Pregenerated sensors for CLEC4G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074491Ensembl transcript IDs: ENSMUST00000058040.7, ENSMUST00000062037.7, ENSMUST00000160527.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAAGCCTGCTTGCTGCAGGGATTTCCTGACCGTCTTCCCAGGCTaGAGCTATAGGCAGGCTGCATGTCCATTCGGTTCTTACGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: HKPACCRDFLTVFPG*SYRQAACPFGSYVG Trigger: ACCCACGTAAGAACCGAATGGACATGCAGCCTGCCTATAGCTCCAGCCTGGGAAGACGGTCAGGAAATCCCTGCAGCAAGCAGGCTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CCA 90 bp | GAGAGTGTTGTGACGGCCAGGTTGGTACATGCAGGAAGCCCCATCTaGCTTCCAGGGGCTCTAGGATTCACTAACTCAGCTGCAGATAAG | + |
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Preference number: 1 (lower is better) Translates to: ESVVTARLVHAGSPI*LPGALGFTNSAADK Trigger: CTTATCTGCAGCTGAGTTAGTGAATCCTAGAGCCCCTGGAAGCCAGATGGGGCTTCCTGCATGTACCAACCTGGCCGTCACAACACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR GCA 90 bp | CTTGACTTTCCAGGAAGTCTCTCCTACACTGTAGTCTCACAAGCCTaGTTGCTGCAGGGATTTCCTGACCGTCTTCCCAGGCTGGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: LDFPGSLSYTVVSQA*LLQGFPDRLPRLEL Trigger: TAGCTCCAGCCTGGGAAGACGGTCAGGAAATCCCTGCAGCAAGCAGGCTTGTGAGACTACAGTGTAGGAGAGACTTCCTGGAAAGTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR GCA 90 bp | CTGGGAAGAAGAAGCTGGGATGCAAGGGGGTTTCCTGGGATCGGTTaGTTTGTCCTATCTCAAGGCCATTTCCAGGGAGAGTGTTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LGRRSWDARGFPGIG*FVLSQGHFQGECCD Trigger: GTCACAACACTCTCCCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTGCATCCCAGCTTCTTCTTCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CCA 90 bp | CATGTGCTTCCTGGGAAGAAGAAGCTGGGATGCAAGGGGGTTTCCTaGGATCGGTTGCTTTGTCCTATCTCAAGGCCATTTCCAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: HVLPGKKKLGCKGVS*DRLLCPISRPFPGR Trigger: TCTCCCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTGCATCCCAGCTTCTTCTTCCCAGGAAGCACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR TCA 90 bp | GGACATCTTATTGATGGCCACACCACTAAAGAAAGTGGCTCTCCTTaGGACAACATGGACTGCCCATGGATCCTAGGAAGGAGCAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: GHLIDGHTTKESGSP*DNMDCPWILGRSRA Trigger: GGCCCTGCTCCTTCCTAGGATCCATGGGCAGTCCATGTTGTCTCAAGGAGAGCCACTTTCTTTAGTGGTGTGGCCATCAATAAGATGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| 3UTR CCA 90 bp | GGGGCTCTAGGATTCACTAACTCAGCTGCAGATAAGGTGTTCATATaGCCCTCTGGGGAGCCGCTGTGGAATCATTTCTTAGGAAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: GALGFTNSAADKVFI*PSGEPLWNHFLGSY Trigger: ATAGCTTCCTAAGAAATGATTCCACAGCGGCTCCCCAGAGGGCCATATGAACACCTTATCTGCAGCTGAGTTAGTGAATCCTAGAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CCA 90 bp | CAGGAAGATGGAACAACTCCAACACTGTGTCTAGGAAACAGGCAGTaGATCAGACCATCAGGGTTTAGAGCAGTGATTTTGAGACTGACA | + |
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Preference number: 1 (lower is better) Translates to: QEDGTTPTLCLGNRQ*IRPSGFRAVILRLT Trigger: TGTCAGTCTCAAAATCACTGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGGAGTTGTTCCATCTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| 3UTR TCA 90 bp | CTTCCTCTTGCCACATCTACTTTCACATCTTTTTCAGTGATCCAGTaGGTTTCAGTGGGTTCCGACAAGAGCATAGATGAGGGTTATCTC | + |
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Preference number: 1 (lower is better) Translates to: LPLATSTFTSFSVIQ*VSVGSDKSIDEGYL Trigger: GAGATAACCCTCATCTATGCTCTTGTCGGAACCCACTGAAACTCACTGGATCACTGAAAAAGATGTGAAAGTAGATGTGGCAAGAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAAGCCCTGCATCTACACGCACACAGCCAGCGGCTACATGCACACAGCCAGCAGGAAGCCCCATCTaGCTTCCAGGGGCTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: RGSPASTRTQPAATCTQPAGSPI*LPGALG Trigger: TCCTAGAGCCCCTGGAAGCCAGATGGGGCTTCCTGC...TGGCTGTGTGCATGTAGCCGCTGGCTGTGTGCGTGTAGATGCAGGGCTTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CAA 90 bp | TCCTATCTCAAGGCCATTTCCAGGGAGAGTGTTGTGACGGCCAGGTaGGTACATGCAGGAAGCCCCATCTGGCTTCCAGGGGCTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: SYLKAISRESVVTAR*VHAGSPIWLPGALG Trigger: TCCTAGAGCCCCTGGAAGCCAGATGGGGCTTCCTGCATGTACCAACCTGGCCGTCACAACACTCTCCCTGGAAATGGCCTTGAGATAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGGGGGTTTCCTGGGATCGGTTGCTTTGTCCTATCTCAAGGCCATTTCCAGGGCTGCAGGGATTTCCTaGCCGTCTTCCCAGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: QGGFLGSVALSYLKAISRAAGIS*PSSQAG Trigger: TCCAGCCTGGGAAGACGGTCAGGAAATCCCTGCAGC...CCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAATGCTACCAAGAGCTTGAGGAGAGACGCCAGTCTGCCTGTTCGGACCCCTGTTCATATGGCCCTCTaGGGAGCCGCTGTGGAATCA | + |
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Preference number: 2 (lower is better) Translates to: ENATKSLRRDASLPVRTPVHMAL*GAAVES Trigger: TGATTCCACAGCGGCTCCCCAGAGGGCCATATGAAC...AGGGGTCCGAACAGGCAGACTGGCGTCTCTCCTCAAGCTCTTGGTAGCATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CAA 90 bp | GAAGAAGAAGCTGGGATGCAAGGGGGTTTCCTGGGATCGGTTGCTTaGTCCTATCTCAAGGCCATTTCCAGGGAGAGTGTTGTGACGGCC | + |
