Pregenerated sensors for CLEC5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029915Ensembl transcript IDs: ENSMUST00000101491.11, ENSMUST00000129948.9, ENSMUST00000177178.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGACCTCTGCTTCTACGATGTTGTATGGGAATGGGAGGCTTTCTaGAATGGGGGATGTTGTGAAGCCAAGTTTATATTCTTCTGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: KDLCFYDVVWEWEAF*NGGCCEAKFIFFCP Trigger: TGGGCAGAAGAATATAAACTTGGCTTCACAACATCCCCCATTCCAGAAAGCCTCCCATTCCCATACAACATCGTAGAAGCAGAGGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 90 bp | TTTCTCATGCCAGCCCCTGTGCAGGCTTCTTTAAGAACCTGTACATaGGTAACTTCTCATCTTGTGGGAGATTCAGACTTCAACCACAGA | + |
|
Preference number: 1 (lower is better) Translates to: FLMPAPVQASLRTCT*VTSHLVGDSDFNHR Trigger: TCTGTGGTTGAAGTCTGAATCTCCCACAAGATGAGAAGTTACTCATGTACAGGTTCTTAAAGAAGCCTGCACAGGGGCTGGCATGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 90 bp | AGATTCAGACTTCAACCACAGAAATCACTAGATGTCCTCATTTCCTaGCCCCAGGAGTCTGCAACTCTTCTGTCCAAAGATAGGAAGTGT | + |
|
Preference number: 1 (lower is better) Translates to: RFRLQPQKSLDVLIS*PQESATLLSKDRKC Trigger: ACACTTCCTATCTTTGGACAGAAGAGTTGCAGACTCCTGGGGTCAGGAAATGAGGACATCTAGTGATTTCTGTGGTTGAAGTCTGAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 90 bp | TCAAAAAGGACCAAGATTTCCTTTCTGTTGTCTGAGTTATGGGTCTaGCCTCTGGTTAGAACACAATTGCTTCTCCCTACCATAGATTCT | + |
|
Preference number: 1 (lower is better) Translates to: SKRTKISFLLSELWV*PLVRTQLLLPTIDS Trigger: AGAATCTATGGTAGGGAGAAGCAATTGTGTTCTAACCAGAGGTCAGACCCATAACTCAGACAACAGAAAGGAAATCTTGGTCCTTTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 90 bp | AAAGGCCACATTTATTTACCCTTCACGAGTCCCTTCCCTAGTAATTaGAACAATATACACAGAGTCCCTGAATATTCTTTTTCTCATGCC | + |
|
Preference number: 1 (lower is better) Translates to: KGHIYLPFTSPFPSN*NNIHRVPEYSFSHA Trigger: GGCATGAGAAAAAGAATATTCAGGGACTCTGTGTATATTGTTTCAATTACTAGGGAAGGGACTCGTGAAGGGTAAATAAATGTGGCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCTACGATGTTGTATGGGAATGGGAGGCTTTCTGGAATGGGGGATGTTGTGGATGGGCACAGTCTTTaGTGCTCTATATTTCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: ASTMLYGNGRLSGMGDVVDGHSL*CSIFPG Trigger: CCCAGGAAATATAGAGCATCAAAGACTGTGCCCATC...CACAACATCCCCCATTCCAGAAAGCCTCCCATTCCCATACAACATCGTAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTGGGAGCAAAATGAAAGGGCTGAGGATAGTACTGCCCTCAGAGAGACCAATATTCTTTTTCTCATaGCAGCCCCTGTGCAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: WLGSKMKGLRIVLPSERPIFFFS*QPLCRL Trigger: AAGCCTGCACAGGGGCTGGCATGAGAAAAAGAATAT...TGGTCTCTCTGAGGGCAGTACTATCCTCAGCCCTTTCATTTTGCTCCCAAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CCA 90 bp | TACTGCCCTCAGAGAGACCACACTCTCAGGGACCTAAATCAATTCCAGGAGTTCGATGTTGTATGGGAATaGGAGGCTTTCTGGAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: YCPQRDHTLRDLNQFQEFDVVWE*EAFWNG Trigger: CCCATTCCAGAAAGCCTCCCATTCCCATACAACATC...GAACTCCTGGAATTGATTTAGGTCCCTGAGAGTGTGGTCTCTCTGAGGGCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTACTGCCCTCAGAGAGACCACACTCTCAGGGACCTAAATCAATTCCAGGAAGGGAACTCCACCTATaGAAGATGGGCACAGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: