Pregenerated sensors for CLEC2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079598Ensembl transcript IDs: ENSMUST00000114874.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTAGCCCTGGGCTGTTTTCTCCAAGGTGTGGAGGAAGCTGTGCCTaGCTGTCTCACCCAGCAGTCTCAGAGAAGCCACAGGGGCGGGCA | + |
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Preference number: 1 (lower is better) Translates to: SSPGLFSPRCGGSCA*LSHPAVSEKPQGRA Trigger: TGCCCGCCCCTGTGGCTTCTCTGAGACTGCTGGGTGAGACAGGCAGGCACAGCTTCCTCCACACCTTGGAGAAAACAGCCCAGGGCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR CCA 90 bp | TCTCACCCAGCAGTCTCAGAGAAGCCACAGGGGCGGGCAGGAGGCTaGGCCAGAAGTCATATAACCCGTGTGTCGCCCCATCTGTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SHPAVSEKPQGRAGG*ARSHITRVSPHLSR Trigger: TCTGGACAGATGGGGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCCTGTGGCTTCTCTGAGACTGCTGGGTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR TCA 90 bp | GGACAAGAGGGACCAGGAACCAAGGCCTTTCGGAGCTCTGGAGCCTaGAAGGGGACAGTGGCAGAGGCCACCCTCCCCACTACTTCCATT | + |
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Preference number: 1 (lower is better) Translates to: GQEGPGTKAFRSSGA*KGTVAEATLPTTSI Trigger: AATGGAAGTAGTGGGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGAAAGGCCTTGGTTCCTGGTCCCTCTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR TCA 90 bp | GTGTGCTTGTGTGTATGGGGCAAGATGTCTACACTACTTAGCATATaGGATATAACTGCTAGGCCACAGGACCTGCCTGGGGACAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: VCLCVWGKMSTLLSI*DITARPQDLPGDKR Trigger: CCTCTTGTCCCCAGGCAGGTCCTGTGGCCTAGCAGTTATATCTCATATGCTAAGTAGTGTAGACATCTTGCCCCATACACACAAGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTTTCGGAGCTCTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCACTGCCCTTGGGCCTaGGCACAGGGGCCACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RPFGALEPERGQWQRPPSHCPWA*AQGPPL Trigger: CAGAGGTGGCCCCTGTGCCCAGGCCCAAGGGCAGTG...GGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGAAAGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTTCGGAGCTCTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCAACGGACACTGCCCTTaGGCCTGGGCACAGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GLSELWSLKGDSGRGHPPNGHCP*AWAQGP Trigger: TGGCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTT...GGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGAAAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCCCTGAAAGGGGACAGTaGCAGAGGCCACCCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: ATGAGRRLGQKSYNPCVAPERGQ*QRPPSP Trigger: TGGGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGG...GGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCCTGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCCCATCTTTGTGGAACGGACACTaGCCTTGGGCCTGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: GAGRRLGQKSYNPCVAPSLWNGH*PWAWAQ Trigger: CTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAA...AGATGGGGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCCCATCTCAGAAGCACCAGGGCTaGAGTGAGGGAGGGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GAGRRLGQKSYNPCVAPSQKHQG*SEGGFQ Trigger: CTGGAACCCTCCCTCACTGCAGCCCTGGTGCTTCTG...AGATGGGGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR CAA 90 bp | CACTACTTCCATTCAGAGAGGGTGGCGGCTCCTGTTGGAAGCAAGTaGTGGAACGGACACTGCCCTTGGGCCTGGGCACAGGGGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: HYFHSERVAAPVGSK*WNGHCPWAWAQGPP Trigger: AGGTGGCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGGAGCCGCCACCCTCTCTGAATGGAAGTAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTTTCGGAGCTCTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCTCCATTCAGAGAGGGTaGCGGCTCCTGTTGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: RPFGALEPERGQWQRPPSSIQRG*RLLLEA Trigger: TGCTTCCAACAGGAGCCGCCACCCTCTCTGAATGGA...GGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGAAAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR CCA 90 bp | CTTTCGGAGCTCTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCCACGTTGGAAGCAAGTTGTaGAACGGACACTGCCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LSELWSLKGDSGRGHPPHVGSKL*NGHCPW Trigger: CCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAAC...GTGGGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR GCA 72 bp | GCGGCTCCTGTTGGAAGCAAGTTGTGGAACGGACACTaGCCTTGGGCCTGGGCACAGGGGCCACCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: AAPVGSKLWNGH*PWAWAQGPPLA Trigger: GGCCAGAGGTGGCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGGAGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR CCA 72 bp | TCAGAGAGGGTGGCGGCTCCTGTTGGAAGCAAGTTGTaGAACGGACACTGCCCTTGGGCCTGGGCACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SERVAAPVGSKL*NGHCPWAWAQG Trigger: CCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGGAGCCGCCACCCTCTCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR CAA 90 bp | GGGCAGAAAGAGCAGCCTCTAGCCCTGGGCTGTTTTCTCCAAGGTGTGGAGGAAGAACGGACACTGCCCTaGGGCCTGGGCACAGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: GQKEQPLALGCFLQGVEEERTLP*GLGTGA Trigger: GGCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTC...TTCCTCCACACCTTGGAGAAAACAGCCCAGGGCTAGAGGCTGCTCTTTCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR CCA 72 bp | GCAGTCTCAGAGAAGCCACAGGGGCGGGCAGGAGGCTaGGCCAGAAGTCATATAACCCGTGTGTCGCCCCAT | + |
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Preference number: 3 (lower is better) Translates to: AVSEKPQGRAGG*ARSHITRVSPH Trigger: ATGGGGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCCTGTGGCTTCTCTGAGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR CAA 90 bp | TCGGAGCTCTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCCACTACCCTGTTGGAAGCAAGTaGTGGAACGGACACTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: SELWSLKGDSGRGHPPHYPVGSK*WNGHCP Trigger: AGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGG...GTAGTGGGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR GCA 72 bp | CCCTGGGCTGTTTTCTCCAAGGTGTGGAGGAAGCTGTaGCTGCCTGTCTCACCCAGCAGTCTCAGAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: PWAVFSKVWRKL*LPVSPSSLREA Trigger: GGCTTCTCTGAGACTGCTGGGTGAGACAGGCAGGCACAGCTTCCTCCACACCTTGGAGAAAACAGCCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR-3UTR CAA 90 bp | AGGAAGCTGTGCCTGCCTGTCTCACCCAGCAGTCTCAGAGAAGCCACAGGGGCGTGTACACGTGTGTGCTaGTGTGTATGGGGCAAGATG | + |
