Pregenerated sensors for CLEC9A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046080Ensembl transcript IDs: ENSMUST00000058352.15, ENSMUST00000088075.8, ENSMUST00000164513.8, ENSMUST00000204860.3
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAAGGGAAGCCTTTTGGCAAATTGCCCAAGGCCCAGCCTGTCCTaGAGTTCTCATTTGGGCCAGAGAGGGAGCACTTCCAACCATGAA | + |
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Preference number: 1 (lower is better) Translates to: SKGSLLANCPRPSLS*SSHLGQRGSTSNHE Trigger: TTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAATTTGCCAAAAGGCTTCCCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 90 bp | GAAGACTGTGGCCAACCAGGAAGGAGAAACACGGGCTTGGAGACCTaGAAGAGTGCCAAGCAGCTGCAGTCTTTGGAACCAAGGATCACA | + |
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Preference number: 1 (lower is better) Translates to: EDCGQPGRRNTGLET*KSAKQLQSLEPRIT Trigger: TGTGATCCTTGGTTCCAAAGACTGCAGCTGCTTGGCACTCTTCCAGGTCTCCAAGCCCGTGTTTCTCCTTCCTGGTTGGCCACAGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR GCA 90 bp | TGGCCAACCAGGAAGGAGAAACACGGGCTTGGAGACCTGGAAGAGTaGCAAGCAGCTGCAGTCTTTGGAACCAAGGATCACAGAAAACCT | + |
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Preference number: 1 (lower is better) Translates to: WPTRKEKHGLGDLEE*QAAAVFGTKDHRKP Trigger: AGGTTTTCTGTGATCCTTGGTTCCAAAGACTGCAGCTGCTTGGCACTCTTCCAGGTCTCCAAGCCCGTGTTTCTCCTTCCTGGTTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 90 bp | CTAACATCTGGCCAGACTGCCCTCATGACAGTCCAGCCAGCAGTTTaGGCACTTTACTCTGAAGCCCCTCTAGCTACTGAAGAATACCAC | + |
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Preference number: 1 (lower is better) Translates to: LTSGQTALMTVQPAV*ALYSEAPLATEEYH Trigger: GTGGTATTCTTCAGTAGCTAGAGGGGCTTCAGAGTAAAGTGCCCAAACTGCTGGCTGGACTGTCATGAGGGCAGTCTGGCCAGATGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 90 bp | ATGAGAGAAGGCAGAAAAGCAAGGCTGAGTAAAGACAGAAGACTGTaGCCAACCAGGAAGGAGAAACACGGGCTTGGAGACCTGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: MREGRKARLSKDRRL*PTRKEKHGLGDLEE Trigger: CTCTTCCAGGTCTCCAAGCCCGTGTTTCTCCTTCCTGGTTGGCCACAGTCTTCTGTCTTTACTCAGCCTTGCTTTTCTGCCTTCTCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 90 bp | AACGTGAATTCAAGCTATCAGCCAAGCAGCCTTTTTACTAACATCTaGCCAGACTGCCCTCATGACAGTCCAGCCAGCAGTTTGGGCACT | + |
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Preference number: 1 (lower is better) Translates to: NVNSSYQPSSLFTNI*PDCPHDSPASSLGT Trigger: AGTGCCCAAACTGCTGGCTGGACTGTCATGAGGGCAGTCTGGCCAGATGTTAGTAAAAAGGCTGCTTGGCTGATAGCTTGAATTCACGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 90 bp | AGTCGACAGACAAGAGAACACCTGAAAAATTCCAGAGATGGGTCATaGCAGAAAGGATGGGCAGCAGAAACAGAGAGACTGAGGAATGGT | + |
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Preference number: 1 (lower is better) Translates to: SRQTREHLKNSRDGS*QKGWAAETERLRNG Trigger: ACCATTCCTCAGTCTCTCTGTTTCTGCTGCCCATCCTTTCTGCCATGACCCATCTCTGGAATTTTTCAGGTGTTCTCTTGTCTGTCGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR TCA 90 bp | AATGGTCCTTTTTCTCCTCCTTTGCCCTGCATTAGAAGAGTAGCCTaGGCTGCTAACACAAAGAGAAGATGCAGAAGCACAAGATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: NGPFSPPLPCIRRVA*AANTKRRCRSTRWE Trigger: CTCCCATCTTGTGCTTCTGCATCTTCTCTTTGTGTTAGCAGCTCAGGCTACTCTTCTAATGCAGGGCAAAGGAGGAGAAAAAGGACCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 90 bp | CTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTaGCCTCTTTCAAACACTTGTGTAACAGGTAGCTTTGAGTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: LAFIVSHQSPPVFAL*PLSNTCVTGSFELY Trigger: ATACAACTCAAAGCTACCTGTTACACAAGTGTTTGAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACAAAAGACTTCCCGAATaGTCCTTTTTCTCCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: LPKAQPVLQFSFGPEREHKRLPE*SFFSSF Trigger: AAAGGAGGAGAAAAAGGACCATTCGGGAAGTCTTTT...GTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR TCA 90 bp | GCAAATTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGCAGTGTGTGATCTTATaGTCTATAATTACTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ANCPRPSLSCSSHLGQRGQCVIL*SIITGR Trigger: CCTTCCAGTAATTATAGATCATAAGATCACACACTG...CCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACTTCCAACCATGAAAGCAGCTGCAGTCTTTaGAACCAAGGATCACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLSCSSHLGQRGSTSNHESSCSL*NQGSQK Trigger: TTTCTGTGATCCTTGGTTCCAAAGACTGCAGCTGCT...TTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTGACAGCAGTTACCGTGGCAGTCGACAGACAAGAGAACACCTGAAAAATTCCAGAGATGGGTCATaGCAGAAAGGATGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SGDSSYRGSRQTREHLKNSRDGS*QKGWAA Trigger: TGCTGCCCATCCTTTCTGCCATGACCCATCTCTGGA...ATTTTTCAGGTGTTCTCTTGTCTGTCGACTGCCACGGTAACTGCTGTCACCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR GCA 90 bp | TCTAGACCAGAGGACTGTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCTGGAGGTCCCCATTCTaGTCATTTTTACCTAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SRPEDCNSSHCRVNAPPPWRSPF*SFLPRA Trigger: GGCTCTAGGTAAAAATGAGCAGAATGGGGACCTCCA...GGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTACAGTCCTCTGGTCTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR GCA 90 bp | TCTAGACCAGAGGACTGTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCCTTGCTGCTACTGACTaGTGTCTGGTATTGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: SRPEDCNSSHCRVNAPPPLAATD*CLVLLL Trigger: TAGCAGCAATACCAGACAGCAGTCAGTAGCAGCAAG...GGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTACAGTCCTCTGGTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR GCA 90 bp | GACCAGAGGACTGTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCTAAAAACACTAGTGGGAGCTaGTTGCTGCTACTGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: DQRTVIVVTAELMPHHPKNTSGS*LLLLTA Trigger: AGCAGTCAGTAGCAGCAAGCAGCTCCCACTAGTGTT...TTTAGGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTACAGTCCTCTGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACTTCCAACCATGAAGTACAAACCAAGGATTaGATAAAAACTCCCACAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLSCSSHLGQRGSTSNHEVQTKD*IKTPTR Trigger: CCTTGTGGGAGTTTTTATGCAATCCTTGGTTTGTAC...TTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CCA 90 bp | GTATTACAGTTTTATAGCAGGAAGGTTGAGACACAGGCAGTTAGAGGAACTAGGGGAGAAACACGGGCTTaGAGACCTGGAAGAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VLQFYSRKVETQAVRGTRGETRA*RPGRVP Trigger: TGGCACTCTTCCAGGTCTCCAAGCCCGTGTTTCTCC...CCTAGTTCCTCTAACTGCCTGTGTCTCAACCTTCCTGCTATAAAACTGTAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR TCA 90 bp | ATAGGATGGAAGGCTCCACCTACACAATGGGACATGCTGATGTCCATGCTAATCCAGAAACAGAGAGACTaGGGAATGGTAGAGTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: IGWKAPPTQWDMLMSMLIQKQRD*GMVELE Trigger: CTCTAACTCTACCATTCCTCAGTCTCTCTGTTTCTG...GATTAGCATGGACATCAGCATGTCCCATTGTGTAGGTGGAGCCTTCCATCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CCA 90 bp | GTATTACAGTTTTATAGCAGGAAGGTTGAGACACAGGCAGTTAGAGGAACTAGGCCTGCAGTTCTCATTTaGGCCAGAGAGGGAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: VLQFYSRKVETQAVRGTRPAVLI*AREGAL Trigger: AAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGG...CCTAGTTCCTCTAACTGCCTGTGTCTCAACCTTCCTGCTATAAAACTGTAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CAA 90 bp | TTTTATAGCAGGAAGGTTGAGACACAGGCAGTTAGAGGAACTAGGTaGTTCATCTTGTTCATCTTGTCAGCGCAGACTGAGCCGTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: FYSRKVETQAVRGTR*FILFILSAQTEPFD Trigger: ATCAAACGGCTCAGTCTGCGCTGACAAGATGAACAAGATGAACAACCTAGTTCCTCTAACTGCCTGTGTCTCAACCTTCCTGCTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR TCA 90 bp | AGATTCCTGCATTCTAGACCAGAGGACTGTAATAGTAGTCACTGCAGAGTTAATAAATCTCTATATCTGTaGGGTCATCCCCCAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: RFLHSRPEDCNSSHCRVNKSLYL*GHPPGP Trigger: AGGGCCTGGGGGATGACCTCACAGATATAGAGATTT...ATTAACTCTGCAGTGACTACTATTACAGTCCTCTGGTCTAGAATGCAGGAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CCA 90 bp | TCCATCTCTCTCCTCTCAGTGTGTGATCTTATGATCTATAATTACTGGAAGGTGCCTGTGTTTGCTCTTTaGCCTCTTTCAAACACTTGT | + |
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Preference number: 2 (lower is better) Translates to: SISLLSVCDLMIYNYWKVPVFAL*PLSNTC Trigger: ACAAGTGTTTGAAAGAGGCCAAAGAGCAAACACAGG...CACCTTCCAGTAATTATAGATCATAAGATCACACACTGAGAGGAGAGAGATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 72 bp | GGCCAACCAGGAAGGAGAAACACGGGCTTGGAGACCTaGAAGAGTGCCAAGCAGCTGCAGTCTTTGGAACCA | + |
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Preference number: 3 (lower is better) Translates to: GQPGRRNTGLET*KSAKQLQSLEP Trigger: TGGTTCCAAAGACTGCAGCTGCTTGGCACTCTTCCAGGTCTCCAAGCCCGTGTTTCTCCTTCCTGGTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 72 bp | ATTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTaGGCCAGAGAGGGAGCACTTCCAACCATGAACCTA | + |
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Preference number: 3 (lower is better) Translates to: IAQGPACPAVLI*AREGALPTMNL Trigger: TAGGTTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CAA 90 bp | TTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACTCCTGTGTTTGCTCTTaGGCCTCTTTCAAACACTTG | + |
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Preference number: 3 (lower is better) Translates to: LPKAQPVLQFSFGPEREHSCVCS*ASFKHL Trigger: CAAGTGTTTGAAAGAGGCCAAAGAGCAAACACAGGA...GTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CAA 90 bp | GCAAATTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAAGCAGCTGCAGTCTTaGGAACCAAGGATCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: ANCPRPSLSCSSHLGQRGKQLQS*EPRITE Trigger: TTCTGTGATCCTTGGTTCCAAAGACTGCAGCTGCTT...CCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAATTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR GCA 72 bp | AGGAAGGAGAAACACGGGCTTGGAGACCTGGAAGAGTaGCAAGCAGCTGCAGTCTTTGGAACCAAGGATCAC | + |
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Preference number: 3 (lower is better) Translates to: RKEKHGLGDLEE*QAAAVFGTKDH Trigger: GTGATCCTTGGTTCCAAAGACTGCAGCTGCTTGGCACTCTTCCAGGTCTCCAAGCCCGTGTTTCTCCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR GCA 72 bp | CAGCCAAGCAGCCTTTTTACTAACATCTGGCCAGACTaGCCTCATGACAGTCCAGCCAGCAGTTTGGGCACT | + |