IVLPSERPHSQGPKSIPGRELHL*KMGTVF Trigger: AAAGACTGTGCCCATCTTCCATAGGTGGAGTTCCCT...TCCTGGAATTGATTTAGGTCCCTGAGAGTGTGGTCTCTCTGAGGGCAGTACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTGGGAGCAAAATGAAAGGGCTGAGGATAGTACTGCCCTCAGAGAGACCAACTGCATTTCCATATTaGTTTCATCTCCAGAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: WLGSKMKGLRIVLPSERPTAFPY*FHLQNP Trigger: AGGATTCTGGAGATGAAATCAATATGGAAATGCAGT...TGGTCTCTCTGAGGGCAGTACTATCCTCAGCCCTTTCATTTTGCTCCCAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CCA 90 bp | CATGCCAGCCCCTGTGCAGGCTTCTTTAAGAACCTGTACATGAGTAACTTCTCACTTGAGTGTTTTTCCTaGCTCCTCCTGTCTCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: HASPCAGFFKNLYMSNFSLECFS*LLLSLF Trigger: AAAAAGAGACAGGAGGAGCCAGGAAAAACACTCAAG...TGAGAAGTTACTCATGTACAGGTTCTTAAAGAAGCCTGCACAGGGGCTGGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR TCA 90 bp | CATGCCAGCCCCTGTGCAGGCTTCTTTAAGAACCTGTACATGAGTAACTTCTCAACCTTGTCCCAGCTTTaGTGTATTAAGACTATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HASPCAGFFKNLYMSNFSTLSQL*CIKTIR Trigger: TCTGATAGTCTTAATACATCAAAGCTGGGACAAGGT...TGAGAAGTTACTCATGTACAGGTTCTTAAAGAAGCCTGCACAGGGGCTGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CAA 90 bp | TGTTTATCTCTGTCCTATTCAGAACTTTCTTCATTCCCTCAATATTaGTTCAGTACCAAGTCGAGCTGTAGAGGTCCTTCCCCAATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CLSLSYSELSSFPQY*FSTKSSCRGPSPIQ Trigger: CTGAATTGGGGAAGGACCTCTACAGCTCGACTTGGTACTGAACAAATATTGAGGGAATGAAGAAAGTTCTGAATAGGACAGAGATAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CAA 90 bp | TTAGTTAAAAGGCTCAGCTCTACAGAAACAGACTGCATTTCCATATaGATTTCATCTCCAGAATCCTGGCTCTGTCTGCAGATAACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LVKRLSSTETDCISI*ISSPESWLCLQITR Trigger: TCTAGTTATCTGCAGACAGAGCCAGGATTCTGGAGATGAAATCAATATGGAAATGCAGTCTGTTTCTGTAGAGCTGAGCCTTTTAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAGGTATTTCTAGATTTTTACAAAGAGGCTGAGAGCTCAAGACTATTAACATTCTACGATGTTGTATaGGAATGGGAGGCTTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: MEVFLDFYKEAESSRLLTFYDVV*EWEAFW Trigger: CCAGAAAGCCTCCCATTCCCATACAACATCGTAGAA...TGTTAATAGTCTTGAGCTCTCAGCCTCTTTGTAAAAATCTAGAAATACCTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR GCA 90 bp | ATGGAGGTATTTCTAGATTTTTACAAAGAGGCTGAGAGCTCAAGACTATTAACACTTCATCTCTCATGGTaGCCATTTGTCCCCAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: MEVFLDFYKEAESSRLLTLHLSW*PFVPNF Trigger: AAAATTGGGGACAAATGGGCACCATGAGAGATGAAG...TGTTAATAGTCTTGAGCTCTCAGCCTCTTTGTAAAAATCTAGAAATACCTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CCA 90 bp | CCTTGTTTATCTCTGTCCTATTCAGAACTTTCTTCATTCCCTCAATATTTGTTCATGCTCTATATTTCCTaGGCTGGTTTCAGTCACAAC | + |
|