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Preference number: 2 (lower is better) Translates to: EEEAGMQGGFLGSVA*SYLKAISRESVVTA Trigger: GGCCGTCACAACACTCTCCCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTGCATCCCAGCTTCTTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR-3UTR GCA 90 bp | ACACCACTAAAGAAAGTGGCTCTCCTTGAGACAACATGGACTGCCCATGGATCCTCTCACAAGCCTGCTTaGTGCAGGGATTTCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: TPLKKVALLETTWTAHGSSHKPA*CRDFLT Trigger: GGTCAGGAAATCCCTGCAGCAAGCAGGCTTGTGAGA...GGATCCATGGGCAGTCCATGTTGTCTCAAGGAGAGCCACTTTCTTTAGTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR-3UTR CCA 90 bp | TATATAATGTATTTATATCACAATCACTCCACTGCCCTCTGGTTTCTCTCCTGCACCGTCTTCCCAGGCTaGAGCTATAGGCAGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: YIMYLYHNHSTALWFLSCTVFPG*SYRQAA Trigger: TGCAGCCTGCCTATAGCTCCAGCCTGGGAAGACGGT...GCAGGAGAGAAACCAGAGGGCAGTGGAGTGATTGTGATATAAATACATTATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCTCACCCCCTTCCTCTTGCCACATCTACTTTCACATCTTTTTCAGTGATTCACATCTTTTTCAGTaGTCCAGTGAGTTTCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SLSPPSSCHIYFHIFFSDSHLFQ*SSEFQW Trigger: CCACTGAAACTCACTGGATCACTGAAAAAGATGTGA...ATCACTGAAAAAGATGTGAAAGTAGATGTGGCAAGAGGAAGGGGGTGAGAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGTATATAATGTATTTATATCACAATCACTCCACTGCCCTCTGGTTTCTCCTCTGGTTTCTCTCCTaGTCCCTCTCACCCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: IVYIMYLYHNHSTALWFLLWFLS*SLSPPS Trigger: GGAAGGGGGTGAGAGGGAGCAGGAGAGAAACCAGAG...GAGAAACCAGAGGGCAGTGGAGTGATTGTGATATAAATACATTATATACACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGACTGGTCAGGCTGAGTaGCTCTTATTAATGGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: FKHLLMLSLCVKKSPSQRTGQAE*LLLMVH Trigger: ATGCACCATTAATAAGAGCCACTCAGCCTGACCAGT...CCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| 3UTR GCA 72 bp | TTCCAGGGAGAGTGTTGTGACGGCCAGGTTGGTACATaGAGGAAGCCCCATCTGGCTTCCAGGGGCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: FQGECCDGQVGT*RKPHLASRGSR Trigger: CCTAGAGCCCCTGGAAGCCAGATGGGGCTTCCTGCATGTACCAACCTGGCCGTCACAACACTCTCCCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGGAAGCCCTGCATCTACACGCACACAGCCAGCGGCTACATGCACACAGCCAAATGCTACCAAGAGCTaGAGGAGAGACGCCAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: RGSPASTRTQPAATCTQPNATKS*RRDASL Trigger: CAGACTGGCGTCTCTCCTCAAGCTCTTGGTAGCATT...TGGCTGTGTGCATGTAGCCGCTGGCTGTGTGCGTGTAGATGCAGGGCTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR TCA 72 bp | TGTAGTCTCACAAGCCTGCTTGCTGCAGGGATTTCCTaGCCGTCTTCCCAGGCTGGAGCTATAGGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: CSLTSLLAAGIS*PSSQAGAIGRL Trigger: CAGCCTGCCTATAGCTCCAGCCTGGGAAGACGGTCAGGAAATCCCTGCAGCAAGCAGGCTTGTGAGACTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CCA 72 bp | GCTTGCTGCAGGGATTTCCTGACCGTCTTCCCAGGCTaGAGCTATAGGCAGGCTGCATGTCCATTCGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: ACCRDFLTVFPG*SYRQAACPFGS Trigger: AGAACCGAATGGACATGCAGCCTGCCTATAGCTCCAGCCTGGGAAGACGGTCAGGAAATCCCTGCAGCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CCA 72 bp | GTGACGGCCAGGTTGGTACATGCAGGAAGCCCCATCTaGCTTCCAGGGGCTCTAGGATTCACTAACTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: VTARLVHAGSPI*LPGALGFTNSA Trigger: AGCTGAGTTAGTGAATCCTAGAGCCCCTGGAAGCCAGATGGGGCTTCCTGCATGTACCAACCTGGCCGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR GCA 72 bp | CCAGGAAGTCTCTCCTACACTGTAGTCTCACAAGCCTaGTTGCTGCAGGGATTTCCTGACCGTCTTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PGSLSYTVVSQA*LLQGFPDRLPR Trigger: CCTGGGAAGACGGTCAGGAAATCCCTGCAGCAAGCAGGCTTGTGAGACTACAGTGTAGGAGAGACTTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR GCA 72 bp | GTGTGGGGACGGAGGGATGAATCTGATCAGGGAAAATaGTACCAAGAGCTTGAGGAGAGACGCCAGTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: VWGRRDESDQGK*YQELEERRQSA Trigger: GGCAGACTGGCGTCTCTCCTCAAGCTCTTGGTAGCATTTTCCCTGATCAGATTCATCCCTCCGTCCCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR TCA 72 bp | TGTCCTATCTCAAGGCCATTTCCAGGGAGAGTGTTGTaGCGGCCAGGTTGGTACATGCAGGAAGCCCCATCT | + |
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Preference number: 3 (lower is better) Translates to: CPISRPFPGRVL*RPGWYMQEAPS Trigger: AGATGGGGCTTCCTGCATGTACCAACCTGGCCGTCACAACACTCTCCCTGGAAATGGCCTTGAGATAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR GCA 72 bp | AGAAGCTGGGATGCAAGGGGGTTTCCTGGGATCGGTTaGTTTGTCCTATCTCAAGGCCATTTCCAGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: RSWDARGFPGIG*FVLSQGHFQGE Trigger: CTCTCCCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTGCATCCCAGCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CCA 72 bp | CCTGGGAAGAAGAAGCTGGGATGCAAGGGGGTTTCCTaGGATCGGTTGCTTTGTCCTATCTCAAGGCCATTT | + |
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Preference number: 3 (lower is better) Translates to: PGKKKLGCKGVS*DRLLCPISRPF Trigger: AAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTGCATCCCAGCTTCTTCTTCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGGAGCAGGGCCCCACCAGTTCCTCTCCCAGCAACAGTTACGATGCCTACCGTTAGGAAGCTATTTCTaGACTTTCCAGGAAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: EGAGPHQFLSQQQLRCLPLGSYF*TFQEVS Trigger: AGAGACTTCCTGGAAAGTCAAGAAATAGCTTCCTAA...CGGTAGGCATCGTAACTGTTGCTGGGAGAGGAACTGGTGGGGCCCTGCTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCTCACCCCCTTCCTCTTGCCACATCTACTTTCACATCTTTTTCAGTGATGTCTCACAAGCCTGCTaGCTGCAGGGATTTCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: SLSPPSSCHIYFHIFFSDVSQAC*LQGFPD Trigger: GTCAGGAAATCCCTGCAGCAAGCAGGCTTGTGAGAC...ATCACTGAAAAAGATGTGAAAGTAGATGTGGCAAGAGGAAGGGGGTGAGAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR TCA 72 bp | ATTGATGGCCACACCACTAAAGAAAGTGGCTCTCCTTaGGACAACATGGACTGCCCATGGATCCTAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: IDGHTTKESGSP*DNMDCPWILGR Trigger: CCTTCCTAGGATCCATGGGCAGTCCATGTTGTCTCAAGGAGAGCCACTTTCTTTAGTGGTGTGGCCATCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| 3UTR CCA 72 bp | GGATTCACTAACTCAGCTGCAGATAAGGTGTTCATATaGCCCTCTGGGGAGCCGCTGTGGAATCATTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: GFTNSAADKVFI*PSGEPLWNHFL Trigger: TAAGAAATGATTCCACAGCGGCTCCCCAGAGGGCCATATGAACACCTTATCTGCAGCTGAGTTAGTGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CCA 72 bp | GGAACAACTCCAACACTGTGTCTAGGAAACAGGCAGTaGATCAGACCATCAGGGTTTAGAGCAGTGATTTTG | + |
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Preference number: 3 (lower is better) Translates to: GTTPTLCLGNRQ*IRPSGFRAVIL Trigger: CAAAATCACTGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGGAGTTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| 3UTR GCA 72 bp | AGTGTATATAATGTATTTATATCACAATCACTCCACTaGCCTCTGGTTTCTCTCCTGCTCCCTCTCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: SVYNVFISQSLH*PLVSLLLPLTP Trigger: GGGGGTGAGAGGGAGCAGGAGAGAAACCAGAGGGCAGTGGAGTGATTGTGATATAAATACATTATATACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| 3UTR TCA 72 bp | GCCACATCTACTTTCACATCTTTTTCAGTGATCCAGTaGGTTTCAGTGGGTTCCGACAAGAGCATAGATGAG | + |
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Preference number: 3 (lower is better) Translates to: ATSTFTSFSVIQ*VSVGSDKSIDE Trigger: CTCATCTATGCTCTTGTCGGAACCCACTGAAACTCACTGGATCACTGAAAAAGATGTGAAAGTAGATGTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| 3UTR TCA 72 bp | TTCCTCTTGCCACATCTACTTTCACATCTTTTTCAGTaGTCCAGTGAGTTTCAGTGGGTTCCGACAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: FLLPHLLSHLFQ*SSEFQWVPTRA Trigger: TGCTCTTGTCGGAACCCACTGAAACTCACTGGATCACTGAAAAAGATGTGAAAGTAGATGTGGCAAGAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGTATATAATGTATTTATATCACAATCACTCCACTGCCCTCTGGTTTCTCTCAGAAAGTGGCTCTCCTaGAGACAACATGGACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: SVYNVFISQSLHCPLVSLRKWLS*RQHGLP Trigger: GGGCAGTCCATGTTGTCTCAAGGAGAGCCACTTTCT...GAGAGAAACCAGAGGGCAGTGGAGTGATTGTGATATAAATACATTATATACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058040.7 ENSMUST00000160527.8 |
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| CDS-3UTR CCA 90 bp | GAAAATGCTACCAAGAGCTTGAGGAGAGACGCCAGTCTGCCTGTTCGGACCCCTTCTTGCTTGCAGAGCTaGGCCATCTCCCCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ENATKSLRRDASLPVRTPSCLQS*AISPRP Trigger: GGGCCTGGGGGAGATGGCCCAGCTCTGCAAGCAAGA...AGGGGTCCGAACAGGCAGACTGGCGTCTCTCCTCAAGCTCTTGGTAGCATTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| 3UTR CAA 72 bp | AAGGCCATTTCCAGGGAGAGTGTTGTGACGGCCAGGTaGGTACATGCAGGAAGCCCCATCTGGCTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KAISRESVVTAR*VHAGSPIWLPG Trigger: CCCTGGAAGCCAGATGGGGCTTCCTGCATGTACCAACCTGGCCGTCACAACACTCTCCCTGGAAATGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| CDS-3UTR GCA 90 bp | CCATGGATCCTAGGAAGGAGCAGGGCCCCACCAGTTCCTCTCCCAGCAACAGTTAAGAAGAAGCTGGGATaGAAGGGGGTTTCCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PWILGRSRAPPVPLPATVKKKLG*KGVSWD Trigger: ATCCCAGGAAACCCCCTTGCATCCCAGCTTCTTCTT...AACTGTTGCTGGGAGAGGAACTGGTGGGGCCCTGCTCCTTCCTAGGATCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058040.7 |
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| CDS-3UTR GCA 90 bp | GAAAATGCTACCAAGAGCTTGAGGAGAGACGCCAGTCTGCCTGTTCGGACCCCTTCAGGTTCTCTTGCTTaGAGAGCTGGGCCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ENATKSLRRDASLPVRTPSGSLA*RAGPSP Trigger: GGGAGATGGCCCAGCTCTGCAAGCAAGAGAACCTGA...AGGGGTCCGAACAGGCAGACTGGCGTCTCTCCTCAAGCTCTTGGTAGCATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| CDS-3UTR CCA 90 bp | CCAACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCAGTCCTCAGCAGGTCCTaGTGGCTGAGCAGCACCCTG | + |
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Preference number: 4 (lower is better) Translates to: PTLCLGNRQWIRPSGFRAVLSRS*WLSSTL Trigger: CAGGGTGCTGCTCAGCCACCAGGACCTGCTGAGGAC...TGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| 3UTR CAA 72 bp | GGAAGTCTCTCCTACACTGTAGTCTCACAAGCCTGCTaGCTGCAGGGATTTCCTGACCGTCTTCCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GSLSYTVVSQAC*LQGFPDRLPRL Trigger: CAGCCTGGGAAGACGGTCAGGAAATCCCTGCAGCAAGCAGGCTTGTGAGACTACAGTGTAGGAGAGACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| CDS-3UTR CCA 90 bp | GGTTCCGACAAGAGCATAGATGAGGGTTATCTCCAGGGGTGTGGACATCTTATTGCCTGTTCGGACCCCTaGGGCTTCCCCATGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GSDKSIDEGYLQGCGHLIACSDP*GFPMCF Trigger: GAAGCACATGGGGAAGCCCCAGGGGTCCGAACAGGC...AATAAGATGTCCACACCCCTGGAGATAACCCTCATCTATGCTCTTGTCGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058040.7 |
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| 3UTR CAA 72 bp | GCTGGGATGCAAGGGGGTTTCCTGGGATCGGTTGCTTaGTCCTATCTCAAGGCCATTTCCAGGGAGAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: AGMQGGFLGSVA*SYLKAISRESV Trigger: AACACTCTCCCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTGCATCCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| CDS-3UTR GCA 90 bp | TCAGTGGGTTCCGACAAGAGCATAGATGAGGGTTATCTCCAGGGGTGTGGACATTGGGGCTTCCCCATGTaGTTCCTGGGAAGAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SVGSDKSIDEGYLQGCGHWGFPM*FLGRRS Trigger: GCTTCTTCTTCCCAGGAAGCACATGGGGAAGCCCCA...ATGTCCACACCCCTGGAGATAACCCTCATCTATGCTCTTGTCGGAACCCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058040.7 |
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| CDS-3UTR GCA 90 bp | CAAGGGGGTTTCCTGGGATCGGTTGCTTTGTCCTATCTCAAGGCCATTTCCAGGGTTGAGGTGGCGAACTaGCCTCAGACCCAACCAATA | + |
|
Preference number: 4 (lower is better) Translates to: QGGFLGSVALSYLKAISRVEVAN*PQTQPI Trigger: TATTGGTTGGGTCTGAGGGCAGTTCGCCACCTCAAC...CCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