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Preference number: 3 (lower is better) Translates to: RKLCLPVSPSSLREATGACTRVC*CVWGKM Trigger: CATCTTGCCCCATACACACAAGCACACACGTGTACA...CGCCCCTGTGGCTTCTCTGAGACTGCTGGGTGAGACAGGCAGGCACAGCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR CCA 72 bp | CCACTACTTCCATTCAGAGAGGGTGGCGGCTCCTGTTaGAAGCAAGTTGTGGAACGGACACTGCCCTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PLLPFREGGGSC*KQVVERTLPLG Trigger: GCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGGAGCCGCCACCCTCTCTGAATGGAAGTAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR TCA 72 bp | TGTGTATGGGGCAAGATGTCTACACTACTTAGCATATaGGATATAACTGCTAGGCCACAGGACCTGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: CVWGKMSTLLSI*DITARPQDLPG Trigger: CCCAGGCAGGTCCTGTGGCCTAGCAGTTATATCTCATATGCTAAGTAGTGTAGACATCTTGCCCCATACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR TCA 90 bp | GCCTGTCTCACCCAGCAGTCTCAGAGAAGCCACAGGGGCGGGCAGGAGGCTGGGGCTGCCCTCGTAGCCTaGCCCGGATCGCCTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ACLTQQSQRSHRGGQEAGAALVA*PGSPQQ Trigger: CTGCTGAGGCGATCCGGGTCAGGCTACGAGGGCAGC...CCCAGCCTCCTGCCCGCCCCTGTGGCTTCTCTGAGACTGCTGGGTGAGACAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR GCA 90 bp | CTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCCACTACTTCCATTCTGGGCCACGGGCCTCTaGCTCCGCTGGAGAGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: LEPERGQWQRPPSPLLPFWATGL*LRWRAR Trigger: CCGCGCTCTCCAGCGGAGGCAGAGGCCCGTGGCCCA...GAATGGAAGTAGTGGGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR GCA 90 bp | GCCACAGGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCCCGCCTTCCAGCTGGTaGTGCCCTCGTAGCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: ATGAGRRLGQKSYNPCVAPPSSW*CPRSLT Trigger: GGTCAGGCTACGAGGGCAGCACCAGCTGGAAGGCGG...GGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCCTGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | CTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCCACTACTTCCATTCCCTCAGCAGCCCCTCTaGGCCACGGGCCTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LEPERGQWQRPPSPLLPFPQQPL*ATGLCL Trigger: GAGGCAGAGGCCCGTGGCCCAGAGGGGCTGCTGAGG...GAATGGAAGTAGTGGGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | GGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCCCATCTAGGCCGCCTTCCAGCTaGTGCTGCCCTCGTAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GAGRRLGQKSYNPCVAPSRPPSS*CCPRSL Trigger: CAGGCTACGAGGGCAGCACCAGCTGGAAGGCGGCCT...AGATGGGGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR TCA 90 bp | GCCACAGGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCCAAACGGGTCCCCATTaGCCCAGTGGAAGTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ATGAGRRLGQKSYNPCVAQTGPH*PSGSRP Trigger: GGGACGACTTCCACTGGGTCAATGGGGACCCGTTTG...GGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCCTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR GCA 90 bp | CTGTTGGAAGCAAGTTGTGGAACGGACACTGCCCTTGGGCCTGGGCACAGGGGCCCTTCCAGCTGGTGCTaGCCTCGTAGCCTGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: LLEASCGTDTALGPGHRGPSSWC*PRSLTR Trigger: CCGGGTCAGGCTACGAGGGCAGCACCAGCTGGAAGG...GCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | GCCTGTCTCACCCAGCAGTCTCAGAGAAGCCACAGGGGCGGGCAGGAGGCTGGGACAGGAGGACTGCAATaGCTCCCAGCAGAAGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: ACLTQQSQRSHRGGQEAGTGGLQ*LPAEGV Trigger: CACGCCTTCTGCTGGGAGCCATTGCAGTCCTCCTGT...CCCAGCCTCCTGCCCGCCCCTGTGGCTTCTCTGAGACTGCTGGGTGAGACAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | GGCCTTTCGGAGCTCTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCAGTTCCTTCTGGCTTTaGATCACGGCCAGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GLSELWSLKGDSGRGHPPSSFWL*ITASAA Trigger: GGCGGCGCTGGCCGTGATCCAAAGCCAGAAGGAACT...GGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGAAAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR TCA 90 bp | GAAGCAAGTTGTGGAACGGACACTGCCCTTGGGCCTGGGCACAGGGGCCACCTCTGTCAGACATTCCGTTaGCACCAGCCTGGTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EASCGTDTALGPGHRGHLCQTFR*HQPGGL Trigger: GAGCCCACCAGGCTGGTGTCAACGGAATGTCTGACA...GAGGTGGCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR GCA 90 bp | TGCCTGCCTGTCTCACCCAGCAGTCTCAGAGAAGCCACAGGGGCGGGCAGGAGGCCTTGGAAGCCAGGATaGTCATCACCACCAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: CLPVSPSSLREATGAGRRPWKPG*SSPPEW Trigger: CCATTCTGGTGGTGATGAGCATCCTGGCTTCCAAGG...CCTCCTGCCCGCCCCTGTGGCTTCTCTGAGACTGCTGGGTGAGACAGGCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR GCA 90 bp | AGGAAGCTGTGCCTGCCTGTCTCACCCAGCAGTCTCAGAGAAGCCACAGGGGCGACGTATAGGCCATCTTaGTGCACACCCAGGGACGGG | + |
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Preference number: 4 (lower is better) Translates to: RKLCLPVSPSSLREATGATYRPS*CTPRDG Trigger: CCCGTCCCTGGGTGTGCAGCAAGATGGCCTATACGT...CGCCCCTGTGGCTTCTCTGAGACTGCTGGGTGAGACAGGCAGGCACAGCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | CCTGTTGGAAGCAAGTTGTGGAACGGACACTGCCCTTGGGCCTGGGCACAGGGGGCCGCCTCGTGTGTATaGCAGTACTGCCTTCCCGTA | + |
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Preference number: 4 (lower is better) Translates to: PVGSKLWNGHCPWAWAQGAASCV*QYCLPV Trigger: TACGGGAAGGCAGTACTGCCATACACACGAGGCGGC...CCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR GCA 90 bp | AAGCAAGTTGTGGAACGGACACTGCCCTTGGGCCTGGGCACAGGGGCCACCTCTGGCAAACAGGAGGACTaGAATGGCTCCCAGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KQVVERTLPLGLGTGATSGKQED*NGSQQK Trigger: CTTCTGCTGGGAGCCATTGCAGTCCTCCTGTTTGCC...AGAGGTGGCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTGGCGGCTCCTGTTGGAAGCAAGTTGTGGAACGGACACTGCCCTTGGGCTATAGGCCATCTTGCTaGACACCCAGGGACGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: EGGGSCWKQVVERTLPLGYRPSC*TPRDGL Trigger: CAACCCGTCCCTGGGTGTGCAGCAAGATGGCCTATA...GCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGGAGCCGCCACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | TGCCTGCCTGTCTCACCCAGCAGTCTCAGAGAAGCCACAGGGGCGGGCAGGAGGAATTCCAGTTCCTTCTaGCTTTGGATCACGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLPVSPSSLREATGAGRRNSSSF*LWITAS Trigger: GCTGGCCGTGATCCAAAGCCAGAAGGAACTGGAATT...CCTCCTGCCCGCCCCTGTGGCTTCTCTGAGACTGCTGGGTGAGACAGGCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | CTGTTGGAAGCAAGTTGTGGAACGGACACTGCCCTTGGGCCTGGGCACAGGGGCTCCCCATTGACCCAGTaGAAGTCGTCCCCAACTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLEASCGTDTALGPGHRGSPLTQ*KSSPTL Trigger: CAGAGTTGGGGACGACTTCCACTGGGTCAATGGGGA...GCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | GCCACAGGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCTTGACACCAGCCTGGTaGGCTCCACAAAGACACATT | + |