Preference number: 2 (lower is better) Translates to: PCLSLSYSELSSFPQYLFMLYIS*AGFSHN Trigger: GTTGTGACTGAAACCAGCCCAGGAAATATAGAGCAT...GAACAAATATTGAGGGAATGAAGAAAGTTCTGAATAGGACAGAGATAAACAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAGGTATTTCTAGATTTTTACAAAGAGGCTGAGAGCTCAAGACTATTAACATATGGGTCTGACCTCTaGTTAGAACACAATTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: MEVFLDFYKEAESSRLLTYGSDL*LEHNCF Trigger: GAAGCAATTGTGTTCTAACCAGAGGTCAGACCCATA...TGTTAATAGTCTTGAGCTCTCAGCCTCTTTGTAAAAATCTAGAAATACCTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGGTATTTCTAGATTTTTACAAAGAGGCTGAGAGCTCAAGACTATTAACAGGGAGTTTTACTATGTaGAGATGTTTGTGGAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: MEVFLDFYKEAESSRLLTGSFTM*RCLWSN Trigger: GTTACTCCACAAACATCTTCACATAGTAAAACTCCC...TGTTAATAGTCTTGAGCTCTCAGCCTCTTTGTAAAAATCTAGAAATACCTCCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGCTGTACATTTCAAATGGGTAATTTAGTGGCTATTCCTGGTTGTCAAAAAGAATGGGGGATGTTGTaGAGCCAAGTTTATATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSCTFQMGNLVAIPGCQKEWGML*SQVYIL Trigger: AAGAATATAAACTTGGCTTCACAACATCCCCCATTC...TTTTTGACAACCAGGAATAGCCACTAAATTACCCATTTGAAATGTACAGCTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR TCA 90 bp | TCATGGGTGAATCTTGAAAATCTTATTCTAAGCAGAGGAAGTAGTAAAGAAGGAATGATTCTATTCATATaGCAGCCAGCAGAAGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: SWVNLENLILSRGSSKEGMILFI*QPAEGT Trigger: AGTTCCTTCTGCTGGCTGTCATATGAATAGAATCAT...TCCTTCTTTACTACTTCCTCTGCTTAGAATAAGATTTTCAAGATTCACCCATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR GCA 90 bp | ATGGAGGTATTTCTAGATTTTTACAAAGAGGCTGAGAGCTCAAGACTATTAACATTTCAACCTCATTCCTaGCTTTCTTTCCTTGTGATC | + |
|
Preference number: 2 (lower is better) Translates to: MEVFLDFYKEAESSRLLTFQPHS*LSFLVI Trigger: GATCACAAGGAAAGAAAGGCAGGAATGAGGTTGAAA...TGTTAATAGTCTTGAGCTCTCAGCCTCTTTGTAAAAATCTAGAAATACCTCCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGCTGTACATTTCAAATGGGTAATTTAGTGGCTATTCCTGGTTGTCAAAAACTATATTTCCTGGGCTaGTTTCAGTCACAACTAATC | + |
|
Preference number: 2 (lower is better) Translates to: LSCTFQMGNLVAIPGCQKLYFLG*FQSQLI Trigger: GATTAGTTGTGACTGAAACCAGCCCAGGAAATATAG...TTTTTGACAACCAGGAATAGCCACTAAATTACCCATTTGAAATGTACAGCTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CAA 90 bp | GAAAATCTTATTCTAAGCAGAGGAAGTAGTAAAGAAGGACATACATaGTATGATTCTATTCATATGACAGCCAGCAGAAGGAACTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: ENLILSRGSSKEGHT*YDSIHMTASRRNSV Trigger: TACAGAGTTCCTTCTGCTGGCTGTCATATGAATAGAATCATACAATGTATGTCCTTCTTTACTACTTCCTCTGCTTAGAATAAGATTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 72 bp | CCAGCCCCTGTGCAGGCTTCTTTAAGAACCTGTACATaGGTAACTTCTCATCTTGTGGGAGATTCAGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: PAPVQASLRTCT*VTSHLVGDSDF Trigger: GAAGTCTGAATCTCCCACAAGATGAGAAGTTACTCATGTACAGGTTCTTAAAGAAGCCTGCACAGGGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 72 bp | GGCTCTACCACATTCCAATATCACAATCCTAGGGAATaGGCCTTTGATCTACGGGGGACACTCAAGATACAG | + |
|