||
| 3UTR CAA 72 bp | AAGAAGCTGGGATGCAAGGGGGTTTCCTGGGATCGGTaGCTTTGTCCTATCTCAAGGCCATTTCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKLGCKGVSWDR*LCPISRPFPGR Trigger: TCTCCCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTGCATCCCAGCTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
||
| CDS-3UTR GCA 90 bp | CCAACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCACTTGACAGCTTCCAGTaGCTGGAACAGCTCACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTLCLGNRQWIRPSGFRALDSFQ*LEQLTA Trigger: CGCAGTGAGCTGTTCCAGGCACTGGAAGCTGTCAAG...TGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR GCA 90 bp | ATCAGGGAAAATGCTACCAAGAGCTTGAGGAGAGACGCCAGTCTGCCTGTTCGGTCCACAGTAGCTTTGTaGTGTATCCCATGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRENATKSLRRDASLPVRSTVAL*CIPCGL Trigger: CAGGCCACATGGGATACAGCACAAAGCTACTGTGGA...CCGAACAGGCAGACTGGCGTCTCTCCTCAAGCTCTTGGTAGCATTTTCCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCCGACAAGAGCATAGATGAGGGTTATCTCCAGGGGTGTGGACATCTTATTGCTAGGGCTCCTGAGTaGCAAGAGTCTGGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSDKSIDEGYLQGCGHLIARAPE*QESGLC Trigger: ACACAGCCCAGACTCTTGCCACTCAGGAGCCCTAGC...AATAAGATGTCCACACCCCTGGAGATAACCCTCATCTATGCTCTTGTCGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058040.7 |
||
| CDS-3UTR CCA 90 bp | CCAACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCAGAGCCCATAGAACTGTaGCCACCAGCAGAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTLCLGNRQWIRPSGFRAEPIEL*PPAEPR Trigger: TCTTGGCTCTGCTGGTGGCCACAGTTCTATGGGCTC...TGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR GCA 90 bp | CCAACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCACGGAGCAGCAATTCCTaGAGGCTCCGATATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLCLGNRQWIRPSGFRARSSNS*RLRYHP Trigger: AGGATGATATCGGAGCCTGCAGGAATTGCTGCTCCG...TGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR GCA 90 bp | CCAACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCAGTTGAGGTGGCGAACTaGCCTCAGACCCAACCAATA | + |
|
Preference number: 4 (lower is better) Translates to: PTLCLGNRQWIRPSGFRAVEVAN*PQTQPI Trigger: TATTGGTTGGGTCTGAGGGCAGTTCGCCACCTCAAC...TGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR GCA 90 bp | ACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCAGTGTTCCACAGCCCCGAGTaGAGCATCATGATACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLCLGNRQWIRPSGFRAVFHSPE*SIMIQS Trigger: GGACTGTATCATGATGCTGCACTCGGGGCTGTGGAA...CACTGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CCA 90 bp | CAAGGGGGTTTCCTGGGATCGGTTGCTTTGTCCTATCTCAAGGCCATTTCCAGGGTGCTGTATCCCATGTaGCCTGTGTCTCAGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGGFLGSVALSYLKAISRVLYPM*PVSQRN Trigger: ATTTCTCTGAGACACAGGCCACATGGGATACAGCAC...CCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
||
| CDS-3UTR GCA 90 bp | CCAACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCATGGGTCACACGCTCTTaGAGTTCTTTCAGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTLCLGNRQWIRPSGFRAWVTRS*SSFRML Trigger: GAGCATCCTGAAAGAACTGCAAGAGCGTGTGACCCA...TGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR GCA 90 bp | CCAACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCATCCACAGTAGCTTTGTaGTGTATCCCATGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLCLGNRQWIRPSGFRASTVAL*CIPCGL Trigger: CAGGCCACATGGGATACAGCACAAAGCTACTGTGGA...TGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CCA 90 bp | ACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCAGTGTCTCCAGAGTTCCAGTaGCTGAAGTTGAGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLCLGNRQWIRPSGFRAVSPEFQ*LKLSEA Trigger: AGCCTCACTCAACTTCAGCCACTGGAACTCTGGAGA...CACTGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CCA 90 bp | TTCAAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGCTCAGCAGGTCCTGGTaGCTGAGCAGCACCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKHLLMLSLCVKKSPSQRLSRSW*LSSTLS Trigger: GCTCAGGGTGCTGCTCAGCCACCAGGACCTGCTGAG...CCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS-3UTR TCA 90 bp | CATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTAAAAAGCTGTTCTGGCGCTTaGCAGCTTCCAGTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLMLSLCVKKSPSQRVKSCSGA*QLPVPG Trigger: TCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCT...TTTTACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| 3UTR CAA 72 bp | GTGGCTCTTATTAATGGTGCATTAGGAAAAACAGCCTaGGTAGTGGGCTCAAGGAATAGGAGCCACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VALINGALGKTA*VVGSRNRSHPS Trigger: AGAAGGGTGGCTCCTATTCCTTGAGCCCACTACCAAGGCTGTTTTTCCTAATGCACCATTAATAAGAGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS-3UTR GCA 90 bp | AGGGGTGTGGACATCTTATTGATGGCCACACCACTAAAGAAAGTGGCTCTCCTTCTTTCTCTCAGCTCCTaGAAATCAGAGATATCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RGVDILLMATPLKKVALLLSLSS*KSEISM Trigger: CATAGATATCTCTGATTTGCAGGAGCTGAGAGAAAG...AAGGAGAGCCACTTTCTTTAGTGGTGTGGCCATCAATAAGATGTCCACACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058040.7 |
||
| CDS-3UTR CCA 90 bp | AAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTAGCTTTAGCCAAGTCCTaGGTCACACGCTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHLLMLSLCVKKSPSQRVALAKS*VTRSCS Trigger: ACTGCAAGAGCGTGTGACCCAGGACTTGGCTAAAGC...TACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS-3UTR CCA 90 bp | AAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTAGTCCTCTGGAATCATTaGGCTCTCCAGAGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHLLMLSLCVKKSPSQRVVLWNH*ALQSSS Trigger: ACTGGAACTCTGGAGAGCCCAATGATTCCAGAGGAC...TACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CCA 90 bp | CATAGTGTATATAATGTATTTATATCACAATCACTCCACTGCCCTCTGGTTTCTTCCCCATGTGCTTCCTaGGAAGAAGAAGCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HSVYNVFISQSLHCPLVSSPCAS*EEEAGM Trigger: CATCCCAGCTTCTTCTTCCCAGGAAGCACATGGGGA...AGAAACCAGAGGGCAGTGGAGTGATTGTGATATAAATACATTATATACACTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058040.7 |
