Pregenerated sensors for CLEC7A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079293Ensembl transcript IDs: ENSMUST00000112076.9, ENSMUST00000184581.3, ENSMUST00000195589.6
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCCAGACAGCATAAGGAAACAGTGAAATCTAGATACCAGATTTaGTATCAGAAAAGGTGGGCAGACTCTTTGAGTTATCTAGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: LARQHKETVKSRYQI*YQKRWADSLSYLVE Trigger: CTCAACTAGATAACTCAAAGAGTCTGCCCACCTTTTCTGATAGCAAATCTGGTATCTAGATTTCACTGTTTCCTTATGCTGTCTGGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CCA 90 bp | AAGGAAACAGTGAAATCTAGATACCAGATTTGCTATCAGAAAAGGTaGGCAGACTCTTTGAGTTATCTAGTTGAGGAAGTAGCTTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: KETVKSRYQICYQKR*ADSLSYLVEEVAWV Trigger: GACCCAAGCTACTTCCTCAACTAGATAACTCAAAGAGTCTGCCCACCTTTTCTGATAGCAAATCTGGTATCTAGATTTCACTGTTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR TCA 90 bp | GAAGTTCATTTTGCCTTCTCCCTGTGTCTGGTGTACTGTAGATACTaGGAAAATCATGCAAACACAGTGTGTACTCTGGTACCAATATTT | + |
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Preference number: 1 (lower is better) Translates to: EVHFAFSLCLVYCRY*ENHANTVCTLVPIF Trigger: AAATATTGGTACCAGAGTACACACTGTGTTTGCATGATTTTCTCAGTATCTACAGTACACCAGACACAGGGAGAAGGCAAAATGAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CCA 90 bp | TCATTTAATGATACTGATCTGTACATATGTTCAGTGCTGACTTCTTaGGGTTCAGTAGGCTTGATCCTAGAAAAAGCTTTCCCCCTATTT | + |
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Preference number: 1 (lower is better) Translates to: SFNDTDLYICSVLTS*GSVGLILEKAFPLF Trigger: AAATAGGGGGAAAGCTTTTTCTAGGATCAAGCCTACTGAACCCCAAGAAGTCAGCACTGAACATATGTACAGATCAGTATCATTAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTATAAACAGATCCCCAGCAATTTGGAAGTCCACACTGGAAATAAGGGTGTATTCTCTGTATTGTTaGGCTGCCCTCACTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: KAINRSPAIWKSTLEIRVYSLYC*AALTPC Trigger: ACATGGAGTGAGGGCAGCTCAACAATACAGAGAATA...CACCCTTATTTCCAGTGTGGACTTCCAAATTGCTGGGGATCTGTTTATAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR GCA 90 bp | TCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATATTGGCACCTTTGTCATACTaGTGGCCAGACAGCATAAGG | + |
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Preference number: 2 (lower is better) Translates to: SFSREQFSGLSTISAHILAPLSY*WPDSIR Trigger: CCTTATGCTGTCTGGCCAGCAGTATGACAAAGGTGC...CAATATGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR GCA 90 bp | TTCATAGGGCCTTGTGAAACTTCTACACCCATACCATACCATAACATACCATACTCTGTATTGTTGAGCTaGCCTCACTCCATGTCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: FIGPCETSTPIPYHNIPYSVLLS*PHSMSS Trigger: ACTAGACATGGAGTGAGGGCAGCTCAACAATACAGA...GTATGGTATGTTATGGTATGGTATGGGTGTAGAAGTTTCACAAGGCCCTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR CCA 90 bp | TCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATATTGCCTTCTCCCTGTGTCTaGTGTACTGTAGATACTGAG | + |
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Preference number: 2 (lower is better) Translates to: SFSREQFSGLSTISAHILPSPCV*CTVDTE Trigger: CTCAGTATCTACAGTACACCAGACACAGGGAGAAGG...CAATATGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR TCA 90 bp | TTCATAGGGCCTTGTGAAACTTCTACACCCATACCATACCATAACATACCATACGTTTCATTGTGGTTGTaGAATTTGAGTCAGGGTACC | + |
