATTGGCTTATTTGTAGAAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QAQAVSLNDKEQ*IQSHWLICRRA Trigger: GGCCCTTCTACAAATAAGCCAATGACTTTGTATCCACTGCTCTTTATCATTCAAACTAACAGCTTGTGCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCACAAGCTGTTAGTTTGAATGATAAAGAGCAGTGGATACAAAGTCATTGGTACTTTGCAACTGATTaGTTTGGTTCCAGTAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: QAQAVSLNDKEQWIQSHWYFATD*FGSSRL Trigger: TAGCCTACTGGAACCAAACAAATCAGTTGCAAAGTA...CCAATGACTTTGTATCCACTGCTCTTTATCATTCAAACTAACAGCTTGTGCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR GCA 72 bp | TTTATACTCATTCATAATAATGAGATGAATGTAGCTTaGAGCAAGGCTGGGAGGGAAATATTGGTAGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FILIHNNEMNVA*SKAGREILVEG Trigger: TCCCTCTACCAATATTTCCCTCCCAGCCTTGCTGCAAGCTACATTCATCTCATTATTATGAATGAGTATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR TCA 72 bp | TTTGATAACATTAAAGTTACATCTGCATTAAAGTACTaGGGAAAGCCTCCCATTTACAATCGTGCCTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FDNIKVTSALKY*GKPPIYNRASL Trigger: AAGAGAGGCACGATTGTAAATGGGAGGCTTTCCTCAGTACTTTAATGCAGATGTAACTTTAATGTTATCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR TCA 72 bp | TTCACGTATGTTAAGCAAACACTCTATAACCAAGCTTaGTCCTACCCTTCTATCTCCTATAAATATATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FTYVKQTLYNQA*SYPSISYKYIH Trigger: GTGAATATATTTATAGGAGATAGAAGGGTAGGATCAAGCTTGGTTATAGAGTGTTTGCTTAACATACGTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR TCA 90 bp | GTGGACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTGCACAGGTGTTGGTaGACTCGTCCCGTGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDDYSSASDPCGCRPCLGLHRCW*TRPVHR Trigger: CCTATGCACGGGACGAGTTCACCAACACCTGTGCAG...GCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | GACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTGCGCCTGGCGACATCTaGGTAGGCCAACTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DDYSSASDPCGCRPCLGLAPGDI*VGQLDL Trigger: GAGATCGAGTTGGCCTACGCAGATGTCGCCAGGCGC...AAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGGCTCCTCCATTCTCCTaGGGTTCCCAGGAGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGVSIWPTVRNSEHLELAPPFS*GSQERG Trigger: GCCTCTCTCCTGGGAACCTCAGGAGAATGGAGGAGC...CAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGCCCCATCCAGGAACTTaGGCTGGGACCCCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VGGVSIWPTVRNSEHLELPHPGT*AGTPSR Trigger: ACGAGAAGGGGTCCCAGCGCAAGTTCCTGGATGGGG...CAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR TCA 90 bp | GACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTAGCACCTTGCTGTGCTaGACCCTGAAGCTCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DDYSSASDPCGCRPCLGLSTLLC*TLKLSK Trigger: CTTACTGAGCTTCAGGGTTCAGCACAGCAAGGTGCT...AAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGTGGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGTGCTGGCCAGGATGCTTGGGCAGCAGATTaGAGTCGGCCAGGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLWQNGDRRKTWVSAGQDAWAAD*SRPGSA Trigger: AGCTGACCCTGGCCGACTGCAATCTGCTGCCCAAGC...ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | GCCATTGGGAGAAGTAGAATTCTTCTGCAGCAGAAATTGGGCCAGACAGCCAAGTCCAGGAACTTGCGCTaGGACCCCTTCTCGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AIGRSRILLQQKLGQTAKSRNLR*DPFSSP Trigger: CGGGGACGAGAAGGGGTCCCAGCGCAAGTTCCTGGA...CTTGGCTGTCTGGCCCAATTTCTGCTGCAGAAGAATTCTACTTCTCCCAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTTCCTCCTGCAGGTCTaGAGCCTCATCTGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSPSGPLSEIVSIWNFLLQV*SLICAP Trigger: AGGAGCACAGATGAGGCTCCAGACCTGCAGGAGGAA...GTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | TCCTGCTTCCTCCCTCCTTGGATCAATGGTCACTCTTaGCTTTGGAGATCCCTAGAGGCAGGAGGGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCFLPPWINGHS*LWRSLEAGGLS Trigger: ACTGAGCCCTCCTGCCTCTAGGGATCTCCAAAGCAAAGAGTGACCATTGATCCAAGGAGGGAGGAAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR TCA 90 bp | GGCAATGGGGAAGAAGAGTCTGTAGAGCTGAAAGCCATTGGGAGAAGTAGAATTGCTCCTCCATTCTCCTaGGGTTCCCACGGGAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: GNGEEESVELKAIGRSRIAPPFS*GSHGRR Trigger: GCGTCTCCCGTGGGAACCTCAGGAGAATGGAGGAGC...AATTCTACTTCTCCCAATGGCTTTCAGCTCTACAGACTCTTCTTCCCCATTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTGTGTCAGGAAGGGCGGGTaGGTGCCAGGAGCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCWPGCNHIAPENWGILCVRKGG*VPGARL