Preference number: 3 (lower is better) Translates to: GSTTFQYHNPRE*AFDLRGTLKIQ Trigger: CTGTATCTTGAGTGTCCCCCGTAGATCAAAGGCTCATTCCCTAGGATTGTGATATTGGAATGTGGTAGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCAGCCCCTGTGCAGGCTTCTTTAAGAACCTGTACATGAGTAACTTCTCAGGTCTTAGGGAATACTaGGTCAGAAAGGGAGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HASPCAGFFKNLYMSNFSGLREY*VRKGVL Trigger: TAAAACTCCCTTTCTGACCAAGTATTCCCTAAGACC...TGAGAAGTTACTCATGTACAGGTTCTTAAAGAAGCCTGCACAGGGGCTGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CCA 72 bp | TTTGAGGATTCAATAGGGAACTCCACCTATGGAAGATaGGCACAGTCTTTGATGCTCTATATTTCCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FEDSIGNSTYGR*AQSLMLYISWA Trigger: AGCCCAGGAAATATAGAGCATCAAAGACTGTGCCCATCTTCCATAGGTGGAGTTCCCTATTGAATCCTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CCA 72 bp | GACTGCATTTCCATATTGATTTCATCTCCAGAATCCTaGCTCTGTCTGCAGATAACTAGAATCCAGTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: DCISILISSPES*LCLQITRIQSP Trigger: AGGGGACTGGATTCTAGTTATCTGCAGACAGAGCCAGGATTCTGGAGATGAAATCAATATGGAAATGCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CCA 72 bp | TGCTTCTACGATGTTGTATGGGAATGGGAGGCTTTCTaGAATGGGGGATGTTGTGAAGCCAAGTTTATATTC | + |
|
Preference number: 3 (lower is better) Translates to: CFYDVVWEWEAF*NGGCCEAKFIF Trigger: GAATATAAACTTGGCTTCACAACATCCCCCATTCCAGAAAGCCTCCCATTCCCATACAACATCGTAGAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CCA 72 bp | TCCCCTCTCACAGGAAGTGTGGTCTTAGGGAATACTTaGTCAGAAAGGGAGTTTTACTATGTGAAGATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPLTGSVVLGNT*SEREFYYVKMF Trigger: AAACATCTTCACATAGTAAAACTCCCTTTCTGACCAAGTATTCCCTAAGACCACACTTCCTGTGAGAGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGTTTATCTCTGTCCTATTCAGAACTTTCTTCATTCCCTCAATATTTGTTCTCTGCTTCTACGATGTaGTATGGGAATGGGAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PCLSLSYSELSSFPQYLFSASTM*YGNGRL Trigger: AAGCCTCCCATTCCCATACAACATCGTAGAAGCAGA...GAACAAATATTGAGGGAATGAAGAAAGTTCTGAATAGGACAGAGATAAACAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGGTGAATCTTGAAAATCTTATTCTAAGCAGAGGAAGTAGTAAAGAAGGATCTCATGGTGCCCATTaGTCCCCAATTTTGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SWVNLENLILSRGSSKEGSHGAH*SPILPF Trigger: AAAAGGCAAAATTGGGGACAAATGGGCACCATGAGA...TCCTTCTTTACTACTTCCTCTGCTTAGAATAAGATTTTCAAGATTCACCCATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR GCA 72 bp | AAAACAACCAGCACATCTCTTTTCTCCTATACTTTATaGAGCTTGTACCTTCTTGAGATAACAGCCAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: KTTSTSLFSYTL*SLYLLEITAKV Trigger: TACCTTGGCTGTTATCTCAAGAAGGTACAAGCTGCATAAAGTATAGGAGAAAAGAGATGTGCTGGTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGCTGTACATTTCAAATGGGTAATTTAGTGGCTATTCCTGGTTGTCAAAAATCATTCCCTCAATATTaGTTCAGTACCAAGTCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSCTFQMGNLVAIPGCQKSFPQY*FSTKSS Trigger: GCTCGACTTGGTACTGAACAAATATTGAGGGAATGA...TTTTTGACAACCAGGAATAGCCACTAAATTACCCATTTGAAATGTACAGCTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 72 bp | GACACTCAAGATACAGACTGGGAAACTGCGATATGCTaGAATTCATGGGTGAATCTTGAAAATCTTATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DTQDTDWETAIC*NSWVNLENLIL Trigger: TAGAATAAGATTTTCAAGATTCACCCATGAATTTCAGCATATCGCAGTTTCCCAGTCTGTATCTTGAGTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGGTGAATCTTGAAAATCTTATTCTAAGCAGAGGAAGTAGTAAAGAAGGAGACTGCATTTCCATATaGATTTCATCTCCAGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: SWVNLENLILSRGSSKEGDCISI*ISSPES Trigger: GGATTCTGGAGATGAAATCAATATGGAAATGCAGTC...TCCTTCTTTACTACTTCCTCTGCTTAGAATAAGATTTTCAAGATTCACCCATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 72 bp | CAGAAAGTTCTTTACATAATGTATCAGATAACAAGATaGATTAGCAGTCTCACTCCTAGGTGTATGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QKVLYIMYQITR*ISSLTPRCMLE Trigger: CTCAAGCATACACCTAGGAGTGAGACTGCTAATTCATCTTGTTATCTGATACATTATGTAAAGAACTTTCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 72 bp | TATTCCCGATGGAAGGTGCAATGGTTCAGTAGCTTTTaGAGACAGAAAGTTCTTTACATAATGTATCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: YSRWKVQWFSSF*RQKVLYIMYQI Trigger: TATCTGATACATTATGTAAAGAACTTTCTGTCTTCAAAAGCTACTGAACCATTGCACCTTCCATCGGGAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR TCA 72 bp | ATTTATTTACCCTTCACGAGTCCCTTCCCTAGTAATTaGAACAATATACACAGAGTCCCTGAATATTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: IYLPFTSPFPSN*NNIHRVPEYSF Trigger: AAAAGAATATTCAGGGACTCTGTGTATATTGTTTCAATTACTAGGGAAGGGACTCGTGAAGGGTAAATAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CAA 72 bp | CTTCCCCAATTCAGAAGGACCTCTGCTTCTACGATGTaGTATGGGAATGGGAGGCTTTCTGGAATGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPQFRRTSASTM*YGNGRLSGMGD Trigger: ATCCCCCATTCCAGAAAGCCTCCCATTCCCATACAACATCGTAGAAGCAGAGGTCCTTCTGAATTGGGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR TCA 90 bp | TACTGCCCTCAGAGAGACCACACTCTCAGGGACCTAAATCAATTCCAGGAGTTCAGATCCAGCGATAGCTaGCTTCACATGATGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YCPQRDHTLRDLNQFQEFRSSDS*LHMMQH Trigger: ATGCTGCATCATGTGAAGTCAGCTATCGCTGGATCT...GAACTCCTGGAATTGATTTAGGTCCCTGAGAGTGTGGTCTCTCTGAGGGCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR TCA 90 bp | TACTGCCCTCAGAGAGACCACACTCTCAGGGACCTAAATCAATTCCAGGAGTTCTCGAAGTTCTGGTCCTaGTTGGTAACATTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: YCPQRDHTLRDLNQFQEFSKFWS*LVTLPL Trigger: CAATGGCAATGTTACCAATCAGGACCAGAACTTCGA...GAACTCCTGGAATTGATTTAGGTCCCTGAGAGTGTGGTCTCTCTGAGGGCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTACTGCCCTCAGAGAGACCACACTCTCAGGGACCTAAATCAATTCCAGGAGAAAATCCCAGTTTCTaGGACAGACTGTTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVLPSERPHSQGPKSIPGENPSF*DRLFHS Trigger: GCTATGGAACAGTCTGTCCCAGAAACTGGGATTTTC...TCCTGGAATTGATTTAGGTCCCTGAGAGTGTGGTCTCTCTGAGGGCAGTACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR GCA 90 bp | ATAGTACTGCCCTCAGAGAGACCACACTCTCAGGGACCTAAATCAATTCCAGGATGTGGATCCTTGTGTTaGACAATAATCCATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVLPSERPHSQGPKSIPGCGSLC*TIIHAV Trigger: GACAGCATGGATTATTGTGCAACACAAGGATCCACA...TCCTGGAATTGATTTAGGTCCCTGAGAGTGTGGTCTCTCTGAGGGCAGTACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CAA 72 bp | AGGCTCAGCTCTACAGAAACAGACTGCATTTCCATATaGATTTCATCTCCAGAATCCTGGCTCTGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSSTETDCISI*ISSPESWLCLQ Trigger: CTGCAGACAGAGCCAGGATTCTGGAGATGAAATCAATATGGAAATGCAGTCTGTTTCTGTAGAGCTGAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR TCA 90 bp | ATAGTACTGCCCTCAGAGAGACCACACTCTCAGGGACCTAAATCAATTCCAGGAATACCAGCTATGTCCTaGAGATACTTCAGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVLPSERPHSQGPKSIPGIPAMS*RYFSFS Trigger: AGAGAAACTGAAGTATCTTCAGGACATAGCTGGTAT...TCCTGGAATTGATTTAGGTCCCTGAGAGTGTGGTCTCTCTGAGGGCAGTACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CAA 72 bp | GTCCCCTCTCACAGGAAGTGTGGTCTTAGGGAATACTaGGTCAGAAAGGGAGTTTTACTATGTGAAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPSHRKCGLREY*VRKGVLLCEDV Trigger: AACATCTTCACATAGTAAAACTCCCTTTCTGACCAAGTATTCCCTAAGACCACACTTCCTGTGAGAGGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CAA 72 bp | CTGTCCTATTCAGAACTTTCTTCATTCCCTCAATATTaGTTCAGTACCAAGTCGAGCTGTAGAGGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSYSELSSFPQY*FSTKSSCRGPS Trigger: GGAAGGACCTCTACAGCTCGACTTGGTACTGAACAAATATTGAGGGAATGAAGAAAGTTCTGAATAGGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR TCA 90 bp | CAGAGAACACATAGCTCATTGGGTACAAATGTAATTCCAGTATCTACTAGATCAAAGCATTTTCCTTGGTaGAAATCCCAGTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRTHSSLGTNVIPVSTRSKHFPW*KSQFLG Trigger: TCCCAGAAACTGGGATTTTCACCAAGGAAAATGCTT...TGATCTAGTAGATACTGGAATTACATTTGTACCCAATGAGCTATGTGTTCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGTATTTCTAGATTTTTACAAAGAGGCTGAGAGCTCAAGACTATTAACATGGAGTGTTGACAATTaGCAGTGTGGATCCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MEVFLDFYKEAESSRLLTWSVDN*QCGSLC Trigger: ACACAAGGATCCACACTGGCAATTGTCAACACTCCA...TGTTAATAGTCTTGAGCTCTCAGCCTCTTTGTAAAAATCTAGAAATACCTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| 3UTR CAA 72 bp | ATTCTAAGCAGAGGAAGTAGTAAAGAAGGACATACATaGTATGATTCTATTCATATGACAGCCAGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSRGSSKEGHT*YDSIHMTASRR Trigger: CCTTCTGCTGGCTGTCATATGAATAGAATCATACAATGTATGTCCTTCTTTACTACTTCCTCTGCTTAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR CCA 90 bp | TTGAGCTGTACATTTCAAATGGGTAATTTAGTGGCTATTCCTGGTTGTCAAAAAATACTTCAGTTTCTCTaGAGTGTTGACAATTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCTFQMGNLVAIPGCQKILQFL*SVDNCQ Trigger: CTGGCAATTGTCAACACTCCAGAGAAACTGAAGTAT...TTTTTGACAACCAGGAATAGCCACTAAATTACCCATTTGAAATGTACAGCTCAA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGTATTTCTAGATTTTTACAAAGAGGCTGAGAGCTCAAGACTATTAACATTGCACAATAATCCATaGTGTCTTTCCAAGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: MEVFLDFYKEAESSRLLTLHNNP*CLSKVI Trigger: AATCACCTTGGAAAGACAGCATGGATTATTGTGCAA...TGTTAATAGTCTTGAGCTCTCAGCCTCTTTGTAAAAATCTAGAAATACCTCCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR CAA 90 bp | GTAGAGGTCCTTCCCCAATTCAGAAGGACCTCTGCTTCTACGATGTTGTATGGGGTGTGGATCCTTGTGTaGCACAATAATCCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VEVLPQFRRTSASTMLYGVWILV*HNNPCC Trigger: ACAGCATGGATTATTGTGCAACACAAGGATCCACAC...CCCATACAACATCGTAGAAGCAGAGGTCCTTCTGAATTGGGGAAGGACCTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR CAA 90 bp | GCTTCTACGATGTTGTATGGGAATGGGAGGCTTTCTGGAATGGGGGATGTTGTGTTGAACACAGAGTTGTaGATCCAGCGCCACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASTMLYGNGRLSGMGDVVLNTEL*IQRHFF Trigger: GAAAAAGTGGCGCTGGATCAACAACTCTGTGTTCAA...CACAACATCCCCCATTCCAGAAAGCCTCCCATTCCCATACAACATCGTAGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGCCCCTGTGCAGGCTTCTTTAAGAACCTGTACATGAGTAACTTCTCAAGTTTCTCTGGAGTGTaGACAATTGCCAGTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HASPCAGFFKNLYMSNFSSFSGV*TIASVD Trigger: ATCCACACTGGCAATTGTCAACACTCCAGAGAAACT...TGAGAAGTTACTCATGTACAGGTTCTTAAAGAAGCCTGCACAGGGGCTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGGGAGCAAAATGAAAGGGCTGAGGATAGTACTGCCCTCAGAGAGACCATTGGTAACATTGCCATaGAACACAGAGTTGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: WLGSKMKGLRIVLPSERPLVTLP*NTELLI Trigger: GATCAACAACTCTGTGTTCAATGGCAATGTTACCAA...TGGTCTCTCTGAGGGCAGTACTATCCTCAGCCCTTTCATTTTGCTCCCAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS TCA 90 bp | TCATTTGGCATTCATTTCGCAGATCCAGCGATAGCTGACTTCACATaGTGCAGCATCATATGTCTTCGTCAGACCTATAGTGACACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFGIHFADPAIADFT*CSIICLRQTYSDTV Trigger: GACTGTGTCACTATAGGTCTGACGAAGACATATGATGCTGCATCATGTGAAGTCAGCTATCGCTGGATCTGCGAAATGAATGCCAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101491.11 ENSMUST00000129948.9 ENSMUST00000177178.2 |
||
| CDS TCA 90 bp | CAATACCAGCTATGTCCTGAAGATACTTCAGTTTCTCTGGAGTGTTaGCAATTGCCAGTGTGGATCCTTGTGTTGCACAATAATCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QYQLCPEDTSVSLEC*QLPVWILVLHNNPC Trigger: GCATGGATTATTGTGCAACACAAGGATCCACACTGGCAATTGTCAACACTCCAGAGAAACTGAAGTATCTTCAGGACATAGCTGGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101491.11 ENSMUST00000129948.9 |
||
| CDS GCA 90 bp | ACCAGCTATGTCCTGAAGATACAGTTTCTCTGGAGTGTTGACAATTaGCAGTGTGGATCCTTGTGTTGCACAATAATCCATGCTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSYVLKIQFLWSVDN*QCGSLCCTIIHAVF Trigger: AAAGACAGCATGGATTATTGTGCAACACAAGGATCCACACTGGCAATTGTCAACACTCCAGAGAAACTGTATCTTCAGGACATAGCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177178.2 |
||
| CDS GCA 90 bp | AGCTATGTCCTGAAGATACTTCAGTTTCTCTGGAGTGTTGACAATTaGCAGTGTGGATCCTTGTGTTGCACAATAATCCATGCTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SYVLKILQFLWSVDN*QCGSLCCTIIHAVF Trigger: AAAGACAGCATGGATTATTGTGCAACACAAGGATCCACACTGGCAATTGTCAACACTCCAGAGAAACTGAAGTATCTTCAGGACATAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101491.11 ENSMUST00000129948.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGTGTGGTCTTAGGGAATACTTGGTCAGAAAGGGAGTTTTACTATGTGAAGGTCATTCCAACAACTTaGATCACTACTACGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSVVLGNTWSEREFYYVKVIPTT*ITTTIS Trigger: GCTTATCGTAGTAGTGATCAAAGTTGTTGGAATGAC...CTTCACATAGTAAAACTCCCTTTCTGACCAAGTATTCCCTAAGACCACACTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS-3UTR CAA 90 bp | ATGGAGGTATTTCTAGATTTTTACAAAGAGGCTGAGAGCTCAAGACTATTAACACCATTGAACACAGAGTaGTTGATCCAGCGCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: MEVFLDFYKEAESSRLLTPLNTE*LIQRHF Trigger: AAAGTGGCGCTGGATCAACAACTCTGTGTTCAATGG...TGTTAATAGTCTTGAGCTCTCAGCCTCTTTGTAAAAATCTAGAAATACCTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101491.11 |