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Preference number: 2 (lower is better) Translates to: FIGPCETSTPIPYHNIPYVSLWL*NLSQGT Trigger: GGTACCCTGACTCAAATTTCACAACCACAATGAAAC...GTATGGTATGTTATGGTATGGTATGGGTGTAGAAGTTTCACAAGGCCCTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTATAAACAGATCCCCAGCAATTTGGAAGTCCACACTGGAAATAAGGGTGAGTAGGCTGATTCTCTaGCTTTTAAAGTCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: KAINRSPAIWKSTLEIRVSRLIL*LLKSSV Trigger: GACTGAAGACTTTAAAAGCCAGAGAATCAGCCTACT...CACCCTTATTTCCAGTGTGGACTTCCAAATTGCTGGGGATCTGTTTATAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR GCA 90 bp | TACCATAACATACCATACCAACTGAGGTTGTCATTATGCAGATTTTGTTTGCTGTCTGTATTGTTGAGCTaGCCTCACTCCATGTCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: YHNIPYQLRLSLCRFCLLSVLLS*PHSMSS Trigger: ACTAGACATGGAGTGAGGGCAGCTCAACAATACAGA...CAGCAAACAAAATCTGCATAATGACAACCTCAGTTGGTATGGTATGTTATGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR TCA 90 bp | GAAATATGTTCTGTGTTCCAAAACACTTATCCTGACTGGGCGCTTTTTAAATATTATTCTCTGTATTGTTaGGCTGCCCTCACTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: EICSVFQNTYPDWALFKYYSLYC*AALTPC Trigger: ACATGGAGTGAGGGCAGCTCAACAATACAGAGAATA...ATATTTAAAAAGCGCCCAGTCAGGATAAGTGTTTTGGAACACAGAACATATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR TCA 90 bp | TCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATATTGAATCCCTATTTGTGGTaGAGATTCTCTTCCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: SFSREQFSGLSTISAHILNPYLW*RFSSLI Trigger: AATGAGGGAAGAGAATCTTCACCACAAATAGGGATT...CAATATGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR CCA 90 bp | GAAATATGTTCTGTGTTCCAAAACACTTATCCTGACTGGGCGCTTTTTAAATATCCTTTGTCATACTGCTaGCCAGACAGCATAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: EICSVFQNTYPDWALFKYPLSYC*PDSIRK Trigger: TTTCCTTATGCTGTCTGGCCAGCAGTATGACAAAGG...ATATTTAAAAAGCGCCCAGTCAGGATAAGTGTTTTGGAACACAGAACATATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR TCA 90 bp | CATACCATACCAACTGAGGTTGTCATTATGCAGATTTTGTTTGCTGAATTGTATGTTTCATTGTGGTTGTaGAATTTGAGTCAGGGTACC | + |
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Preference number: 2 (lower is better) Translates to: HTIPTEVVIMQILFAELYVSLWL*NLSQGT Trigger: GGTACCCTGACTCAAATTTCACAACCACAATGAAAC...ATACAATTCAGCAAACAAAATCTGCATAATGACAACCTCAGTTGGTATGGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR TCA 90 bp | TCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATATTGGTGTACTGTAGATACTaGGAAAATCATGCAAACACA | + |
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Preference number: 2 (lower is better) Translates to: SFSREQFSGLSTISAHILVYCRY*ENHANT Trigger: TGTGTTTGCATGATTTTCTCAGTATCTACAGTACAC...CAATATGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR TCA 72 bp | TCAGAAAAGGTGGGCAGACTCTTTGAGTTATCTAGTTaGGGAAGTAGCTTGGGTCACGACGTTTGGGTGATG | + |
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Preference number: 3 (lower is better) Translates to: SEKVGRLFELSS*GSSLGHDVWVM Trigger: CATCACCCAAACGTCGTGACCCAAGCTACTTCCTCAACTAGATAACTCAAAGAGTCTGCCCACCTTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR TCA 72 bp | ATCTTTCCAACTACAGCATTTAAGGAGACTGCTTCCTaGAAGGGCAGCACCTTTGTCATACTGCTGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: IFPTTAFKETAS*KGSTFVILLAR Trigger: TCTGGCCAGCAGTATGACAAAGGTGCTGCCCTTTCAGGAAGCAGTCTCCTTAAATGCTGTAGTTGGAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR GCA 72 bp | GTACCTCAGGTTCACATATTCTCTGTATTGTTGAGCTaGCCTCACTCCATGTCTAGTGACTTCCTAACTGGA | + |
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Preference number: 3 (lower is better) Translates to: VPQVHIFSVLLS*PHSMSSDFLTG Trigger: TCCAGTTAGGAAGTCACTAGACATGGAGTGAGGGCAGCTCAACAATACAGAGAATATGTGAACCTGAGGTAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR CAA 90 bp | CCCAATCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATTCAGTGCTGACTTCTaGGGGTTCAGTAGGCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PNHFQENNSVDSAQFLPTFSADF*GFSRLD Trigger: ATCAAGCCTACTGAACCCCAAGAAGTCAGCACTGAA...TGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGATTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR TCA 72 bp | TTTGCCTTCTCCCTGTGTCTGGTGTACTGTAGATACTaGGAAAATCATGCAAACACAGTGTGTACTCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: FAFSLCLVYCRY*ENHANTVCTLV Trigger: TACCAGAGTACACACTGTGTTTGCATGATTTTCTCAGTATCTACAGTACACCAGACACAGGGAGAAGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR CAA 90 bp | GATCTGTACATATGTTCAGTGCTGACTTCTTGGGGTTCAGTAGGCTTGATCCTACCATACCAACTGAGGTaGTCATTATGCAGATTTTGT | + |