Trigger: CAACCTGGCTCCTGGCACGCACCCGCCCTTCCTGAC...ACACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | AAGACATTTTTGGCTGATGTTGGAGTCTGCTCTACAGTTGGTAGGGGTGCCGTAGCGCCTGGCGACATCTaGGTAGGCCAACTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTFLADVGVCSTVGRGAVAPGDI*VGQLDL Trigger: GAGATCGAGTTGGCCTACGCAGATGTCGCCAGGCGC...TACGGCACCCCTACCAACTGTAGAGCAGACTCCAACATCAGCCAAAAATGTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR GCA 90 bp | GTGGACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCGGAAGATCTCAGGGTTaGTGGAAGCTGCTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VDDYSSASDPCGCRPCLGGRSQG*WKLLLF Trigger: AAAAAGAAGCAGCTTCCAGCAACCCTGAGATCTTCC...GCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | GACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTGCCTGTCATCTCAGCTaGGATGTCATAGTTTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DDYSSASDPCGCRPCLGLACHLS*DVIVSV Trigger: TACCGAAACTATGACATCCCAGCTGAGATGACAGGC...AAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | TCTCAGACCAGCCTCCAGTTTGCTATGCAGCTGACCTaGGTCTTCCTGACTTCAGCTCCCTTGTGCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQTSLQFAMQLT*VFLTSAPLCWN Trigger: ATTCCAGCACAAGGGAGCTGAAGTCAGGAAGACCAAGGTCAGCTGCATAGCAAACTGGAGGCTGGTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR GCA 90 bp | AAGGATCCCGGAGAACAGCATGGTTTTCTTTTAATTAAACGGCCTTCCGGATGGCCCCATCCAGGAACTTaGGCTGGGACCCCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KDPGEQHGFLLIKRPSGWPHPGT*AGTPSR Trigger: ACGAGAAGGGGTCCCAGCGCAAGTTCCTGGATGGGG...CCATCCGGAAGGCCGTTTAATTAAAAGAAAACCATGCTGTTCTCCGGGATCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR GCA 90 bp | AAGGATCCCGGAGAACAGCATGGTTTTCTTTTAATTAAACGGCCTTCCGGATGGGCTTGGGCAGCAGATTaGAGTCGGCCAGGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KDPGEQHGFLLIKRPSGWAWAAD*SRPGSA Trigger: AGCTGACCCTGGCCGACTGCAATCTGCTGCCCAAGC...CCATCCGGAAGGCCGTTTAATTAAAAGAAAACCATGCTGTTCTCCGGGATCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCATTATTCCAGGAACTTGCGCTaGGACCCCTTCTCGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGERSWHFKLLAHLRKHYSRNLR*DPFSSP Trigger: CGGGGACGAGAAGGGGTCCCAGCGCAAGTTCCTGGA...ATAATGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR TCA 90 bp | GACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTGTTTTTGATGTAGGCTaGGAACTTGGAGAAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: DDYSSASDPCGCRPCLGLVFDVG*ELGEDV Trigger: GACATCTTCTCCAAGTTCTCAGCCTACATCAAAAAC...AAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGCTGCACAGGTGTTGGTaGACTCGTCCCGTGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQCWPGCNHIAPENWGILLHRCW*TRPVHR Trigger: CCTATGCACGGGACGAGTTCACCAACACCTGTGCAG...CAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | AAGACATTTTTGGCTGATGTTGGAGTCTGCTCTACAGTTGGTAGGGGTGCCGTAAGGGACAGTTGCCAATaGTTTCCCCGTCGATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTFLADVGVCSTVGRGAVRDSCQ*FPRRSQ Trigger: CTGGGATCGACGGGGAAAGCATTGGCAACTGTCCCT...TACGGCACCCCTACCAACTGTAGAGCAGACTCCAACATCAGCCAAAAATGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR GCA 90 bp | AACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCAAGGGACAGTTGCCAATaGTTTCCCCGTCGATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NEGREKLAFQVVSASEKARDSCQ*FPRRSQ Trigger: CTGGGATCGACGGGGAAAGCATTGGCAACTGTCCCT...TGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | GGAACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGGAGAGAAGGGACAGTTaGCAATGCTTTCCCCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTRGERSWHFKLLAHLRKERRDS*QCFPRR Trigger: TCGACGGGGAAAGCATTGGCAACTGTCCCTTCTCTC...CTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGTGGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGTGCTGGCCAGGATGATCTCACTGTCAGCTaGACAGGTGTTGGTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PLWQNGDRRKTWVSAGQDDLTVS*TGVGEL Trigger: GAGTTCACCAACACCTGTGCAGCTGACAGTGAGATC...ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGTGGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGTGCTGGCCAGGATTGTAGGCTGAGAACTTaGAGAAGATGTCGATGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLWQNGDRRKTWVSAGQDCRLRT*RRCRCP Trigger: CGGGCATCGACATCTTCTCCAAGTTCTCAGCCTACA...ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGTTTTAGAGGCTCTGGGTCCTaGCTTGGTGAATGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVSPSGPLSEIVSIWNCFRGSGS*LGECES Trigger: AGACTCACATTCACCAAGCCAGGACCCAGAGCCTCT...AAAACAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | GGCTGTAGACCCTGTTTGGGCCTTTTGGCATCAATATaGCTTCCCAGAAGTCTCTCCCTATCTGGGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GCRPCLGLLASI*LPRSLSLSGSP Trigger: AGGTGACCCAGATAGGGAGAGACTTCTGGGAAGCAATATTGATGCCAAAAGGCCCAAACAGGGTCTACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | AGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTTaGGCATCAATATTGCTTCCCAGAAGTCTCTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SDPCGCRPCLGL*ASILLPRSLSL Trigger: TAGGGAGAGACTTCTGGGAAGCAATATTGATGCCAAAAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTCCCATCCCTCCACTTCCTTCGCTTGCTCAAACCCAAAGCTACCCACTAGATTCCCGGTGTTTTaGAGCCAGTTTGGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: ISSHPSTSFACSNPKLPTRFPVF*SQFGVL Trigger: AAGTACCCCAAACTGGCTGCAAAACACCGGGAATCT...AGTGGGTAGCTTTGGGTTTGAGCAAGCGAAGGAAGTGGAGGGATGGGAGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR GCA 90 bp | GGAACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGGGTGAACTCGTCCCGTaGATAGGCATTCTTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTRGERSWHFKLLAHLRKGELVP*IGILEV Trigger: TACCTCAAGAATGCCTATGCACGGGACGAGTTCACC...CTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGTTTTGTTTTGCAGCCAGTTTaGGGTACTTCTCGGGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GVSPSGPLSEIVSIWNCFVLQPV*GTSRGL Trigger: TAACCCCCGAGAAGTACCCCAAACTGGCTGCAAAAC...AAAACAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTCCCTTCTCGTCCCCGTaGGTGTTGGTGTCAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGQDVIILHQKTGVYCPFSSP*VLVSIS Trigger: GGAGATTGACACCAACACCCACGGGGACGAGAAGGG...ACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACCCTGGCTTTCTAGCCTaGTGGCATACAGATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSPSGPLSEIVSIWNPGFLA*WHTDHF Trigger: AAAATGATCTGTATGCCACCAGGCTAGAAAGCCAGG...GTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | AACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCAAGACGCTCCGGGTCCTaGCTTAGTGAATGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NEGREKLAFQVVSASEKARRSGS*LSECEE Trigger: TTCCTCACATTCACTAAGCCAGGACCCGGAGCGTCT...TGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | AACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCAAGGAATCCTGGCTTGTaGCAAGCACCTTGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEGREKLAFQVVSASEKARNPGL*QAPCCA Trigger: AGCACAGCAAGGTGCTTGCCACAAGCCAGGATTCCT...TGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | TCCCTGACGATGATGTATCTGTCCATCACCTTGCATTaGCTGAGGAACGAGGGGAGAGAGAAGCTGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTMMYLSITLH*LRNEGREKLAF Trigger: AAATGCCAGCTTCTCTCTCCCCTCGTTCCTCAGCAAATGCAAGGTGATGGACAGATACATCATCGTCAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | CACGCTAGTCTTCATATCTTTAACACCAGCCCACCTTaGGAAAATAGGGGTGTGAGCTGCGTGAGTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HASLHIFNTSPP*ENRGVSCVSSP Trigger: GGGTGAACTCACGCAGCTCACACCCCTATTTTCCAAAGGTGGGCTGGTGTTAAAGATATGAAGACTAGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR CAA 72 bp | ACACTACAAACCCTTCCACATGGTCTGAGCTGGGACTaGGAACCTCAACACAGGGTGACTGCAGATGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQTLPHGLSWD*EPQHRVTADGK Trigger: TTTACCATCTGCAGTCACCCTGTGTTGAGGTTCCAAGTCCCAGCTCAGACCATGTGGAAGGGTTTGTAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR CAA 72 bp | AATACAATTTACCTGGGCCTGGAAGGTCCCCAGAACTaGTCAACAGCAACGTCTCTCTGTGCCAGGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTIYLGLEGPQN*STATSLCARHV Trigger: AACATGCCTGGCACAGAGAGACGTTGCTGTTGACAAGTTCTGGGGACCTTCCAGGCCCAGGTAAATTGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| 3UTR CAA 72 bp | ATGCAGCTGACCTTGGTCTTCCTGACTTCAGCTCCCTaGTGCTGGAATTACCAGTGTTTGCTACCATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MQLTLVFLTSAP*CWNYQCLLPCL Trigger: CAAGCATGGTAGCAAACACTGGTAATTCCAGCACAAGGGAGCTGAAGTCAGGAAGACCAAGGTCAGCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR TCA 90 bp | ACTGGCATTTACCGGAATAGCTCTTATCCAGAATTTCTGCAGGTAGAGTCCACATCTTCACATCCCCATTaGAGGTCAGGAAGGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGIYRNSSYPEFLQVESTSSHPH*RSGRAG Trigger: ACCCGCCCTTCCTGACCTTCAATGGGGATGTGAAGA...TGTGGACTCTACCTGCAGAAATTCTGGATAAGAGCTATTCCGGTAAATGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTGTGTCTTCACATCCCCATTaGAGGTCAGGAAGGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAGQDVIILHQKTGVYCVSSHPH*RSGRAG Trigger: ACCCGCCCTTCCTGACCTTCAATGGGGATGTGAAGA...CACACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR TCA 90 bp | GTGTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACGTTTTTGATGTAGGCTaGGAACTTGGAGAAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGVSPSGPLSEIVSIWNVFDVG*ELGEDV Trigger: GACATCTTCTCCAAGTTCTCAGCCTACATCAAAAAC...GTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTGTGCCAGGCATGTTTCATTCCATGATGGTTCTAACCTGCTTAGGACTGAGAGAAGGGACAGTTaGCAATGCTTTCCCCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCARHVSFHDGSNLLRTERRDS*QCFPRR Trigger: TCGACGGGGAAAGCATTGGCAACTGTCCCTTCTCTC...AGTCCTAAGCAGGTTAGAACCATCATGGAATGAAACATGCCTGGCACAGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR GCA 90 bp | GGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGTTTTACAATCTTGACCACATaGAGCTTGGGCAGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: GVSPSGPLSEIVSIWNCFTILTT*SLGSRL Trigger: CAATCTGCTGCCCAAGCTGCATGTGGTCAAGATTGT...AAAACAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCATTATGCGTCACTTTCCTCCTaGAGGTCTGGAGCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RGERSWHFKLLAHLRKHYASLSS*RSGASS Trigger: AGATGAGGCTCCAGACCTGCAGGAGGAAAGTGACGC...ATAATGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | AAGACATTTTTGGCTGATGTTGGAGTCTGCTCTACAGTTGGTAGGGGTGCCGTATGTAGGCTGAGAACTTaGAGAAGATGTCGATGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KTFLADVGVCSTVGRGAVCRLRT*RRCRCP Trigger: CGGGCATCGACATCTTCTCCAAGTTCTCAGCCTACA...TACGGCACCCCTACCAACTGTAGAGCAGACTCCAACATCAGCCAAAAATGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR CCA 90 bp | GTCAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTCCAGGGAGGCTGGGGTaGCTTCATCACTTTTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSAGQDVIILHQKTGVYCPGRLG*LHHFSR Trigger: TCTCGAAAAGTGATGAAGCCACCCCAGCCTCCCTGG...ACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTGTGTGGCTCCAGGGAGGCTaGGGTGGCTTCATCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAGQDVIILHQKTGVYCVWLQGG*GGFITF Trigger: AAAAGTGATGAAGCCACCCCAGCCTCCCTGGAGCCA...CACACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGTGGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGTGCTGGCCAGGATAGATCTCAGGGTTGCTaGAAGCTGCTTCTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLWQNGDRRKTWVSAGQDRSQGC*KLLLFL Trigger: GAGAAAAAGAAGCAGCTTCCAGCAACCCTGAGATCT...ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | CCAAGCCCAAGGCAGTCCATAATTTCCAAATTCAAGTaGTGGCTTCCCAGTCAGAAAGACCCATGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPRQSIISKFK*WLPSQKDPWAF Trigger: GAAAGCCCATGGGTCTTTCTGACTGGGAAGCCACAACTTGAATTTGGAAATTATGGACTGCCTTGGGCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR GCA 90 bp | AACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCAACAATCTTGACCACATaGAGCTTGGGCAGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: NEGREKLAFQVVSASEKATILTT*SLGSRL Trigger: CAATCTGCTGCCCAAGCTGCATGTGGTCAAGATTGT...TGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | GGTCAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGGATCTCACTGTCAGCTaGACAGGTGTTGGTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GQCWPGCNHIAPENWGILDLTVS*TGVGEL Trigger: GAGTTCACCAACACCTGTGCAGCTGACAGTGAGATC...CAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | GGTCAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGAGATTCCCGGTGTTTTaGAGCCAGTTTGGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GQCWPGCNHIAPENWGILRFPVF*SQFGVL Trigger: AAGTACCCCAAACTGGCTGCAAAACACCGGGAATCT...CAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTGTGGTGAACTCGTCCCGTaGATAGGCATTCTTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QCWPGCNHIAPENWGILCGELVP*IGILEV Trigger: TACCTCAAGAATGCCTATGCACGGGACGAGTTCACC...ACACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCATTATAGGGTTGCTGGAAGCTaGTTCTTTTTCTCCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: RGERSWHFKLLAHLRKHYRVAGS*FFFSQP