Pregenerated sensors for CLEC3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008874Ensembl transcript IDs: ENSMUST00000009018.4
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GACTGGGAGAACAGGACACAGTTTTCCCGCTTGCCACCACTTGGCTaGGCACGGTCCCAGTTGAGGAAGGAGACAGCGAATCCGTGGACA | + |
Preference number: 5 (lower is better) Translates to: DWENRTQFSRLPPLG*ARSQLRKETANPWT Trigger: TGTCCACGGATTCGCTGTCTCCTTCCTCAACTGGGACCGTGCCCAGCCAAGTGGTGGCAAGCGGGAAAACTGTGTCCTGTTCTCCCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 90 bp | CACAGTTTTCCCGCTTGCCACCACTTGGCTGGGCACGGTCCCAGTTaGGGAAGGAGACAGCGAATCCGTGGACATCGAGGAACTTGCCTT | + |
Preference number: 5 (lower is better) Translates to: HSFPACHHLAGHGPS*GRRQRIRGHRGTCL Trigger: AAGGCAAGTTCCTCGATGTCCACGGATTCGCTGTCTCCTTCCTCAACTGGGACCGTGCCCAGCCAAGTGGTGGCAAGCGGGAAAACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 90 bp | TCGCTTGCTACTGCGACAGGCTTCGTCGCTCCATTTCCCCTGAGCTaGCTGGGAGAACAGGACACAGTTTTCCCGCTTGCCACCACTTGG | + |
Preference number: 5 (lower is better) Translates to: SLATATGFVAPFPLS*LGEQDTVFPLATTW Trigger: CCAAGTGGTGGCAAGCGGGAAAACTGTGTCCTGTTCTCCCAGTCAGCTCAGGGGAAATGGAGCGACGAAGCCTGTCGCAGTAGCAAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 90 bp | ATGTATCGCTTGCTACTGCGACAGGCTTCGTCGCTCCATTTCCCCTaGGCTGACTGGGAGAACAGGACACAGTTTTCCCGCTTGCCACCA | + |
Preference number: 5 (lower is better) Translates to: MYRLLLRQASSLHFP*ADWENRTQFSRLPP Trigger: TGGTGGCAAGCGGGAAAACTGTGTCCTGTTCTCCCAGTCAGCTCAGGGGAAATGGAGCGACGAAGCCTGTCGCAGTAGCAAGCGATACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CCA 90 bp | TCAGGTCGTCATCCTTTGCTTTCACGCGGCGTTTGCTGTGTTTCCTaGCTTTCATTCGAGATGGGTAGCCGTCGGTCTGGTCCAGGAGTA | + |
Preference number: 5 (lower is better) Translates to: SGRHPLLSRGVCCVS*LSFEMGSRRSGPGV Trigger: TACTCCTGGACCAGACCGACGGCTACCCATCTCGAATGAAAGCCAGGAAACACAGCAAACGCCGCGTGAAAGCAAAGGATGACGACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 90 bp | TGCATCTCCTTCAAGGCGTTGACTTCCCGCCACAGCTTTTCAACTTaGGATTTCAGGTCGTCATCCTTTGCTTTCACGCGGCGTTTGCTG | + |
Preference number: 5 (lower is better) Translates to: CISFKALTSRHSFST*DFRSSSFAFTRRLL Trigger: CAGCAAACGCCGCGTGAAAGCAAAGGATGACGACCTGAAATCTCAAGTTGAAAAGCTGTGGCGGGAAGTCAACGCCTTGAAGGAGATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 90 bp | CTCGGAGACAGACTGTCTGCAGAGCTTGCATCTCCTTCAAGGCGTTaGCTTCCCGCCACAGCTTTTCAACTTGAGATTTCAGGTCGTCAT | + |