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Preference number: 3 (lower is better) Translates to: DLYICSVLTSWGSVGLILPYQLR*SLCRFC Trigger: ACAAAATCTGCATAATGACAACCTCAGTTGGTATGG...TAGGATCAAGCCTACTGAACCCCAAGAAGTCAGCACTGAACATATGTACAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CCA 72 bp | GATACTGATCTGTACATATGTTCAGTGCTGACTTCTTaGGGTTCAGTAGGCTTGATCCTAGAAAAAGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: DTDLYICSVLTS*GSVGLILEKAF Trigger: GAAAGCTTTTTCTAGGATCAAGCCTACTGAACCCCAAGAAGTCAGCACTGAACATATGTACAGATCAGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR TCA 72 bp | TTGTCATACTGCTGGCCAGACAGCATAAGGAAACAGTaGAATCTAGATACCAGATTTGCTATCAGAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LSYCWPDSIRKQ*NLDTRFAIRKG Trigger: ACCTTTTCTGATAGCAAATCTGGTATCTAGATTTCACTGTTTCCTTATGCTGTCTGGCCAGCAGTATGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR GCA 72 bp | CAGCATAAGGAAACAGTGAAATCTAGATACCAGATTTaGTATCAGAAAAGGTGGGCAGACTCTTTGAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: QHKETVKSRYQI*YQKRWADSLSY Trigger: ATAACTCAAAGAGTCTGCCCACCTTTTCTGATAGCAAATCTGGTATCTAGATTTCACTGTTTCCTTATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CCA 72 bp | GACGTTTGGGTGATGGCCATCTTAATAATGATCATGTaGGTGAAAATAGAATCCCTATTTGTGGTGAAGATT | + |
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Preference number: 3 (lower is better) Translates to: DVWVMAILIMIM*VKIESLFVVKI Trigger: AATCTTCACCACAAATAGGGATTCTATTTTCACCCACATGATCATTATTAAGATGGCCATCACCCAAACGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CCA 72 bp | GTGAAATCTAGATACCAGATTTGCTATCAGAAAAGGTaGGCAGACTCTTTGAGTTATCTAGTTGAGGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: VKSRYQICYQKR*ADSLSYLVEEV Trigger: TACTTCCTCAACTAGATAACTCAAAGAGTCTGCCCACCTTTTCTGATAGCAAATCTGGTATCTAGATTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTGTGTTCCAAAACACTTATCCTGACTGGGCGCTTTTTAAATATTCACTACCATACCAACTGAGGTaGTCATTATGCAGATTTTGT | + |
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Preference number: 3 (lower is better) Translates to: CSVFQNTYPDWALFKYSLPYQLR*SLCRFC Trigger: ACAAAATCTGCATAATGACAACCTCAGTTGGTATGG...TAGTGAATATTTAAAAAGCGCCCAGTCAGGATAAGTGTTTTGGAACACAGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CAA 72 bp | CATTTAAGGAGACTGCTTCCTGAAAGGGCAGCACCTTaGTCATACTGCTGGCCAGACAGCATAAGGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: HLRRLLPERAAP*SYCWPDSIRKQ Trigger: CTGTTTCCTTATGCTGTCTGGCCAGCAGTATGACAAAGGTGCTGCCCTTTCAGGAAGCAGTCTCCTTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | CTTCAGTCTCACTCCTCTACAGTGTTTCCTGATAGTGTAGGGGTTTCATTGTGGGGGGAGCTGTATTTCTaGCTTGAAACGAGTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LQSHSSTVFPDSVGVSLWGELYF*LETSWG Trigger: TCCCCAACTCGTTTCAAGTCAGAAATACAGCTCCCC...CCACAATGAAACCCCTACACTATCAGGAAACACTGTAGAGGAGTGAGACTGAAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | TGTCTAGAAAACACCACAGTAAGTAGGCTGATTCTCTGGCTTTTAAAGTCTTCAAATGGGCCTCCAAGGTaGAGATGGAGCCTGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CLENTTVSRLILWLLKSSNGPPR*RWSLAS Trigger: GGAAGCCAGGCTCCATCTTCACCTTGGAGGCCCATT...TGAAGACTTTAAAAGCCAGAGAATCAGCCTACTTACTGTGGTGTTTTCTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CAA 72 bp | GTCAGGGTACCTCAGGTTCACATATTCTCTGTATTGTaGAGCTGCCCTCACTCCATGTCTAGTGACTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: VRVPQVHIFSVL*SCPHSMSSDFL Trigger: TAGGAAGTCACTAGACATGGAGTGAGGGCAGCTCAACAATACAGAGAATATGTGAACCTGAGGTACCCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | TACCATAACATACCATACCAACTGAGGTTGTCATTATGCAGATTTTGTTTGCTGAATGGGCCTCCAAGGTaGAGATGGAGCCTGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: YHNIPYQLRLSLCRFCLLNGPPR*RWSLAS Trigger: GGAAGCCAGGCTCCATCTTCACCTTGGAGGCCCATT...CAGCAAACAAAATCTGCATAATGACAACCTCAGTTGGTATGGTATGTTATGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | CTTCTCAATTTAGAAGTTCATTTTGCCTTCTCCCTGTGTCTGGTGTACTGTAGAGTTGGGGAAGAATGCTaGTCCATCCTCCCAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: LLNLEVHFAFSLCLVYCRVGEEC*SILPEP Trigger: TGGTTCTGGGAGGATGGATCAGCATTCTTCCCCAAC...TCTACAGTACACCAGACACAGGGAGAAGGCAAAATGAACTTCTAAATTGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR GCA 90 bp | CCCAATCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACAGCCCTTCACTCTGATTaGGGGAAAGGCCTATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: PNHFQENNSVDSAQFLPTALHSD*GKGLSK Trigger: TTTGGATAGGCCTTTCCCGCAATCAGAGTGAAGGGC...TGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGATTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | TCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATATTGGTTGGGGAAGAATGCTaGTCCATCCTCCCAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: SFSREQFSGLSTISAHILVGEEC*SILPEP Trigger: TGGTTCTGGGAGGATGGATCAGCATTCTTCCCCAAC...CAATATGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CCA 90 bp | TGTCTAGAAAACACCACAGTAAGTAGGCTGATTCTCTGGCTTTTAAAGTCTTCAGGTGAAGATGGAGCCTaGCTTCCTTTCTCTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: CLENTTVSRLILWLLKSSGEDGA*LPFSDP Trigger: GGGATCAGAGAAAGGAAGCCAGGCTCCATCTTCACC...TGAAGACTTTAAAAGCCAGAGAATCAGCCTACTTACTGTGGTGTTTTCTAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CCA 90 bp | CTTCTCAATTTAGAAGTTCATTTTGCCTTCTCCCTGTGTCTGGTGTACTGTAGACTAAACCCACTGCAATaGGCCTCCAAGGTGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: LLNLEVHFAFSLCLVYCRLNPLQ*ASKVKM Trigger: CATCTTCACCTTGGAGGCCCATTGCAGTGGGTTTAG...TCTACAGTACACCAGACACAGGGAGAAGGCAAAATGAACTTCTAAATTGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CAA 72 bp | TACCAGATTTGCTATCAGAAAAGGTGGGCAGACTCTTaGAGTTATCTAGTTGAGGAAGTAGCTTGGGTCACG | + |
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Preference number: 4 (lower is better) Translates to: YQICYQKRWADS*SYLVEEVAWVT Trigger: CGTGACCCAAGCTACTTCCTCAACTAGATAACTCAAAGAGTCTGCCCACCTTTTCTGATAGCAAATCTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | CCCAATCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATTAGGAAGGCAAGGCTaGGAAAAACCTCCTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: PNHFQENNSVDSAQFLPTLGRQG*EKPPVV Trigger: AACTACAGGAGGTTTTTCTCAGCCTTGCCTTCCTAA...TGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGATTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | TGTCTAGAAAACACCACAGTAAGTAGGCTGATTCTCTGGCTTTTAAAGTCTTCATCTATCTTCAGTAGATaGGCACCTAGCTGGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CLENTTVSRLILWLLKSSSIFSR*APSWEQ Trigger: CTGCTCCCAGCTAGGTGCTCATCTACTGAAGATAGA...TGAAGACTTTAAAAGCCAGAGAATCAGCCTACTTACTGTGGTGTTTTCTAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | GTGAAGATGACAAGTACAAAAGTCTCAGCTTCTTCATCCAAGTTCTCAAATGAGTCTATCTTCAGTAGATaGGCACCTAGCTGGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VKMTSTKVSASSSKFSNESIFSR*APSWEQ Trigger: CTGCTCCCAGCTAGGTGCTCATCTACTGAAGATAGA...CTCATTTGAGAACTTGGATGAAGAAGCTGAGACTTTTGTACTTGTCATCTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | GTCATACTGCTGGCCAGACAGCATAAGGAAACAGTGAAATCTAGATACCAGATTCTCTGGATTTCTCCCTaGATTGTGTCACCAAAATGC | + |