Trigger: GGGTTGGGAGAAAAAGAAGCAGCTTCCAGCAACCCT...ATAATGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | ACTGCCTTTGTGGCAAAATGGAGACAGGAGGAAAACTaGGGTCAGTGCTGGCCAGGATGTAATCATATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TAFVAKWRQEEN*GQCWPGCNHIA Trigger: TGCAATATGATTACATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | ATATTGCTTCCCAGAAGTCTCTCCCTATCTGGGTCACCTTGGTTTAGAGTTATAGTTTTGCAGCCAGTTTaGGGTACTTCTCGGGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILLPRSLSLSGSPWFRVIVLQPV*GTSRGL Trigger: TAACCCCCGAGAAGTACCCCAAACTGGCTGCAAAAC...TATAACTCTAAACCAAGGTGACCCAGATAGGGAGAGACTTCTGGGAAGCAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCAAGTGACTATGAAGAGCCTGGAAGACATTTTTGGCTGATGTTGGAGTCTGCCTGTCATCTCAGCTaGGATGTCATAGTTTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SASDYEEPGRHFWLMLESACHLS*DVIVSV Trigger: TACCGAAACTATGACATCCCAGCTGAGATGACAGGC...AGACTCCAACATCAGCCAAAAATGTCTTCCAGGCTCTTCATAGTCACTTGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR TCA 90 bp | GTAGAGCTGAAAGCCATTGGGAGAAGTAGAATTCTTCTGCAGCAGAAATTGGGCGTTGTTTGGTGTTTTTaGTGTAGGCTGAGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VELKAIGRSRILLQQKLGVVWCF*CRLRTW Trigger: CCAAGTTCTCAGCCTACATCAAAAACACCAAACAAC...GCCCAATTTCTGCTGCAGAAGAATTCTACTTCTCCCAATGGCTTTCAGCTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCATTATCTGGAGCCTCATCTGTaGTCCTCTTTTGGATTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RGERSWHFKLLAHLRKHYLEPHL*SSFGFY Trigger: ATAAAATCCAAAAGAGGAGCACAGATGAGGCTCCAG...ATAATGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR CCA 90 bp | ATATTGCTTCCCAGAAGTCTCTCCCTATCTGGGTCACCTTGGTTTAGAGTTATAGGCTTTCTAGCCTGGTaGCATACAGATCATTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLPRSLSLSGSPWFRVIGFLAW*HTDHFQ Trigger: CTGAAAATGATCTGTATGCCACCAGGCTAGAAAGCC...TATAACTCTAAACCAAGGTGACCCAGATAGGGAGAGACTTCTGGGAAGCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| 3UTR CAA 72 bp | AAGGTTCCTGTAGCGATGGAAATGAATCGGCTCATTTaGCCTCTTCAAAGCCCCTTCAGGTTTATAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVPVAMEMNRLI*PLQSPFRFINF Trigger: GAAGTTTATAAACCTGAAGGGGCTTTGAAGAGGCAAAATGAGCCGATTCATTTCCATCGCTACAGGAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
||
| CDS-3UTR CCA 90 bp | GTCAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTTTTTCAGAGTCTTCATaGACTCTGTCATACAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSAGQDVIILHQKTGVYCFSESS*TLSYKG Trigger: TCCTTTGTATGACAGAGTCCATGAAGACTCTGAAAA...ACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS GCA 90 bp | GCGCCTGGCGACATCTGCGTAGGCCAACTCGATCTCACTGTCAGCTaGACAGGTGTTGGTGAACTCGTCCCGTGCATAGGCATTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: APGDICVGQLDLTVS*TGVGELVPCIGILE Trigger: CTCAAGAATGCCTATGCACGGGACGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCAGATGTCGCCAGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS CCA 90 bp | CATCCAGGAACTTGCGCTGGGACCCCTTCTCGTCCCCGTGGGTGTTaGTGTCAATCTCCTCTGGCAGAGGGCTGTTTAGGTAGTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HPGTCAGTPSRPRGC*CQSPLAEGCLGSHP Trigger: TGGATGACTACCTAAACAGCCCTCTGCCAGAGGAGATTGACACCAACACCCACGGGGACGAGAAGGGGTCCCAGCGCAAGTTCCTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS-3UTR CAA 90 bp | GACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTTCAGCTGCACAGGTGTaGGTGAACTCGTCCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DDYSSASDPCGCRPCLGLSAAQV*VNSSRA Trigger: TGCACGGGACGAGTTCACCAACACCTGTGCAGCTGA...AAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
||
| CDS TCA 90 bp | GAATGTGAGGAAGGCACGTCTTCCTCGGTTGCTCCTCCATTCTCCTaGGGTTCCCAGGAGAGAGGCTCTGGGTCCTGGCTTGGTGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: ECEEGTSSSVAPPFS*GSQERGSGSWLGEC Trigger: ACATTCACCAAGCCAGGACCCAGAGCCTCTCTCCTGGGAACCTCAGGAGAATGGAGGAGCAACCGAGGAAGACGTGCCTTCCTCACATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS-3UTR CAA 90 bp | GACGACTACTCTTCAGCCAGTGACCCCTGTGGCTGTAGACCCTGTTTGGGCCTTGCACATCTTCCTCGGTaGCTCCTCCATTCTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DDYSSASDPCGCRPCLGLAHLPR*LLHSPE Trigger: CTCAGGAGAATGGAGGAGCAACCGAGGAAGATGTGC...AAGGCCCAAACAGGGTCTACAGCCACAGGGGTCACTGGCTGAAGAGTAGTCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
||