||
| CDS TCA 72 bp | AGGCATGGTACTTTCGTCATTTCTCCCAAAGATCTGTaGGACATTCTGCACACTAGTGGTTCCGTAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RHGTFVISPKDL*DILHTSGSVAL Trigger: GAGAGCTACGGAACCACTAGTGTGCAGAATGTCTCACAGATCTTTGGGAGAAATGACGAAAGTACCATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129948.9 |
||
| CDS TCA 72 bp | GTCAGACCTATAGTGACACAGTCGAAGTTCTGGTCCTaGTTGGTAACATTGCCATTGAACACAGAGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VRPIVTQSKFWS*LVTLPLNTELL Trigger: CAACAACTCTGTGTTCAATGGCAATGTTACCAATCAGGACCAGAACTTCGACTGTGTCACTATAGGTCTGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101491.11 ENSMUST00000129948.9 ENSMUST00000177178.2 |
||
| CDS TCA 72 bp | CAGCTATGTCCTGAAGATACAGTTTCTCTGGAGTGTTaGCAATTGCCAGTGTGGATCCTTGTGTTGCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: QLCPEDTVSLEC*QLPVWILVLHN Trigger: ATTGTGCAACACAAGGATCCACACTGGCAATTGTCAACACTCCAGAGAAACTGTATCTTCAGGACATAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177178.2 |
||
| CDS CAA 72 bp | TTTCTCTGGAGTGTTGACAATTGCCAGTGTGGATCCTaGTGTTGCACAATAATCCATGCTGTCTTTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLWSVDNCQCGS*CCTIIHAVFPR Trigger: CCTTGGAAAGACAGCATGGATTATTGTGCAACACAAGGATCCACACTGGCAATTGTCAACACTCCAGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101491.11 ENSMUST00000129948.9 ENSMUST00000177178.2 |
||
| CDS TCA 72 bp | CTATGTCCTGAAGATACTTCAGTTTCTCTGGAGTGTTaGCAATTGCCAGTGTGGATCCTTGTGTTGCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: LCPEDTSVSLEC*QLPVWILVLHN Trigger: ATTGTGCAACACAAGGATCCACACTGGCAATTGTCAACACTCCAGAGAAACTGAAGTATCTTCAGGACATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101491.11 ENSMUST00000129948.9 |
||
| CDS GCA 72 bp | GTCCTGAAGATACAGTTTCTCTGGAGTGTTGACAATTaGCAGTGTGGATCCTTGTGTTGCACAATAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VLKIQFLWSVDN*QCGSLCCTIIH Trigger: ATGGATTATTGTGCAACACAAGGATCCACACTGGCAATTGTCAACACTCCAGAGAAACTGTATCTTCAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177178.2 |
||
| CDS GCA 72 bp | CTGAAGATACTTCAGTTTCTCTGGAGTGTTGACAATTaGCAGTGTGGATCCTTGTGTTGCACAATAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LKILQFLWSVDN*QCGSLCCTIIH Trigger: ATGGATTATTGTGCAACACAAGGATCCACACTGGCAATTGTCAACACTCCAGAGAAACTGAAGTATCTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101491.11 ENSMUST00000129948.9 |
||
| CDS TCA 72 bp | TTGTGTTGCACAATAATCCATGCTGTCTTTCCAAGGTaGTTCGGAGAAGGAGAAGAAAAAGCATTTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LCCTIIHAVFPR*FGEGEEKAFSL Trigger: CAAGGAAAATGCTTTTTCTTCTCCTTCTCCGAATCACCTTGGAAAGACAGCATGGATTATTGTGCAACACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101491.11 ENSMUST00000129948.9 ENSMUST00000177178.2 |
||