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Preference number: 4 (lower is better) Translates to: VILLARQHKETVKSRYQILWISP*IVSPKC Trigger: GCATTTTGGTGACACAATTCAGGGAGAAATCCAGAG...AATCTGGTATCTAGATTTCACTGTTTCCTTATGCTGTCTGGCCAGCAGTATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | AAAGCTATAAACAGATCCCCAGCAATTTGGAAGTCCACACTGGAAATAAGGGTGGCTGTATTTCTGACTTaGAACGAGTTGGGGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: KAINRSPAIWKSTLEIRVAVFLT*NELGKN Trigger: ATTCTTCCCCAACTCGTTTCAAGTCAGAAATACAGC...CACCCTTATTTCCAGTGTGGACTTCCAAATTGCTGGGGATCTGTTTATAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR GCA 90 bp | TACCATAACATACCATACCAACTGAGGTTGTCATTATGCAGATTTTGTTTGCTGGCCCTTCACTCTGATTaGGGGAAAGGCCTATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YHNIPYQLRLSLCRFCLLALHSD*GKGLSK Trigger: TTTGGATAGGCCTTTCCCGCAATCAGAGTGAAGGGC...CAGCAAACAAAATCTGCATAATGACAACCTCAGTTGGTATGGTATGTTATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR GCA 90 bp | CCCAATCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACAATCCATACACAATTGTaGAGTAAGCTTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNHFQENNSVDSAQFLPTIHTQL*SKLSWG Trigger: TCCCCAGGAAAGCTTACTGCACAATTGTGTATGGAT...TGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGATTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CCA 90 bp | ATAATGATCATGTGGGTGAAAATAGAATCCCTATTTGTGGTGAAGATTCTCTTCGGTGAAGATGGAGCCTaGCTTCCTTTCTCTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: IMIMWVKIESLFVVKILFGEDGA*LPFSDP Trigger: GGGATCAGAGAAAGGAAGCCAGGCTCCATCTTCACC...GAAGAGAATCTTCACCACAAATAGGGATTCTATTTTCACCCACATGATCATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | TTCATAGGGCCTTGTGAAACTTCTACACCCATACCATACCATAACATACCATACGCTGTATTTCTGACTTaGAACGAGTTGGGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FIGPCETSTPIPYHNIPYAVFLT*NELGKN Trigger: ATTCTTCCCCAACTCGTTTCAAGTCAGAAATACAGC...GTATGGTATGTTATGGTATGGTATGGGTGTAGAAGTTTCACAAGGCCCTATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | CATACCATACCAACTGAGGTTGTCATTATGCAGATTTTGTTTGCTGAATTGTATGGGGAGCTGTATTTCTaGCTTGAAACGAGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTIPTEVVIMQILFAELYGELYF*LETSWG Trigger: TCCCCAACTCGTTTCAAGTCAGAAATACAGCTCCCC...ATACAATTCAGCAAACAAAATCTGCATAATGACAACCTCAGTTGGTATGGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | CTTCTCAATTTAGAAGTTCATTTTGCCTTCTCCCTGTGTCTGGTGTACTGTAGAGGATGTCTTGAGTGCTaGAGTCTAATTGAGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: LLNLEVHFAFSLCLVYCRGCLEC*SLIEYI Trigger: GATATACTCAATTAGACTTCAGCACTCAAGACATCC...TCTACAGTACACCAGACACAGGGAGAAGGCAAAATGAACTTCTAAATTGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | GTCATACTGCTGGCCAGACAGCATAAGGAAACAGTGAAATCTAGATACCAGATTCTCACAGATACTGTATaGAGAAGTATTGCAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VILLARQHKETVKSRYQILTDTV*RSIADL Trigger: CAAATCTGCAATACTTCTTCATACAGTATCTGTGAG...AATCTGGTATCTAGATTTCACTGTTTCCTTATGCTGTCTGGCCAGCAGTATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CCA 90 bp | GTCATACTGCTGGCCAGACAGCATAAGGAAACAGTGAAATCTAGATACCAGATTCTAAAGATGATTCTGTaGGCTTGTGGTTCTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VILLARQHKETVKSRYQILKMIL*ACGSLY Trigger: ATAAAGAGAACCACAAGCCCACAGAATCATCTTTAG...AATCTGGTATCTAGATTTCACTGTTTCCTTATGCTGTCTGGCCAGCAGTATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | TCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATATTGGGATGTCTTGAGTGCTaGAGTCTAATTGAGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: SFSREQFSGLSTISAHILGCLEC*SLIEYI Trigger: GATATACTCAATTAGACTTCAGCACTCAAGACATCC...CAATATGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | GGTGATGGCCATCTTAATAATGATCATGTGGGTGAAAATAGAATCCCTATTTGTTTGGTTGTAGACCTCTaGTCCATGAATCCATACACA | + |
|