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| CDS-3UTR CCA 90 bp | CATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTAAAAGTGCTGTATCCCATGTaGCCTGTGTCTCAGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLLMLSLCVKKSPSQRVKVLYPM*PVSQRN Trigger: ATTTCTCTGAGACACAGGCCACATGGGATACAGCAC...TTTTACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR GCA 90 bp | TTCAAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGCCTCTTCAATTGCACTaGCCAGCTTGTTGTATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKHLLMLSLCVKKSPSQRPLQLH*PACCIH Trigger: GTGAATACAACAAGCTGGGCAGTGCAATTGAAGAGG...CCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR GCA 90 bp | CATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTAAAATTCAGGATGCTCTCCTaGTCCATCAACTTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLMLSLCVKKSPSQRVKFRMLS*SINFAC Trigger: ACAAGCAAAGTTGATGGAGCAGGAGAGCATCCTGAA...TTTTACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS-3UTR GCA 90 bp | TTCAAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGCTGCTCCATCAACTTTaGTTGTATGTCCTTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FKHLLMLSLCVKKSPSQRLLHQL*LYVLKL Trigger: GAGTTTAAGGACATACAAGCAAAGTTGATGGAGCAG...CCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 90 bp | GGCCACGTGTGTGCTGACTCAGGAAGCCCTGCTCGTTCAGGCCTCTaGCAATCACCAGATGGGCACCCTGGCCTCCACAGTAGCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHVCADSGSPARSGL*QSPDGHPGLHSSFV Trigger: CACAAAGCTACTGTGGAGGCCAGGGTGCCCATCTGGTGATTGTCAGAGGCCTGAACGAGCAGGGCTTCCTGAGTCAGCACACACGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062037.7 ENSMUST00000160527.8 |
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| CDS TCA 90 bp | GCTTGCAGAGCTGGGCCATCTCCCCCAGGCCCTCCTGAAGTTGAGTaGGGCTCCATCTACCCACCGGTAGCCTTGAATCTTGTTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ACRAGPSPPGPPEVE*GSIYPPVALNLVEV Trigger: CACCTCAACAAGATTCAAGGCTACCGGTGGGTAGATGGAGCCTCACTCAACTTCAGGAGGGCCTGGGGGAGATGGCCCAGCTCTGCAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| CDS GCA 90 bp | TGGGCACTGCTCACAGGAGCTGTTCTGGCGCTTGACAGCTTCCAGTaGCTGGAACAGCTCACTGCGGATGTTCTCACGGTCTCTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WALLTGAVLALDSFQ*LEQLTADVLTVSAC Trigger: GCAAGCAGAGACCGTGAGAACATCCGCAGTGAGCTGTTCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCTCCTGTGAGCAGTGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CCA 90 bp | TACCAAGAGCTTGAGGAGAGACGCCAGTCTGCCTGTTCGGACCCCTaGGGCTTCCCCATGTGCTTCCTGGGAAGAAGAAGCTGGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: YQELEERRQSACSDP*GFPMCFLGRRSWDA Trigger: TGCATCCCAGCTTCTTCTTCCCAGGAAGCACATGGGGAAGCCCCAGGGGTCCGAACAGGCAGACTGGCGTCTCTCCTCAAGCTCTTGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058040.7 |
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| CDS CCA 90 bp | TGGAAGGGTAGCCATGATGGTGGGCACTGCTCACAGGAGCTGTTCTaGCGCTTGACAGCTTCCAGTGCCTGGAACAGCTCACTGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WKGSHDGGHCSQELF*RLTASSAWNSSLRM Trigger: CATCCGCAGTGAGCTGTTCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCTCCTGTGAGCAGTGCCCACCATCATGGCTACCCTTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 90 bp | GTAGCCATGATGGTGGGCACTGCTCACAGGAGCTGTTCTGGCGCTTaGCAGCTTCCAGTGCCTGGAACAGCTCACTGCGGATGTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VAMMVGTAHRSCSGA*QLPVPGTAHCGCSH Trigger: GTGAGAACATCCGCAGTGAGCTGTTCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCTCCTGTGAGCAGTGCCCACCATCATGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS-3UTR CAA 90 bp | GAAGGAGCAGGGCCCCACCAGTTCCTCTCCCAGCAACAGTTACGATGCCTACCGAATGCTACCAAGAGCTaGAGGAGAGACGCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGAGPHQFLSQQQLRCLPNATKS*RRDASL Trigger: CAGACTGGCGTCTCTCCTCAAGCTCTTGGTAGCATT...CGGTAGGCATCGTAACTGTTGCTGGGAGAGGAACTGGTGGGGCCCTGCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058040.7 |
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| CDS TCA 90 bp | GGCTCCGATATCATCCTTCAGGGAACTCAACGTCATCTTCTGCTCTaGGGCATTTGTCCTCAGCAGGTCCTGGTGGCTGAGCAGCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSDIILQGTQRHLLL*GICPQQVLVAEQHP Trigger: AGGGTGCTGCTCAGCCACCAGGACCTGCTGAGGACAAATGCCTCAGAGCAGAAGATGACGTTGAGTTCCCTGAAGGATGATATCGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 90 bp | CTGCAGGCTCCGATATCATCCTTCAGGGAACTCAACGTCATCTTCTaGTCTGAGGCATTTGTCCTCAGCAGGTCCTGGTGGCTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQAPISSFRELNVIF*SEAFVLSRSWWLSS Trigger: GCTGCTCAGCCACCAGGACCTGCTGAGGACAAATGCCTCAGAGCAGAAGATGACGTTGAGTTCCCTGAAGGATGATATCGGAGCCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS-3UTR CAA 90 bp | CAAGGGGGTTTCCTGGGATCGGTTGCTTTGTCCTATCTCAAGGCCATTTCCAGGCAGGCCCTCCTGAAGTaGAGTGAGGCTCCATCTACC | + |
|