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Preference number: 4 (lower is better) Translates to: ATGAGRRLGQKSYNPCVALTPAW*APQRHI Trigger: AATGTGTCTTTGTGGAGCCCACCAGGCTGGTGTCAA...GGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCCTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | GGGGACAAGAGGGACCAGGAACCAAGGCCTTTCGGAGCTCTGGAGCCTGAAAGGCCGTTGACACCAGCCTaGTGGGCTCCACAAAGACAC | + |
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Preference number: 4 (lower is better) Translates to: GDKRDQEPRPFGALEPERPLTPA*WAPQRH Trigger: GTGTCTTTGTGGAGCCCACCAGGCTGGTGTCAACGG...CCTTTCAGGCTCCAGAGCTCCGAAAGGCCTTGGTTCCTGGTCCCTCTTGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| 3UTR CAA 72 bp | CCCACTACTTCCATTCAGAGAGGGTGGCGGCTCCTGTaGGAAGCAAGTTGTGGAACGGACACTGCCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PTTSIQRGWRLL*EASCGTDTALG Trigger: CCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGGAGCCGCCACCCTCTCTGAATGGAAGTAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR TCA 90 bp | GGGCAGAAAGAGCAGCCTCTAGCCCTGGGCTGTTTTCTCCAAGGTGTGGAGGAAAGGGTGTCTCACACTTaGTGCAGCCCTTGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GQKEQPLALGCFLQGVEERVSHT*CSPWKP Trigger: TGGCTTCCAAGGGCTGCATCAAGTGTGAGACACCCT...TTCCTCCACACCTTGGAGAAAACAGCCCAGGGCTAGAGGCTGCTCTTTCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | CTGTTGGAAGCAAGTTGTGGAACGGACACTGCCCTTGGGCCTGGGCACAGGGGCTCATCACCACCAGAATaGCAAACAGGAGGACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LLEASCGTDTALGPGHRGSSPPE*QTGGLQ Trigger: TTGCAGTCCTCCTGTTTGCCATTCTGGTGGTGATGA...GCCCCTGTGCCCAGGCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CCA 90 bp | CTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCCACTACTTCCATTCGATAGTGAATGTGTCTaGGTCAAACGGGTCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: LEPERGQWQRPPSPLLPFDSECV*VKRVPI Trigger: AATGGGGACCCGTTTGACCCAGACACATTCACTATC...GAATGGAAGTAGTGGGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS GCA 90 bp | GAAGGCGTGTGGTGGTATCCTCCAAGGCCGCCTTCCAGCTGGTGCTaGCCTCGTAGCCTGACCCGGATCGCCTCAGCAGCCCCTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: EGVWWYPPRPPSSWC*PRSLTRIASAAPLG Trigger: GCCCAGAGGGGCTGCTGAGGCGATCCGGGTCAGGCTACGAGGGCAGCACCAGCTGGAAGGCGGCCTTGGAGGATACCACCACACGCCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS GCA 90 bp | GCAGAAGGCGTGTGGTGGTATCCTCCAAGGCCGCCTTCCAGCTGGTaGTGCCCTCGTAGCCTGACCCGGATCGCCTCAGCAGCCCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: AEGVWWYPPRPPSSW*CPRSLTRIASAAPL Trigger: CAGAGGGGCTGCTGAGGCGATCCGGGTCAGGCTACGAGGGCAGCACCAGCTGGAAGGCGGCCTTGGAGGATACCACCACACGCCTTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 90 bp | CCAGCAGAAGGCGTGTGGTGGTATCCTCCAAGGCCGCCTTCCAGCTaGTGCTGCCCTCGTAGCCTGACCCGGATCGCCTCAGCAGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: PAEGVWWYPPRPPSS*CCPRSLTRIASAAP Trigger: AGGGGCTGCTGAGGCGATCCGGGTCAGGCTACGAGGGCAGCACCAGCTGGAAGGCGGCCTTGGAGGATACCACCACACGCCTTCTGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CAA 90 bp | GGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCCCATCTCAGGGTGTCTCACACTaGATGCAGCCCTTGGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: GAGRRLGQKSYNPCVAPSQGVSH*MQPLEA Trigger: GGCTTCCAAGGGCTGCATCAAGTGTGAGACACCCTG...AGATGGGGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CAA 90 bp | GGGGACAAGAGGGACCAGGAACCAAGGCCTTTCGGAGCTCTGGAGCCTGAAAGGCAGTTCCTTCTGGCTTaGGATCACGGCCAGCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GDKRDQEPRPFGALEPERQFLLA*DHGQRR