Preference number: 4 (lower is better) Translates to: GDGHLNNDHVGENRIPICLVVDL*SMNPYT Trigger: TGTGTATGGATTCATGGATCAGAGGTCTACAACCAA...ACAAATAGGGATTCTATTTTCACCCACATGATCATTATTAAGATGGCCATCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR GCA 90 bp | GTCATACTGCTGGCCAGACAGCATAAGGAAACAGTGAAATCTAGATACCAGATTTGTATGAAGAAGTATTaGAGATTTGGTTGTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VILLARQHKETVKSRYQICMKKY*RFGCRP Trigger: AGGTCTACAACCAAATCTGCAATACTTCTTCATACA...AATCTGGTATCTAGATTTCACTGTTTCCTTATGCTGTCTGGCCAGCAGTATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CCA 90 bp | GAAATATGTTCTGTGTTCCAAAACACTTATCCTGACTGGGCGCTTTTTAAATATCTTTCTCTGATCCCCTaGGCCTTTTATGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EICSVFQNTYPDWALFKYLSLIP*AFYGCL Trigger: AAGACATCCATAAAAGGCCCAGGGGATCAGAGAAAG...ATATTTAAAAAGCGCCCAGTCAGGATAAGTGTTTTGGAACACAGAACATATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CCA 90 bp | ATAATGATCATGTGGGTGAAAATAGAATCCCTATTTGTGGTGAAGATTCTCTTCCTTTCTCTGATCCCCTaGGCCTTTTATGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IMIMWVKIESLFVVKILFLSLIP*AFYGCL Trigger: AAGACATCCATAAAAGGCCCAGGGGATCAGAGAAAG...GAAGAGAATCTTCACCACAAATAGGGATTCTATTTTCACCCACATGATCATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR TCA 90 bp | ACTTCTACACCCATACCATACCATAACATACCATACCAACTGAGGTTGTCATTACTCACAGATACTGTATaGAGAAGTATTGCAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSTPIPYHNIPYQLRLSLLTDTV*RSIADL Trigger: CAAATCTGCAATACTTCTTCATACAGTATCTGTGAG...TAATGACAACCTCAGTTGGTATGGTATGTTATGGTATGGTATGGGTGTAGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR GCA 90 bp | ATAATGATCATGTGGGTGAAAATAGAATCCCTATTTGTGGTGAAGATTCTCTTCATCCATACACAATTGTaGAGTAAGCTTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IMIMWVKIESLFVVKILFIHTQL*SKLSWG Trigger: TCCCCAGGAAAGCTTACTGCACAATTGTGTATGGAT...GAAGAGAATCTTCACCACAAATAGGGATTCTATTTTCACCCACATGATCATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CCA 90 bp | CATACCATACCAACTGAGGTTGTCATTATGCAGATTTTGTTTGCTGAATTGTATCTAAAGATGATTCTGTaGGCTTGTGGTTCTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HTIPTEVVIMQILFAELYLKMIL*ACGSLY Trigger: ATAAAGAGAACCACAAGCCCACAGAATCATCTTTAG...ATACAATTCAGCAAACAAAATCTGCATAATGACAACCTCAGTTGGTATGGTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| 3UTR CAA 72 bp | CCCATACCATACCATAACATACCATACCAACTGAGGTaGTCATTATGCAGATTTTGTTTGCTGAATTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: PIPYHNIPYQLR*SLCRFCLLNCI Trigger: AATACAATTCAGCAAACAAAATCTGCATAATGACAACCTCAGTTGGTATGGTATGTTATGGTATGGTATGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS TCA 90 bp | CTGGGGAGCTGTATTTCTGACTTGAAACGAGTTGGGGAAGAATGCTaGTCCATCCTCCCAGAACCATGGCCCTTCACTCTGATTGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGSCISDLKRVGEEC*SILPEPWPFTLIAG Trigger: TCCCGCAATCAGAGTGAAGGGCCATGGTTCTGGGAGGATGGATCAGCATTCTTCCCCAACTCGTTTCAAGTCAGAAATACAGCTCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | AAAGCTATAAACAGATCCCCAGCAATTTGGAAGTCCACACTGGAAATAAGGGTGGTAGTTTGGGATGCCTaGGAGGGAGCCACCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KAINRSPAIWKSTLEIRVVVWDA*EGATFS Trigger: TGAGAAGGTGGCTCCCTCCAAGGCATCCCAAACTAC...CACCCTTATTTCCAGTGTGGACTTCCAAATTGCTGGGGATCTGTTTATAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS TCA 90 bp | ACACAATTGTGCAGTAAGCTTTCCTGGGGAGCTGTATTTCTGACTTaGAACGAGTTGGGGAAGAATGCTGATCCATCCTCCCAGAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: TQLCSKLSWGAVFLT*NELGKNADPSSQNH Trigger: ATGGTTCTGGGAGGATGGATCAGCATTCTTCCCCAACTCGTTTCAAGTCAGAAATACAGCTCCCCAGGAAAGCTTACTGCACAATTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
