Pregenerated sensors for CLEC3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025784Ensembl transcript IDs: ENSMUST00000026890.6
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CCGCCCCTCTGGGCCCTGCAACAACTTGTCTCTCCCTaGGAACCACCAGGCCCGCCCCACTCACCAATGTTC | + |
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Preference number: 3 (lower is better) Translates to: PPLWALQQLVSP*EPPGPPHSPMF Trigger: GAACATTGGTGAGTGGGGCGGGCCTGGTGGTTCTCAGGGAGAGACAAGTTGTTGCAGGGCCCAGAGGGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| 3UTR-3UTR CAA 90 bp | AGAACCACCAGGCCCGCCCCACTCACCAATGTTCAGCTCAGCCCCAACGCCCCCACAGCCTTCTGCTCTTaGTGGTTCACACCCCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: RTTRPAPLTNVQLSPNAPTAFCS*WFTPLP Trigger: AGGGAGGGGTGTGAACCACAAAGAGCAGAAGGCTGT...GGGGGCGTTGGGGCTGAGCTGAACATTGGTGAGTGGGGCGGGCCTGGTGGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | AGAACCACCAGGCCCGCCCCACTCACCAATGTTCAGCTCAGCCCCAACGCCCCCTCGTTGCCCACGCTGTaGCGCGCGTACTCGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: RTTRPAPLTNVQLSPNAPSLPTL*RAYSNS Trigger: GCTGTTCGAGTACGCGCGCCACAGCGTGGGCAACGA...GGGGGCGTTGGGGCTGAGCTGAACATTGGTGAGTGGGGCGGGCCTGGTGGTTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR GCA 90 bp | GAGAGAGGAACAGAAGGTCTCCCCGCCCCTCTGGGCCCTGCAACAACTTGTCTCCCACTTGCCGTTGGCTaGGCCAGACAGGGCGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: ERGTEGLPAPLGPATTCLPLAVG*ARQGGA Trigger: TGCGCCGCCCTGTCTGGCGCAGCCAACGGCAAGTGG...GAGACAAGTTGTTGCAGGGCCCAGAGGGGCGGGGAGACCTTCTGTTCCTCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR GCA 90 bp | AAACCAAGCAGAGAGAGGAACAGAAGGTCTCCCCGCCCCTCTGGGCCCTGCAACCGCAGTTCTCGGCTTTaGCGCCGTCGGGTTGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: KPSRERNRRSPRPSGPCNRSSRL*RRRVAS Trigger: CGACGCAACCCGACGGCGGCAAAGCCGAGAACTGCG...GTTGCAGGGCCCAGAGGGGCGGGGAGACCTTCTGTTCCTCTCTCTGCTTGGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR GCA 90 bp | CTGGGCCCTGCAACAACTTGTCTCTCCCTGAGAACCACCAGGCCCGCCCCACTCACAGTCTGTAAGGCCTaGTTCTCCTTCAGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LGPATTCLSLRTTRPAPLTVCKA*FSFSRA Trigger: GGCCCTGCTGAAGGAGAAGCAGGCCTTACAGACTGT...GAGTGGGGCGGGCCTGGTGGTTCTCAGGGAGAGACAAGTTGTTGCAGGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR TCA 90 bp | AAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCCCCGCGGCCATGTCGTTaGGGCCCAGCCAGATGTTCG | + |
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Preference number: 4 (lower is better) Translates to: KLTSPTLQQPSALCGSHPPRPCR*GPARCS Trigger: CGAACATCTGGCTGGGCCTCAACGACATGGCCGCGG...GGGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR GCA 90 bp | AACAACTTGTCTCTCCCTGAGAACCACCAGGCCCGCCCCACTCACCAATGTTCACCCAGCGTGCCCCCTTaGGAGATGCAGTCCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: NNLSLPENHQARPTHQCSPSVPP*EMQSSL Trigger: GAGCGAGGACTGCATCTCGCAAGGGGGCACGCTGGG...TGAACATTGGTGAGTGGGGCGGGCCTGGTGGTTCTCAGGGAGAGACAAGTTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR GCA 90 bp | CCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCCTCCCTGGCCCAGGGCTTGTCGAACCACTTaGCGTTGGCTGCGCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: PPFNSLLLFVVHTPPWPRACRTT*RWLRQT Trigger: TGTCTGGCGCAGCCAACGGCAAGTGGTTCGACAAGC...CCTGGGCCAGGGAGGGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR GCA 90 bp | CCTGAGAACCACCAGGCCCGCCCCACTCACCAATGTTCAGCTCAGCCCCAACGCTCAAGTTCACCTTGGTaGCCTTCAGGCACACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: PENHQARPTHQCSAQPQRSSSPW*PSGTQS Trigger: AGACTGTGTGCCTGAAGGGCACCAAGGTGAACTTGA...GCGTTGGGGCTGAGCTGAACATTGGTGAGTGGGGCGGGCCTGGTGGTTCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACAGAAGGTCTCCCCGCCCCTCTGGGCCCTGCAACAACTTGTCTCTCCAGCCTTCTTGGCCTTaGGAGTGGGTGACTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: ERNRRSPRPSGPCNNLSLQPSWP*EWVTLQ Trigger: TTGCAGAGTCACCCACTCCCAAGGCCAAGAAGGCTG...GAGAGACAAGTTGTTGCAGGGCCCAGAGGGGCGGGGAGACCTTCTGTTCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR TCA 90 bp | AAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCCCGTCGGGTTGCGTCGTaGTCTCCGTCTCCCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: KLTSPTLQQPSALCGSHPRRVAS*SPSPSS Trigger: AGAACTGGGAGACGGAGATCACGACGCAACCCGACG...GGGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR GCA 90 bp | AACAACTTGTCTCTCCCTGAGAACCACCAGGCCCGCCCCACTCACCAATGTTCAAGATGTTCGCATCGTTaGCCACGCTGTGGCGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: NNLSLPENHQARPTHQCSRCSHR*PRCGAR Trigger: ACGCGCGCCACAGCGTGGGCAACGATGCGAACATCT...TGAACATTGGTGAGTGGGGCGGGCCTGGTGGTTCTCAGGGAGAGACAAGTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR TCA 90 bp | AGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCCTAGGTCTTCGGTTGGGTaGAGGCCAGGAGGCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SSQAPPFNSLLLFVVHTPRSSVG*RPGGTS Trigger: TGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCT...AGGGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | AGAGAGGAACAGAAGGTCTCCCCGCCCCTCTGGGCCCTGCAACAACTTGTCTCTCATTTGCAGCCTTCTTaGCCTTGGGAGTGGGTGACT | + |
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Preference number: 4 (lower is better) Translates to: REEQKVSPPLWALQQLVSHLQPS*PWEWVT Trigger: AGTCACCCACTCCCAAGGCCAAGAAGGCTGCAAATG...AGAGACAAGTTGTTGCAGGGCCCAGAGGGGCGGGGAGACCTTCTGTTCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | ATAGCAAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACAGCAGGGCCACCTCCTaGGCCAGGACATCCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: IASSQAPPFNSLLLFVVHSRATS*ARTSIL Trigger: CAGGATGGATGTCCTGGCCCAGGAGGTGGCCCTGCT...GTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTTGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | AAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCCTGGAAGGTCTTCGGTTaGGTGAAGGCCAGGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KLTSPTLQQPSALCGSHPWKVFG*VKARRH Trigger: GTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCA...GGGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR TCA 90 bp | CCAACTTTATTTGCAAAAACCAAGCAGAGAGAGGAACAGAAGGTCTCCCCGCCCGGCCTTGGGAGTGGGTaGCTCTGCAATGACCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PTLFAKTKQREEQKVSPPGLGSG*LCNDLG Trigger: TCCCAGGTCATTGCAGAGTCACCCACTCCCAAGGCC...GGGCGGGGAGACCTTCTGTTCCTCTCTCTGCTTGGTTTTTGCAAATAAAGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | CCATATAGCAAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTGACTCTGCAATGACCTaGGACAGGAAGGAGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PYSKLTSPTLQQPSALCGDSAMT*DRKEKR Trigger: CCTCTTCTCCTTCCTGTCCCAGGTCATTGCAGAGTC...ACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTTGCTATATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | TCAGGAATTCTGCACCAACTTTATTTGCAAAAACCAAGCAGAGAGAGGAACAGACGAACCACTTGCCGTTaGCTGCGCCAGACAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SGILHQLYLQKPSRERNRRTTCR*LRQTGR Trigger: CCGCCCTGTCTGGCGCAGCCAACGGCAAGTGGTTCG...TCTGTTCCTCTCTCTGCTTGGTTTTTGCAAATAAAGTTGGTGCAGAATTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | AAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCCTCACCAAATCTTTCTTaGCATTTGCAGCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLTSPTLQQPSALCGSHPSPNLS*HLQPSW Trigger: CCAAGAAGGCTGCAAATGCCAAGAAAGATTTGGTGA...GGGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CCA 90 bp | TCAGGAATTCTGCACCAACTTTATTTGCAAAAACCAAGCAGAGAGAGGAACAGATCCTCGCTCGCCTCATaGAAGGTCTTCGGTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGILHQLYLQKPSRERNRSSLAS*KVFGWV Trigger: CACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGA...TCTGTTCCTCTCTCTGCTTGGTTTTTGCAAATAAAGTTGGTGCAGAATTCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR TCA 90 bp | TCAGGAATTCTGCACCAACTTTATTTGCAAAAACCAAGCAGAGAGAGGAACAGATGGGTGACTCTGCAATaGCCTGGGACAGGAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SGILHQLYLQKPSRERNRWVTLQ*PGTGRR Trigger: TCTCCTTCCTGTCCCAGGTCATTGCAGAGTCACCCA...TCTGTTCCTCTCTCTGCTTGGTTTTTGCAAATAAAGTTGGTGCAGAATTCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS TCA 90 bp | GGCCGCCGGTCATGTCCACCCAGGCGCCTTCCGCGGCCATGTCGTTaGGGCCCAGCCAGATGTTCGCATCGTTGCCCACGCTGTGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: GRRSCPPRRLPRPCR*GPARCSHRCPRCGA Trigger: CGCGCCACAGCGTGGGCAACGATGCGAACATCTGGCTGGGCCTCAACGACATGGCCGCGGAAGGCGCCTGGGTGGACATGACCGGCGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 90 bp | GGGCAACTGATCGCGGCATCGCTTGTCGAACCACTTGCCGTTGGCTaGGCCAGACAGGGCGGCGCAGTTCTCGGCTTTGCCGCCGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: GQLIAASLVEPLAVG*ARQGGAVLGFAAVG Trigger: CCCGACGGCGGCAAAGCCGAGAACTGCGCCGCCCTGTCTGGCGCAGCCAACGGCAAGTGGTTCGACAAGCGATGCCGCGATCAGTTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS TCA 90 bp | ACAGGGCGGCGCAGTTCTCGGCTTTGCCGCCGTCGGGTTGCGTCGTaGTCTCCGTCTCCCAGTTCTTGTAGGCCAGGAGGCCGCCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TGRRSSRLCRRRVAS*SPSPSSCRPGGRRS Trigger: TGACCGGCGGCCTCCTGGCCTACAAGAACTGGGAGACGGAGATCACGACGCAACCCGACGGCGGCAAAGCCGAGAACTGCGCCGCCCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 90 bp | CTGTGGCGCGCGTACTCGAACAGCGCCTCGTTCTCTAGCTCTGACTaGGGGGTGCCCAGCGTGCCCCCTTGCGAGATGCAGTCCTCGCTC | + |