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Preference number: 3 (lower is better) Translates to: QPSSLFTNIWPD*PHDSPASSLGT Trigger: AGTGCCCAAACTGCTGGCTGGACTGTCATGAGGGCAGTCTGGCCAGATGTTAGTAAAAAGGCTGCTTGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CAA 90 bp | GCAAATTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGCCTTTTTCTCCTCCTTaGCCCTGCATTAGAAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: ANCPRPSLSCSSHLGQRGPFSPP*PCIRRV Trigger: TACTCTTCTAATGCAGGGCAAAGGAGGAGAAAAAGG...CCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAATTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CAA 90 bp | AGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACTTCCAACCATGAAGACTGCTGTCTGGTATaGCTGCTAAAGGTTAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: SLSCSSHLGQRGSTSNHEDCCLV*LLKVRD Trigger: ATCCCTAACCTTTAGCAGCAATACCAGACAGCAGTC...TTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR TCA 72 bp | GCTCCAAGGGTTAGAAACTGTAAATCTCTATATCTGTaGGGTCATCCCCCAGGCCCTGGGCCTCAGAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: APRVRNCKSLYL*GHPPGPGPQKK Trigger: CTTCTTCTGAGGCCCAGGGCCTGGGGGATGACCTCACAGATATAGAGATTTACAGTTTCTAACCCTTGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR TCA 72 bp | CCCTGGTTCCTTCTGAGGCAGATCAGAGGGACTCAATaGCTCTACAGCTTTGGGGCAGAAGTTAAACCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PWFLLRQIRGTQ*LYSFGAEVKPC Trigger: ACAGGGTTTAACTTCTGCCCCAAAGCTGTAGAGTCATTGAGTCCCTCTGATCTGCCTCAGAAGGAACCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR GCA 72 bp | ACACGGGCTTGGAGACCTGGAAGAGTGCCAAGCAGCTaGAGTCTTTGGAACCAAGGATCACAGAAAACCTAT | + |
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Preference number: 3 (lower is better) Translates to: TRAWRPGRVPSS*SLWNQGSQKTY Trigger: ATAGGTTTTCTGTGATCCTTGGTTCCAAAGACTGCAGCTGCTTGGCACTCTTCCAGGTCTCCAAGCCCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR GCA 72 bp | CTACTGAAGAATACCACCACCCCATGGCTGAAGACATaGTCCAGTTGTGACTGCTCCCACAACTGGAATAGC | + |
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Preference number: 3 (lower is better) Translates to: LLKNTTTPWLKT*SSCDCSHNWNS Trigger: GCTATTCCAGTTGTGGGAGCAGTCACAACTGGAGCATGTCTTCAGCCATGGGGTGGTGGTATTCTTCAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 72 bp | TCAAGCTATCAGCCAAGCAGCCTTTTTACTAACATCTaGCCAGACTGCCCTCATGACAGTCCAGCCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: SSYQPSSLFTNI*PDCPHDSPASS Trigger: ACTGCTGGCTGGACTGTCATGAGGGCAGTCTGGCCAGATGTTAGTAAAAAGGCTGCTTGGCTGATAGCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR TCA 72 bp | AAGAGTCTGTGCTGTGATTGGTGCAAACACAGTCCTTaGAGAGCTACTGTGAAGGTGCAGACACCCGCACTA | + |
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Preference number: 3 (lower is better) Translates to: KSLCCDWCKHSP*RATVKVQTPAL Trigger: TAGTGCGGGTGTCTGCACCTTCACAGTAGCTCTTCAAGGACTGTGTTTGCACCAATCACAGCACAGACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR TCA 72 bp | TTCATCTTGTCAGCGCAGACTGAGCCGTTTGATCTGTaGGCAATAGGATGGAAGGCTCCACCTACACAATGG | + |
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Preference number: 3 (lower is better) Translates to: FILSAQTEPFDL*AIGWKAPPTQW Trigger: CCATTGTGTAGGTGGAGCCTTCCATCCTATTGCTCACAGATCAAACGGCTCAGTCTGCGCTGACAAGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 72 bp | GCTGCTAACACAAAGAGAAGATGCAGAAGCACAAGATaGGAGCAAAGGCAACCAAGCAGAGCAAGCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: AANTKRRCRSTR*EQRQPSRASSS Trigger: AGAGCTGCTTGCTCTGCTTGGTTGCCTTTGCTCCCATCTTGTGCTTCTGCATCTTCTCTTTGTGTTAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CAA 90 bp | TGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACTTCCAACCATGAACCTAAATCTCCTCCTGTGTTaGCTCTTTGGCCTCTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: CPAVLIWAREGALPTMNLNLLLC*LFGLFQ Trigger: TTGAAAGAGGCCAAAGAGCAAACACAGGAGGAGATT...TAGGTTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR TCA 72 bp | AAAAGCACCATAGACAGAAAAAGCCCTGGTTCCTTCTaGGGCAGATCAGAGGGACTCAATGACTCTACAGCT | + |
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Preference number: 3 (lower is better) Translates to: KSTIDRKSPGSF*GRSEGLNDSTA Trigger: AGCTGTAGAGTCATTGAGTCCCTCTGATCTGCCTCAGAAGGAACCAGGGCTTTTTCTGTCTATGGTGCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 72 bp | ACAAGAGAACACCTGAAAAATTCCAGAGATGGGTCATaGCAGAAAGGATGGGCAGCAGAAACAGAGAGACTG | + |
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Preference number: 3 (lower is better) Translates to: TREHLKNSRDGS*QKGWAAETERL Trigger: CAGTCTCTCTGTTTCTGCTGCCCATCCTTTCTGCCATGACCCATCTCTGGAATTTTTCAGGTGTTCTCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR TCA 72 bp | TTTTCTCCTCCTTTGCCCTGCATTAGAAGAGTAGCCTaGGCTGCTAACACAAAGAGAAGATGCAGAAGCACA | + |
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Preference number: 3 (lower is better) Translates to: FSPPLPCIRRVA*AANTKRRCRST Trigger: TGTGCTTCTGCATCTTCTCTTTGTGTTAGCAGCTCAGGCTACTCTTCTAATGCAGGGCAAAGGAGGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR TCA 72 bp | GGGAAGATCTGTGACTGTAAACAAGAGTCTGTGCTGTaGTTGGTGCAAACACAGTCCTTGAAGAGCTACTGT | + |
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Preference number: 3 (lower is better) Translates to: GKICDCKQESVL*LVQTQSLKSYC Trigger: ACAGTAGCTCTTCAAGGACTGTGTTTGCACCAATCACAGCACAGACTCTTGTTTACAGTCACAGATCTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR-3UTR CAA 90 bp | AGGACTGTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCTAAAGCCATCAGTACAAACCAAGGATaGCATAAAAACTCCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: RTVIVVTAELMPHHPKAISTNQG*HKNSHK Trigger: CTTGTGGGAGTTTTTATGCAATCCTTGGTTTGTACT...GATGGCTTTAGGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTACAGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR GCA 72 bp | CTGGTATTGCTGCTAAAGGTTAGGGATTGTAAAAGCTaGCAAGACCCAGAGCCAGTAGTGATTAAAACGAAA | + |