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| CDS TCA 90 bp | TCCATACACAATTGTGCAGTAAGCTTTCCTGGGGAGCTGTATTTCTaGCTTGAAACGAGTTGGGGAAGAATGCTGATCCATCCTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIHNCAVSFPGELYF*LETSWGRMLIHPPR Trigger: TCTGGGAGGATGGATCAGCATTCTTCCCCAACTCGTTTCAAGTCAGAAATACAGCTCCCCAGGAAAGCTTACTGCACAATTGTGTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | GGTGATGGCCATCTTAATAATGATCATGTGGGTGAAAATAGAATCCCTATTTGTGTAGTTTGGGATGCCTaGGAGGGAGCCACCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GDGHLNNDHVGENRIPICVVWDA*EGATFS Trigger: TGAGAAGGTGGCTCCCTCCAAGGCATCCCAAACTAC...ACAAATAGGGATTCTATTTTCACCCACATGATCATTATTAAGATGGCCATCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | GTGAAGATGACAAGTACAAAAGTCTCAGCTTCTTCATCCAAGTTCTCAAATGAGAAAACCTCCTGTAGTTaGGGATGCCTTGGAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VKMTSTKVSASSSKFSNEKTSCS*GCLGGS Trigger: GCTCCCTCCAAGGCATCCCAAACTACAGGAGGTTTT...CTCATTTGAGAACTTGGATGAAGAAGCTGAGACTTTTGTACTTGTCATCTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | TGTTCTGTGTTCCAAAACACTTATCCTGACTGGGCGCTTTTTAAATATTCACTAAAAACCTCCTGTAGTTaGGGATGCCTTGGAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSVFQNTYPDWALFKYSLKTSCS*GCLGGS Trigger: GCTCCCTCCAAGGCATCCCAAACTACAGGAGGTTTT...TAGTGAATATTTAAAAAGCGCCCAGTCAGGATAAGTGTTTTGGAACACAGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | ACTTCTACACCCATACCATACCATAACATACCATACCAACTGAGGTTGTCATTAGGATTTCTCCCTGAATaGTGTCCATACTCACCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSTPIPYHNIPYQLRLSLGFLPE*CPYSPR Trigger: CCTAGGTGAGTATGGACACAATTCAGGGAGAAATCC...TAATGACAACCTCAGTTGGTATGGTATGTTATGGTATGGTATGGGTGTAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112076.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCAATTTAGAAGTTCATTTTGCCTTCTCCCTGTGTCTGGTGTACTGTAGAGGATTTCTCCCTGAATaGTGTCACCAAAATGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLNLEVHFAFSLCLVYCRGFLPE*CHQNAR Trigger: CCTAGCATTTTGGTGACACAATTCAGGGAGAAATCC...TCTACAGTACACCAGACACAGGGAGAAGGCAAAATGAACTTCTAAATTGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195589.6 |
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| CDS TCA 90 bp | TTCCTTTCTCTGATCCCCTGGGCCTTTTATGGATGTCTTGAGTGCTaGAGTCTAATTGAGTATATCCATCTTCATCCAGATTCTCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: FLSLIPWAFYGCLEC*SLIEYIHLHPDSLY Trigger: ATATAGAGAATCTGGATGAAGATGGATATACTCAATTAGACTTCAGCACTCAAGACATCCATAAAAGGCCCAGGGGATCAGAGAAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | TTCATAGGGCCTTGTGAAACTTCTACACCCATACCATACCATAACATACCATACGATGATTCTGTGGGCTaGTGGTTCTCTTTATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FIGPCETSTPIPYHNIPYDDSVG*WFSLFL Trigger: AAGAAATAAAGAGAACCACAAGCCCACAGAATCATC...GTATGGTATGTTATGGTATGGTATGGGTGTAGAAGTTTCACAAGGCCCTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | CTTCTCAATTTAGAAGTTCATTTTGCCTTCTCCCTGTGTCTGGTGTACTGTAGAGATGATTCTGTGGGCTaGTGGTTCTCTTTATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLNLEVHFAFSLCLVYCRDDSVG*WFSLFL Trigger: AAGAAATAAAGAGAACCACAAGCCCACAGAATCATC...TCTACAGTACACCAGACACAGGGAGAAGGCAAAATGAACTTCTAAATTGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | TCATTTTCAAGAGAACAATTCAGTGGACTCAGCACAATTTCTGCCCACATATTGTTTCTTGATAGGAAGTaGTCTTTCTCCTCTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: SFSREQFSGLSTISAHILFLDRK*SFSSGF Trigger: AAATCCAGAGGAGAAAGACAACTTCCTATCAAGAAA...CAATATGTGGGCAGAAATTGTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS-3UTR CAA 90 bp | TGTTCTGTGTTCCAAAACACTTATCCTGACTGGGCGCTTTTTAAATATTCACTATTTCTTGATAGGAAGTaGTCTTTCTCCTCTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: CSVFQNTYPDWALFKYSLFLDRK*SFSSGF Trigger: AAATCCAGAGGAGAAAGACAACTTCCTATCAAGAAA...TAGTGAATATTTAAAAAGCGCCCAGTCAGGATAAGTGTTTTGGAACACAGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS CCA 72 bp | CCCACTGCAATGGGCCTCCAAGGTGAAGATGGAGCCTaGCTTCCTTTCTCTGATCCCCTGGGCCTTTTATGG | + |
|
Preference number: 6 (lower is better) Translates to: PTAMGLQGEDGA*LPFSDPLGLLW Trigger: CCATAAAAGGCCCAGGGGATCAGAGAAAGGAAGCCAGGCTCCATCTTCACCTTGGAGGCCCATTGCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
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| CDS CCA 72 bp | CTACCACAAAGCACAGGATTCCTAAACCCACTGCAATaGGCCTCCAAGGTGAAGATGGAGCCTGGCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPQSTGFLNPLQ*ASKVKMEPGFL Trigger: AAGGAAGCCAGGCTCCATCTTCACCTTGGAGGCCCATTGCAGTGGGTTTAGGAATCCTGTGCTTTGTGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
