Pregenerated sensors for CLEC2M (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047720Ensembl transcript IDs: ENSMUST00000051283.8, ENSMUST00000203159.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAAATCCAGGTTACCTCAAGTCTTTCAGTTTGGCAGAGACCTGTaGCGAGTTGCCTGGCCCTCACTGGTGACACTGGGACTTCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SKSRLPQVFQFGRDL*RVAWPSLVTLGLQS Trigger: TGACTGAAGTCCCAGTGTCACCAGTGAGGGCCAGGCAACTCGCCACAGGTCTCTGCCAAACTGAAAGACTTGAGGTAACCTGGATTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR GCA 90 bp | GATGGATCACTTCTGAGCAAGGCCCTTCATGGCCATAGCTTCAAATaGACCAACCTCGATGATGCAGCAGTACCACGCCAAGCTTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: DGSLLSKALHGHSFK*TNLDDAAVPRQAWF Trigger: AAACCAAGCTTGGCGTGGTACTGCTGCATCATCGAGGTTGGTGCATTTGAAGCTATGGCCATGAAGGGCCTTGCTCAGAAGTGATCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR GCA 90 bp | AAGGTCACAAAGCTTCTTTTCTTCATGTTCCTCTCTACTTCCGGGTaGTCACGTTCTGTTCATACCGACTCATCACGAAATTTGTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: KVTKLLFFMFLSTSG*SRSVHTDSSRNLCP Trigger: AGGACACAAATTTCGTGATGAGTCGGTATGAACAGAACGTGAGCACCCGGAAGTAGAGAGGAACATGAAGAAAAGAAGCTTTGTGACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR TCA 90 bp | CTATACCTCCCTTTCTTCAAGATCATTTTGGTGTTATCCAGAATCTaGGTGAAACAGCTTTTGGAATTTAGGCTAACCTCCATGGATTCT | + |
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Preference number: 1 (lower is better) Translates to: LYLPFFKIILVLSRI*VKQLLEFRLTSMDS Trigger: AGAATCCATGGAGGTTAGCCTAAATTCCAAAAGCTGTTTCACTCAGATTCTGGATAACACCAAAATGATCTTGAAGAAAGGGAGGTATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR-3UTR TCA 90 bp | GACCTGTGGCGAGTTGCCTGGCCCTCACTGGTGACACTGGGACTTCAGTCACAAGAGATGGATCACTTCTaGGCAAGGCCCTTCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: DLWRVAWPSLVTLGLQSQEMDHF*ARPFMA Trigger: GGCCATGAAGGGCCTTGCTCAGAAGTGATCCATCTC...TTGTGACTGAAGTCCCAGTGTCACCAGTGAGGGCCAGGCAACTCGCCACAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTCCTTTACTCTTTCAGCAACTATGGCAACAGCAAATCCAGGTTACCTCAGTGCTCACCCTGTCCTaGAGCTCTTGTTTTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LCPLLFQQLWQQQIQVTSVLTLS*SSCFSS Trigger: AGAAGAAAAACAAGAGCTGCAGGACAGGGTGAGCAC...TGAGGTAACCTGGATTTGCTGTTGCCATAGTTGCTGAAAGAGTAAAGGACACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR CCA 72 bp | GTCTTTCAGTTTGGCAGAGACCTGTGGCGAGTTGCCTaGCCCTCACTGGTGACACTGGGACTTCAGTCACAA | + |
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Preference number: 3 (lower is better) Translates to: VFQFGRDLWRVA*PSLVTLGLQSQ Trigger: TTGTGACTGAAGTCCCAGTGTCACCAGTGAGGGCCAGGCAACTCGCCACAGGTCTCTGCCAAACTGAAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR CCA 72 bp | AGGTTACCTCAAGTCTTTCAGTTTGGCAGAGACCTGTaGCGAGTTGCCTGGCCCTCACTGGTGACACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: RLPQVFQFGRDL*RVAWPSLVTLG Trigger: TCCCAGTGTCACCAGTGAGGGCCAGGCAACTCGCCACAGGTCTCTGCCAAACTGAAAGACTTGAGGTAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR TCA 72 bp | TGCCCTCTCGTGTGCTCCACTGAGATGGATCACTTCTaGGCAAGGCCCTTCATGGCCATAGCTTCAAATGCA | + |
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Preference number: 3 (lower is better) Translates to: CPLVCSTEMDHF*ARPFMAIASNA Trigger: TGCATTTGAAGCTATGGCCATGAAGGGCCTTGCTCAGAAGTGATCCATCTCAGTGGAGCACACGAGAGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR GCA 72 bp | CTTCTGAGCAAGGCCCTTCATGGCCATAGCTTCAAATaGACCAACCTCGATGATGCAGCAGTACCACGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LLSKALHGHSFK*TNLDDAAVPRQ Trigger: TTGGCGTGGTACTGCTGCATCATCGAGGTTGGTGCATTTGAAGCTATGGCCATGAAGGGCCTTGCTCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR CCA 72 bp | CAACAGCAAATCCAGGTTACCTCAAGTCTTTCAGTTTaGCAGAGACCTGTGGCGAGTTGCCTGGCCCTCACT | + |