Preference number: 5 (lower is better) Translates to: LGDRLSAELASPSRR*LPATAFQLEISGRH Trigger: ATGACGACCTGAAATCTCAAGTTGAAAAGCTGTGGCGGGAAGTCAACGCCTTGAAGGAGATGCAAGCTCTGCAGACAGTCTGTCTCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS GCA 90 bp | CAACTTGAGATTTCAGGTCGTCATCCTTTGCTTTCACGCGGCGTTTaGTGTGTTTCCTGGCTTTCATTCGAGATGGGTAGCCGTCGGTCT | + |
Preference number: 5 (lower is better) Translates to: QLEISGRHPLLSRGV*CVSWLSFEMGSRRS Trigger: AGACCGACGGCTACCCATCTCGAATGAAAGCCAGGAAACACAGCAAACGCCGCGTGAAAGCAAAGGATGACGACCTGAAATCTCAAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 90 bp | GGAAATGCAGTCTTCGTTGGCTTCGTGGTAATGCTTGAGGCCTTCTaGAGCAAGGTAGCACTTCTTATGAACTTTGGTGCCTCGGAGACA | + |
Preference number: 5 (lower is better) Translates to: GNAVFVGFVVMLEAF*SKVALLMNFGASET Trigger: TGTCTCCGAGGCACCAAAGTTCATAAGAAGTGCTACCTTGCTTCAGAAGGCCTCAAGCATTACCACGAAGCCAACGAAGACTGCATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS GCA 90 bp | TTCCCGCCACAGCTTTTCAACTTGAGATTTCAGGTCGTCATCCTTTaGTTTCACGCGGCGTTTGCTGTGTTTCCTGGCTTTCATTCGAGA | + |
Preference number: 5 (lower is better) Translates to: FPPQLFNLRFQVVIL*FHAAFAVFPGFHSR Trigger: TCTCGAATGAAAGCCAGGAAACACAGCAAACGCCGCGTGAAAGCAAAGGATGACGACCTGAAATCTCAAGTTGAAAAGCTGTGGCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 72 bp | CCCGCTTGCCACCACTTGGCTGGGCACGGTCCCAGTTaGGGAAGGAGACAGCGAATCCGTGGACATCGAGGA | + |
Preference number: 6 (lower is better) Translates to: PACHHLAGHGPS*GRRQRIRGHRG Trigger: TCCTCGATGTCCACGGATTCGCTGTCTCCTTCCTCAACTGGGACCGTGCCCAGCCAAGTGGTGGCAAGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CAA 72 bp | TCCCGCTTGCCACCACTTGGCTGGGCACGGTCCCAGTaGAGGAAGGAGACAGCGAATCCGTGGACATCGAGG | + |
Preference number: 6 (lower is better) Translates to: SRLPPLGWARSQ*RKETANPWTSR Trigger: CCTCGATGTCCACGGATTCGCTGTCTCCTTCCTCAACTGGGACCGTGCCCAGCCAAGTGGTGGCAAGCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CCA 72 bp | GGAGAACAGGACACAGTTTTCCCGCTTGCCACCACTTaGCTGGGCACGGTCCCAGTTGAGGAAGGAGACAGC | + |
Preference number: 6 (lower is better) Translates to: GEQDTVFPLATT*LGTVPVEEGDS Trigger: GCTGTCTCCTTCCTCAACTGGGACCGTGCCCAGCCAAGTGGTGGCAAGCGGGAAAACTGTGTCCTGTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CAA 90 bp | ACACAGTTTTCCCGCTTGCCACCACTTGGCTGGGCACGGTCCCAGTaGAGGAAGGAGACAGCGAATCCGTGGACATCGAGGAACTTGCCT | + |
Preference number: 6 (lower is better) Translates to: TQFSRLPPLGWARSQ*RKETANPWTSRNLP Trigger: AGGCAAGTTCCTCGATGTCCACGGATTCGCTGTCTCCTTCCTCAACTGGGACCGTGCCCAGCCAAGTGGTGGCAAGCGGGAAAACTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 72 bp | ACTGCGACAGGCTTCGTCGCTCCATTTCCCCTGAGCTaGCTGGGAGAACAGGACACAGTTTTCCCGCTTGCC | + |
