Pregenerated sensors for CLEC4B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067767Ensembl transcript IDs: ENSMUST00000088455.6
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TCTTCCACATATAGAACTTTCCAGATATCTGTGTACTaGTGGATAACAATGCAATCCCAAGGCCATAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SSTYRTFQISVY*WITMQSQGHKG Trigger: TCCTTTATGGCCTTGGGATTGCATTGTTATCCACCAGTACACAGATATCTGGAAAGTTCTATATGTGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR TCA 90 bp | ACATATAGAACTTTCCAGATATCTGTGTACTGGTGGATAACAATGCAATCCCAACCAGATGAGCACCCCTaGGAGAGCACTTCTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TYRTFQISVYWWITMQSQPDEHP*ESTSPH Trigger: GTGAGGAGAAGTGCTCTCTCAGGGGTGCTCATCTGG...TTGGGATTGCATTGTTATCCACCAGTACACAGATATCTGGAAAGTTCTATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR TCA 90 bp | GCCTACTTACATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCAGATATTGGATCACCACCAGATaGGCACCCCTGAGAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: AYLHFLWTYLPHIELSRYWITTR*APLREH Trigger: GTGCTCTCTCAGGGGTGCTCATCTGGTGGTGATCCA...ATATCTGGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CCA 90 bp | GCCTACTTACATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCAGATATCAGACTACCTGCCCTTaGGCTGGTCTTTCCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: AYLHFLWTYLPHIELSRYQTTCP*AGLSCI Trigger: GATGCAGGAAAGACCAGCCCAAGGGCAGGTAGTCTG...ATATCTGGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CCA 90 bp | ACATATAGAACTTTCCAGATATCTGTGTACTGGTGGATAACAATGCAATCCCAATGGCTTCCAATCCTTTaGGCAACAGCTCCAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: TYRTFQISVYWWITMQSQWLPIL*ATAPDL Trigger: AAGGTCTGGAGCTGTTGCCCAAAGGATTGGAAGCCA...TTGGGATTGCATTGTTATCCACCAGTACACAGATATCTGGAAAGTTCTATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CCA 90 bp | TTTGCTGCCTACTTACATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCAAATCCTGCTCTTCCTaGCTGTGGATCACCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: FAAYLHFLWTYLPHIELSKSCSS*LWITTR Trigger: TCTGGTGGTGATCCACAGCCAGGAAGAGCAGGATTT...GGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGCAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR GCA 90 bp | TGCCTACTTACATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCAGATACTGGTGATGAAATCCTaGTCTTCCTGGCTGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: CLLTFSLDISSTYRTFQILVMKS*SSWLWI Trigger: GATCCACAGCCAGGAAGAGCAGGATTTCATCACCAG...TATCTGGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR GCA 90 bp | AGAACTTTCCAGATATCTGTGTACTGGTGGATAACAATGCAATCCCAAGGCCATAGTTCTCTTCATCACTaGAGTCAATATCATTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RTFQISVYWWITMQSQGHSSLHH*SQYHSS Trigger: GCTGGAATGATATTGACTGCAGTGATGAAGAGAACT...ATGGCCTTGGGATTGCATTGTTATCCACCAGTACACAGATATCTGGAAAGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR TCA 90 bp | ATATGTATAACCATTTGCTGCCTACTTACATTTTCTCTGGACATATCTTCCACAGCTCCAGACCTTTTCTaGTACCGTAGTTCCTTCACT | + |
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Preference number: 4 (lower is better) Translates to: ICITICCLLTFSLDISSTAPDLF*YRSSFT Trigger: AGTGAAGGAACTACGGTATCAGAAAAGGTCTGGAGC...TGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGCAGCAAATGGTTATACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR TCA 90 bp | TTTGCTGCCTACTTACATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCGAGAGTCAGTTGAAGTaGAGTAGCAGTAGGAACCAA | + |