Trigger: GCGGCGCTGGCCGTGATCCAAAGCCAGAAGGAACTG...CCTTTCAGGCTCCAGAGCTCCGAAAGGCCTTGGTTCCTGGTCCCTCTTGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CAA 90 bp | GGGGCGGGCAGGAGGCTGGGCCAGAAGTCATATAACCCGTGTGTCGCCCCATCTTCAAACGGGTCCCCATaGACCCAGTGGAAGTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: GAGRRLGQKSYNPCVAPSSNGSP*TQWKSS Trigger: GGACGACTTCCACTGGGTCAATGGGGACCCGTTTGA...AGATGGGGCGACACACGGGTTATATGACTTCTGGCCCAGCCTCCTGCCCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 90 bp | GAATGGCAAACAGGAGGACTGCAATGGCTCCCAGCAGAAGGCGTGTaGTGGTATCCTCCAAGGCCGCCTTCCAGCTGGTGCTGCCCTCGT | + |
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Preference number: 5 (lower is better) Translates to: EWQTGGLQWLPAEGV*WYPPRPPSSWCCPR Trigger: ACGAGGGCAGCACCAGCTGGAAGGCGGCCTTGGAGGATACCACCACACGCCTTCTGCTGGGAGCCATTGCAGTCCTCCTGTTTGCCATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CAA 90 bp | CTTTCGGAGCTCTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCCCACCACTTGATGCAGCCCTaGGAAGCCAGGATGCTCATC | + |
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Preference number: 5 (lower is better) Translates to: LSELWSLKGDSGRGHPPHHLMQP*EARMLI Trigger: GATGAGCATCCTGGCTTCCAAGGGCTGCATCAAGTG...GTGGGGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 90 bp | GAGATAGTGAATGTGTCTGGGTCAAACGGGTCCCCATTGACCCAGTaGAAGTCGTCCCCAACTCTGCGCAGGCCGATCCAGGGCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: EIVNVSGSNGSPLTQ*KSSPTLRRPIQGSL Trigger: GAGGGAGCCCTGGATCGGCCTGCGCAGAGTTGGGGACGACTTCCACTGGGTCAATGGGGACCCGTTTGACCCAGACACATTCACTATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CAA 90 bp | GAGGGTGGCGGCTCCTGTTGGAAGCAAGTTGTGGAACGGACACTGCCCTTGGGCTTGTCAGACATTCCGTaGACACCAGCCTGGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: EGGGSCWKQVVERTLPLGLSDIP*TPAWWA Trigger: AGCCCACCAGGCTGGTGTCAACGGAATGTCTGACAA...GCCCAAGGGCAGTGTCCGTTCCACAACTTGCTTCCAACAGGAGCCGCCACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS TCA 90 bp | GGCCATCTTGCTGCACACCCAGGGACGGGTTGTCAGACATTCCGTTaGCACCAGCCTGGTGGGCTCCACAAAGACACATTCCCCCATACC | + |
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Preference number: 5 (lower is better) Translates to: GHLAAHPGTGCQTFR*HQPGGLHKDTFPHT Trigger: GGTATGGGGGAATGTGTCTTTGTGGAGCCCACCAGGCTGGTGTCAACGGAATGTCTGACAACCCGTCCCTGGGTGTGCAGCAAGATGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 90 bp | CCAGGATGCTCATCACCACCAGAATGGCAAACAGGAGGACTGCAATaGCTCCCAGCAGAAGGCGTGTGGTGGTATCCTCCAAGGCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: PGCSSPPEWQTGGLQ*LPAEGVWWYPPRPP Trigger: AGGCGGCCTTGGAGGATACCACCACACGCCTTCTGCTGGGAGCCATTGCAGTCCTCCTGTTTGCCATTCTGGTGGTGATGAGCATCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS GCA 90 bp | GGAAGCCAGGATGCTCATCACCACCAGAATGGCAAACAGGAGGACTaGAATGGCTCCCAGCAGAAGGCGTGTGGTGGTATCCTCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GSQDAHHHQNGKQED*NGSQQKACGGILQG Trigger: GCCTTGGAGGATACCACCACACGCCTTCTGCTGGGAGCCATTGCAGTCCTCCTGTTTGCCATTCTGGTGGTGATGAGCATCCTGGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS-3UTR CAA 90 bp | AGGCCTTTCGGAGCTCTGGAGCCTGAAAGGGGACAGTGGCAGAGGCCACCCTCCTCCCTCCGTGTGAACTaGAACATAAATTCCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: RPFGALEPERGQWQRPPSSLRVN*NINSSS Trigger: GGAACTGGAATTTATGTTCAAGTTCACACGGAGGGA...GGAGGGTGGCCTCTGCCACTGTCCCCTTTCAGGCTCCAGAGCTCCGAAAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 90 bp | CAGGGCTCCCTCCGTGTGAACTTGAACATAAATTCCAGTTCCTTCTaGCTTTGGATCACGGCCAGCGCCGCCTCGTGTGTATGGCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: QGSLRVNLNINSSSF*LWITASAASCVWQY Trigger: GTACTGCCATACACACGAGGCGGCGCTGGCCGTGATCCAAAGCCAGAAGGAACTGGAATTTATGTTCAAGTTCACACGGAGGGAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS TCA 72 bp | CAAGGCCGCCTTCCAGCTGGTGCTGCCCTCGTAGCCTaGCCCGGATCGCCTCAGCAGCCCCTCTGGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: QGRLPAGAALVA*PGSPQQPLWAT Trigger: CGTGGCCCAGAGGGGCTGCTGAGGCGATCCGGGTCAGGCTACGAGGGCAGCACCAGCTGGAAGGCGGCCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS GCA 72 bp | TGGTGGTATCCTCCAAGGCCGCCTTCCAGCTGGTGCTaGCCTCGTAGCCTGACCCGGATCGCCTCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: WWYPPRPPSSWC*PRSLTRIASAA Trigger: GGCTGCTGAGGCGATCCGGGTCAGGCTACGAGGGCAGCACCAGCTGGAAGGCGGCCTTGGAGGATACCACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | GGCGTGTGGTGGTATCCTCCAAGGCCGCCTTCCAGCTaGTGCTGCCCTCGTAGCCTGACCCGGATCGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GVWWYPPRPPSS*CCPRSLTRIAS Trigger: TGAGGCGATCCGGGTCAGGCTACGAGGGCAGCACCAGCTGGAAGGCGGCCTTGGAGGATACCACCACACGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS GCA 72 bp | GTGTGGTGGTATCCTCCAAGGCCGCCTTCCAGCTGGTaGTGCCCTCGTAGCCTGACCCGGATCGCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VWWYPPRPPSSW*CPRSLTRIASA Trigger: TGCTGAGGCGATCCGGGTCAGGCTACGAGGGCAGCACCAGCTGGAAGGCGGCCTTGGAGGATACCACCACAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | ACAGGAGGACTGCAATGGCTCCCAGCAGAAGGCGTGTaGTGGTATCCTCCAAGGCCGCCTTCCAGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: TGGLQWLPAEGV*WYPPRPPSSWC Trigger: GCACCAGCTGGAAGGCGGCCTTGGAGGATACCACCACACGCCTTCTGCTGGGAGCCATTGCAGTCCTCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | TGGCTTTGGATCACGGCCAGCGCCGCCTCGTGTGTATaGCAGTACTGCCTTCCCGTATTCCAGTCCCTAGGT | + |
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Preference number: 6 (lower is better) Translates to: WLWITASAASCV*QYCLPVFQSLG Trigger: ACCTAGGGACTGGAATACGGGAAGGCAGTACTGCCATACACACGAGGCGGCGCTGGCCGTGATCCAAAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | AATGTGTCTGGGTCAAACGGGTCCCCATTGACCCAGTaGAAGTCGTCCCCAACTCTGCGCAGGCCGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: NVSGSNGSPLTQ*KSSPTLRRPIQ Trigger: CTGGATCGGCCTGCGCAGAGTTGGGGACGACTTCCACTGGGTCAATGGGGACCCGTTTGACCCAGACACATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CAA 90 bp | CCCATACCCGAGATAGTGAATGTGTCTGGGTCAAACGGGTCCCCATaGACCCAGTGGAAGTCGTCCCCAACTCTGCGCAGGCCGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: PIPEIVNVSGSNGSP*TQWKSSPTLRRPIQ Trigger: CTGGATCGGCCTGCGCAGAGTTGGGGACGACTTCCACTGGGTCAATGGGGACCCGTTTGACCCAGACACATTCACTATCTCGGGTATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CAA 90 bp | AGGCCATCTTGCTGCACACCCAGGGACGGGTTGTCAGACATTCCGTaGACACCAGCCTGGTGGGCTCCACAAAGACACATTCCCCCATAC | + |
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Preference number: 6 (lower is better) Translates to: RPSCCTPRDGLSDIP*TPAWWAPQRHIPPY Trigger: GTATGGGGGAATGTGTCTTTGTGGAGCCCACCAGGCTGGTGTCAACGGAATGTCTGACAACCCGTCCCTGGGTGTGCAGCAAGATGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS TCA 72 bp | GCTGCACACCCAGGGACGGGTTGTCAGACATTCCGTTaGCACCAGCCTGGTGGGCTCCACAAAGACACATTC | + |