Preference number: 5 (lower is better) Translates to: QGGFLGSVALSYLKAISRQALLK*SEAPST Trigger: GGTAGATGGAGCCTCACTCAACTTCAGGAGGGCCTG...CCTGGAAATGGCCTTGAGATAGGACAAAGCAACCGATCCCAGGAAACCCCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| CDS GCA 90 bp | CAGTGCCTGGAACAGCTCACTGCGGATGTTCTCACGGTCTCTGCTTaGTTTAGCCAAGTCCTGGGTCACACGCTCTTGCAGTTCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QCLEQLTADVLTVSA*FSQVLGHTLLQFFQ Trigger: CTGAAAGAACTGCAAGAGCGTGTGACCCAGGACTTGGCTAAAGCAAGCAGAGACCGTGAGAACATCCGCAGTGAGCTGTTCCAGGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CAA 90 bp | CCAACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCACTCCCAACGTCCCAATaGCCCTCTGGAGACCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTLCLGNRQWIRPSGFRALPTSQ*PSGDLF Trigger: GAAGAGGTCTCCAGAGGGCAATTGGGACGTTGGGAG...TGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 90 bp | TCTGGAATCATTGGGCTCTCCAGAGTTCCAGTGGCTGAAGTTGAGTaGGGCTCCATCTACCCACCGGTAGCCTTGAATCTTGTTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGIIGLSRVPVAEVE*GSIYPPVALNLVEV Trigger: CACCTCAACAAGATTCAAGGCTACCGGTGGGTAGATGGAGCCTCACTCAACTTCAGCCACTGGAACTCTGGAGAGCCCAATGATTCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS GCA 90 bp | TCTGACAATCACCAGATGGGCACCCTGGCCTCCACAGTAGCTTTGTaGTGTATCCCATGTGGCCTGTGTCTCAGAGAAATAGTAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SDNHQMGTLASTVAL*CIPCGLCLREIVAG Trigger: TCCTGCTACTATTTCTCTGAGACACAGGCCACATGGGATACAGCACAAAGCTACTGTGGAGGCCAGGGTGCCCATCTGGTGATTGTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062037.7 ENSMUST00000160527.8 |
||
| CDS TCA 90 bp | CATTGGTACATGGTGCATCATTCCACAGCCCCGAGTGCAGCATCATaGTACAGTCCTCATGTCCTCTGGAATCATTGGGCTCTCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HWYMVHHSTAPSAAS*YSPHVLWNHWALQS Trigger: ACTCTGGAGAGCCCAATGATTCCAGAGGACATGAGGACTGTATCATGATGCTGCACTCGGGGCTGTGGAATGATGCACCATGTACCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS GCA 90 bp | CCATCTCTCTCATTGGTACATGGTGCATCATTCCACAGCCCCGAGTaGAGCATCATGATACAGTCCTCATGTCCTCTGGAATCATTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSLSLVHGASFHSPE*SIMIQSSCPLESLG Trigger: GCCCAATGATTCCAGAGGACATGAGGACTGTATCATGATGCTGCACTCGGGGCTGTGGAATGATGCACCATGTACCAATGAGAGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS GCA 90 bp | ACGCTCTTGCAGTTCTTTCAGGATGCTCTCCTGCTCCATCAACTTTaGTTGTATGTCCTTAAACTCCGCCAGTGTGGTTTGCAACTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TLLQFFQDALLLHQL*LYVLKLRQCGLQLR Trigger: GCGCAGTTGCAAACCACACTGGCGGAGTTTAAGGACATACAAGCAAAGTTGATGGAGCAGGAGAGCATCCTGAAAGAACTGCAAGAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS GCA 90 bp | AAGTCCTGGGTCACACGCTCTTGCAGTTCTTTCAGGATGCTCTCCTaGTCCATCAACTTTGCTTGTATGTCCTTAAACTCCGCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KSWVTRSCSSFRMLS*SINFACMSLNSASV Trigger: CACACTGGCGGAGTTTAAGGACATACAAGCAAAGTTGATGGAGCAGGAGAGCATCCTGAAAGAACTGCAAGAGCGTGTGACCCAGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CAA 90 bp | ACACTGTGTCTAGGAAACAGGCAGTGGATCAGACCATCAGGGTTTAGAGCAGTGTGGAGACCTCTTCAATaGCACTGCCCAGCTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLCLGNRQWIRPSGFRAVWRPLQ*HCPACC Trigger: ACAACAAGCTGGGCAGTGCAATTGAAGAGGTCTCCA...CACTGCTCTAAACCCTGATGGTCTGATCCACTGCCTGTTTCCTAGACACAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CAA 90 bp | CATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTAAAAAGCAGCACCCTGAGCTaGCTGGAGGCACTGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLLMLSLCVKKSPSQRVKSSTLS*LEALDS Trigger: ACTGTCCAGTGCCTCCAGCAAGCTCAGGGTGCTGCT...TTTTACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CAA 90 bp | AAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTATCTGCTCTGAGGCATTaGTCCTCAGCAGGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KHLLMLSLCVKKSPSQRVSALRH*SSAGPG Trigger: ACCAGGACCTGCTGAGGACAAATGCCTCAGAGCAGA...TACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CAA 90 bp | CATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTAAAACTGGGTCACACGCTCTaGCAGTTCTTTCAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLLMLSLCVKKSPSQRVKLGHTL*QFFQDA Trigger: AGCATCCTGAAAGAACTGCAAGAGCGTGTGACCCAG...TTTTACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGTTTGCAACTGCGCTTTaGTCACGGAGCAGCAATTCC | + |
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Preference number: 5 (lower is better) Translates to: FKHLLMLSLCVKKSPSQRFATAL*SRSSNS Trigger: GGAATTGCTGCTCCGTGACAAAAGCGCAGTTGCAAA...CCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS-3UTR CAA 90 bp | CATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGGTAAAACAGGAAGAAAAGTCTTaGTTTGTAGCACTCCCAACG | + |
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Preference number: 5 (lower is better) Translates to: HLLMLSLCVKKSPSQRVKQEEKS*FVALPT Trigger: CGTTGGGAGTGCTACAAACAAAGACTTTTCTTCCTG...TTTTACCCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS-3UTR CAA 90 bp | TTCAAACATTTATTGATGCTCTCTCTGTGTGTGAAGAAATCTCCAAGTCAGAGGCTCCATCAACTTTGCTaGTATGTCCTTAAACTCCGC | + |
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Preference number: 5 (lower is better) Translates to: FKHLLMLSLCVKKSPSQRLHQLC*YVLKLR Trigger: GCGGAGTTTAAGGACATACAAGCAAAGTTGATGGAG...CCTCTGACTTGGAGATTTCTTCACACACAGAGAGAGCATCAATAAATGTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 72 bp | GATGGTGGGCACTGCTCACAGGAGCTGTTCTGGCGCTaGACAGCTTCCAGTGCCTGGAACAGCTCACTGCGG | + |
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Preference number: 6 (lower is better) Translates to: DGGHCSQELFWR*TASSAWNSSLR Trigger: CCGCAGTGAGCTGTTCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCTCCTGTGAGCAGTGCCCACCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 72 bp | ATGGTGGGCACTGCTCACAGGAGCTGTTCTGGCGCTTaGCAGCTTCCAGTGCCTGGAACAGCTCACTGCGGA | + |