| CDS CCA 90 bp | CCGGCAGGAGGTAGCCATCTGCTTCTGGCTCCAGGGAGGCTGGGGTaGCTTCATCACTTTTCGAGACATACGGTGACAAGTATTCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: PAGGSHLLLAPGRLG*LHHFSRHTVTSIRT Trigger: AGTACGAATACTTGTCACCGTATGTCTCGAAAAGTGATGAAGCCACCCCAGCCTCCCTGGAGCCAGAAGCAGATGGCTACCTCCTGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | GTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGGCTTCCTCAGCGCCTTaGTCAAGCCTCTCTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: VGGVSIWPTVRNSEHLELASSAP*SSLSQG Trigger: CCCTTGAGAGAGGCTTGACAAAGGCGCTGAGGAAGC...CAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS TCA 90 bp | AGGCTGATAGAGGAATCCTGGCTTGTGGCAAGCACCTTGCTGTGCTaGACCCTGAAGCTCAGTAAGGAAGGCACGTCTTCCTCGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: RLIEESWLVASTLLC*TLKLSKEGTSSSVA Trigger: AGCAACCGAGGAAGACGTGCCTTCCTTACTGAGCTTCAGGGTTCAGCACAGCAAGGTGCTTGCCACAAGCCAGGATTCCTCTATCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | CCTTTGTGGCAAAATGGAGACAGGAGGAAAACTTGGGTCAGTGCTGGCCAGGATGTCTTCACATCCCCATaGAAGGTCAGGAAGGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: PLWQNGDRRKTWVSAGQDVFTSP*KVRKGG Trigger: CCCGCCCTTCCTGACCTTCAATGGGGATGTGAAGAC...ATCCTGGCCAGCACTGACCCAAGTTTTCCTCCTGTCTCCATTTTGCCACAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | GCCATTGGGAGAAGTAGAATTCTTCTGCAGCAGAAATTGGGCCAGACAGCCAAGTCGTCCCCGTGGGTGTaGGTGTCAATCTCCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: AIGRSRILLQQKLGQTAKSSPWV*VSISSG Trigger: GCCAGAGGAGATTGACACCAACACCCACGGGGACGA...CTTGGCTGTCTGGCCCAATTTCTGCTGCAGAAGAATTCTACTTCTCCCAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | AACGAGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCATCCCCATCCAGGAACTaGCGCTGGGACCCCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: NEGREKLAFQVVSASEKASPSRN*RWDPFS Trigger: CGAGAAGGGGTCCCAGCGCAAGTTCCTGGATGGGGA...TGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCTCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | GTGTTGGGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTCCACGGTGGTGACATaGAACACGACTCCTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VLGVSPSGPLSEIVSIWNSTVVT*NTTPFS Trigger: GCTGAAAGGAGTCGTGTTCAATGTCACCACCGTGGA...GTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCCCAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | GGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGTTTTGTCTTCACATCCCCATaGAAGGTCAGGAAGGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: GVSPSGPLSEIVSIWNCFVFTSP*KVRKGG Trigger: CCCGCCCTTCCTGACCTTCAATGGGGATGTGAAGAC...AAAACAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | GGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGTTTTGCTCTGGGTCCTGGCTaGGTGAATGTGAGTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GVSPSGPLSEIVSIWNCFALGPG*VNVSLP Trigger: TGGGAGACTCACATTCACCAAGCCAGGACCCAGAGC...AAAACAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | ACTGGCATTTACCGGAATAGCTCTTATCCAGAATTTCTGCAGGTAGAGTCCACATCCCCATCCAGGAACTaGCGCTGGGACCCCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: TGIYRNSSYPEFLQVESTSPSRN*RWDPFS Trigger: CGAGAAGGGGTCCCAGCGCAAGTTCCTGGATGGGGA...TGTGGACTCTACCTGCAGAAATTCTGGATAAGAGCTATTCCGGTAAATGCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| CDS-3UTR CAA 90 bp | GGGGTGTCTCCATCTGGCCCACTGTCAGAAATAGTGAGCATCTGGAACTGTTTTACACGTCTTCCTCGGTaGCTCCTCCATTCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GVSPSGPLSEIVSIWNCFTRLPR*LLHSPE Trigger: CTCAGGAGAATGGAGGAGCAACCGAGGAAGACGTGT...AAAACAGTTCCAGATGCTCACTATTTCTGACAGTGGGCCAGATGGAGACACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | AAGGATCCCGGAGAACAGCATGGTTTTCTTTTAATTAAACGGCCTTCCGGATGGGCTTCCTCAGCGCCTTaGTCAAGCCTCTCTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: KDPGEQHGFLLIKRPSGWASSAP*SSLSQG Trigger: CCCTTGAGAGAGGCTTGACAAAGGCGCTGAGGAAGC...CCATCCGGAAGGCCGTTTAATTAAAAGAAAACCATGCTGTTCTCCGGGATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| CDS-3UTR CAA 90 bp | AGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCATTATTCGTCCCCGTGGGTGTaGGTGTCAATCTCCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RGERSWHFKLLAHLRKHYSSPWV*VSISSG Trigger: GCCAGAGGAGATTGACACCAACACCCACGGGGACGA...ATAATGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTGCTGGCCAGGATGTAATCATATTGCACCAGAAAACTGGGGTATATTGTTCAGCTGCACAGGTGTaGGTGAACTCGTCCCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: VSAGQDVIILHQKTGVYCSAAQV*VNSSRA Trigger: TGCACGGGACGAGTTCACCAACACCTGTGCAGCTGA...ACAATATACCCCAGTTTTCTGGTGCAATATGATTACATCCTGGCCAGCACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | AGGGGAGAGAGAAGCTGGCATTTCAAGTTGTTAGCGCATCTGAGAAAGCATTATGCACGTCTTCCTCGGTaGCTCCTCCATTCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RGERSWHFKLLAHLRKHYARLPR*LLHSPE Trigger: CTCAGGAGAATGGAGGAGCAACCGAGGAAGACGTGC...ATAATGCTTTCTCAGATGCGCTAACAACTTGAAATGCCAGCTTCTCTCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS GCA 90 bp | GATCCCAGCCTTCACAAACAGGAAGATCTCAGGGTTGCTGGAAGCTaGTTCTTTTTCTCCCAACCCAATAGCAGCAGAAAGGCTGATAGA | + |
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Preference number: 5 (lower is better) Translates to: DPSLHKQEDLRVAGS*FFFSQPNSSRKADR Trigger: TCTATCAGCCTTTCTGCTGCTATTGGGTTGGGAGAAAAAGAAGCAGCTTCCAGCAACCCTGAGATCTTCCTGTTTGTGAAGGCTGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CCA 90 bp | TGGCTTTCTAGCCTGGTGGCATACAGATCATTTTCAGAGTCTTCATaGACTCTGTCATACAAAGGAGCGTCACTTTCCTCCTGCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: WLSSLVAYRSFSESS*TLSYKGASLSSCRS Trigger: AGACCTGCAGGAGGAAAGTGACGCTCCTTTGTATGACAGAGTCCATGAAGACTCTGAAAATGATCTGTATGCCACCAGGCTAGAAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | GGCAATGGGGAAGAAGAGTCTGTAGAGCTGAAAGCCATTGGGAGAAGTAGAATTAGGAAGATCTCAGGGTaGCTGGAAGCTGCTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: GNGEEESVELKAIGRSRIRKISG*LEAASF Trigger: AAAAGAAGCAGCTTCCAGCAACCCTGAGATCTTCCT...AATTCTACTTCTCCCAATGGCTTTCAGCTCTACAGACTCTTCTTCCCCATTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS-3UTR CAA 90 bp | CAGGCACAAGCTGTTAGTTTGAATGATAAAGAGCAGTGGATACAAAGTCATTGGTCCACGGTGGTGACATaGAACACGACTCCTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: QAQAVSLNDKEQWIQSHWSTVVT*NTTPFS Trigger: GCTGAAAGGAGTCGTGTTCAATGTCACCACCGTGGA...CCAATGACTTTGTATCCACTGCTCTTTATCATTCAAACTAACAGCTTGTGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024755.7 |
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| CDS-3UTR CAA 90 bp | GCCATTGGGAGAAGTAGAATTCTTCTGCAGCAGAAATTGGGCCAGACAGCCAAGGGCAGCATTGTTCTGTaGTTTGGTGTTTTTGATGTA | + |
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Preference number: 5 (lower is better) Translates to: AIGRSRILLQQKLGQTAKGSIVL*FGVFDV Trigger: TACATCAAAAACACCAAACAACAGAACAATGCTGCC...CTTGGCTGTCTGGCCCAATTTCTGCTGCAGAAGAATTCTACTTCTCCCAATGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS CAA 90 bp | CTCCATTCTCCTGAGGTTCCCAGGAGAGAGGCTCTGGGTCCTGGCTaGGTGAATGTGAGTCTCCCATGGAGACATCCCGAACCGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: LHSPEVPRREALGPG*VNVSLPWRHPEPPG Trigger: CCCGGGCGGTTCGGGATGTCTCCATGGGAGACTCACATTCACCAAGCCAGGACCCAGAGCCTCTCTCCTGGGAACCTCAGGAGAATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS TCA 72 bp | GAAGGCACATCTTCCTCGGTTGCTCCTCCATTCTCCTaGGGTTCCCACGGGAGACGCTCCGGGTCCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: EGTSSSVAPPFS*GSHGRRSGSWL Trigger: AAGCCAGGACCCGGAGCGTCTCCCGTGGGAACCTCAGGAGAATGGAGGAGCAACCGAGGAAGATGTGCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS TCA 72 bp | GAAGGCACGTCTTCCTCGGTTGCTCCTCCATTCTCCTaGGGTTCCCAGGAGAGAGGCTCTGGGTCCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: EGTSSSVAPPFS*GSQERGSGSWL Trigger: AAGCCAGGACCCAGAGCCTCTCTCCTGGGAACCTCAGGAGAATGGAGGAGCAACCGAGGAAGACGTGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CCA 72 bp | ACTTGCGCTGGGACCCCTTCTCGTCCCCGTGGGTGTTaGTGTCAATCTCCTCTGGCAGAGGGCTGTTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: TCAGTPSRPRGC*CQSPLAEGCLG Trigger: ACCTAAACAGCCCTCTGCCAGAGGAGATTGACACCAACACCCACGGGGACGAGAAGGGGTCCCAGCGCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS CCA 72 bp | GCTCTGGGTCCTGGCTTGGTGAATGTGAGTCTCCCATaGAGACATCCCGAACCGCCCGGGACTCTGAAAACA | + |
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Preference number: 6 (lower is better) Translates to: ALGPGLVNVSLP*RHPEPPGTLKT Trigger: TGTTTTCAGAGTCCCGGGCGGTTCGGGATGTCTCCATGGGAGACTCACATTCACCAAGCCAGGACCCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CAA 72 bp | CCTGAGGTTCCCAGGAGAGAGGCTCTGGGTCCTGGCTaGGTGAATGTGAGTCTCCCATGGAGACATCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: PEVPRREALGPG*VNVSLPWRHPE Trigger: TTCGGGATGTCTCCATGGGAGACTCACATTCACCAAGCCAGGACCCAGAGCCTCTCTCCTGGGAACCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS GCA 72 bp | GACATCTGCGTAGGCCAACTCGATCTCACTGTCAGCTaGACAGGTGTTGGTGAACTCGTCCCGTGCATAGGC | + |