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Preference number: 5 (lower is better) Translates to: LWRAYSNSASFSSSD*GVPSVPPCEMQSSL Trigger: GAGCGAGGACTGCATCTCGCAAGGGGGCACGCTGGGCACCCCGCAGTCAGAGCTAGAGAACGAGGCGCTGTTCGAGTACGCGCGCCACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 90 bp | GCGCGTACTCGAACAGCGCCTCGTTCTCTAGCTCTGACTGCGGGGTaGCCAGCGTGCCCCCTTGCGAGATGCAGTCCTCGCTCGCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: ARTRTAPRSLALTAG*PACPLARCSPRSPH Trigger: ATGAGGCGAGCGAGGACTGCATCTCGCAAGGGGGCACGCTGGGCACCCCGCAGTCAGAGCTAGAGAACGAGGCGCTGTTCGAGTACGCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 90 bp | CGAACAGCGCCTCGTTCTCTAGCTCTGACTGCGGGGTGCCCAGCGTaGCCCCTTGCGAGATGCAGTCCTCGCTCGCCTCATGGAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RTAPRSLALTAGCPA*PLARCSPRSPHGRS Trigger: AGACCTTCCATGAGGCGAGCGAGGACTGCATCTCGCAAGGGGGCACGCTGGGCACCCCGCAGTCAGAGCTAGAGAACGAGGCGCTGTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 90 bp | TGTAGGGCAACTGATCGCGGCATCGCTTGTCGAACCACTTGCCGTTaGCTGCGCCAGACAGGGCGGCGCAGTTCTCGGCTTTGCCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: CRATDRGIACRTTCR*LRQTGRRSSRLCRR Trigger: ACGGCGGCAAAGCCGAGAACTGCGCCGCCCTGTCTGGCGCAGCCAACGGCAAGTGGTTCGACAAGCGATGCCGCGATCAGTTGCCCTACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 90 bp | GGCAGATGTAGGGCAACTGATCGCGGCATCGCTTGTCGAACCACTTaGCGTTGGCTGCGCCAGACAGGGCGGCGCAGTTCTCGGCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: GRCRATDRGIACRTT*RWLRQTGRRSSRLC Trigger: GCAAAGCCGAGAACTGCGCCGCCCTGTCTGGCGCAGCCAACGGCAAGTGGTTCGACAAGCGATGCCGCGATCAGTTGCCCTACATCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 90 bp | GTGCCCAGCGTGCCCCCTTGCGAGATGCAGTCCTCGCTCGCCTCATaGAAGGTCTTCGGTTGGGTGAAGGCCAGGAGGCACTTCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: VPSVPPCEMQSSLAS*KVFGWVKARRHFKF Trigger: GAACTTGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGACTGCATCTCGCAAGGGGGCACGCTGGGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | GAGAGGAACAGAAGGTCTCCCCGCCCCTCTGGGCCCTGCAACAACTTGTCTCTCCGCTTGTCGAACCACTaGCCGTTGGCTGCGCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: ERNRRSPRPSGPCNNLSLRLSNH*PLAAPD Trigger: GTCTGGCGCAGCCAACGGCAAGTGGTTCGACAAGCG...GAGAGACAAGTTGTTGCAGGGCCCAGAGGGGCGGGGAGACCTTCTGTTCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 90 bp | ATGTCGTTGAGGCCCAGCCAGATGTTCGCATCGTTGCCCACGCTGTaGCGCGCGTACTCGAACAGCGCCTCGTTCTCTAGCTCTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: MSLRPSQMFASLPTL*RAYSNSASFSSSDC Trigger: GCAGTCAGAGCTAGAGAACGAGGCGCTGTTCGAGTACGCGCGCCACAGCGTGGGCAACGATGCGAACATCTGGCTGGGCCTCAACGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | GAGAGGAACAGAAGGTCTCCCCGCCCCTCTGGGCCCTGCAACAACTTGTCTCTCGCAGCCTTCTTGGCCTaGGGAGTGGGTGACTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ERNRRSPRPSGPCNNLSLAAFLA*GVGDSA Trigger: TGCAGAGTCACCCACTCCCAAGGCCAAGAAGGCTGC...GAGAGACAAGTTGTTGCAGGGCCCAGAGGGGCGGGGAGACCTTCTGTTCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS TCA 90 bp | GCGAGATGCAGTCCTCGCTCGCCTCATGGAAGGTCTTCGGTTGGGTaGAGGCCAGGAGGCACTTCAAGTTCACCTTGGTGCCCTTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: ARCSPRSPHGRSSVG*RPGGTSSSPWCPSG Trigger: GCCTGAAGGGCACCAAGGTGAACTTGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGACTGCATCTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | GCAACAACTTGTCTCTCCCTGAGAACCACCAGGCCCGCCCCACTCACCAATGTTTCCGCGGCCATGTCGTaGAGGCCCAGCCAGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: ATTCLSLRTTRPAPLTNVSAAMS*RPSQMF Trigger: GAACATCTGGCTGGGCCTCAACGACATGGCCGCGGA...AACATTGGTGAGTGGGGCGGGCCTGGTGGTTCTCAGGGAGAGACAAGTTGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | AAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCCTCGAACCACTTGCCGTaGGCTGCGCCAGACAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: KLTSPTLQQPSALCGSHPSNHLP*AAPDRA Trigger: CGCCCTGTCTGGCGCAGCCAACGGCAAGTGGTTCGA...GGGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 90 bp | CCTTGCGAGATGCAGTCCTCGCTCGCCTCATGGAAGGTCTTCGGTTaGGTGAAGGCCAGGAGGCACTTCAAGTTCACCTTGGTGCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PCEMQSSLASWKVFG*VKARRHFKFTLVPF Trigger: GAAGGGCACCAAGGTGAACTTGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGACTGCATCTCGCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGGAACAGAAGGTCTCCCCGCCCCTCTGGGCCCTGCAACAACTTGTCTATGGAAGGTCTTCGGTaGGGTGAAGGCCAGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RERNRRSPRPSGPCNNLSMEGLR*GEGQEA Trigger: TGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCAT...AGACAAGTTGTTGCAGGGCCCAGAGGGGCGGGGAGACCTTCTGTTCCTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | CCATATAGCAAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTGCGCAGTTCTCGGCTTaGCCGCCGTCGGGTTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: PYSKLTSPTLQQPSALCGAQFSA*PPSGCV Trigger: GACGCAACCCGACGGCGGCAAAGCCGAGAACTGCGC...ACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTTGCTATATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | CAACTTTATTTGCAAAAACCAAGCAGAGAGAGGAACAGAAGGTCTCCCCGCCCCGCCCAGCGTGCCCCCTaGCGAGATGCAGTCCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: QLYLQKPSRERNRRSPRPAQRAP*RDAVLA Trigger: AGCGAGGACTGCATCTCGCAAGGGGGCACGCTGGGC...GGGGCGGGGAGACCTTCTGTTCCTCTCTCTGCTTGGTTTTTGCAAATAAAGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | AAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCCGCATTTGCAGCCTTCTaGGCCTTGGGAGTGGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: KLTSPTLQQPSALCGSHPAFAAF*ALGVGD Trigger: GTCACCCACTCCCAAGGCCAAGAAGGCTGCAAATGC...GGGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | GCAACAACTTGTCTCTCCCTGAGAACCACCAGGCCCGCCCCACTCACCAATGTTCACTTCAAGTTCACCTaGGTGCCCTTCAGGCACACA | + |
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Preference number: 5 (lower is better) Translates to: ATTCLSLRTTRPAPLTNVHFKFT*VPFRHT Trigger: TGTGTGCCTGAAGGGCACCAAGGTGAACTTGAAGTG...AACATTGGTGAGTGGGGCGGGCCTGGTGGTTCTCAGGGAGAGACAAGTTGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | CAAGCTCACAAGCCCCACCCTTCAACAGCCTTCTGCTCTTTGTGGTTCACACCCAATCTTTCTTGGCATTaGCAGCCTTCTTGGCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QAHKPHPSTAFCSLWFTPNLSWH*QPSWPW Trigger: CCAAGGCCAAGAAGGCTGCAAATGCCAAGAAAGATT...GGGTGTGAACCACAAAGAGCAGAAGGCTGTTGAAGGGTGGGGCTTGTGAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS-3UTR CAA 90 bp | GCAACAACTTGTCTCTCCCTGAGAACCACCAGGCCCGCCCCACTCACCAATGTTCTCACCAAATCTTTCTaGGCATTTGCAGCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: ATTCLSLRTTRPAPLTNVLTKSF*AFAAFL Trigger: CAAGAAGGCTGCAAATGCCAAGAAAGATTTGGTGAG...AACATTGGTGAGTGGGGCGGGCCTGGTGGTTCTCAGGGAGAGACAAGTTGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 