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Preference number: 3 (lower is better) Translates to: LVLLLKVRDCKS*QDPEPVVIKTK Trigger: TTTCGTTTTAATCACTACTGGCTCTGGGTCTTGGCAGCTTTTACAATCCCTAACCTTTAGCAGCAATACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR GCA 72 bp | CATGAAATTCAAAGAGTACCTTTCCCAGCAGAACTCTaGAGTCTGAAAAGCACCATAGACAGAAAAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: HEIQRVPFPAEL*SLKSTIDRKSP Trigger: AGGGCTTTTTCTGTCTATGGTGCTTTTCAGACTGCAGAGTTCTGCTGGGAAAGGTACTCTTTGAATTTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| 3UTR CCA 72 bp | ATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTaGCCTCTTTCAAACACTTGTGTAACAGGTAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: IVSHQSPPVFAL*PLSNTCVTGSF Trigger: AAAGCTACCTGTTACACAAGTGTTTGAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
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| CDS-3UTR TCA 90 bp | TTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACGGGGATTGGCACTTCTaGGAGGCCTCTGAGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPKAQPVLQFSFGPEREHGDWHF*EASEVG Trigger: TCCTACCTCAGAGGCCTCTCAGAAGTGCCAATCCCC...GTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| 3UTR CAA 72 bp | AATTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTaGGGCCAGAGAGGGAGCACTTCCAACCATGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: NCPRPSLSCSSH*GQRGSTSNHEP Trigger: AGGTTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR TCA 90 bp | TTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACATACCTGGAAGAACTTaGTGCCCAAGAAAATGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LPKAQPVLQFSFGPEREHIPGRT*CPRKWT Trigger: CGTCCATTTTCTTGGGCATCAAGTTCTTCCAGGTAT...GTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR GCA 90 bp | TTGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACATGAGTCTTTCCTGCTaGTCCAAGACAAGAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPKAQPVLQFSFGPEREHMSLSC*SKTRED Trigger: ATCCTCTCTTGTCTTGGAGCAGCAGGAAAGACTCAT...GTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR TCA 90 bp | TGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTTCGGGGATTGGCACTTCTaGGAGGCCTCTGAGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLHSLTSISSCVCSLASFGDWHF*EASEVG Trigger: TCCTACCTCAGAGGCCTCTCAGAAGTGCCAATCCCC...GAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCCTGTGTCCTGTTGGATaGGTCTTTCCTGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QACLHSLTSISSCVCSLALCPVG*VFPAAP Trigger: TGGAGCAGCAGGAAAGACTCATCCAACAGGACACAG...GGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| 3UTR CAA 72 bp | AGCACTCTAACTAAGCAAGGGAAGCCTTTTGGCAAATaGCCCAAGGCCCAGCCTGTCCTGCAGTTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: STLTKQGKPFGK*PKAQPVLQFSF Trigger: AAATGAGAACTGCAGGACAGGCTGGGCCTTGGGCAATTTGCCAAAAGGCTTCCCTTGCTTAGTTAGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR TCA 90 bp | TGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTTCCTGTGTCCTGTTGGATaGGTCTTTCCTGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHSLTSISSCVCSLASFLCPVG*VFPAAP Trigger: TGGAGCAGCAGGAAAGACTCATCCAACAGGACACAG...GAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACTTCCAACCATGAACCTAAGTGTGTATTTCCTCTaGCACTGTGTAAGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CPAVLIWAREGALPTMNLSVYFL*HCVRFT Trigger: GGTGAACCTTACACAGTGGCAGAGGAAATACACACT...TAGGTTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCCTGAATCCAGTTGTGTaGACAAGGGCTGCAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QACLHSLTSISSCVCSLALNPVV*TRAAVT Trigger: AGTGACTGCAGCCCTTGTCCACACAACTGGATTCAG...GGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| 3UTR CAA 72 bp | TGGGAGCTGCTTGCTGCTACTGACTGCTGTCTGGTATaGCTGCTAAAGGTTAGGGATTGTAAAAGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WELLAATDCCLV*LLKVRDCKSCQ Trigger: TTGGCAGCTTTTACAATCCCTAACCTTTAGCAGCAATACCAGACAGCAGTCAGTAGCAGCAAGCAGCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCGCATCTGTGCCTGAATaGAGAGATCTCTGCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QACLHSLTSISSCVCSLAASVPE*RDLCSK Trigger: CTTACTGCAGAGATCTCTCCATTCAGGCACAGATGC...GGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGTACCTTTCCCAGCAGAACTCTGCAGTCTGAAAAGCACCATAGACAGACTGTGGAACCATCTGTaGAGAGGTCAGAAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRVPFPAELCSLKSTIDRLWNHL*RGQKNW Trigger: CCAGTTCTTCTGACCTCTCCACAGATGGTTCCACAG...TCTGTCTATGGTGCTTTTCAGACTGCAGAGTTCTGCTGGGAAAGGTACTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR TCA 90 bp | CTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTAACACACCATGCTCCTaGACATTTGCTAGGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: LAFIVSHQSPPVFALWPLNTPCS*TFARGL Trigger: CAATCCCCTAGCAAATGTTCAGGAGCATGGTGTGTT...AAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTTCAACACACCATGCTCCTaGACATTTGCTAGGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: CLHSLTSISSCVCSLASFNTPCS*TFARGL Trigger: CAATCCCCTAGCAAATGTTCAGGAGCATGGTGTGTT...GAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGATGGAAGGCTCCACCTACACAATGGGACATGCTGATGTCCATGCTAATCAACAGCTCTTCTTACTaGTGTTCCACATTTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IGWKAPPTQWDMLMSMLINSSSY*CSTFPS Trigger: GCTGGGAAATGTGGAACATCAGTAAGAAGAGCTGTT...GATTAGCATGGACATCAGCATGTCCCATTGTGTAGGTGGAGCCTTCCATCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR TCA 90 bp | AGTGGTGACAGCAGTTACCGTGGCAGTCGACAGACAAGAGAACACCTGAAAAATCCACTGATTCCATCTTaGAACACTCCCACCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SGDSSYRGSRQTREHLKNPLIPS*NTPTQY Trigger: ATATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGG...ATTTTTCAGGTGTTCTCTTGTCTGTCGACTGCCACGGTAACTGCTGTCACCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| 