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Preference number: 6 (lower is better) Translates to: DICVGQLDLTVS*TGVGELVPCIG Trigger: GCCTATGCACGGGACGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCAGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS TCA 72 bp | GAGGAATCCTGGCTTGTGGCAAGCACCTTGCTGTGCTaGACCCTGAAGCTCAGTAAGGAAGGCACGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: EESWLVASTLLC*TLKLSKEGTSS Trigger: GGAAGACGTGCCTTCCTTACTGAGCTTCAGGGTTCAGCACAGCAAGGTGCTTGCCACAAGCCAGGATTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CCA 72 bp | GGTAGCCATCTGCTTCTGGCTCCAGGGAGGCTGGGGTaGCTTCATCACTTTTCGAGACATACGGTGACAAGT | + |
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Preference number: 6 (lower is better) Translates to: GSHLLLAPGRLG*LHHFSRHTVTS Trigger: ACTTGTCACCGTATGTCTCGAAAAGTGATGAAGCCACCCCAGCCTCCCTGGAGCCAGAAGCAGATGGCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CAA 72 bp | TCTTCAATCTTGTTGACATCTGTCTTCACATCCCCATaGAAGGTCAGGAAGGGCGGGTGCGTGCCAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSILLTSVFTSP*KVRKGGCVPGA Trigger: GGCTCCTGGCACGCACCCGCCCTTCCTGACCTTCAATGGGGATGTGAAGACAGATGTCAACAAGATTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS GCA 72 bp | TGGACTCTGTCATACAAAGGAGCGTCACTTTCCTCCTaGAGGTCTGGAGCCTCATCTGTGCTCCTCTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: WTLSYKGASLSS*RSGASSVLLFW Trigger: CCAAAAGAGGAGCACAGATGAGGCTCCAGACCTGCAGGAGGAAAGTGACGCTCCTTTGTATGACAGAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CAA 90 bp | TACTTCTCGGGGGTTAGGGTCTCCTCCAGGAACTCTTCAATCTTGTaGACATCTGTCTTCACATCCCCATTGAAGGTCAGGAAGGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: YFSGVRVSSRNSSIL*TSVFTSPLKVRKGG Trigger: CCCGCCCTTCCTGACCTTCAATGGGGATGTGAAGACAGATGTCAACAAGATTGAAGAGTTCCTGGAGGAGACCCTAACCCCCGAGAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS CAA 90 bp | CTTTCCCCGTCGATCCCAGCCTTCACAAACAGGAAGATCTCAGGGTaGCTGGAAGCTGCTTCTTTTTCTCCCAACCCAATAGCAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LSPSIPAFTNRKISG*LEAASFSPNPIAAE Trigger: TTCTGCTGCTATTGGGTTGGGAGAAAAAGAAGCAGCTTCCAGCAACCCTGAGATCTTCCTGTTTGTGAAGGCTGGGATCGACGGGGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CCA 72 bp | GTCATACAAAGGAGCGTCACTTTCCTCCTGCAGGTCTaGAGCCTCATCTGTGCTCCTCTTTTGGATTTTATC | + |
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Preference number: 6 (lower is better) Translates to: VIQRSVTFLLQV*SLICAPLLDFI Trigger: GATAAAATCCAAAAGAGGAGCACAGATGAGGCTCCAGACCTGCAGGAGGAAAGTGACGCTCCTTTGTATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CCA 72 bp | ATTCTTGAGGTATCGCCACAAGCCTGTCATCTCAGCTaGGATGTCATAGTTTCGGTACTTCTTAGCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: ILEVSPQACHLS*DVIVSVLLSHN Trigger: ATTGTGGCTAAGAAGTACCGAAACTATGACATCCCAGCTGAGATGACAGGCTTGTGGCGATACCTCAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024755.7 ENSMUST00000239215.2 |
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| CDS CCA 72 bp | GTGACAAGTATTCGTACTCCTGGCTTTCTAGCCTGGTaGCATACAGATCATTTTCAGAGTCTTCATGGACTC | + |
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Preference number: 6 (lower is better) Translates to: VTSIRTPGFLAW*HTDHFQSLHGL Trigger: GAGTCCATGAAGACTCTGAAAATGATCTGTATGCCACCAGGCTAGAAAGCCAGGAGTACGAATACTTGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CCA 72 bp | ACGGTGACAAGTATTCGTACTCCTGGCTTTCTAGCCTaGTGGCATACAGATCATTTTCAGAGTCTTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: TVTSIRTPGFLA*WHTDHFQSLHG Trigger: TCCATGAAGACTCTGAAAATGATCTGTATGCCACCAGGCTAGAAAGCCAGGAGTACGAATACTTGTCACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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| CDS CCA 72 bp | CTTTTCGAGACATACGGTGACAAGTATTCGTACTCCTaGCTTTCTAGCCTGGTGGCATACAGATCATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LFETYGDKYSYS*LSSLVAYRSFS Trigger: TGAAAATGATCTGTATGCCACCAGGCTAGAAAGCCAGGAGTACGAATACTTGTCACCGTATGTCTCGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239215.2 |
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