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Preference number: 4 (lower is better) Translates to: FAAYLHFLWTYLPHIELSESQLK*SSSRNQ Trigger: TTGGTTCCTACTGCTACTTCACTTCAACTGACTCTC...GGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGCAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR GCA 90 bp | CATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCAGATATCTGTGTACTTTGGGCTCACCTTTGTaGCAGAATGTGGCTCTATCA | + |
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Preference number: 4 (lower is better) Translates to: HFLWTYLPHIELSRYLCTLGSPL*QNVALS Trigger: TGATAGAGCCACATTCTGGCACAAAGGTGAGCCCAA...AGTACACAGATATCTGGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CCA 90 bp | GCCTACTTACATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCAGATATGGCTCTATCATTGTATaGTGTCTGATCAATCCATCG | + |
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Preference number: 4 (lower is better) Translates to: AYLHFLWTYLPHIELSRYGSIIV*CLINPS Trigger: CGATGGATTGATCAGACACCATACAATGATAGAGCC...ATATCTGGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CCA 90 bp | TGCCTACTTACATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCAGATACTTTGTGCCAGAATGTaGCTCTATCATTGTATGGTG | + |
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Preference number: 4 (lower is better) Translates to: CLLTFSLDISSTYRTFQILCARM*LYHCMV Trigger: CACCATACAATGATAGAGCCACATTCTGGCACAAAG...TATCTGGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS TCA 90 bp | CTGGTGATGAAATCCTGCTCTTCCTGGCTGTGGATCACCACCAGATaGGCACCCCTGAGAGAGCACTTCTCCTCACTCTTATTCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LVMKSCSSWLWITTR*APLREHFSSLLFWD Trigger: ATCCCAGAATAAGAGTGAGGAGAAGTGCTCTCTCAGGGGTGCTCATCTGGTGGTGATCCACAGCCAGGAAGAGCAGGATTTCATCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS TCA 90 bp | ACTTCTCCTCACTCTTATTCTGGGATGCCCGAGAGTCAGTTGAAGTaGAGTAGCAGTAGGAACCAAATGGCTTCCAATCCTTTGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: TSPHSYSGMPESQLK*SSSRNQMASNPLGN Trigger: GTTGCCCAAAGGATTGGAAGCCATTTGGTTCCTACTGCTACTTCACTTCAACTGACTCTCGGGCATCCCAGAATAAGAGTGAGGAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS TCA 90 bp | AGAGCACTTCTCCTCACTCTTATTCTGGGATGCCCGAGAGTCAGTTaGAGTGAAGTAGCAGTAGGAACCAAATGGCTTCCAATCCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: RALLLTLILGCPRVS*SEVAVGTKWLPILW Trigger: CCAAAGGATTGGAAGCCATTTGGTTCCTACTGCTACTTCACTTCAACTGACTCTCGGGCATCCCAGAATAAGAGTGAGGAGAAGTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CAA 90 bp | AGAACTTTCCAGATATCTGTGTACTGGTGGATAACAATGCAATCCCAAGGCCATATGGCTTCCAATCCTTaGGGCAACAGCTCCAGACCT | + |
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Preference number: 5 (lower is better) Translates to: RTFQISVYWWITMQSQGHMASNP*GNSSRP Trigger: AGGTCTGGAGCTGTTGCCCAAAGGATTGGAAGCCAT...ATGGCCTTGGGATTGCATTGTTATCCACCAGTACACAGATATCTGGAAAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CAA 90 bp | ACATATAGAACTTTCCAGATATCTGTGTACTGGTGGATAACAATGCAATCCCAAGCAGACTACCTGCCCTaGGGCTGGTCTTTCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: TYRTFQISVYWWITMQSQADYLP*GWSFLH Trigger: ATGCAGGAAAGACCAGCCCAAGGGCAGGTAGTCTGC...TTGGGATTGCATTGTTATCCACCAGTACACAGATATCTGGAAAGTTCTATATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CAA 90 bp | AGAACTTTCCAGATATCTGTGTACTGGTGGATAACAATGCAATCCCAAGGCCATTTGTTGGGCTCACCTTaGTGCCAGAATGTGGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: RTFQISVYWWITMQSQGHLLGSP*CQNVAL Trigger: TAGAGCCACATTCTGGCACAAAGGTGAGCCCAACAA...ATGGCCTTGGGATTGCATTGTTATCCACCAGTACACAGATATCTGGAAAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS CCA 90 bp | ACCGTAGTTCCTTCACTAAAGCAGATGAGATTGGAATGGTATGTGTaGAGTTCAGATAGTCTTCTATTGGGCTTGTTCATCATAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TVVPSLKQMRLEWYV*SSDSLLLGLFIISW Trigger: CCAGCTTATGATGAACAAGCCCAATAGAAGACTATCTGAACTCCACACATACCATTCCAATCTCATCTGCTTTAGTGAAGGAACTACGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS CCA 90 bp | TTTTCTGATACCGTAGTTCCTTCACTAAAGCAGATGAGATTGGAATaGTATGTGTGGAGTTCAGATAGTCTTCTATTGGGCTTGTTCATC | + |
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Preference number: 5 (lower is better) Translates to: FSDTVVPSLKQMRLE*YVWSSDSLLLGLFI Trigger: GATGAACAAGCCCAATAGAAGACTATCTGAACTCCACACATACCATTCCAATCTCATCTGCTTTAGTGAAGGAACTACGGTATCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS-3UTR CAA 90 bp | TGCCTACTTACATTTTCTCTGGACATATCTTCCACATATAGAACTTTCCAGATACTAAAGCAGATGAGATaGGAATGGTATGTGTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: CLLTFSLDISSTYRTFQILKQMR*EWYVWS Trigger: ACTCCACACATACCATTCCAATCTCATCTGCTTTAG...TATCTGGAAAGTTCTATATGTGGAAGATATGTCCAGAGAAAATGTAAGTAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS TCA 72 bp | CTCCTCACTCTTATTCTGGGATGCCCGAGAGTCAGTTaGAGTGAAGTAGCAGTAGGAACCAAATGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LLTLILGCPRVS*SEVAVGTKWLP Trigger: TGGAAGCCATTTGGTTCCTACTGCTACTTCACTTCAACTGACTCTCGGGCATCCCAGAATAAGAGTGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS TCA 72 bp | CACTCTTATTCTGGGATGCCCGAGAGTCAGTTGAAGTaGAGTAGCAGTAGGAACCAAATGGCTTCCAATCCT | + |
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Preference number: 6 (lower is better) Translates to: HSYSGMPESQLK*SSSRNQMASNP Trigger: AGGATTGGAAGCCATTTGGTTCCTACTGCTACTTCACTTCAACTGACTCTCGGGCATCCCAGAATAAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS TCA 72 bp | CTTCCAATCCTTTGGGCAACAGCTCCAGACCTTTTCTaGTACCGTAGTTCCTTCACTAAAGCAGATGAGATT | + |
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Preference number: 6 (lower is better) Translates to: LPILWATAPDLF*YRSSFTKADEI Trigger: AATCTCATCTGCTTTAGTGAAGGAACTACGGTATCAGAAAAGGTCTGGAGCTGTTGCCCAAAGGATTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS CCA 72 bp | ACCGTAGTTCCTTCACTAAAGCAGATGAGATTGGAATaGTATGTGTGGAGTTCAGATAGTCTTCTATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TVVPSLKQMRLE*YVWSSDSLLLG Trigger: GCCCAATAGAAGACTATCTGAACTCCACACATACCATTCCAATCTCATCTGCTTTAGTGAAGGAACTACGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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| CDS CCA 72 bp | CCTTCACTAAAGCAGATGAGATTGGAATGGTATGTGTaGAGTTCAGATAGTCTTCTATTGGGCTTGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: PSLKQMRLEWYV*SSDSLLLGLFI Trigger: GATGAACAAGCCCAATAGAAGACTATCTGAACTCCACACATACCATTCCAATCTCATCTGCTTTAGTGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088455.6 |
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