3UTR CAA 72 bp | GAGACACAGGCAGTTAGAGGAACTAGGTTGTTCATCTaGTTCATCTTGTCAGCGCAGACTGAGCCGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ETQAVRGTRLFI*FILSAQTEPFD Trigger: ATCAAACGGCTCAGTCTGCGCTGACAAGATGAACAAGATGAACAACCTAGTTCCTCTAACTGCCTGTGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| 3UTR CAA 72 bp | AGGAAGGTTGAGACACAGGCAGTTAGAGGAACTAGGTaGTTCATCTTGTTCATCTTGTCAGCGCAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKVETQAVRGTR*FILFILSAQTE Trigger: CTCAGTCTGCGCTGACAAGATGAACAAGATGAACAACCTAGTTCCTCTAACTGCCTGTGTCTCAACCTTCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR TCA 90 bp | CTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTAACAGCTCTTCTTACTaGTGTTCCACATTTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAFIVSHQSPPVFALWPLNSSSY*CSTFPS Trigger: GCTGGGAAATGTGGAACATCAGTAAGAAGAGCTGTT...AAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTTCCCACTGATTCCATCTTaGAACACTCCCACCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: CLHSLTSISSCVCSLASFPLIPS*NTPTQY Trigger: ATATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGG...GAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTGTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCTAAAGCCATCAGAACCAAGATCCACTaGTTCCATCTTGAAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: RTVIVVTAELMPHHPKAIRTKIH*FHLETL Trigger: GAGTGTTTCAAGATGGAATCAGTGGATCTTGGTTCT...GATGGCTTTAGGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTACAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTTCATGAGTCTTTCCTGCTaGTCCAAGACAAGAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLHSLTSISSCVCSLASFMSLSC*SKTRED Trigger: ATCCTCTCTTGTCTTGGAGCAGCAGGAAAGACTCAT...GAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTGAATGGAGAGATCTCTaGAGTAAGGCTTGGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LAFIVSHQSPPVFALWPLEWRDL*SKAWQY Trigger: ATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTC...AAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR TCA 90 bp | AGATTCCTGCATTCTAGACCAGAGGACTGTAATAGTAGTCACTGCAGAGTTAATAGAAGCATCTGTGCCTaGATGGAGAGATCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RFLHSRPEDCNSSHCRVNRSICA*MERSLQ Trigger: CTGCAGAGATCTCTCCATTCAGGCACAGATGCTTCT...ATTAACTCTGCAGTGACTACTATTACAGTCCTCTGGTCTAGAATGCAGGAATCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR TCA 90 bp | TGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTTCAGAACCAAGATCCACTaGTTCCATCTTGAAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: CLHSLTSISSCVCSLASFRTKIH*FHLETL Trigger: GAGTGTTTCAAGATGGAATCAGTGGATCTTGGTTCT...GAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCTCTTTGGCCTCTTTCAAACACTTGTGTAACAGGTAGCTTTGAGTTGTATGCTGCAGTCACTACCTaGATGGAGAGATCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FALWPLSNTCVTGSFELYAAVTT*MERSLQ Trigger: CTGCAGAGATCTCTCCATTCAGGTAGTGACTGCAGC...ATACAACTCAAAGCTACCTGTTACACAAGTGTTTGAAAGAGGCCAAAGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088075.8 |
||
| CDS-3UTR CCA 90 bp | TCCATCTCTCTCCTCTCAGTGTGTGATCTTATGATCTATAATTACTGGAAGGTGCTGAATCCAGTTGTGTaGACAAGGGCTGCAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SISLLSVCDLMIYNYWKVLNPVV*TRAAVT Trigger: AGTGACTGCAGCCCTTGTCCACACAACTGGATTCAG...CACCTTCCAGTAATTATAGATCATAAGATCACACACTGAGAGGAGAGAGATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCTTTCGATGCAGGATCCAAATaGCTTCTTCTCACAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLHSLTSISSCVCSLASFDAGSK*LLLTDK Trigger: TTTATCTGTGAGAAGAAGGCATTTGGATCCTGCATC...GAAAGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCTTTGGCCTCTTTCAAACACTTGTGTAACAGGTAGCTTTGAGTTGTATAGTGTGTATTTCCTCTaGCACTGTGTAAGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: FALWPLSNTCVTGSFELYSVYFL*HCVRFT Trigger: GGTGAACCTTACACAGTGGCAGAGGAAATACACACT...ATACAACTCAAAGCTACCTGTTACACAAGTGTTTGAAAGAGGCCAAAGAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCTTTGGCCTCTTTCAAACACTTGTGTAACAGGTAGCTTTGAGTTGTATCAGTCACTACCTGAATaGAGAGATCTCTGCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FALWPLSNTCVTGSFELYQSLPE*RDLCSK Trigger: CTTACTGCAGAGATCTCTCCATTCAGGTAGTGACTG...ATACAACTCAAAGCTACCTGTTACACAAGTGTTTGAAAGAGGCCAAAGAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088075.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCTTTGGCCTCTTTCAAACACTTGTGTAACAGGTAGCTTTGAGTTGTATGATGCAGGATCCAAATaGCTTCTTCTCACAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FALWPLSNTCVTGSFELYDAGSK*LLLTDK Trigger: TTTATCTGTGAGAAGAAGGCATTTGGATCCTGCATC...ATACAACTCAAAGCTACCTGTTACACAAGTGTTTGAAAGAGGCCAAAGAGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS CCA 90 bp | GGGCTGCAGTCACTACCTGAATGGAGAGATCTCTGCAGTAAGGCTTaGCAGTATTCCAGTGTGTATTTCCTCTGCCACTGTGTAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLQSLPEWRDLCSKA*QYSSVYFLCHCVRF Trigger: GAACCTTACACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGTAGTGACTGCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088075.8 |
||
| CDS-3UTR CAA 90 bp | GTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCTAAAGCCATCCAAGAGTCACTACCTGTTTCCTaGCTGTCCAGGGTCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VIVVTAELMPHHPKAIQESLPVS*LSRVCG Trigger: TCCACAGACCCTGGACAGCAAGGAAACAGGTAGTGA...CTCTTGGATGGCTTTAGGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR CAA 90 bp | GACCAGAGGACTGTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCTAAACATGCTCCTGAACATTaGCTAGGGGATTGGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: DQRTVIVVTAELMPHHPKHAPEH*LGDWHF Trigger: GAAGTGCCAATCCCCTAGCAAATGTTCAGGAGCATG...TTTAGGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTACAGTCCTCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