90 bp | AGGCCGCCGGTCATGTCCACCCAGGCGCCTTCCGCGGCCATGTCGTaGAGGCCCAGCCAGATGTTCGCATCGTTGCCCACGCTGTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RPPVMSTQAPSAAMS*RPSQMFASLPTLWR Trigger: GCGCCACAGCGTGGGCAACGATGCGAACATCTGGCTGGGCCTCAACGACATGGCCGCGGAAGGCGCCTGGGTGGACATGACCGGCGGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 72 bp | TTGGCTGCGCCAGACAGGGCGGCGCAGTTCTCGGCTTaGCCGCCGTCGGGTTGCGTCGTGATCTCCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LAAPDRAAQFSA*PPSGCVVISVS Trigger: GGAGACGGAGATCACGACGCAACCCGACGGCGGCAAAGCCGAGAACTGCGCCGCCCTGTCTGGCGCAGCCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 90 bp | TGCGCCAGACAGGGCGGCGCAGTTCTCGGCTTTGCCGCCGTCGGGTaGCGTCGTGATCTCCGTCTCCCAGTTCTTGTAGGCCAGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: CARQGGAVLGFAAVG*RRDLRLPVLVGQEA Trigger: GGCCTCCTGGCCTACAAGAACTGGGAGACGGAGATCACGACGCAACCCGACGGCGGCAAAGCCGAGAACTGCGCCGCCCTGTCTGGCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 72 bp | CGAACAGCGCCTCGTTCTCTAGCTCTGACTGCGGGGTaGCCAGCGTGCCCCCTTGCGAGATGCAGTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RTAPRSLALTAG*PACPLARCSPR Trigger: GCGAGGACTGCATCTCGCAAGGGGGCACGCTGGGCACCCCGCAGTCAGAGCTAGAGAACGAGGCGCTGTTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 90 bp | CACTTGCCGTTGGCTGCGCCAGACAGGGCGGCGCAGTTCTCGGCTTaGCCGCCGTCGGGTTGCGTCGTGATCTCCGTCTCCCAGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: HLPLAAPDRAAQFSA*PPSGCVVISVSQFL Trigger: CAAGAACTGGGAGACGGAGATCACGACGCAACCCGACGGCGGCAAAGCCGAGAACTGCGCCGCCCTGTCTGGCGCAGCCAACGGCAAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS TCA 72 bp | TCATGTCCACCCAGGCGCCTTCCGCGGCCATGTCGTTaGGGCCCAGCCAGATGTTCGCATCGTTGCCCACGC | + |
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Preference number: 6 (lower is better) Translates to: SCPPRRLPRPCR*GPARCSHRCPR Trigger: GCGTGGGCAACGATGCGAACATCTGGCTGGGCCTCAACGACATGGCCGCGGAAGGCGCCTGGGTGGACATGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 72 bp | CTGACTGCGGGGTGCCCAGCGTGCCCCCTTGCGAGATaGAGTCCTCGCTCGCCTCATGGAAGGTCTTCGGTT | + |
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Preference number: 6 (lower is better) Translates to: LTAGCPACPLAR*SPRSPHGRSSV Trigger: AACCGAAGACCTTCCATGAGGCGAGCGAGGACTGCATCTCGCAAGGGGGCACGCTGGGCACCCCGCAGTCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 72 bp | CCTCGTTCTCTAGCTCTGACTGCGGGGTGCCCAGCGTaGCCCCTTGCGAGATGCAGTCCTCGCTCGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PRSLALTAGCPA*PLARCSPRSPH Trigger: ATGAGGCGAGCGAGGACTGCATCTCGCAAGGGGGCACGCTGGGCACCCCGCAGTCAGAGCTAGAGAACGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 72 bp | ATCGCGGCATCGCTTGTCGAACCACTTGCCGTTGGCTaGGCCAGACAGGGCGGCGCAGTTCTCGGCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: IAASLVEPLAVG*ARQGGAVLGFA Trigger: GGCAAAGCCGAGAACTGCGCCGCCCTGTCTGGCGCAGCCAACGGCAAGTGGTTCGACAAGCGATGCCGCGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 72 bp | GCCATGTCGTTGAGGCCCAGCCAGATGTTCGCATCGTaGCCCACGCTGTGGCGCGCGTACTCGAACAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: AMSLRPSQMFAS*PTLWRAYSNSA Trigger: GGCGCTGTTCGAGTACGCGCGCCACAGCGTGGGCAACGATGCGAACATCTGGCTGGGCCTCAACGACATGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 72 bp | GTCATGTCCACCCAGGCGCCTTCCGCGGCCATGTCGTaGAGGCCCAGCCAGATGTTCGCATCGTTGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: VMSTQAPSAAMS*RPSQMFASLPT Trigger: CGTGGGCAACGATGCGAACATCTGGCTGGGCCTCAACGACATGGCCGCGGAAGGCGCCTGGGTGGACATGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 72 bp | CAGGGCGGCGCAGTTCTCGGCTTTGCCGCCGTCGGGTaGCGTCGTGATCTCCGTCTCCCAGTTCTTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: QGGAVLGFAAVG*RRDLRLPVLVG Trigger: GCCTACAAGAACTGGGAGACGGAGATCACGACGCAACCCGACGGCGGCAAAGCCGAGAACTGCGCCGCCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 90 bp | CCTTCCGCGGCCATGTCGTTGAGGCCCAGCCAGATGTTCGCATCGTaGCCCACGCTGTGGCGCGCGTACTCGAACAGCGCCTCGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSAAMSLRPSQMFAS*PTLWRAYSNSASFS Trigger: AGAGAACGAGGCGCTGTTCGAGTACGCGCGCCACAGCGTGGGCAACGATGCGAACATCTGGCTGGGCCTCAACGACATGGCCGCGGAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS TCA 72 bp | CGCAGTTCTCGGCTTTGCCGCCGTCGGGTTGCGTCGTaGTCTCCGTCTCCCAGTTCTTGTAGGCCAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RSSRLCRRRVAS*SPSPSSCRPGG Trigger: GCCTCCTGGCCTACAAGAACTGGGAGACGGAGATCACGACGCAACCCGACGGCGGCAAAGCCGAGAACTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 72 bp | AGGGCAACTGATCGCGGCATCGCTTGTCGAACCACTTaGCGTTGGCTGCGCCAGACAGGGCGGCGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RATDRGIACRTT*RWLRQTGRRSS Trigger: AGAACTGCGCCGCCCTGTCTGGCGCAGCCAACGGCAAGTGGTTCGACAAGCGATGCCGCGATCAGTTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 72 bp | GTGCCCCCTTGCGAGATGCAGTCCTCGCTCGCCTCATaGAAGGTCTTCGGTTGGGTGAAGGCCAGGAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VPPCEMQSSLAS*KVFGWVKARRH Trigger: GTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGACTGCATCTCGCAAGGGGGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 72 bp | AGGCCCAGCCAGATGTTCGCATCGTTGCCCACGCTGTaGCGCGCGTACTCGAACAGCGCCTCGTTCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: RPSQMFASLPTL*RAYSNSASFSS Trigger: GCTAGAGAACGAGGCGCTGTTCGAGTACGCGCGCCACAGCGTGGGCAACGATGCGAACATCTGGCTGGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 72 bp | ACTGATCGCGGCATCGCTTGTCGAACCACTTGCCGTTaGCTGCGCCAGACAGGGCGGCGCAGTTCTCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TDRGIACRTTCR*LRQTGRRSSRL Trigger: AAGCCGAGAACTGCGCCGCCCTGTCTGGCGCAGCCAACGGCAAGTGGTTCGACAAGCGATGCCGCGATCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS GCA 72 bp | ACCTTGGTGCCCTTCAGGCACACAGTCTGTAAGGCCTaGTTCTCCTTCAGCAGGGCCACCTCCTGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TLVPFRHTVCKA*FSFSRATSWAR Trigger: CCTGGCCCAGGAGGTGGCCCTGCTGAAGGAGAAGCAGGCCTTACAGACTGTGTGCCTGAAGGGCACCAAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 90 bp | CCCTTGCGAGATGCAGTCCTCGCTCGCCTCATGGAAGGTCTTCGGTaGGGTGAAGGCCAGGAGGCACTTCAAGTTCACCTTGGTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: PLRDAVLARLMEGLR*GEGQEALQVHLGAL Trigger: AAGGGCACCAAGGTGAACTTGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGACTGCATCTCGCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS TCA 72 bp | AGTCCTCGCTCGCCTCATGGAAGGTCTTCGGTTGGGTaGAGGCCAGGAGGCACTTCAAGTTCACCTTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SPRSPHGRSSVG*RPGGTSSSPWC Trigger: GCACCAAGGTGAACTTGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 72 bp | GGTTGGGTGAAGGCCAGGAGGCACTTCAAGTTCACCTaGGTGCCCTTCAGGCACACAGTCTGTAAGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: GWVKARRHFKFT*VPFRHTVCKAC Trigger: GCAGGCCTTACAGACTGTGTGCCTGAAGGGCACCAAGGTGAACTTGAAGTGCCTCCTGGCCTTCACCCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 72 bp | ATGCAGTCCTCGCTCGCCTCATGGAAGGTCTTCGGTTaGGTGAAGGCCAGGAGGCACTTCAAGTTCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: MQSSLASWKVFG*VKARRHFKFTL Trigger: CAAGGTGAACTTGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGACTGCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 72 bp | GATGCAGTCCTCGCTCGCCTCATGGAAGGTCTTCGGTaGGGTGAAGGCCAGGAGGCACTTCAAGTTCACCTT | + |
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Preference number: 6 (lower is better) Translates to: DAVLARLMEGLR*GEGQEALQVHL Trigger: AAGGTGAACTTGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCTTCCATGAGGCGAGCGAGGACTGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 90 bp | AAGGTCTTCGGTTGGGTGAAGGCCAGGAGGCACTTCAAGTTCACCTaGGTGCCCTTCAGGCACACAGTCTGTAAGGCCTGCTTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KVFGWVKARRHFKFT*VPFRHTVCKACFSF Trigger: GAAGGAGAAGCAGGCCTTACAGACTGTGTGCCTGAAGGGCACCAAGGTGAACTTGAAGTGCCTCCTGGCCTTCACCCAACCGAAGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS TCA 72 bp | GGGCCACCTCCTGGGCCAGGACATCCATCCTGTTCTTaGGTTCCTCGAACATCTTTGAGCTCACCAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: GPPPGPGHPSCS*VPRTSLSSPNL Trigger: AAGATTTGGTGAGCTCAAAGATGTTCGAGGAACTCAAGAACAGGATGGATGTCCTGGCCCAGGAGGTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 72 bp | AGGGCCACCTCCTGGGCCAGGACATCCATCCTGTTCTaGAGTTCCTCGAACATCTTTGAGCTCACCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: RATSWARTSILF*SSSNIFELTKS Trigger: AGATTTGGTGAGCTCAAAGATGTTCGAGGAACTCAAGAACAGGATGGATGTCCTGGCCCAGGAGGTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CCA 72 bp | GTTCCTCGAACATCTTTGAGCTCACCAAATCTTTCTTaGCATTTGCAGCCTTCTTGGCCTTGGGAGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VPRTSLSSPNLS*HLQPSWPWEWV Trigger: CACCCACTCCCAAGGCCAAGAAGGCTGCAAATGCCAAGAAAGATTTGGTGAGCTCAAAGATGTTCGAGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 90 bp | CTGTTCTTGAGTTCCTCGAACATCTTTGAGCTCACCAAATCTTTCTaGGCATTTGCAGCCTTCTTGGCCTTGGGAGTGGGTGACTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LFLSSSNIFELTKSF*AFAAFLALGVGDSA Trigger: TGCAGAGTCACCCACTCCCAAGGCCAAGAAGGCTGCAAATGCCAAGAAAGATTTGGTGAGCTCAAAGATGTTCGAGGAACTCAAGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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| CDS CAA 72 bp | AGTTCCTCGAACATCTTTGAGCTCACCAAATCTTTCTaGGCATTTGCAGCCTTCTTGGCCTTGGGAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SSSNIFELTKSF*AFAAFLALGVG Trigger: ACCCACTCCCAAGGCCAAGAAGGCTGCAAATGCCAAGAAAGATTTGGTGAGCTCAAAGATGTTCGAGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026890.6 |
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