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| CDS CAA 72 bp | AGGAAGTTGTCTTTCTCCTCTGGATTTCTCCCTGAATaGTGTCCATACTCACCTAGGGCACCCAGCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RKLSFSSGFLPE*CPYSPRAPSTA Trigger: TGCAGTGCTGGGTGCCCTAGGTGAGTATGGACACAATTCAGGGAGAAATCCAGAGGAGAAAGACAACTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112076.9 |
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| CDS TCA 72 bp | CTCTTCCCATGCATGATCCAATTAGGAAGGCAAGGCTaGGAAAAACCTCCTGTAGTTTGGGATGCCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LFPCMIQLGRQG*EKPPVVWDALE Trigger: CTCCAAGGCATCCCAAACTACAGGAGGTTTTTCTCAGCCTTGCCTTCCTAATTGGATCATGCATGGGAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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| CDS TCA 72 bp | GCTGATCCATCCTCCCAGAACCATGGCCCTTCACTCTaGTTGCGGGAAAGGCCTATCCAAAATGCATTAATA | + |
|
Preference number: 6 (lower is better) Translates to: ADPSSQNHGPSL*LRERPIQNALI Trigger: TATTAATGCATTTTGGATAGGCCTTTCCCGCAATCAGAGTGAAGGGCCATGGTTCTGGGAGGATGGATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
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| CDS TCA 72 bp | TGTATTTCTGACTTGAAACGAGTTGGGGAAGAATGCTaGTCCATCCTCCCAGAACCATGGCCCTTCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CISDLKRVGEEC*SILPEPWPFTL Trigger: CAGAGTGAAGGGCCATGGTTCTGGGAGGATGGATCAGCATTCTTCCCCAACTCGTTTCAAGTCAGAAATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
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| CDS CAA 72 bp | AGGAAGTTGTCTTTCTCCTCTGGATTTCTCCCTGAATaGTGTCACCAAAATGCTAGGGCACCCAGCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RKLSFSSGFLPE*CHQNARAPSTA Trigger: TGCAGTGCTGGGTGCCCTAGCATTTTGGTGACACAATTCAGGGAGAAATCCAGAGGAGAAAGACAACTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195589.6 |
||
| CDS CAA 90 bp | TTTCTTGATAGGAAGTTGTCTTTCTCCTCTGGATTTCTCCCTGAATaGTGTCCATACTCACCTAGGGCACCCAGCACTGCAGCAACCACT | + |
|
Preference number: 6 (lower is better) Translates to: FLDRKLSFSSGFLPE*CPYSPRAPSTAATT Trigger: AGTGGTTGCTGCAGTGCTGGGTGCCCTAGGTGAGTATGGACACAATTCAGGGAGAAATCCAGAGGAGAAAGACAACTTCCTATCAAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112076.9 |
||
| CDS CAA 90 bp | TTTCTTGATAGGAAGTTGTCTTTCTCCTCTGGATTTCTCCCTGAATaGTGTCACCAAAATGCTAGGGCACCCAGCACTGCAGCAACCACT | + |
|
Preference number: 6 (lower is better) Translates to: FLDRKLSFSSGFLPE*CHQNARAPSTAATT Trigger: AGTGGTTGCTGCAGTGCTGGGTGCCCTAGCATTTTGGTGACACAATTCAGGGAGAAATCCAGAGGAGAAAGACAACTTCCTATCAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195589.6 |
||
| CDS TCA 72 bp | AATTGTGCAGTAAGCTTTCCTGGGGAGCTGTATTTCTaGCTTGAAACGAGTTGGGGAAGAATGCTGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: NCAVSFPGELYF*LETSWGRMLIH Trigger: ATGGATCAGCATTCTTCCCCAACTCGTTTCAAGTCAGAAATACAGCTCCCCAGGAAAGCTTACTGCACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
||
| CDS GCA 72 bp | CCCTTCACTCTGATTGCGGGAAAGGCCTATCCAAAATaGATTAATACGGTGAGACGATGTTTGGCTTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PFTLIAGKAYPK*INTVRRCLAFN Trigger: ATTGAAAGCCAAACATCGTCTCACCGTATTAATGCATTTTGGATAGGCCTTTCCCGCAATCAGAGTGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112076.9 ENSMUST00000184581.3 ENSMUST00000195589.6 |
||
| CDS CCA 72 bp | TGGAGGGAGCCACCTTCTCATCTAAAGATGATTCTGTaGGCTTGTGGTTCTCTTTATTTCTTGATAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: WREPPSHLKMIL*ACGSLYFLIGS Trigger: ACTTCCTATCAAGAAATAAAGAGAACCACAAGCCCACAGAATCATCTTTAGATGAGAAGGTGGCTCCCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112076.9 ENSMUST00000195589.6 |
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