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Preference number: 6 (lower is better) Translates to: MVGTAHRSCSGA*QLPVPGTAHCG Trigger: TCCGCAGTGAGCTGTTCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCTCCTGTGAGCAGTGCCCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 72 bp | TGTGCTGACTCAGGAAGCCCTGCTCGTTCAGGCCTCTaGCAATCACCAGATGGGCACCCTGGCCTCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: CADSGSPARSGL*QSPDGHPGLHS Trigger: ACTGTGGAGGCCAGGGTGCCCATCTGGTGATTGTCAGAGGCCTGAACGAGCAGGGCTTCCTGAGTCAGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062037.7 ENSMUST00000160527.8 |
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| CDS TCA 72 bp | GCTGGGCCATCTCCCCCAGGCCCTCCTGAAGTTGAGTaGGGCTCCATCTACCCACCGGTAGCCTTGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: AGPSPPGPPEVE*GSIYPPVALNL Trigger: AAGATTCAAGGCTACCGGTGGGTAGATGGAGCCTCACTCAACTTCAGGAGGGCCTGGGGGAGATGGCCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160527.8 |
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| CDS GCA 72 bp | CCACCGGTAGCCTTGAATCTTGTTGAGGTGGCGAACTaGCCTCAGACCCAACCAATAGCCCCGGCCACGTGT | + |
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Preference number: 6 (lower is better) Translates to: PPVALNLVEVAN*PQTQPIAPATC Trigger: ACACGTGGCCGGGGCTATTGGTTGGGTCTGAGGGCAGTTCGCCACCTCAACAAGATTCAAGGCTACCGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062037.7 ENSMUST00000160527.8 |
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| CDS CAA 90 bp | GGTAGCCATGATGGTGGGCACTGCTCACAGGAGCTGTTCTGGCGCTaGACAGCTTCCAGTGCCTGGAACAGCTCACTGCGGATGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSHDGGHCSQELFWR*TASSAWNSSLRMFS Trigger: TGAGAACATCCGCAGTGAGCTGTTCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCTCCTGTGAGCAGTGCCCACCATCATGGCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 72 bp | GCTTGCTGGAGGCACTGGACAGTAGGGTGCTCAGAATaGGAGCCCATAGAACTGTGGCCACCAGCAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ACWRHWTVGCSE*EPIELWPPAEP Trigger: TGGCTCTGCTGGTGGCCACAGTTCTATGGGCTCTCATTCTGAGCACCCTACTGTCCAGTGCCTCCAGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 72 bp | CAGGAACCTTGGAAGGGTAGCCATGATGGTGGGCACTaGTCACAGGAGCTGTTCTGGCGCTTGACAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QEPWKGSHDGGH*SQELFWRLTAS Trigger: GGAAGCTGTCAAGCGCCAGAACAGCTCCTGTGAGCAGTGCCCACCATCATGGCTACCCTTCCAAGGTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CCA 72 bp | CAGGAGCTGTTCTGGCGCTTGACAGCTTCCAGTGCCTaGAACAGCTCACTGCGGATGTTCTCACGGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QELFWRLTASSA*NSSLRMFSRSL Trigger: CAGAGACCGTGAGAACATCCGCAGTGAGCTGTTCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCTCCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CCA 72 bp | AGCCATGATGGTGGGCACTGCTCACAGGAGCTGTTCTaGCGCTTGACAGCTTCCAGTGCCTGGAACAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SHDGGHCSQELF*RLTASSAWNSS Trigger: TGAGCTGTTCCAGGCACTGGAAGCTGTCAAGCGCCAGAACAGCTCCTGTGAGCAGTGCCCACCATCATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 72 bp | AGGCTCCATCTACCCACCGGTAGCCTTGAATCTTGTTaGGGTGGCGAACTGCCCTCAGACCCAACCAATAGC | + |
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Preference number: 6 (lower is better) Translates to: RLHLPTGSLESC*GGELPSDPTNS Trigger: GCTATTGGTTGGGTCTGAGGGCAGTTCGCCACCTCAACAAGATTCAAGGCTACCGGTGGGTAGATGGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062037.7 ENSMUST00000160527.8 |
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| CDS GCA 72 bp | GAACAGCTCACTGCGGATGTTCTCACGGTCTCTGCTTaGTTTAGCCAAGTCCTGGGTCACACGCTCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: EQLTADVLTVSA*FSQVLGHTLLQ Trigger: CTGCAAGAGCGTGTGACCCAGGACTTGGCTAAAGCAAGCAGAGACCGTGAGAACATCCGCAGTGAGCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 72 bp | CACCAGATGGGCACCCTGGCCTCCACAGTAGCTTTGTaGTGTATCCCATGTGGCCTGTGTCTCAGAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: HQMGTLASTVAL*CIPCGLCLREI Trigger: TATTTCTCTGAGACACAGGCCACATGGGATACAGCACAAAGCTACTGTGGAGGCCAGGGTGCCCATCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062037.7 ENSMUST00000160527.8 |
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| CDS CAA 72 bp | AATCACCAGATGGGCACCCTGGCCTCCACAGTAGCTTaGTGCTGTATCCCATGTGGCCTGTGTCTCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: NHQMGTLASTVA*CCIPCGLCLRE Trigger: TTCTCTGAGACACAGGCCACATGGGATACAGCACAAAGCTACTGTGGAGGCCAGGGTGCCCATCTGGTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062037.7 ENSMUST00000160527.8 |
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| CDS CAA 72 bp | CTGCTCCTCTTCTCACAGATCCAGCCATCTCTCTCATaGGTACATGGTGCATCATTCCACAGCCCCGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LLLFSQIQPSLS*VHGASFHSPEC Trigger: GCACTCGGGGCTGTGGAATGATGCACCATGTACCAATGAGAGAGATGGCTGGATCTGTGAGAAGAGGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 90 bp | GCCTCTGACAATCACCAGATGGGCACCCTGGCCTCCACAGTAGCTTaGTGCTGTATCCCATGTGGCCTGTGTCTCAGAGAAATAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: ASDNHQMGTLASTVA*CCIPCGLCLREIVA Trigger: TGCTACTATTTCTCTGAGACACAGGCCACATGGGATACAGCACAAAGCTACTGTGGAGGCCAGGGTGCCCATCTGGTGATTGTCAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062037.7 ENSMUST00000160527.8 |