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Preference number: 6 (lower is better) Translates to: AAHPGTGCQTFR*HQPGGLHKDTF Trigger: GAATGTGTCTTTGTGGAGCCCACCAGGCTGGTGTCAACGGAATGTCTGACAACCCGTCCCTGGGTGTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | AGGGACGGGTTGTCAGACATTCCGTTGACACCAGCCTaGTGGGCTCCACAAAGACACATTCCCCCATACCCG | + |
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Preference number: 6 (lower is better) Translates to: RDGLSDIPLTPA*WAPQRHIPPYP Trigger: CGGGTATGGGGGAATGTGTCTTTGTGGAGCCCACCAGGCTGGTGTCAACGGAATGTCTGACAACCCGTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CAA 72 bp | ACGTATAGGCCATCTTGCTGCACACCCAGGGACGGGTaGTCAGACATTCCGTTGACACCAGCCTGGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TYRPSCCTPRDG*SDIPLTPAWWA Trigger: AGCCCACCAGGCTGGTGTCAACGGAATGTCTGACAACCCGTCCCTGGGTGTGCAGCAAGATGGCCTATACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | GACGGGTTGTCAGACATTCCGTTGACACCAGCCTGGTaGGCTCCACAAAGACACATTCCCCCATACCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: DGLSDIPLTPAW*APQRHIPPYPR Trigger: TCTCGGGTATGGGGGAATGTGTCTTTGTGGAGCCCACCAGGCTGGTGTCAACGGAATGTCTGACAACCCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CAA 72 bp | TGCTGCACACCCAGGGACGGGTTGTCAGACATTCCGTaGACACCAGCCTGGTGGGCTCCACAAAGACACATT | + |
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Preference number: 6 (lower is better) Translates to: CCTPRDGLSDIP*TPAWWAPQRHI Trigger: AATGTGTCTTTGTGGAGCCCACCAGGCTGGTGTCAACGGAATGTCTGACAACCCGTCCCTGGGTGTGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS GCA 72 bp | GATGCTCATCACCACCAGAATGGCAAACAGGAGGACTaGAATGGCTCCCAGCAGAAGGCGTGTGGTGGTATC | + |
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Preference number: 6 (lower is better) Translates to: DAHHHQNGKQED*NGSQQKACGGI Trigger: GATACCACCACACGCCTTCTGCTGGGAGCCATTGCAGTCCTCCTGTTTGCCATTCTGGTGGTGATGAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | TCATCACCACCAGAATGGCAAACAGGAGGACTGCAATaGCTCCCAGCAGAAGGCGTGTGGTGGTATCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSPPEWQTGGLQ*LPAEGVWWYPP Trigger: TGGAGGATACCACCACACGCCTTCTGCTGGGAGCCATTGCAGTCCTCCTGTTTGCCATTCTGGTGGTGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | AGCCCTTGGAAGCCAGGATGCTCATCACCACCAGAATaGCAAACAGGAGGACTGCAATGGCTCCCAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SPWKPGCSSPPE*QTGGLQWLPAE Trigger: TTCTGCTGGGAGCCATTGCAGTCCTCCTGTTTGCCATTCTGGTGGTGATGAGCATCCTGGCTTCCAAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | GACACATTCCCCCATACCCGAGATAGTGAATGTGTCTaGGTCAAACGGGTCCCCATTGACCCAGTGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: DTFPHTRDSECV*VKRVPIDPVEV Trigger: GACTTCCACTGGGTCAATGGGGACCCGTTTGACCCAGACACATTCACTATCTCGGGTATGGGGGAATGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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| CDS CCA 72 bp | GTGAACTTGAACATAAATTCCAGTTCCTTCTGGCTTTaGATCACGGCCAGCGCCGCCTCGTGTGTATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VNLNINSSSFWL*ITASAASCVWQ Trigger: CTGCCATACACACGAGGCGGCGCTGGCCGTGATCCAAAGCCAGAAGGAACTGGAATTTATGTTCAAGTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114874.5 |
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