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Preference number: 3 (lower is better) Translates to: QQQIQVTSSLSV*QRPVASCLALT Trigger: AGTGAGGGCCAGGCAACTCGCCACAGGTCTCTGCCAAACTGAAAGACTTGAGGTAACCTGGATTTGCTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR TCA 72 bp | TCCTCTTTATTCTTTATGCCCTCTCGTGTGCTCCACTaGGATGGATCACTTCTGAGCAAGGCCCTTCATGGC | + |
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Preference number: 3 (lower is better) Translates to: SSLFFMPSRVLH*DGSLLSKALHG Trigger: GCCATGAAGGGCCTTGCTCAGAAGTGATCCATCTCAGTGGAGCACACGAGAGGGCATAAAGAATAAAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR GCA 72 bp | AAGCTTCTTTTCTTCATGTTCCTCTCTACTTCCGGGTaGTCACGTTCTGTTCATACCGACTCATCACGAAAT | + |
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Preference number: 3 (lower is better) Translates to: KLLFFMFLSTSG*SRSVHTDSSRN Trigger: ATTTCGTGATGAGTCGGTATGAACAGAACGTGAGCACCCGGAAGTAGAGAGGAACATGAAGAAAAGAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR GCA 72 bp | AAATGTGCTCTGTGGAGAGGAACCCATGCAAACTCTTaGTGTTCTTTTGCTAGCCATCAACATTTAACCTCC | + |
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Preference number: 3 (lower is better) Translates to: KCALWRGTHANS*CSFASHQHLTS Trigger: GGAGGTTAAATGTTGATGGCTAGCAAAAGAACAGCAAGAGTTTGCATGGGTTCCTCTCCACAGAGCACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203159.2 |
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| 3UTR-3UTR CAA 90 bp | AATGTCTATACCTCCCTTTCTTCAAGATCATTTTGGTGTTATCCAGAATCTGAGCCTGTCCTGCAGCTCTaGTTTTTCTTCTGGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: NVYTSLSSRSFWCYPESEPVLQL*FFFWKM Trigger: CATCTTCCAGAAGAAAAACAAGAGCTGCAGGACAGG...CTCAGATTCTGGATAACACCAAAATGATCTTGAAGAAAGGGAGGTATAGACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR CCA 72 bp | TCACGAAATTTGTGTCCTTTACTCTTTCAGCAACTATaGCAACAGCAAATCCAGGTTACCTCAAGTCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: SRNLCPLLFQQL*QQQIQVTSSLS Trigger: TGAAAGACTTGAGGTAACCTGGATTTGCTGTTGCCATAGTTGCTGAAAGAGTAAAGGACACAAATTTCGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR TCA 72 bp | AGTTTCTCCCCTTTTGCCTTCCTTCACAGTTCAACGTaGATCATGTATTATTTGAGGGCAAACAAAGCATTT | + |
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Preference number: 3 (lower is better) Translates to: SFSPFAFLHSST*IMYYLRANKAF Trigger: AAATGCTTTGTTTGCCCTCAAATAATACATGATTCACGTTGAACTGTGAAGGAAGGCAAAAGGGGAGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAAATCCAGGTTACCTCAAGTCTTTCAGTTTGGCAGAGACCTGTGGCGAGCGAGAGAAGCAGTTCTaGCGTAGTTTGTTCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TANPGYLKSFSLAETCGEREKQF*RSLFQS Trigger: AGACTGGAACAAACTACGTCAGAACTGCTTCTCTCG...CTCGCCACAGGTCTCTGCCAAACTGAAAGACTTGAGGTAACCTGGATTTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR CAA 72 bp | GCCCTTTTGATGCACGAAGGCACACTGACCATGATCTaGGATCTCATGCCTGGAAGAAAACAAAGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: ALLMHEGTLTMI*DLMPGRKQRDD Trigger: GTCATCCCTTTGTTTTCTTCCAGGCATGAGATCCAAGATCATGGTCAGTGTGCCTTCGTGCATCAAAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203159.2 |
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| CDS-3UTR GCA 90 bp | TGTCGATGGAAAGGAATACACATCACAGACAAAACGAGACACTGCTCTTCGTGTGAACACAGCCAGAGTTaGATCATGGAGTTCGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CRWKGIHITDKTRHCSSCEHSQS*IMEFAG Trigger: ACCTGCGAACTCCATGATGCAACTCTGGCTGTGTTC...ACACGAAGAGCAGTGTCTCGTTTTGTCTGTGATGTGTATTCCTTTCCATCGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS-3UTR TCA 90 bp | GTGATGTCGATGGAAAGGAATACACATCACAGACAAAACGAGACACTGCTCTTCCTTCAGTTTTGTCGATaGACACAGCCAGAGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: VMSMERNTHHRQNETLLFLQFCR*TQPELH Trigger: ATGCAACTCTGGCTGTGTTCATCGACAAAACTGAAG...GAAGAGCAGTGTCTCGTTTTGTCTGTGATGTGTATTCCTTTCCATCGACATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051283.8 ENSMUST00000203159.2 |