||
| CDS-3UTR CAA 90 bp | CAAGCTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCCATGCTCCTGAACATTaGCTAGGGGATTGGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QACLHSLTSISSCVCSLAHAPEH*LGDWHF Trigger: GAAGTGCCAATCCCCTAGCAAATGTTCAGGAGCATG...GGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
||
| CDS GCA 90 bp | GTATTCCAGTGTGTATTTCCTCTGCCACTGTGTAAGGTTCACCAATaGTGTGTCCTGTTGGATGAGTCTTTCCTGCTGCTCCAAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFQCVFPLPLCKVHQ*CVLLDESFLLLQDK Trigger: CTTGTCTTGGAGCAGCAGGAAAGACTCATCCAACAGGACACAGCATTGGTGAACCTTACACAGTGGCAGAGGAAATACACACTGGAATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 ENSMUST00000204860.3 |
||
| CDS GCA 90 bp | GATCTCTGCAGTAAGGCTTGGCAGTATTCCAGTGTGTATTTCCTCTaGCACTGTGTAAGGTTCACCAATGCTGTGTCCTGTTGGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLCSKAWQYSSVYFL*HCVRFTNAVSCWMS Trigger: ACTCATCCAACAGGACACAGCATTGGTGAACCTTACACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACTGCAGAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 ENSMUST00000204860.3 |
||
| CDS GCA 90 bp | AGTAACAACTTTTTCCATTCTGAATCCAGTTGTGTGGACAAGGGCTaGAGTCACTACCTGTTTCCTTGCTGTCCAGGGTCTGTGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SNNFFHSESSCVDKG*SHYLFPCCPGSVEP Trigger: TGGTTCCACAGACCCTGGACAGCAAGGAAACAGGTAGTGACTGCAGCCCTTGTCCACACAACTGGATTCAGAATGGAAAAAGTTGTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
||
| CDS CCA 90 bp | GTAGAAGCATCTGTGCCTGAATGGAGAGATCTCTGCAGTAAGGCTTaGCAGTATTCCAGTGTGTATTTCCTCTGCCACTGTGTAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VEASVPEWRDLCSKA*QYSSVYFLCHCVRF Trigger: GAACCTTACACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGCACAGATGCTTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
||
| CDS CCA 90 bp | TCTTTCTGCTGGCAACCTGAATGGAGAGATCTCTGCAGTAAGGCTTaGCAGTATTCCAGTGTGTATTTCCTCTGCCACTGTGTAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFCWQPEWRDLCSKA*QYSSVYFLCHCVRF Trigger: GAACCTTACACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGTTGCCAGCAGAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204860.3 |
||
| CDS GCA 90 bp | AGTAACAACTTTTTCCATTCTGAATCCAGTTGTGTGGACAAGGGCTaGAGTCACTACCTGAATGGAGAGATCTCTGCAGTAAGGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SNNFFHSESSCVDKG*SHYLNGEISAVRLG Trigger: GCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGTAGTGACTGCAGCCCTTGTCCACACAACTGGATTCAGAATGGAAAAAGTTGTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088075.8 |
||
| CDS GCA 90 bp | GTAAGGTTCACCAATGCTGTGTCCTGTTGGATGAGTCTTTCCTGCTaGTCCAAGACAAGAGAGGATACCTGGAAGACTGAACATTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VRFTNAVSCWMSLSC*SKTREDTWKTEHLL Trigger: TAGCAAATGTTCAGTCTTCCAGGTATCCTCTCTTGTCTTGGAGCAGCAGGAAAGACTCATCCAACAGGACACAGCATTGGTGAACCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164513.8 |
||
| CDS GCA 90 bp | TGTGTAAGGTTCACCAATGCTGTGTCCTGTTGGATGAGTCTTTCCTaGTGCTCCAAGACAAGAGAGGATACCTGGAAGACTGAACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CVRFTNAVSCWMSLS*CSKTREDTWKTEHL Trigger: CAAATGTTCAGTCTTCCAGGTATCCTCTCTTGTCTTGGAGCAGCAGGAAAGACTCATCCAACAGGACACAGCATTGGTGAACCTTACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164513.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTGTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCTAAAGCCATCTTCTTTGCTGTCTATTaGAAAGAGACTAGCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTVIVVTAELMPHHPKAIFFAVY*KETSAL Trigger: GAGGGCGCTAGTCTCTTTCAAATAGACAGCAAAGAA...GATGGCTTTAGGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTACAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| CDS-3UTR CAA 90 bp | AGCCTGTCCTGCAGTTCTCATTTGGGCCAGAGAGGGAGCACTTCCAACCATGAATATTTATTTCCTCCTTaGAGTTTCCCTATACTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SLSCSSHLGQRGSTSNHEYLFPP*SFPILL Trigger: CAGCAGTATAGGGAAACTCAAAGGAGGAAATAAATA...TTCATGGTTGGAAGTGCTCCCTCTCTGGCCCAAATGAGAACTGCAGGACAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| CDS-3UTR CAA 90 bp | GACCAGAGGACTGTAATAGTAGTCACTGCAGAGTTAATGCCCCACCACCCTAAATCCACTGATTCCATCTaGAAACACTCCCACCCAATA | + |
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Preference number: 5 (lower is better) Translates to: DQRTVIVVTAELMPHHPKSTDSI*KHSHPI Trigger: TATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGGA...TTTAGGGTGGTGGGGCATTAACTCTGCAGTGACTACTATTACAGTCCTCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058352.15 |
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| CDS-3UTR CAA 90 bp | CAAGCTTGCCTTCATAGTCTCACATCAATCTCCTCCTGTGTTTGCTCTTTGGCCTCCACTGATTCCATCTaGAAACACTCCCACCCAATA | + |
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Preference number: 5 (lower is better) Translates to: QACLHSLTSISSCVCSLASTDSI*KHSHPI Trigger: TATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGGA...GGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGCAAGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