Preference number: 6 (lower is better) Translates to: TATGFVAPFPLS*LGEQDTVFPLA Trigger: GGCAAGCGGGAAAACTGTGTCCTGTTCTCCCAGTCAGCTCAGGGGAAATGGAGCGACGAAGCCTGTCGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 72 bp | TTGCTACTGCGACAGGCTTCGTCGCTCCATTTCCCCTaGGCTGACTGGGAGAACAGGACACAGTTTTCCCGC | + |
Preference number: 6 (lower is better) Translates to: LLLRQASSLHFP*ADWENRTQFSR Trigger: GCGGGAAAACTGTGTCCTGTTCTCCCAGTCAGCTCAGGGGAAATGGAGCGACGAAGCCTGTCGCAGTAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CCA 72 bp | AACAGGACACAGTTTTCCCGCTTGCCACCACTTGGCTaGGCACGGTCCCAGTTGAGGAAGGAGACAGCGAAT | + |
Preference number: 6 (lower is better) Translates to: NRTQFSRLPPLG*ARSQLRKETAN Trigger: ATTCGCTGTCTCCTTCCTCAACTGGGACCGTGCCCAGCCAAGTGGTGGCAAGCGGGAAAACTGTGTCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CCA 72 bp | CGTCGGAATTCCTGGGGACAACCAGGGTCCCTCCCTTaGAAATGCAGTCTTCGTTGGCTTCGTGGTAATGCT | + |
Preference number: 6 (lower is better) Translates to: RRNSWGQPGSLP*KCSLRWLRGNA Trigger: AGCATTACCACGAAGCCAACGAAGACTGCATTTCCAAGGGAGGGACCCTGGTTGTCCCCAGGAATTCCGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 72 bp | GAGATGGGTAGCCGTCGGTCTGGTCCAGGAGTAAGCTaGCCACCAGGATACAAAGGACAAGTCCGTTCTTTG | + |
Preference number: 6 (lower is better) Translates to: EMGSRRSGPGVS*PPGYKGQVRSL Trigger: CAAAGAACGGACTTGTCCTTTGTATCCTGGTGGTCAGCTTACTCCTGGACCAGACCGACGGCTACCCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 72 bp | CTGGCAGACTCCTCTTACCATAGTCTCGAAGGGCATTaGTTTCGTCGGAATTCCTGGGGACAACCAGGGTCC | + |
Preference number: 6 (lower is better) Translates to: LADSSYHSLEGH*FRRNSWGQPGS Trigger: GGACCCTGGTTGTCCCCAGGAATTCCGACGAAATCAATGCCCTTCGAGACTATGGTAAGAGGAGTCTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CCA 72 bp | CATCCTTTGCTTTCACGCGGCGTTTGCTGTGTTTCCTaGCTTTCATTCGAGATGGGTAGCCGTCGGTCTGGT | + |
Preference number: 6 (lower is better) Translates to: HPLLSRGVCCVS*LSFEMGSRRSG Trigger: ACCAGACCGACGGCTACCCATCTCGAATGAAAGCCAGGAAACACAGCAAACGCCGCGTGAAAGCAAAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CAA 90 bp | CTTCCCGCCACAGCTTTTCAACTTGAGATTTCAGGTCGTCATCCTTaGCTTTCACGCGGCGTTTGCTGTGTTTCCTGGCTTTCATTCGAG | + |
Preference number: 6 (lower is better) Translates to: LPATAFQLEISGRHP*LSRGVCCVSWLSFE Trigger: CTCGAATGAAAGCCAGGAAACACAGCAAACGCCGCGTGAAAGCAAAGGATGACGACCTGAAATCTCAAGTTGAAAAGCTGTGGCGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CAA 90 bp | TTGCATCTCCTTCAAGGCGTTGACTTCCCGCCACAGCTTTTCAACTaGAGATTTCAGGTCGTCATCCTTTGCTTTCACGCGGCGTTTGCT | + |