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| CDS-3UTR TCA 90 bp | TGTCCTGCAGCTCTTGTTTTTCTTCTGGAAGATGTCACTGAATTTTGGACAAGCCTTCAGTTTTGTCGATaGACACAGCCAGAGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: CPAALVFLLEDVTEFWTSLQFCR*TQPELH Trigger: ATGCAACTCTGGCTGTGTTCATCGACAAAACTGAAG...GCTTGTCCAAAATTCAGTGACATCTTCCAGAAGAAAAACAAGAGCTGCAGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| 3UTR CAA 72 bp | AGGGCACTGGCCTTCTCTGGTACAAATAAATTCTTTTaGATCCTCACAACTGGTACTGTCTATGCCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RALAFSGTNKFF*ILTTGTVYALL Trigger: CAAAAGGGCATAGACAGTACCAGTTGTGAGGATCAAAAAGAATTTATTTGTACCAGAGAAGGCCAGTGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203159.2 |
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| CDS-3UTR CCA 90 bp | AATGTCTATACCTCCCTTTCTTCAAGATCATTTTGGTGTTATCCAGAATCTGAGTTTGATCCTCACAACTaGTACTGTCTATGCCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: NVYTSLSSRSFWCYPESEFDPHN*YCLCPF Trigger: AAAAGGGCATAGACAGTACCAGTTGTGAGGATCAAA...CTCAGATTCTGGATAACACCAAAATGATCTTGAAGAAAGGGAGGTATAGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS GCA 90 bp | CATCAAAATTTCCACTTCAGTTTTGTCGATGAACACAGCCAGAGTTaGATCATGGAGTTCGCAGGTGTCGTTGGCAGTAAGCCACGAGTT | + |
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Preference number: 5 (lower is better) Translates to: HQNFHFSFVDEHSQS*IMEFAGVVGSKPRV Trigger: AACTCGTGGCTTACTGCCAACGACACCTGCGAACTCCATGATGCAACTCTGGCTGTGTTCATCGACAAAACTGAAGTGGAAATTTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS CCA 72 bp | TCAGTTTTGTCGATGAACACAGCCAGAGTTGCATCATaGAGTTCGCAGGTGTCGTTGGCAGTAAGCCACGAG | + |
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Preference number: 6 (lower is better) Translates to: SVLSMNTARVAS*SSQVSLAVSHE Trigger: CTCGTGGCTTACTGCCAACGACACCTGCGAACTCCATGATGCAACTCTGGCTGTGTTCATCGACAAAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS CAA 72 bp | CATCGAACATTAACCTGTGATGCCTGCGTTCATGGCTaGTCTGAGGTAGTCTGGGTGAAGTGTCGGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: HRTLTCDACVHG*SEVVWVKCRSA Trigger: TGCAGACCGACACTTCACCCAGACTACCTCAGACAAGCCATGAACGCAGGCATCACAGGTTAATGTTCGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS GCA 72 bp | TTCCACTTCAGTTTTGTCGATGAACACAGCCAGAGTTaGATCATGGAGTTCGCAGGTGTCGTTGGCAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FHFSFVDEHSQS*IMEFAGVVGSK Trigger: CTTACTGCCAACGACACCTGCGAACTCCATGATGCAACTCTGGCTGTGTTCATCGACAAAACTGAAGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS CAA 72 bp | ACAGCCAGAGTTGCATCATGGAGTTCGCAGGTGTCGTaGGCAGTAAGCCACGAGTTTTTATGTTGGATACGA | + |
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Preference number: 6 (lower is better) Translates to: TARVASWSSQVS*AVSHEFLCWIR Trigger: TCGTATCCAACATAAAAACTCGTGGCTTACTGCCAACGACACCTGCGAACTCCATGATGCAACTCTGGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS CAA 72 bp | TCTTTAGGGCACAGCTTTACCTCGTCGTCACATGTCTaGTTTCTGGCTGTTCTTGTAACTGTAAATTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SLGHSFTSSSHV*FLAVLVTVNFL Trigger: TAGAAAATTTACAGTTACAAGAACAGCCAGAAACAAGACATGTGACGACGAGGTAAAGCTGTGCCCTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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| CDS CAA 90 bp | GACCATGATCTTGGATCTCATGCAAATTGTTGTATTTACTTCCATTaGTCCAAACCCAGATTCCTAATAAATTTTGTCTGTGCAGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: DHDLGSHANCCIYFH*SKPRFLINFVCAVQ Trigger: TTGGACTGCACAGACAAAATTTATTAGGAATCTGGGTTTGGACAAATGGAAGTAAATACAACAATTTGCATGAGATCCAAGATCATGGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051283.8 |
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