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| CDS TCA 90 bp | GGAGAAGAGCCATCTTCCCAGAACCAAGATCCACTGATTCCATCTTaGAACACTCCCACCCAATATTTATTTCCTCCTTTGAGTTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: GEEPSSQNQDPLIPS*NTPTQYLFPPLSFP Trigger: AGGGAAACTCAAAGGAGGAAATAAATATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGGATCTTGGTTCTGGGAAGATGGCTCTTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 |
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| CDS CCA 90 bp | TTCAAAGACATAGTAACAACTTTTTCCATTCTGAATCCAGTTGTGTaGACAAGGGCTGCAGTCACTACCTGTTTCCTTGCTGTCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: FKDIVTTFSILNPVV*TRAAVTTCFLAVQG Trigger: ACCCTGGACAGCAAGGAAACAGGTAGTGACTGCAGCCCTTGTCCACACAACTGGATTCAGAATGGAAAAAGTTGTTACTATGTCTTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
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| CDS TCA 90 bp | TGCCTTCTTCTCACAGATAAAATATTTCCAGCTATCGCACTTATCTaGGATGAGAGTAGAATCTTTGAGGTATCCACAGATCTGGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: CLLLTDKIFPAIALI*DESRIFEVSTDLAG Trigger: GCCGGCCAGATCTGTGGATACCTCAAAGATTCTACTCTCATCTCAGATAAGTGCGATAGCTGGAAATATTTTATCTGTGAGAAGAAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 ENSMUST00000204860.3 |
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| CDS-3UTR CAA 90 bp | TTTGCTCTTTGGCCTCTTTCAAACACTTGTGTAACAGGTAGCTTTGAGTTGTATTTCTTTGCTGTCTATTaGAAAGAGACTAGCGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: FALWPLSNTCVTGSFELYFFAVY*KETSAL Trigger: GAGGGCGCTAGTCTCTTTCAAATAGACAGCAAAGAA...ATACAACTCAAAGCTACCTGTTACACAAGTGTTTGAAAGAGGCCAAAGAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
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| CDS-3UTR CAA 90 bp | TTTGCTCTTTGGCCTCTTTCAAACACTTGTGTAACAGGTAGCTTTGAGTTGTATTATTTATTTCCTCCTTaGAGTTTCCCTATACTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FALWPLSNTCVTGSFELYYLFPP*SFPILL Trigger: CAGCAGTATAGGGAAACTCAAAGGAGGAAATAAATA...ATACAACTCAAAGCTACCTGTTACACAAGTGTTTGAAAGAGGCCAAAGAGCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 |
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| CDS CCA 72 bp | GCAGTCACTACCTGTTTCCTTGCTGTCCAGGGTCTGTaGAACCATCTGTGGAGAGGTCAGAAGAACTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: AVTTCFLAVQGL*NHLWRGQKNWS Trigger: GGACCAGTTCTTCTGACCTCTCCACAGATGGTTCCACAGACCCTGGACAGCAAGGAAACAGGTAGTGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
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| CDS CAA 72 bp | TTGTGTGGACAAGGGCTGCAGTCACTACCTGTTTCCTaGCTGTCCAGGGTCTGTGGAACCATCTGTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LCGQGLQSLPVS*LSRVCGTICGE Trigger: CTCTCCACAGATGGTTCCACAGACCCTGGACAGCAAGGAAACAGGTAGTGACTGCAGCCCTTGTCCACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
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| CDS CCA 72 bp | CAGTTGTGTGGACAAGGGCTGCAGTCACTACCTGAATaGAGAGATCTCTGCAGTAAGGCTTGGCAGTATTCC | + |
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Preference number: 6 (lower is better) Translates to: QLCGQGLQSLPE*RDLCSKAWQYS Trigger: GGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGTAGTGACTGCAGCCCTTGTCCACACAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088075.8 |
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| CDS CCA 72 bp | GAGATGAGAGTAGAATCTTTGAGGTATCCACAGATCTaGCCGGCTGATCGCTGTCTTTCTGCTGGCAACCTG | + |
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Preference number: 6 (lower is better) Translates to: EMRVESLRYPQI*PADRCLSAGNL Trigger: CAGGTTGCCAGCAGAAAGACAGCGATCAGCCGGCCAGATCTGTGGATACCTCAAAGATTCTACTCTCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204860.3 |
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| CDS CAA 72 bp | CTGCCACTGTGTAAGGTTCACCAATGCTGTGTCCTGTaGGATGAGTCTTTCCTGCTGCTCCAAGACAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LPLCKVHQCCVL*DESFLLLQDKR Trigger: TCTCTTGTCTTGGAGCAGCAGGAAAGACTCATCCAACAGGACACAGCATTGGTGAACCTTACACAGTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 ENSMUST00000204860.3 |
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| CDS TCA 72 bp | GCTGCTCCAAGACAAGAGAGGATACCTGGAAGAACTTaGTGCCCAAGAAAATGGACGTTGCTAACAAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: AAPRQERIPGRT*CPRKWTLLTSP Trigger: TGGGCTTGTTAGCAACGTCCATTTTCTTGGGCATCAAGTTCTTCCAGGTATCCTCTCTTGTCTTGGAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000204860.3 |
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| CDS GCA 72 bp | ACCAATGCTGTGTCCTGTTGGATGAGTCTTTCCTGCTaGTCCAAGACAAGAGAGGATACCTGGAAGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: TNAVSCWMSLSC*SKTREDTWKNL Trigger: CAAGTTCTTCCAGGTATCCTCTCTTGTCTTGGAGCAGCAGGAAAGACTCATCCAACAGGACACAGCATTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000204860.3 |
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| CDS GCA 72 bp | TTCACCAATGCTGTGTCCTGTTGGATGAGTCTTTCCTaGTGCTCCAAGACAAGAGAGGATACCTGGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: FTNAVSCWMSLS*CSKTREDTWKN Trigger: GTTCTTCCAGGTATCCTCTCTTGTCTTGGAGCAGCAGGAAAGACTCATCCAACAGGACACAGCATTGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000204860.3 |
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| CDS GCA 72 bp | TGTGTATTTCCTCTGCCACTGTGTAAGGTTCACCAATaGTGTGTCCTGTTGGATGAGTCTTTCCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: CVFPLPLCKVHQ*CVLLDESFLLL Trigger: GAGCAGCAGGAAAGACTCATCCAACAGGACACAGCATTGGTGAACCTTACACAGTGGCAGAGGAAATACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 ENSMUST00000204860.3 |