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| CDS CAA 90 bp | CCCGAGTGCAGCATCATGATACAGTCCTCATGTCCTCTGGAATCATaGGGCTCTCCAGAGTTCCAGTGGCTGAAGTTGAGTGAGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PECSIMIQSSCPLES*GSPEFQWLKLSEAP Trigger: TGGAGCCTCACTCAACTTCAGCCACTGGAACTCTGGAGAGCCCAATGATTCCAGAGGACATGAGGACTGTATCATGATGCTGCACTCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 72 bp | ATCATCCTTCAGGGAACTCAACGTCATCTTCTGCTCTaGGGCATTTGTCCTCAGCAGGTCCTGGTGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: IILQGTQRHLLL*GICPQQVLVAE Trigger: CTCAGCCACCAGGACCTGCTGAGGACAAATGCCTCAGAGCAGAAGATGACGTTGAGTTCCCTGAAGGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS TCA 72 bp | ATTGGGCTCTCCAGAGTTCCAGTGGCTGAAGTTGAGTaGGGCTCCATCTACCCACCGGTAGCCTTGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: IGLSRVPVAEVE*GSIYPPVALNL Trigger: AAGATTCAAGGCTACCGGTGGGTAGATGGAGCCTCACTCAACTTCAGCCACTGGAACTCTGGAGAGCCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 72 bp | CCGATATCATCCTTCAGGGAACTCAACGTCATCTTCTaGTCTGAGGCATTTGTCCTCAGCAGGTCCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PISSFRELNVIF*SEAFVLSRSWW Trigger: CCACCAGGACCTGCTGAGGACAAATGCCTCAGAGCAGAAGATGACGTTGAGTTCCCTGAAGGATGATATCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CCA 72 bp | TGCTCCTCTTCTCACAGATCCAGCCATCTCTCTCATTaGTACATGGTGCATCATTCCACAGCCCCGAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CSSSHRSSHLSH*YMVHHSTAPSA Trigger: TGCACTCGGGGCTGTGGAATGATGCACCATGTACCAATGAGAGAGATGGCTGGATCTGTGAGAAGAGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 72 bp | GGCCACCAGCAGAGCCAAGACCAGGAAGAAAAGTCTTaGTTTGTAGCACTCCCAACGTCCCAATTGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GHQQSQDQEEKS*FVALPTSQLPS Trigger: AGAGGGCAATTGGGACGTTGGGAGTGCTACAAACAAAGACTTTTCTTCCTGGTCTTGGCTCTGCTGGTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 90 bp | CTCACGGTCTCTGCTTGCTTTAGCCAAGTCCTGGGTCACACGCTCTaGCAGTTCTTTCAGGATGCTCTCCTGCTCCATCAACTTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LTVSACFSQVLGHTL*QFFQDALLLHQLCL Trigger: CAAGCAAAGTTGATGGAGCAGGAGAGCATCCTGAAAGAACTGCAAGAGCGTGTGACCCAGGACTTGGCTAAAGCAAGCAGAGACCGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CCA 72 bp | ATGTTCTCACGGTCTCTGCTTGCTTTAGCCAAGTCCTaGGTCACACGCTCTTGCAGTTCTTTCAGGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: MFSRSLLALAKS*VTRSCSSFRML Trigger: GAGCATCCTGAAAGAACTGCAAGAGCGTGTGACCCAGGACTTGGCTAAAGCAAGCAGAGACCGTGAGAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CCA 72 bp | CTTCTCACAGATCCAGCCATCTCTCTCATTGGTACATaGTGCATCATTCCACAGCCCCGAGTGCAGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LLTDPAISLIGT*CIIPQPRVQHH Trigger: ATGATGCTGCACTCGGGGCTGTGGAATGATGCACCATGTACCAATGAGAGAGATGGCTGGATCTGTGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 72 bp | CCCAACGTCCCAATTGCCCTCTGGAGACCTCTTCAATaGCACTGCCCAGCTTGTTGTATTCACCAGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PNVPIALWRPLQ*HCPACCIHQCS Trigger: TGAACACTGGTGAATACAACAAGCTGGGCAGTGCAATTGAAGAGGTCTCCAGAGGGCAATTGGGACGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 72 bp | AGTCCTGGGTCACACGCTCTTGCAGTTCTTTCAGGATaGTCTCCTGCTCCATCAACTTTGCTTGTATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SPGSHALAVLSG*SPAPSTLLVCP Trigger: AGGACATACAAGCAAAGTTGATGGAGCAGGAGAGCATCCTGAAAGAACTGCAAGAGCGTGTGACCCAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 72 bp | TCATTGGTACATGGTGCATCATTCCACAGCCCCGAGTaGAGCATCATGATACAGTCCTCATGTCCTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SLVHGASFHSPE*SIMIQSSCPLE Trigger: TTCCAGAGGACATGAGGACTGTATCATGATGCTGCACTCGGGGCTGTGGAATGATGCACCATGTACCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 72 bp | GAAAAGTCTTTGTTTGTAGCACTCCCAACGTCCCAATaGCCCTCTGGAGACCTCTTCAATTGCACTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: EKSLFVALPTSQ*PSGDLFNCTAQ Trigger: CTGGGCAGTGCAATTGAAGAGGTCTCCAGAGGGCAATTGGGACGTTGGGAGTGCTACAAACAAAGACTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 72 bp | TTTGCTTGTATGTCCTTAAACTCCGCCAGTGTGGTTTaGAACTGCGCTTTTGTCACGGAGCAGCAATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FACMSLNSASVV*NCAFVTEQQFL Trigger: CAGGAATTGCTGCTCCGTGACAAAAGCGCAGTTGCAAACCACACTGGCGGAGTTTAAGGACATACAAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 72 bp | CTTTGCTTGTATGTCCTTAAACTCCGCCAGTGTGGTTaGCAACTGCGCTTTTGTCACGGAGCAGCAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: LCLYVLKLRQCG*QLRFCHGAAIP Trigger: AGGAATTGCTGCTCCGTGACAAAAGCGCAGTTGCAAACCACACTGGCGGAGTTTAAGGACATACAAGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 72 bp | AGCATCATGATACAGTCCTCATGTCCTCTGGAATCATaGGGCTCTCCAGAGTTCCAGTGGCTGAAGTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SIMIQSSCPLES*GSPEFQWLKLS Trigger: ACTCAACTTCAGCCACTGGAACTCTGGAGAGCCCAATGATTCCAGAGGACATGAGGACTGTATCATGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS CAA 90 bp | CTCTTGCAGTTCTTTCAGGATGCTCTCCTGCTCCATCAACTTTGCTaGTATGTCCTTAAACTCCGCCAGTGTGGTTTGCAACTGCGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLQFFQDALLLHQLC*YVLKLRQCGLQLRF Trigger: AAAGCGCAGTTGCAAACCACACTGGCGGAGTTTAAGGACATACAAGCAAAGTTGATGGAGCAGGAGAGCATCCTGAAAGAACTGCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 72 bp | CAGTTCTTTCAGGATGCTCTCCTGCTCCATCAACTTTaGTTGTATGTCCTTAAACTCCGCCAGTGTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: QFFQDALLLHQL*LYVLKLRQCGL Trigger: CAAACCACACTGGCGGAGTTTAAGGACATACAAGCAAAGTTGATGGAGCAGGAGAGCATCCTGAAAGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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| CDS GCA 72 bp | GTCACACGCTCTTGCAGTTCTTTCAGGATGCTCTCCTaGTCCATCAACTTTGCTTGTATGTCCTTAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: VTRSCSSFRMLS*SINFACMSLNS Trigger: GGAGTTTAAGGACATACAAGCAAAGTTGATGGAGCAGGAGAGCATCCTGAAAGAACTGCAAGAGCGTGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062037.7 |
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