Preference number: 6 (lower is better) Translates to: LHLLQGVDFPPQLFN*RFQVVILCFHAAFA Trigger: AGCAAACGCCGCGTGAAAGCAAAGGATGACGACCTGAAATCTCAAGTTGAAAAGCTGTGGCGGGAAGTCAACGCCTTGAAGGAGATGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 72 bp | TTCAAGGCGTTGACTTCCCGCCACAGCTTTTCAACTTaGGATTTCAGGTCGTCATCCTTTGCTTTCACGCGG | + |
Preference number: 6 (lower is better) Translates to: FKALTSRHSFST*DFRSSSFAFTR Trigger: CCGCGTGAAAGCAAAGGATGACGACCTGAAATCTCAAGTTGAAAAGCTGTGGCGGGAAGTCAACGCCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS GCA 72 bp | ATTTCAGGTCGTCATCCTTTGCTTTCACGCGGCGTTTaGTGTGTTTCCTGGCTTTCATTCGAGATGGGTAGC | + |
Preference number: 6 (lower is better) Translates to: ISGRHPLLSRGV*CVSWLSFEMGS Trigger: GCTACCCATCTCGAATGAAAGCCAGGAAACACAGCAAACGCCGCGTGAAAGCAAAGGATGACGACCTGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CAA 72 bp | AGGAAGGAGACAGCGAATCCGTGGACATCGAGGAACTaGCCTTCTGTGACCATGTCATTTATGCCTAGCCAA | + |
Preference number: 6 (lower is better) Translates to: RKETANPWTSRN*PSVTMSFMPSQ Trigger: TTGGCTAGGCATAAATGACATGGTCACAGAAGGCAAGTTCCTCGATGTCCACGGATTCGCTGTCTCCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS CAA 90 bp | TCCCAGTTGAGGAAGGAGACAGCGAATCCGTGGACATCGAGGAACTaGCCTTCTGTGACCATGTCATTTATGCCTAGCCAAAAGTCATTG | + |
Preference number: 6 (lower is better) Translates to: SQLRKETANPWTSRN*PSVTMSFMPSQKSL Trigger: CAATGACTTTTGGCTAGGCATAAATGACATGGTCACAGAAGGCAAGTTCCTCGATGTCCACGGATTCGCTGTCTCCTTCCTCAACTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS TCA 72 bp | AGACTGTCTGCAGAGCTTGCATCTCCTTCAAGGCGTTaGCTTCCCGCCACAGCTTTTCAACTTGAGATTTCA | + |
Preference number: 6 (lower is better) Translates to: RLSAELASPSRR*LPATAFQLEIS Trigger: TGAAATCTCAAGTTGAAAAGCTGTGGCGGGAAGTCAACGCCTTGAAGGAGATGCAAGCTCTGCAGACAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS GCA 72 bp | CTTCTGAAGCAAGGTAGCACTTCTTATGAACTTTGGTaGCTCGGAGACAGACTGTCTGCAGAGCTTGCATCT | + |
Preference number: 6 (lower is better) Translates to: LLKQGSTSYELW*LGDRLSAELAS Trigger: AGATGCAAGCTCTGCAGACAGTCTGTCTCCGAGGCACCAAAGTTCATAAGAAGTGCTACCTTGCTTCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |
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CDS GCA 72 bp | CAGCTTTTCAACTTGAGATTTCAGGTCGTCATCCTTTaGTTTCACGCGGCGTTTGCTGTGTTTCCTGGCTTT | + |
Preference number: 6 (lower is better) Translates to: QLFNLRFQVVIL*FHAAFAVFPGF Trigger: AAAGCCAGGAAACACAGCAAACGCCGCGTGAAAGCAAAGGATGACGACCTGAAATCTCAAGTTGAAAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009018.4 |