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| CDS GCA 72 bp | TTTTTCCATTCTGAATCCAGTTGTGTGGACAAGGGCTaGAGTCACTACCTGTTTCCTTGCTGTCCAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: FFHSESSCVDKG*SHYLFPCCPGS Trigger: AGACCCTGGACAGCAAGGAAACAGGTAGTGACTGCAGCCCTTGTCCACACAACTGGATTCAGAATGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
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| CDS CCA 72 bp | TCTGTGCCTGAATGGAGAGATCTCTGCAGTAAGGCTTaGCAGTATTCCAGTGTGTATTTCCTCTGCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: SVPEWRDLCSKA*QYSSVYFLCHC Trigger: ACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
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| CDS CCA 72 bp | AGAAGAACTGGTCCAGTAGAAGCATCTGTGCCTGAATaGAGAGATCTCTGCAGTAAGGCTTGGCAGTATTCC | + |
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Preference number: 6 (lower is better) Translates to: RRTGPVEASVPE*RDLCSKAWQYS Trigger: GGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGCACAGATGCTTCTACTGGACCAGTTCTTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
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| CDS CCA 72 bp | TGGCAACCTGAATGGAGAGATCTCTGCAGTAAGGCTTaGCAGTATTCCAGTGTGTATTTCCTCTGCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: WQPEWRDLCSKA*QYSSVYFLCHC Trigger: ACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGTTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204860.3 |
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| CDS TCA 72 bp | ACATTTGCTAGGGGATTGGCACTTCTGAGAGGCCTCTaGGGTAGGAATGTCCCACTGAAGAGAGGTATATAT | + |
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Preference number: 6 (lower is better) Translates to: TFARGLALLRGL*GRNVPLKRGIY Trigger: ATATATACCTCTCTTCAGTGGGACATTCCTACCTCAGAGGCCTCTCAGAAGTGCCAATCCCCTAGCAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 ENSMUST00000204860.3 |
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| CDS GCA 72 bp | AGTAAGGCTTGGCAGTATTCCAGTGTGTATTTCCTCTaGCACTGTGTAAGGTTCACCAATGCTGTGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SKAWQYSSVYFL*HCVRFTNAVSC Trigger: ACAGGACACAGCATTGGTGAACCTTACACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 ENSMUST00000204860.3 |
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| CDS CCA 72 bp | AGTCTTTCCTGCTGCTCCAAGACAAGAGAGGATACCTaGAAGAACTTGATGCCCAAGAAAATGGACGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SLSCCSKTREDT*KNLMPKKMDVA Trigger: AGCAACGTCCATTTTCTTGGGCATCAAGTTCTTCCAGGTATCCTCTCTTGTCTTGGAGCAGCAGGAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000204860.3 |
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| CDS CCA 72 bp | TCACTACCTGAATGGAGAGATCTCTGCAGTAAGGCTTaGCAGTATTCCAGTGTGTATTTCCTCTGCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: SLPEWRDLCSKA*QYSSVYFLCHC Trigger: ACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATTCAGGTAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088075.8 |
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| CDS GCA 72 bp | TTTTTCCATTCTGAATCCAGTTGTGTGGACAAGGGCTaGAGTCACTACCTGAATGGAGAGATCTCTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: FFHSESSCVDKG*SHYLNGEISAV Trigger: TACTGCAGAGATCTCTCCATTCAGGTAGTGACTGCAGCCCTTGTCCACACAACTGGATTCAGAATGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088075.8 |
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| CDS CAA 90 bp | AGGAGAAGAGCCATCTTCCCAGAACCAAGATCCACTGATTCCATCTaGAAACACTCCCACCCAATATTTATTTCCTCCTTTGAGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: RRRAIFPEPRSTDSI*KHSHPIFISSFEFP Trigger: GGGAAACTCAAAGGAGGAAATAAATATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGGATCTTGGTTCTGGGAAGATGGCTCTTCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 |
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| CDS TCA 72 bp | CCATCTTCCCAGAACCAAGATCCACTGATTCCATCTTaGAACACTCCCACCCAATATTTATTTCCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PSSQNQDPLIPS*NTPTQYLFPPL Trigger: CAAAGGAGGAAATAAATATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGGATCTTGGTTCTGGGAAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 |
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| CDS CCA 72 bp | ATAGTAACAACTTTTTCCATTCTGAATCCAGTTGTGTaGACAAGGGCTGCAGTCACTACCTGTTTCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: IVTTFSILNPVV*TRAAVTTCFLA Trigger: AGCAAGGAAACAGGTAGTGACTGCAGCCCTTGTCCACACAACTGGATTCAGAATGGAAAAAGTTGTTACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058352.15 ENSMUST00000164513.8 |
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| CDS CAA 72 bp | GCCATCTTCCCAGAACCAAGATCCACTGATTCCATCTaGAAACACTCCCACCCAATATTTATTTCCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: AIFPEPRSTDSI*KHSHPIFISSF Trigger: AAAGGAGGAAATAAATATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGGATCTTGGTTCTGGGAAGATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 |
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| CDS TCA 72 bp | CTCACAGATAAAATATTTCCAGCTATCGCACTTATCTaGGATGAGAGTAGAATCTTTGAGGTATCCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: LTDKIFPAIALI*DESRIFEVSTD Trigger: ATCTGTGGATACCTCAAAGATTCTACTCTCATCTCAGATAAGTGCGATAGCTGGAAATATTTTATCTGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058352.15 ENSMUST00000088075.8 ENSMUST00000164513.8 ENSMUST00000204860.3 |
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